ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal30b06 |
|---|---|
| Clone Library Name | barley_pub |
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 84.0 bits (206), Expect = 4e-16 Identities = 58/204 (28%), Positives = 96/204 (47%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 L Y +L CLLT++ +P S ++LF+S + ++E + G+S WW N + Sbjct: 814 LAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQF 873 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A + +LK L +T F VT K + D G L+ F + Sbjct: 874 WVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGE--------LYAFKWTTLL 925 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSRGK 144 IP T + ++NIV + G A+ GP G+ W+++ +PF++GL+ R + Sbjct: 926 IPPTTVLIINIVGVVAGISDAI--NNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGR-Q 982 Query: 143 HGIPWSVKVKAGLIVAAFVHLCTR 72 + P V + + L+ + F L R Sbjct: 983 NRTPTIVVIWSVLLASIFSLLWVR 1006
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 82.0 bits (201), Expect = 2e-15 Identities = 61/204 (29%), Positives = 98/204 (48%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 L Y +L FCL+TN +P S+ + LF S + ++E K ++ WW N + Sbjct: 854 LAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQF 913 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A +LK +T F VT K +S DG D A+ L+ F + Sbjct: 914 WVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSK-ASDEDG----DFAE--LYVFKWTSLL 966 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSRGK 144 IP T + ++N+V + G A+ + GP +G+ + W+V +PF++GL+ R + Sbjct: 967 IPPTTILLVNLVGIVAGVSYAI--NSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGR-Q 1023 Query: 143 HGIPWSVKVKAGLIVAAFVHLCTR 72 + P V V + L+ + F L R Sbjct: 1024 NRTPTIVIVWSALLASIFSLLWVR 1047
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 82.0 bits (201), Expect = 2e-15 Identities = 64/204 (31%), Positives = 97/204 (47%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 L Y L CL TNQ +P S+ ++LFLS ++E + G+ WW N + Sbjct: 852 LMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQF 911 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A ILK L +T F VT K +S DG D A+ L+ F + Sbjct: 912 WVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSK-ASDEDG----DFAE--LYLFKWTTLL 964 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSRGK 144 IP T L ++N+V + G A+ + GP G+ W+++ +PF++GL+ R + Sbjct: 965 IPPTTLLIVNLVGVVAGVSYAI--NSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGR-Q 1021 Query: 143 HGIPWSVKVKAGLIVAAFVHLCTR 72 + P V V + L+ + F L R Sbjct: 1022 NRTPTIVVVWSVLLASIFSLLWVR 1045
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 80.5 bits (197), Expect = 5e-15 Identities = 59/204 (28%), Positives = 100/204 (49%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 + Y +L FCL+T++ +P S+ + LF+S + ++E + G+S WW N + Sbjct: 867 IAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQF 926 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A +LK L +T F VT K ++ DG D A+ L+ F + Sbjct: 927 WVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ATDEDG----DFAE--LYIFKWTALL 979 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSRGK 144 IP T + ++N++ + G AV + GP G+ W++ +PF++GL+ R + Sbjct: 980 IPPTTVLLVNLIGIVAGVSYAV--NSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGR-Q 1036 Query: 143 HGIPWSVKVKAGLIVAAFVHLCTR 72 + P V V + L+ + F L R Sbjct: 1037 NRTPTIVIVWSVLLASIFSLLWVR 1060
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 75.1 bits (183), Expect = 2e-13 Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 2/180 (1%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 L Y + CLLT + +PT ++ +ALFLS ++E + G+S W N + Sbjct: 835 LAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQF 894 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADP--GLFTFDSAP 330 I SA L A +LK L +T F VT K +S DEAD L+ F Sbjct: 895 WVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGAS--------DEADEFGDLYLFKWTT 946 Query: 329 VFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSR 150 + IP T L +LN+V + G A+ GP G+ W+++ +PF++GL+ R Sbjct: 947 LLIPPTTLIILNMVGVVAGVSDAI--NNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGR 1004
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 73.2 bits (178), Expect = 7e-13 Identities = 49/178 (27%), Positives = 82/178 (46%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 + Y L CLLT + +P S+ + + +F+S + ++E + G+ WW N + Sbjct: 871 IVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQF 930 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I AS+ L A +LK L T F VT K A D A L+ F + Sbjct: 931 WVIGGASSHLFALFQGLLKVLAGVNTNFTVTSK--------AADDGAFSELYIFKWTTLL 982 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSR 150 IP T L ++NI+ + VG A+ + GP G W+++ +PF++G++ + Sbjct: 983 IPPTTLLIINIIGVIVGVSDAI--SNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGK 1038
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 73.2 bits (178), Expect = 7e-13 Identities = 52/178 (29%), Positives = 80/178 (44%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 L Y L CLLT + +P S+ + +ALF S + ++E + + WW N + Sbjct: 857 LVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQF 916 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A +LK L ET F VT K A D L+ F + Sbjct: 917 WVIGGVSAHLFALFQGLLKVLAGVETNFTVTSK--------AADDGEFSELYIFKWTSLL 968 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSR 150 IP T L ++N++ + VG A+ + GP G W++L +PF++GL+ + Sbjct: 969 IPPTTLLIINVIGVIVGISDAI--SNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGK 1024
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 71.6 bits (174), Expect = 2e-12 Identities = 50/178 (28%), Positives = 81/178 (45%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 + Y L CLLT + +PT S+ + + LF+S + ++E + G+S W N + Sbjct: 771 VAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQF 830 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A LK L +T F VT K + + G L+ + Sbjct: 831 WVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGE--------LYIVKWTTLL 882 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSR 150 IP T+L ++N+V + G A+ GP G+ W++L +PF++GL+ R Sbjct: 883 IPPTSLLIINLVGVVAGFSDAL--NKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGR 938
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 70.9 bits (172), Expect = 4e-12 Identities = 50/178 (28%), Positives = 82/178 (46%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 + Y L CLLT + +P S+ + +ALF S I ++E + + WW N + Sbjct: 872 IVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQF 931 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I SA L A +LK L +T F VT S +D G +D L+ F + Sbjct: 932 WVIGGVSAHLFALFQGLLKVLAGVDTNFTVT---SKAADDGEFSD-----LYLFKWTSLL 983 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSR 150 IP L ++N++ + VG A+ + GP G W+++ +PF++GL+ + Sbjct: 984 IPPMTLLIINVIGVIVGVSDAI--SNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGK 1039
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 69.3 bits (168), Expect = 1e-11 Identities = 54/204 (26%), Positives = 89/204 (43%) Frame = -3 Query: 683 LCYALLGPFCLLTNQSFLPTASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRM 504 L Y L CLLT + +P S+ + + +F+S + ++E + + WW N + Sbjct: 875 LVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQF 934 Query: 503 QRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVF 324 I S+ L A +LK L T F VT K A D L+ F + Sbjct: 935 WVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSK--------AADDGEFSELYIFKWTSLL 986 Query: 323 IPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVRGLVSRGK 144 IP T L ++NIV + VG A+ GP G W+++ +PF++GL+ + + Sbjct: 987 IPPTTLLIINIVGVIVGVSDAI--NNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK-Q 1043 Query: 143 HGIPWSVKVKAGLIVAAFVHLCTR 72 +P + V + L+ + L R Sbjct: 1044 DRVPTIILVWSILLASILTLLWVR 1067
>UL03_HHV11 (P10187) Protein UL3| Length = 235 Score = 33.9 bits (76), Expect = 0.49 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = +3 Query: 87 HERSHNQTSLHLDAPRDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGA 266 HE + + D+ R + ++ D+P H PE + ATA S RA DDG Sbjct: 39 HESGISPDTTPADSIRGAAVASPDQPLHGGPERE---ATAPSFSPTRA--------DDGP 87 Query: 267 PCPDG 281 PC DG Sbjct: 88 PCTDG 92
>COX10_GIBZE (Q4I5G1) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 507 Score = 32.3 bits (72), Expect = 1.4 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 16/144 (11%) Frame = -3 Query: 635 FLPTASDEGFRIPVALFLSYHIYHLM--------EYKECGLSARAWWNNHRMQRITSASA 480 F S G + L ++ H M EYK+ GL AW N R R+ + Sbjct: 332 FASDGSSIGGWVMAGLLFAWQFPHFMALSWPIREEYKKAGLRMLAWTNPARNGRVALRYS 391 Query: 479 WLLAFLTVILKTLGLSETVFEVTR--------KESSTSDGGAGTDEADPGLFTFDSAPVF 324 ++ L + L G++E F VT +ES G + GLF + S Sbjct: 392 FVFIPLCLSLCAAGVTEWSFAVTSFPINAWLIRESVRFWRYEGNKGSARGLF-WASVWHL 450 Query: 323 IPVTALSVLNIVALAVGAWRAVIG 252 V L++L+ + WR+V G Sbjct: 451 PGVMILALLHKKGMWTRVWRSVFG 474
>COX10_NEUCR (Q7S5E7) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 535 Score = 32.0 bits (71), Expect = 1.9 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -3 Query: 608 FRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAF--LTVILKTLGL 435 ++ P + LS+ I H EYK GL AW N R R+ A + LAF L V L G+ Sbjct: 380 WQFPHFMPLSWGIRH--EYKAAGLRMLAWTNPARNGRV--ALRYSLAFIPLCVGLSATGV 435 Query: 434 SETVFEVT 411 +E F VT Sbjct: 436 TEWSFAVT 443
>MEP2_YEAST (P41948) Ammonium transporter MEP2| Length = 499 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = -3 Query: 524 WWNNHRMQ------RITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEA 363 W N+H Q I +A AW + +++L T+ + S + GTD A Sbjct: 382 WINHHYKQVGYQLAGICAALAWTVTVTSILLLTMN----AIPFLKLRLSADEEELGTDAA 437 Query: 362 DPGLFTFDSAPVFIP 318 G FT++ + +IP Sbjct: 438 QIGEFTYEESTAYIP 452
>COX10_MAGGR (P0C150) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 552 Score = 32.0 bits (71), Expect = 1.9 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Frame = -3 Query: 629 PTASDEGFRIPVALFLSYHIYHLM--------EYKECGLSARAWWNNHRMQRITSASAWL 474 P S G + AL ++ H M EY+ GL AW N R R+ + Sbjct: 382 PDGSSAGGWLFAALLFTWQFPHFMALSWGVRDEYRAAGLRMLAWTNPARNARVALRYGLV 441 Query: 473 LAFLTVILKTLGLSETVFEVT 411 L V L +G++E F VT Sbjct: 442 FVPLCVGLCAVGVTEWSFAVT 462
>CAC1D_HUMAN (Q01668) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) Length = 2161 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Frame = -3 Query: 494 TSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPV 315 +SAS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 649 SSASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ---- 693 Query: 314 TALSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 180 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 694 ---ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 736
>NCKX5_BRARE (Q49SH1) Sodium/potassium/calcium exchanger 5 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 5) (Solute carrier family 24 member 5) (Protein golden) Length = 513 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = -3 Query: 530 RAWWNNHRMQRITSASAWLLAF-------LTVILKTLGLSETVFEVTRKESSTS 390 R +W N M ++ W+ AF +T++ +TLG+ +TV +T + TS Sbjct: 340 RPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIVGETLGIPDTVMGMTLLAAGTS 393
>DAF2_MOUSE (Q61476) Complement decay-accelerating factor transmembrane isoform| precursor (DAF-TM) (CD55 antigen) Length = 407 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 135 DSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDG 263 +S+ +P D+P+ ++P PAT HE T D+ + G Sbjct: 319 ESVPNPGDQPTPQKPSTVKVPATQHEPDTTTRTSTDKGESNSG 361
>CBRB_DICD3 (Q47085) Achromobactin transport system permease protein cbrB| Length = 340 Score = 30.8 bits (68), Expect = 4.1 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -3 Query: 365 ADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTA 246 A PGLF ++ +F + +S+ VA++V W A G A Sbjct: 96 ASPGLFGINAGAMFFLIVCVSLFPKVAMSVWLWSAFAGAA 135
>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)| (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX) Length = 365 Score = 30.4 bits (67), Expect = 5.4 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Frame = +3 Query: 57 PGRLVPCAEVHERSHNQTSLHLDAP----RDSMLSPADKPSHERPEAQHHPATAHELSDA 224 PGR P A +RS + ++ D+P D SPA PS + TAH+L + Sbjct: 122 PGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPA--PSKRKKRRHRTVFTAHQLEEL 179 Query: 225 RATMNDRRSPD 257 ++ PD Sbjct: 180 EKAFSEAHYPD 190
>TDT_MONDO (O02789) DNA nucleotidylexotransferase (EC 2.7.7.31) (Terminal| addition enzyme) (Terminal deoxynucleotidyltransferase) (TDT) (Terminal transferase) Length = 518 Score = 30.4 bits (67), Expect = 5.4 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 5/97 (5%) Frame = -3 Query: 647 TNQSFLPT-ASDEGFRIPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSAS---- 483 T ++FL A +GFR+ L S + H++ G AW H+M++ T Sbjct: 47 TRRTFLTDLARKKGFRVENEL--SNSVTHIVAENNSGSDVLAWLKTHKMEKTTQFELLDI 104 Query: 482 AWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGT 372 +WL+ + V + +R +S+ D AGT Sbjct: 105 SWLIECMKVGKPVDTKGKYQLMESRVDSANPDPTAGT 141
>CSTN3_MOUSE (Q99JH7) Calsyntenin-3 precursor| Length = 956 Score = 30.4 bits (67), Expect = 5.4 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = -3 Query: 518 NNHRMQRITSASAWLLAFLT---VILKTLGLSETVFEVTRKESSTSD-GGAGTDEADPGL 351 ++HR + SA+ ++ V++ LGL + + R+ S T GA TD DP L Sbjct: 837 SSHRNSMVPSAATLIIVVCVGFLVLMVILGLVR-IHSLHRRVSGTGGPSGASTDPKDPDL 895 Query: 350 FTFDSAPVFI 321 F DSA I Sbjct: 896 FWDDSALTII 905
>GNAS_HOMAM (O16118) Guanine nucleotide-binding protein G(s), alpha subunit| (Adenylate cyclase-stimulating G alpha protein) Length = 379 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -3 Query: 446 TLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIV 288 TLG+ ET F+V + D G DE + F+ I VTA S N+V Sbjct: 189 TLGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV 241
>CAC1D_MESAU (Q99244) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide isoform 2) Length = 1610 Score = 29.6 bits (65), Expect = 9.2 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -3 Query: 488 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 309 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 650 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 692 Query: 308 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 180 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 693 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 735
>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (CHCACHA1D) Length = 2190 Score = 29.6 bits (65), Expect = 9.2 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -3 Query: 488 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 309 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 672 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 714 Query: 308 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 180 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 715 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 757
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic| kidney disease protein 1) Length = 4303 Score = 29.6 bits (65), Expect = 9.2 Identities = 24/71 (33%), Positives = 28/71 (39%) Frame = -3 Query: 416 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 237 VT DG A D A P P VTA+ LA+GA A++GT V Sbjct: 300 VTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAV-------LALGAGSALLGTDVQV 352 Query: 236 HGGPGIGEFVC 204 P E VC Sbjct: 353 EAAPAALELVC 363
>IF2_NEIG1 (Q5F797) Translation initiation factor IF-2| Length = 943 Score = 29.6 bits (65), Expect = 9.2 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +3 Query: 132 RDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGAPCPDGEGHNVQH*ER 311 R PA+KP P ++ P ++ A+A DRR+ DD + +G + Sbjct: 268 RQRPAKPAEKPQAAAPAVENKP-----VNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRD 322 Query: 312 RHRDENG 332 R+ NG Sbjct: 323 RNNARNG 329
>GP160_MOUSE (Q3U3F9) Probable G-protein coupled receptor 160| Length = 336 Score = 29.6 bits (65), Expect = 9.2 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Frame = -3 Query: 680 CYAL-LGPFCLLTNQSFLPTASDEGFRIPVALFLSYHI----------YHLMEYKECGLS 534 C++L L LL N S L D F + F YHI Y + Y C L+ Sbjct: 59 CFSLALVDLLLLVNISILTYFRD--FVVLGIRFTRYHICLLTQIISFTYGFLHYPVCSLA 116 Query: 533 ARAWWNN-HRMQRITSASAWLLAFLTVIL 450 +W N R + +S LL FLTVIL Sbjct: 117 CIDYWCNLSRASKQSSRWQKLLYFLTVIL 145
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 29.6 bits (65), Expect = 9.2 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -3 Query: 488 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 309 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 710 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 752 Query: 308 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 180 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 753 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 795
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 126 APRDSMLSPADK-PSHERPEAQHHPATAHELSDARATMNDRRSPDD 260 AP+ +LSP+ PSH RP A P+T + AT + +R +D Sbjct: 115 APQHLLLSPSRAGPSHPRPTAVPGPSTRQNQAQWEATRHQQRLHND 160
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +3 Query: 111 SLHLDAPRDSMLSPADKPSHER--------PEAQHHPATAHELSDARATMNDRR 248 SLHL +P S L+PA PS R EA P L A A M D R Sbjct: 297 SLHLQSPHSSPLAPAAAPSDPRLQDLKAREAEAWEEPTELLGLPSALAGMQDLR 350
>Y3480_MYCTU (O06343) Hypothetical UPF0089 protein Rv3480c/MT3584| Length = 497 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -2 Query: 585 LELPHIPLDGVQGVRALCPRLVEQPQDATHHLGLRLAPRLPHRDPQDTR 439 +++ H +DG G + L L P D TH L + P R P DT+ Sbjct: 139 IKMHHSLIDGYTGQKMLARSLSTDPHDTTHPLFFNIP--TPGRSPADTQ 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,435,621 Number of Sequences: 219361 Number of extensions: 2005439 Number of successful extensions: 6869 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 6577 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6848 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
