ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7m14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (E... 38 0.007
2PEX2_YEAST (P32800) Peroxisomal biogenesis factor 2 (Peroxin-2) ... 36 0.019
3LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.21... 33 0.21
4NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 prec... 28 4.0
5YAGH_ECOLI (P77713) Putative beta-xylosidase (EC 3.2.1.37) (1,4-... 28 4.0
6GCSH_TROWT (P64215) Glycine cleavage system H protein 28 4.0
7GCSH_TROW8 (P64216) Glycine cleavage system H protein 28 4.0
8ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Se... 28 5.2
9VIE2_BHV4D (Q02479) Immediate-early protein 2 (IE2) 27 8.9
10NELL1_RAT (Q62919) Protein kinase C-binding protein NELL1 precur... 27 8.9
11CC051_HUMAN (O76042) Protein C3orf51 (PO42) 27 8.9
12NTCP_HUMAN (Q14973) Sodium/bile acid cotransporter (Na(+)/bile a... 27 8.9
13KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-ass... 27 8.9
14TLPH_ARATH (P50699) Thaumatin-like protein precursor 27 8.9

>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)|
           (IAA-Glu synthetase) ((Uridine
           5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl
           transferase)
          Length = 471

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = -3

Query: 391 SDVVRAKAELWREKARAAAAVGGSSERNLRAFV 293
           +   R  A  WR++ARAA A GGSS+RNL  FV
Sbjct: 429 ASAARKAAGEWRDRARAAVAPGGSSDRNLDEFV 461



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>PEX2_YEAST (P32800) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal|
           protein PAS5) (Protein CRT1)
          Length = 271

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
 Frame = +3

Query: 285 CPVTNALRFLSDEPPTAAA-----ARAFSLHSSALARTTSEVA 398
           C VTN LRFL+ E P A A      RAF++HS+ L R  S +A
Sbjct: 122 CDVTNFLRFLAAEGPNARAFLSPLYRAFNVHSTRLIRDGSAIA 164



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>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid|
           glucosyltransferase) (Limonoid GTase) (LGTase)
          Length = 511

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -3

Query: 361 WREKARAAAAVGGSSERNLRAFV 293
           W+++A  A A GGSS+RN++AFV
Sbjct: 439 WKKEAEEAVADGGSSDRNIQAFV 461



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>NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 precursor (NEL-like|
           protein 1) (Nel-related protein 1)
          Length = 810

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 11/58 (18%)
 Frame = +1

Query: 115 IIYDSEEVRIESSRLVSCTS----------SCQALNCYSYMLSIWFAGS-CSACKPAC 255
           ++Y  ++  ++     +CT           SC  LNC    L +  AG  C  C+P C
Sbjct: 278 LLYRDQDSWVDGDHCRNCTCKSGAVECRRMSCPPLNCSPDSLPVHIAGQCCKVCRPKC 335



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>YAGH_ECOLI (P77713) Putative beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan|
           xylohydrolase) (Xylan 1,4-beta-xylosidase)
          Length = 536

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 191 TATPICCRFGSQDHAAHASRHAGW--LVAGEG 280
           T TP+C   G     AH  RHAGW  L+A EG
Sbjct: 178 TGTPLCYTEG-----AHLYRHAGWYYLMAAEG 204



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>GCSH_TROWT (P64215) Glycine cleavage system H protein|
          Length = 121

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/51 (29%), Positives = 32/51 (62%)
 Frame = +1

Query: 25  QNFTVRRNECLGKMRTAFDLSQVAATMSNRIIYDSEEVRIESSRLVSCTSS 177
           Q+  + + EC+G++ +   +S++ + +S R+I  +E+V I S  L++  SS
Sbjct: 46  QDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDV-ISSPGLLNSDSS 95



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>GCSH_TROW8 (P64216) Glycine cleavage system H protein|
          Length = 121

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/51 (29%), Positives = 32/51 (62%)
 Frame = +1

Query: 25  QNFTVRRNECLGKMRTAFDLSQVAATMSNRIIYDSEEVRIESSRLVSCTSS 177
           Q+  + + EC+G++ +   +S++ + +S R+I  +E+V I S  L++  SS
Sbjct: 46  QDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDV-ISSPGLLNSDSS 95



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>ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Secretory|
           component p85)
          Length = 540

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -1

Query: 225 CEPNRQHIGVAV*RLAGRRTRDETRGLDPYLFAVVNNS-IRHCSCYLGKIECRSHLAEAF 49
           C PNRQH+      L        TR  +   F  +  S   HC  +  ++EC   + E  
Sbjct: 181 CLPNRQHVVYGPWNLPQSSYSHLTRQGETLNFLEIGYSRCCHCRSHTNRLECAKLVWEEA 240

Query: 48  VSPYCK 31
           +S +C+
Sbjct: 241 MSRFCE 246



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>VIE2_BHV4D (Q02479) Immediate-early protein 2 (IE2)|
          Length = 552

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
 Frame = +3

Query: 183 SAKLLLLYAVDL---VRRIMQRMQAGMP----AG*LPARATCPVTNALRFLSDEPPTAAA 341
           SA LL L A +L   V+  + +   G+P    AG +P R  CPV +     SD P   + 
Sbjct: 363 SASLLSLQAENLPTSVQNSVAQETTGLPPQVPAGEMPPRGNCPVEDHGLLNSDAPDDLSG 422

Query: 342 ARAFSLHSS 368
              + L +S
Sbjct: 423 KGDYDLFTS 431



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>NELL1_RAT (Q62919) Protein kinase C-binding protein NELL1 precursor (NEL-like|
           protein 1)
          Length = 810

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 11/58 (18%)
 Frame = +1

Query: 115 IIYDSEEVRIESSRLVSCTS----------SCQALNCYSYMLSIWFAGS-CSACKPAC 255
           ++Y  ++  ++     +CT           SC  LNC    L +  +G  C  C+P C
Sbjct: 278 LLYRDQDSWVDGDNCGNCTCKSGAVECRRMSCPPLNCSPDSLPVHISGQCCKVCRPKC 335



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>CC051_HUMAN (O76042) Protein C3orf51 (PO42)|
          Length = 201

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 102 CSCYLGKIECRSHLAEAFVSPYCKIL 25
           CS  LGK+ C  HL    V  +C IL
Sbjct: 24  CSVGLGKVHCSCHLPNPRVLRHCDIL 49



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>NTCP_HUMAN (Q14973) Sodium/bile acid cotransporter (Na(+)/bile acid|
           cotransporter) (Na(+)/taurocholate transport protein)
           (Sodium/taurocholate cotransporting polypeptide) (Solute
           carrier family 10 member 1)
          Length = 349

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 394 TSDVVRAKAELWREKARAAAAVGGSSERNLRAFVTGQV 281
           T +  + KA LW+ K  A A V       L AFV G+V
Sbjct: 45  TMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKV 82



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>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 166 CTSSCQALNCYSYMLSIWFAGSCSACKPACRLASC 270
           C ++C    C+    ++    S S C+PAC ++SC
Sbjct: 14  CRTTCCRTTCWK-PTTVTTCSSTSCCQPACCVSSC 47



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>TLPH_ARATH (P50699) Thaumatin-like protein precursor|
          Length = 243

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 154 RLVSCTSSCQALNCYSYMLSIWFAGSCSACKP 249
           R+V+C S+C A N   Y  +  F G+  +CKP
Sbjct: 170 RVVACKSACSAFNSPQYCCTGLF-GNPQSCKP 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,884,678
Number of Sequences: 219361
Number of extensions: 771169
Number of successful extensions: 2373
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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