| Clone Name | rbaal30b17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC129623.4| Homo sapiens 12 BAC CTD-2107C6 (Cal Tech Human BAC Library D) complete sequence Length = 133581 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 tatccatattgttcttcttaattt 108 ||||||||||||||||||| |||| Sbjct: 18972 tatccatattgttcttcttcattt 18949
>gb|AC091321.8| Homo sapiens, clone RP11-261I12, complete sequence Length = 45415 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 tatccatattgttcttcttaattt 108 ||||||||||||||||||| |||| Sbjct: 36439 tatccatattgttcttcttcattt 36416
>emb|BX649568.15| Zebrafish DNA sequence from clone CH211-122A20 in linkage group 18, complete sequence Length = 194885 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tctatcataatataccattc 51 |||||||||||||||||||| Sbjct: 39984 tctatcataatataccattc 40003
>gb|AC136004.10| Mus musculus chromosome 7, clone RP23-235M8, complete sequence Length = 185174 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ccatattgttcttcttaat 106 ||||||||||||||||||| Sbjct: 62814 ccatattgttcttcttaat 62832
>gb|AC158589.7| Mus musculus chromosome 5, clone RP24-388A6, complete sequence Length = 173087 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 ttcttcttaatttgcacct 114 ||||||||||||||||||| Sbjct: 130345 ttcttcttaatttgcacct 130363
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ccatattgttcttcttaat 106 ||||||||||||||||||| Sbjct: 147254 ccatattgttcttcttaat 147272
>gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete sequence Length = 97953 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 caacgtgctctctatcataatat 44 |||||| |||||||||||||||| Sbjct: 18467 caacgtactctctatcataatat 18489
>ref|NM_143315.1| Drosophila melanogaster CG5612-RA (CG5612), mRNA Length = 1505 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ttctcactctcaccctcac 67 ||||||||||||||||||| Sbjct: 1300 ttctcactctcaccctcac 1282
>gb|AY089668.1| Drosophila melanogaster RH40246 full insert cDNA Length = 1525 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ttctcactctcaccctcac 67 ||||||||||||||||||| Sbjct: 1301 ttctcactctcaccctcac 1283
>gb|AC084852.4| Homo sapiens chromosome 18, clone CTD-2145J2, complete sequence Length = 107640 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 atccatattgttcttctta 104 ||||||||||||||||||| Sbjct: 19886 atccatattgttcttctta 19904
>gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, complete sequence Length = 185700 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 ttgttcttcttaatttgca 111 ||||||||||||||||||| Sbjct: 128362 ttgttcttcttaatttgca 128344
>gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52X-53A, BAC clone BACR04J01, complete sequence Length = 182560 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 73 cgtatacgcaattatccatattg 95 |||||||||||||| |||||||| Sbjct: 14152 cgtatacgcaattagccatattg 14174
>gb|AC099005.1| Drosophila melanogaster, chromosome 2R, region 52B-52C, BAC clone BACR11I22, complete sequence Length = 173165 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 73 cgtatacgcaattatccatattg 95 |||||||||||||| |||||||| Sbjct: 87828 cgtatacgcaattagccatattg 87850
>gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-29a5, complete sequence Length = 124676 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 caacgtgctctctatcataatat 44 |||||| |||||||||||||||| Sbjct: 29757 caacgtactctctatcataatat 29779
>gb|AC007817.7|AC007817 Drosophila melanogaster, chromosome 3R, region 98A-98B, BAC clone BACR15D01, complete sequence Length = 180499 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 ttctcactctcaccctcac 67 ||||||||||||||||||| Sbjct: 138201 ttctcactctcaccctcac 138219
>gb|AC009952.4|AC009952 Homo sapiens BAC clone RP11-175I4 from Y, complete sequence Length = 148058 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 ctcactctcaccctcacct 69 ||||||||||||||||||| Sbjct: 96935 ctcactctcaccctcacct 96953
>gb|AC016711.9| Homo sapiens BAC clone RP11-249O24 from 2, complete sequence Length = 122880 Score = 38.2 bits (19), Expect = 6.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 30 tctctatcataatataccattctcact 56 |||||||||||| ||||||||| |||| Sbjct: 68418 tctctatcataacataccattcacact 68444
>gb|AE003761.2| Drosophila melanogaster chromosome 3R, section 99 of 118 of the complete sequence Length = 224910 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 ttctcactctcaccctcac 67 ||||||||||||||||||| Sbjct: 187387 ttctcactctcaccctcac 187405
>gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41 of 73 of the complete sequence Length = 262533 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 73 cgtatacgcaattatccatattg 95 |||||||||||||| |||||||| Sbjct: 25720 cgtatacgcaattagccatattg 25742
>gb|AC005474.1|AC005474 Drosophila melanogaster, chromosome 2R, region 52C1-52C2, P1 clone DS08438, complete sequence Length = 74901 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 73 cgtatacgcaattatccatattg 95 |||||||||||||| |||||||| Sbjct: 28084 cgtatacgcaattagccatattg 28106
>gb|AC102030.18| Mus musculus chromosome 5, clone RP23-7J3, complete sequence Length = 150101 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 ttcttcttaatttgcacct 114 ||||||||||||||||||| Sbjct: 47055 ttcttcttaatttgcacct 47073 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 978,172 Number of Sequences: 3902068 Number of extensions: 978172 Number of successful extensions: 68546 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68506 Number of HSP's gapped (non-prelim): 40 length of query: 142 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 121 effective length of database: 17,151,101,840 effective search space: 2075283322640 effective search space used: 2075283322640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)