>TPSNR_PONPY (Q5R8H1) Tapasin-related protein precursor (TAPASIN-R)|
           (Tapasin-like) (TAP-binding protein-related protein)
           (TAPBP-R) (TAP-binding protein-like)
          Length = 468

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 117 RGPL-YGWRKGAADAVTSGARSTPGRSXMPRNASM 218
           RG L Y W  G   AV  GA   P +  M RNAS+
Sbjct: 234 RGQLVYSWTTGQGQAVRKGATLEPEQLGMARNASL 268

>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2386

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 111  PPRGPLYGWRKGAADAVTSGARSTPGRSXMPR 206
            PP  P  G  +GA D   +GA S PG    PR
Sbjct: 2075 PPPPPADGGPRGAGDPGGAGASSGPGAPAEPR 2106

>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein|
          Length = 417

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -3

Query: 181 VERAPEVTASAAPFRQPYNGPRGGNRA*VPPHRRRTPIMLYKFLLDLL 38
           V  A      + PFR+PY+ PR G     PP   R P +L  F + +L
Sbjct: 112 VREAAAQRRPSRPFRKPYSHPRNGPLRNGPP---RAPPLLKLFDISIL 156

>MSC3_CANGA (Q6FX33) Meiotic sister-chromatid recombination protein 3|
          Length = 834

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 102 ARLPPRGPLYGWRKGAADAVTSGARSTPGRSXMPRNAS 215
           AR PP G  Y  R   A ++TS +R         R AS
Sbjct: 78  ARQPPAGRTYSLRSDRASSITSNSRRPAAGKAQVRRAS 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,507,767
Number of Sequences: 219361
Number of extensions: 404356
Number of successful extensions: 1218
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)