| Clone Name | rbaal30d23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | YO092_YEAST (Q12010) Uncharacterized protein YOL092W | 52 | 2e-06 | 2 | STM1_SCHPO (Q10482) Seven transmembrane protein 1 | 42 | 0.002 | 3 | YBZ7_YEAST (P38279) Hypothetical 33.5 kDa protein in MRPS9-YSW1 ... | 34 | 0.47 | 4 | PERN_IPOBA (O04796) Neutral peroxidase precursor (EC 1.11.1.7) (... | 30 | 6.9 | 5 | NODU_AZOCA (Q07759) Nodulation protein U (EC 2.1.3.-) | 30 | 9.0 |
|---|
>YO092_YEAST (Q12010) Uncharacterized protein YOL092W| Length = 308 Score = 52.0 bits (123), Expect = 2e-06 Identities = 25/59 (42%), Positives = 35/59 (59%) Frame = -1 Query: 683 LMFTFALVGNTTYVGSILVNSLDWARLRPNLPWLVDAGGCVLLDSFIIFQFLYFHYRKQ 507 L F FA +GNTT++ S++V SLDW L N WLV + G + +D I QF + K+ Sbjct: 246 LFFLFACLGNTTFIFSVIVISLDWKYLIMNASWLVGSIGTLFMDFVIFSQFFIYKRNKK 304
>STM1_SCHPO (Q10482) Seven transmembrane protein 1| Length = 271 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = -1 Query: 683 LMFTFALVGNTTYVGSILV-NSLDWARLR-PNLPWLVDAGGCVLLDSFIIFQFLYF--HY 516 + F A VGNT+Y SILV + D+ NLPW++ A + LD +I +QF+ + HY Sbjct: 212 IFFVLASVGNTSYAFSILVFPASDYLNYTYANLPWILGAFSTIFLDIYIFYQFIKYRNHY 271
>YBZ7_YEAST (P38279) Hypothetical 33.5 kDa protein in MRPS9-YSW1 intergenic| region Length = 296 Score = 33.9 bits (76), Expect = 0.47 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -1 Query: 683 LMFTFALVGNTTYVGSILVNSLDWARLRPNLPWLVDAGGCVLLDSFIIFQFLYF 522 L F FA +GNT+++ S+L S WL+ + G +L+D + QF + Sbjct: 242 LFFLFACLGNTSFIISVLSAS-----------WLIGSAGTLLMDFTVFIQFFLY 284
>PERN_IPOBA (O04796) Neutral peroxidase precursor (EC 1.11.1.7) (SwPN1)| Length = 348 Score = 30.0 bits (66), Expect = 6.9 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +1 Query: 358 PCLCSSARGVAIVQLSKKNAQSPCRCSPIS 447 P +S RG +++ +K+NAQ+ C +P+S Sbjct: 126 PANSNSVRGFSVIDQAKRNAQTKCADTPVS 155
>NODU_AZOCA (Q07759) Nodulation protein U (EC 2.1.3.-)| Length = 560 Score = 29.6 bits (65), Expect = 9.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 35 EHLDKIGLVPHKKNLQMSNAEPYLESGW 118 EH D+I L H+ Q S+ + Y+ GW Sbjct: 41 EHTDEIALALHRSGFQPSDIDEYIIDGW 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,368,872 Number of Sequences: 219361 Number of extensions: 2189267 Number of successful extensions: 4491 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4490 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)