>gb|AC073525.25| Homo sapiens 12 BAC RP11-81K13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142475

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 27    caatctaggatctgaaaattcag 49
             |||||||||||||||||||||||
Sbjct: 67593 caatctaggatctgaaaattcag 67615

>gb|AY223080.1| Schistosoma japonicum clone ZZD1296 mRNA sequence
          Length = 1408

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 542 tttttgacgagcagcatcttcaacga 567
           ||||||||||||||||||||| ||||
Sbjct: 687 tttttgacgagcagcatcttccacga 662

>emb|CR361560.10| Zebrafish DNA sequence from clone CH211-122G18 in linkage group 24,
            complete sequence
          Length = 184660

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 131  acactggaagatatcggacttgaat 155
            ||||||||||||||| |||||||||
Sbjct: 9593 acactggaagatatcagacttgaat 9617

>ref|XM_679268.1| PREDICTED: Danio rerio similar to zinc finger homeodomain 4
            (LOC556453), mRNA
          Length = 7311

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 131  acactggaagatatcggacttgaat 155
            ||||||||||||||| |||||||||
Sbjct: 5836 acactggaagatatcagacttgaat 5860

>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence
          Length = 216692

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 25     aacaatctaggatctgaaaat 45
              |||||||||||||||||||||
Sbjct: 136224 aacaatctaggatctgaaaat 136204

>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence
          Length = 190474

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   gagaacaaagagcatgaaga 283
             ||||||||||||||||||||
Sbjct: 71659 gagaacaaagagcatgaaga 71640

>gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome 10, complete sequence
          Length = 96290

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   gcagtttctggagactctcc 445
             ||||||||||||||||||||
Sbjct: 48551 gcagtttctggagactctcc 48532

>ref|NM_001031319.1| Gallus gallus protein kinase C, iota (PRKCI), mRNA
          Length = 4333

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  acagtgaggaaagcagaata 200
            ||||||||||||||||||||
Sbjct: 2331 acagtgaggaaagcagaata 2350

>ref|XM_711610.1| Candida albicans SC5314 hypothetical protein (CaO19_3393), mRNA
          Length = 1725

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  aatcaaaccttaccaatttg 516
            ||||||||||||||||||||
Sbjct: 1338 aatcaaaccttaccaatttg 1357

>ref|XM_711550.1| Candida albicans SC5314 hypothetical protein (CaO19_10896), mRNA
          Length = 1725

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  aatcaaaccttaccaatttg 516
            ||||||||||||||||||||
Sbjct: 1338 aatcaaaccttaccaatttg 1357

>ref|XR_003022.1| PREDICTED: Mus musculus similar to UL16 binding protein 1
           (LOC626351), mRNA
          Length = 869

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 gcagtttctggagactctcc 445
           ||||||||||||||||||||
Sbjct: 219 gcagtttctggagactctcc 238

>gb|AC124493.4| Mus musculus BAC clone RP23-462P13 from chromosome 1, complete sequence
          Length = 191967

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 211   gcagcatctctgttcagcagcagc 234
             ||||||||||| ||||||||||||
Sbjct: 55713 gcagcatctctcttcagcagcagc 55690

>emb|AL732479.6| Human DNA sequence from clone RP11-351D13 on chromosome 10,
           complete sequence
          Length = 97781

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 gagaagcagatgcagtttct 434
           ||||||||||||||||||||
Sbjct: 240 gagaagcagatgcagtttct 259

>emb|AL683834.9| Human DNA sequence from clone RP11-159F17 on chromosome 10 Contains part
              of the GRID1 gene for glutamate receptor (ionotropic) delta
              1, complete sequence
          Length = 106580

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    gagaagcagatgcagtttct 434
              ||||||||||||||||||||
Sbjct: 104820 gagaagcagatgcagtttct 104839

>emb|AL132826.18|HSJ581I13 Human DNA sequence from clone RP4-581I13 on chromosome 20 Contains the
             FLRT3 gene for fibronectin leucine rich transmembrane
             protein 3, complete sequence
          Length = 123695

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   acagtgaggaaagcagaata 200
             ||||||||||||||||||||
Sbjct: 32789 acagtgaggaaagcagaata 32808

>emb|AL033391.1|CAC20C1 C.albicans cosmid Ca20C1
          Length = 37968

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  aatcaaaccttaccaatttg 516
            ||||||||||||||||||||
Sbjct: 2473 aatcaaaccttaccaatttg 2492

>emb|AJ851678.1| Gallus gallus mRNA for hypothetical protein, clone 16p24
          Length = 4333

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  acagtgaggaaagcagaata 200
            ||||||||||||||||||||
Sbjct: 2331 acagtgaggaaagcagaata 2350

>dbj|AK091819.1| Homo sapiens cDNA FLJ34500 fis, clone HLUNG2005479
          Length = 3293

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 cagtcccagagaagcagatg 426
           ||||||||||||||||||||
Sbjct: 80  cagtcccagagaagcagatg 61

>gb|AC108467.5| Homo sapiens BAC clone RP11-362I1 from 4, complete sequence
          Length = 92970

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  tgaggaaagcagaatatgga 204
            ||||||||||||||||||||
Sbjct: 3765 tgaggaaagcagaatatgga 3784

>gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, complete sequence
          Length = 161816

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   cagtcccagagaagcagatg 426
             ||||||||||||||||||||
Sbjct: 25246 cagtcccagagaagcagatg 25265

>gb|AC093309.2| Homo sapiens chromosome 5 clone RP11-97P23, complete sequence
          Length = 169422

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tcaaccaaattagaacaaac 85
             ||||||||||||||||||||
Sbjct: 21483 tcaaccaaattagaacaaac 21502

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 550     gagcagcatcttcaacgaag 569
               ||||||||||||||||||||
Sbjct: 4442555 gagcagcatcttcaacgaag 4442536



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 612     gtttgcatggagcaggcgagggcg 635
               ||||||||| ||||||||||||||
Sbjct: 4442483 gtttgcatgaagcaggcgagggcg 4442460

>gb|AC153655.4| Mus musculus BAC clone RP23-451K20 from chromosome 1, complete sequence
          Length = 167208

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   gcagcatctctgttcagcagcagc 234
             ||||||||||| ||||||||||||
Sbjct: 18621 gcagcatctctcttcagcagcagc 18644

>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005A05
          Length = 162520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   gagcagcatcttcaacgaag 569
             ||||||||||||||||||||
Sbjct: 37285 gagcagcatcttcaacgaag 37266



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 612   gtttgcatggagcaggcgagggcg 635
             ||||||||| ||||||||||||||
Sbjct: 37213 gtttgcatgaagcaggcgagggcg 37190

>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   gagcagcatcttcaacgaag 569
             ||||||||||||||||||||
Sbjct: 90236 gagcagcatcttcaacgaag 90217



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 612   gtttgcatggagcaggcgagggcg 635
             ||||||||| ||||||||||||||
Sbjct: 90164 gtttgcatgaagcaggcgagggcg 90141

>gb|AY303349.1| Enterobacteria phage RB69, complete genome
          Length = 167560

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tggaagatatcggacttgaa 154
             ||||||||||||||||||||
Sbjct: 33127 tggaagatatcggacttgaa 33108

>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6,
             complete sequence
          Length = 167320

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaaataacacgacaatgtct 23
             ||||||||||||||||||||
Sbjct: 72789 aaaataacacgacaatgtct 72770

>dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N11, full
           insert sequence
          Length = 1425

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 612 gtttgcatggagcaggcgagggcg 635
           ||||||||| ||||||||||||||
Sbjct: 910 gtttgcatgaagcaggcgagggcg 887

>gb|AC154594.2| Mus musculus BAC clone RP23-350L7 from chromosome 14, complete sequence
          Length = 195046

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ctctgttcagcagcagcatg 237
              ||||||||||||||||||||
Sbjct: 127228 ctctgttcagcagcagcatg 127247

>gb|AC003695.1|AC003695 Homo sapiens chromosome 17, clone hRPC.859_O_20, complete sequence
          Length = 115199

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   cagtcccagagaagcagatg 426
             ||||||||||||||||||||
Sbjct: 51527 cagtcccagagaagcagatg 51508

>gb|BC110301.1| Homo sapiens cDNA clone IMAGE:5216915, with apparent retained
           intron
          Length = 3435

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 cagtcccagagaagcagatg 426
           ||||||||||||||||||||
Sbjct: 61  cagtcccagagaagcagatg 42

>emb|AL669913.15| Mouse DNA sequence from clone RP23-479C2 on chromosome 2, complete
              sequence
          Length = 184221

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     ttcaggtccacaagtgcagg 64
              ||||||||||||||||||||
Sbjct: 179551 ttcaggtccacaagtgcagg 179532

>dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371b,
             complete sequence
          Length = 67552

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   aagcagaatatggagaaggggcag 214
             |||||||| |||||||||||||||
Sbjct: 36700 aagcagaagatggagaaggggcag 36677

>gb|U34036.1|BRU34036 Bacteriophage RB69 DNA polymerase (43) gene, complete cds
          Length = 2712

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 tggaagatatcggacttgaa 154
           ||||||||||||||||||||
Sbjct: 224 tggaagatatcggacttgaa 243


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,171,281
Number of Sequences: 3902068
Number of extensions: 6171281
Number of successful extensions: 112201
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112114
Number of HSP's gapped (non-prelim): 87
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)