| Clone Name | rbaal7m14 |
|---|---|
| Clone Library Name | barley_pub |
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/33 (54%), Positives = 22/33 (66%) Frame = -3 Query: 391 SDVVRAKAELWREKARAAAAVGGSSERNLRAFV 293 + R A WR++ARAA A GGSS+RNL FV Sbjct: 429 ASAARKAAGEWRDRARAAVAPGGSSDRNLDEFV 461
>PEX2_YEAST (P32800) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal| protein PAS5) (Protein CRT1) Length = 271 Score = 36.2 bits (82), Expect = 0.019 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 5/43 (11%) Frame = +3 Query: 285 CPVTNALRFLSDEPPTAAA-----ARAFSLHSSALARTTSEVA 398 C VTN LRFL+ E P A A RAF++HS+ L R S +A Sbjct: 122 CDVTNFLRFLAAEGPNARAFLSPLYRAFNVHSTRLIRDGSAIA 164
>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid| glucosyltransferase) (Limonoid GTase) (LGTase) Length = 511 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = -3 Query: 361 WREKARAAAAVGGSSERNLRAFV 293 W+++A A A GGSS+RN++AFV Sbjct: 439 WKKEAEEAVADGGSSDRNIQAFV 461
>NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 precursor (NEL-like| protein 1) (Nel-related protein 1) Length = 810 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Frame = +1 Query: 115 IIYDSEEVRIESSRLVSCTS----------SCQALNCYSYMLSIWFAGS-CSACKPAC 255 ++Y ++ ++ +CT SC LNC L + AG C C+P C Sbjct: 278 LLYRDQDSWVDGDHCRNCTCKSGAVECRRMSCPPLNCSPDSLPVHIAGQCCKVCRPKC 335
>YAGH_ECOLI (P77713) Putative beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan| xylohydrolase) (Xylan 1,4-beta-xylosidase) Length = 536 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 191 TATPICCRFGSQDHAAHASRHAGW--LVAGEG 280 T TP+C G AH RHAGW L+A EG Sbjct: 178 TGTPLCYTEG-----AHLYRHAGWYYLMAAEG 204
>GCSH_TROWT (P64215) Glycine cleavage system H protein| Length = 121 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/51 (29%), Positives = 32/51 (62%) Frame = +1 Query: 25 QNFTVRRNECLGKMRTAFDLSQVAATMSNRIIYDSEEVRIESSRLVSCTSS 177 Q+ + + EC+G++ + +S++ + +S R+I +E+V I S L++ SS Sbjct: 46 QDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDV-ISSPGLLNSDSS 95
>GCSH_TROW8 (P64216) Glycine cleavage system H protein| Length = 121 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/51 (29%), Positives = 32/51 (62%) Frame = +1 Query: 25 QNFTVRRNECLGKMRTAFDLSQVAATMSNRIIYDSEEVRIESSRLVSCTSS 177 Q+ + + EC+G++ + +S++ + +S R+I +E+V I S L++ SS Sbjct: 46 QDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDV-ISSPGLLNSDSS 95
>ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Secretory| component p85) Length = 540 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = -1 Query: 225 CEPNRQHIGVAV*RLAGRRTRDETRGLDPYLFAVVNNS-IRHCSCYLGKIECRSHLAEAF 49 C PNRQH+ L TR + F + S HC + ++EC + E Sbjct: 181 CLPNRQHVVYGPWNLPQSSYSHLTRQGETLNFLEIGYSRCCHCRSHTNRLECAKLVWEEA 240 Query: 48 VSPYCK 31 +S +C+ Sbjct: 241 MSRFCE 246
>VIE2_BHV4D (Q02479) Immediate-early protein 2 (IE2)| Length = 552 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%) Frame = +3 Query: 183 SAKLLLLYAVDL---VRRIMQRMQAGMP----AG*LPARATCPVTNALRFLSDEPPTAAA 341 SA LL L A +L V+ + + G+P AG +P R CPV + SD P + Sbjct: 363 SASLLSLQAENLPTSVQNSVAQETTGLPPQVPAGEMPPRGNCPVEDHGLLNSDAPDDLSG 422 Query: 342 ARAFSLHSS 368 + L +S Sbjct: 423 KGDYDLFTS 431
>NELL1_RAT (Q62919) Protein kinase C-binding protein NELL1 precursor (NEL-like| protein 1) Length = 810 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Frame = +1 Query: 115 IIYDSEEVRIESSRLVSCTS----------SCQALNCYSYMLSIWFAGS-CSACKPAC 255 ++Y ++ ++ +CT SC LNC L + +G C C+P C Sbjct: 278 LLYRDQDSWVDGDNCGNCTCKSGAVECRRMSCPPLNCSPDSLPVHISGQCCKVCRPKC 335
>CC051_HUMAN (O76042) Protein C3orf51 (PO42)| Length = 201 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -1 Query: 102 CSCYLGKIECRSHLAEAFVSPYCKIL 25 CS LGK+ C HL V +C IL Sbjct: 24 CSVGLGKVHCSCHLPNPRVLRHCDIL 49
>NTCP_HUMAN (Q14973) Sodium/bile acid cotransporter (Na(+)/bile acid| cotransporter) (Na(+)/taurocholate transport protein) (Sodium/taurocholate cotransporting polypeptide) (Solute carrier family 10 member 1) Length = 349 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -3 Query: 394 TSDVVRAKAELWREKARAAAAVGGSSERNLRAFVTGQV 281 T + + KA LW+ K A A V L AFV G+V Sbjct: 45 TMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKV 82
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 166 CTSSCQALNCYSYMLSIWFAGSCSACKPACRLASC 270 C ++C C+ ++ S S C+PAC ++SC Sbjct: 14 CRTTCCRTTCWK-PTTVTTCSSTSCCQPACCVSSC 47
>TLPH_ARATH (P50699) Thaumatin-like protein precursor| Length = 243 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 154 RLVSCTSSCQALNCYSYMLSIWFAGSCSACKP 249 R+V+C S+C A N Y + F G+ +CKP Sbjct: 170 RVVACKSACSAFNSPQYCCTGLF-GNPQSCKP 200 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,884,678 Number of Sequences: 219361 Number of extensions: 771169 Number of successful extensions: 2373 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2271 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2365 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)