ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29p19 |
|---|---|
| Clone Library Name | barley_pub |
>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)| Length = 230 Score = 117 bits (292), Expect = 4e-26 Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSG--LKEVDYFRAALNLRKNADVLGALAEQGINPD 465 W + CP G W+ EW +G CS + + +YF+ ALNL++ ++LGAL + GINPD Sbjct: 102 WPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPD 161 Query: 464 YRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPKLRC 285 + Y+ E I+ ++ + +G P V+C G QLYQ+YLCVD+ G I+CP P +C Sbjct: 162 GKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKC 221 Query: 284 PEEVLFHPF 258 E+ F F Sbjct: 222 GAEIEFPSF 230
>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)| Length = 222 Score = 115 bits (287), Expect = 1e-25 Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVC--SGLKEVDYFRAALNLRKNADVLGALAEQGINPD 465 W + CP NDG W EW +G C S L + DYF A L L++ A++L AL GI PD Sbjct: 94 WPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTNAGIKPD 153 Query: 464 YRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPKLRC 285 + Y + I+ + Q +G PG++C QLYQIYLCVD FI+CP +P RC Sbjct: 154 DKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRC 213 Query: 284 PEEVLFHPF 258 V F F Sbjct: 214 DSRVQFPKF 222
>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)| (RNase LX) Length = 237 Score = 99.8 bits (247), Expect = 6e-21 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSGLKEVDYFRAALNLRKNADVLGALAEQGINP--- 468 W ++ CP +DG W EW +G CS L + YF+ AL+ + +++L L GI P Sbjct: 100 WPSLACPSSDGLKFWSHEWLKHGTCSALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNG 159 Query: 467 DYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK-L 291 DY Y E IK A+ + +G P ++C G QLYQ+YLCVD FIDCP P Sbjct: 160 DY--YGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGG 217 Query: 290 RCPEEVLFHPFHT 252 +C ++ F F T Sbjct: 218 KCGSKIEFPSFST 230
>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)| (RNase LE) Length = 230 Score = 95.9 bits (237), Expect = 9e-20 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 3/130 (2%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSG---LKEVDYFRAALNLRKNADVLGALAEQGINP 468 W + CP G+ W EW +G C+ + YF+ AL+L+ D+L L I+P Sbjct: 101 WPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHP 160 Query: 467 DYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPKLR 288 D Y+ +I+ A+ +G P +QC G QLYQ+Y+CVD G + I+CP P + Sbjct: 161 DGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGK 220 Query: 287 CPEEVLFHPF 258 C + F F Sbjct: 221 CGTSIEFPTF 230
>RN28_PANGI (P83618) Ribonuclease-like storage protein precursor (Root 28 kDa| major protein) Length = 238 Score = 76.3 bits (186), Expect = 7e-14 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 10/120 (8%) Frame = -2 Query: 596 WKSEWRSYGVCSG--LKEVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHIKWAVN 423 W+ EW+ +G CS LK+ DYFR AL RK D++G L ++GI P+ LY + IK A+ Sbjct: 110 WEHEWKKHGRCSEALLKQTDYFRTALAFRKAFDIVGLLNQEGIYPNNDLYRPKMIKEAIK 169 Query: 422 QKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCP--------KLPKLRCPEEVLF 267 + L +P + + L I +CV++ F+DCP +L +R P ++ F Sbjct: 170 KHLNAVPEIDFTKNENSEYVLTDINVCVNQQATRFVDCPTDDATDDYRLKFVRLPSKMKF 229
>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)| Length = 191 Score = 73.2 bits (178), Expect = 6e-13 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSG--LKEVDYFRAALNLRKNADVLGALAEQGINPD 465 W N+ R + W EW +G CS + YF+ A+++R N D++GAL P+ Sbjct: 70 WPNVL--RANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPN 127 Query: 464 YRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGK-KQLYQIYLCVDKDGKTFIDCPK 303 R + + IK + K G PG++C+ P K L Q+ C +DG T IDC + Sbjct: 128 GRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDCTR 182
>RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-)| Length = 200 Score = 62.4 bits (150), Expect = 1e-09 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 8/135 (5%) Frame = -2 Query: 641 YWSNI-HCPRNDGTGTWKSEWRSYGVCSGLKEV-----DYFRAALNLRKNADVLGALAEQ 480 YW ++ H N W+ EW +G C+ + YF L+L K + L + Sbjct: 63 YWPDVLHSSPNHSVHFWRHEWEKHGTCAAQLDALNSQRKYFGKTLDLYKELALNSTLQKL 122 Query: 479 GINPDYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKK--QLYQIYLCVDKDGKTFIDCP 306 GI P Y IK A+ GV+P VQC G+K L QI LC+ +D DCP Sbjct: 123 GIKPSISYYQISDIKHALVGVYGVVPKVQCLPPKSGEKVQTLGQIELCLTRD-LQLQDCP 181 Query: 305 KLPKLRCPEEVLFHP 261 + C + +F+P Sbjct: 182 EPGLEICEDGPVFYP 196
>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)| Length = 223 Score = 60.5 bits (145), Expect = 4e-09 Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSGLKEV----DYFRAALNLRKNADVLGALAEQGIN 471 W ++ P D W E+ +G CS + DYF + L ++ AL + I Sbjct: 99 WPSLTGPNTD---FWTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIY 155 Query: 470 P-DYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 P D Y I A+ G PG+QC G QL + +C+DK+ + +DCP L Sbjct: 156 PSDSNTYKPVDITNAITTHFGGKPGIQCSSG-----QLSTVAVCIDKNSLSIMDCPDLQG 210 Query: 293 LRCPEEVLF 267 C V F Sbjct: 211 WSCSGSVKF 219
>RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb)| Length = 180 Score = 56.2 bits (134), Expect = 8e-08 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Frame = -2 Query: 611 DGTGTWKSEWRSYGVCSGLKEVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHIKW 432 D W EW +G CSG E D+F L+L DV AL GI P +++ + Sbjct: 67 DNASFWSHEWSKHGTCSGYAEHDFFATVLSLYDQYDVKSALDNGGIEPGSSSVSSDSLIS 126 Query: 431 AVNQKLGVMPGVQCKDGPFGKKQL-----YQIYLCVDKDGKTFIDCP 306 + +G +P + C+ F L ++ C D G +F DCP Sbjct: 127 VITDNIGGVPVLNCEGSTFASVGLCITKNLELRDCPDNMG-SFWDCP 172
>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)| Length = 259 Score = 54.7 bits (130), Expect = 2e-07 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVCSGL-----KEVDYFRAALNLRKNADVLGALAEQG 477 YW ++ ++ + WK EW +G C+ E YF +L+L K D+ L + G Sbjct: 100 YWPDVIHRSSNRSQFWKHEWVKHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFG 159 Query: 476 INPDYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGK--KQLYQIYLCVDKDGKTFIDCPK 303 I P Y K A+ + GV+P +QC G+ + + QI LC K+ +C + Sbjct: 160 IKPSINYYQLADFKDALTRIYGVVPKIQCLMPEQGESVQTVGQIELCFTKEDLHLRNCTE 219 Query: 302 LPKLRCPEEVLFHPFHTWMLNATSS 228 P E L W+ S+ Sbjct: 220 ------PGEQLSSRQEAWLAMEAST 238
>RNOY_CRAGI (Q7M456) Ribonuclease Oy (EC 3.1.27.-) (RNase Oy)| Length = 213 Score = 54.7 bits (130), Expect = 2e-07 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 11/138 (7%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVC-----SGLKEVDYFRAALNLRKNADVLGALAEQG 477 YW N++ P W+ EW +G C + E+ YF L L ++ L QG Sbjct: 72 YWPNLY-PDTKANSFWEHEWSKHGTCATSLPATSNELKYFGMGLKLHAKYNISRILVNQG 130 Query: 476 INPDYRL-YNTEHIKWAVNQKLGVMPGVQC-KDGPFGKKQ-LYQIYLCVDKDGKTFIDCP 306 I P Y + AV ++LGV ++C D KKQ LY+I +C+ K+ + I C Sbjct: 131 ILPSKTAGYMINETEAAVKRELGVDAVIECVYDKEKTKKQLLYEISICLTKEFE-LISCN 189 Query: 305 K--LPKLRCP-EEVLFHP 261 K + + CP +E F+P Sbjct: 190 KKEVSETTCPRKEPFFYP 207
>RNT2_HUMAN (O00584) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)| Length = 256 Score = 53.9 bits (128), Expect = 4e-07 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 7/147 (4%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVCSGLKEV-----DYFRAALNLRKNADVLGALAEQG 477 YW ++ + + WK EW +G C+ + YF +L L + D+ L + G Sbjct: 96 YWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLG 155 Query: 476 INPDYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGK--KQLYQIYLCVDKDGKTFIDCPK 303 I P Y K A+ + GV+P +QC + + + QI LC+ K + +C + Sbjct: 156 IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTE 215 Query: 302 LPKLRCPEEVLFHPFHTWMLNATSSAK 222 + P++ W+ N + ++ Sbjct: 216 PGEQPSPKQ------EVWLANGAAESR 236
>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 235 Score = 52.0 bits (123), Expect = 2e-06 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Frame = -2 Query: 608 GTGTWKSEWRSYGVCS--GLKEVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHIK 435 G W ++W+ +G C+ DYF AL L+K +VL L+ + + P + + + Sbjct: 115 GQKFWVTQWKKHGACALPMYSFNDYFVKALELKKRNNVLDMLSRKSLTPGDQRVDVSDVN 174 Query: 434 WAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 A+ + G + ++C +G L ++ +C D G IDCP Sbjct: 175 GAITKVTGGIAILKCPEG-----YLTEVIICFDPSGFPVIDCP 212
>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar| glycoprotein 6) (S6-RNase) Length = 215 Score = 50.8 bits (120), Expect = 3e-06 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Frame = -2 Query: 596 WKSEWRSYGVCSG--LKEVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHIKWAVN 423 W+ E+ +G C +V YFR A+ L+ D+L +L GI Y+ Y + I + Sbjct: 106 WRREYIKHGTCCSEIYNQVQYFRLAMALKDKFDLLTSLKNHGIIRGYK-YTVQKINNTIK 164 Query: 422 QKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 P + C G ++L+ + +C D K IDCP Sbjct: 165 TVTKGYPNLSCTKG----QELWFVGICFDSTAKNVIDCP 199
>RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 214 Score = 49.3 bits (116), Expect = 1e-05 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Frame = -2 Query: 611 DGTGTWKSEWRSYGVCSGLK--EVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHI 438 D WK E+ +G C K YF A+ LR D+L +L GI+ + Y +++ Sbjct: 101 DKQAFWKDEYVKHGTCCSDKFDREQYFDLAMTLRDKFDLLSSLRNHGISRGFS-YTVQNL 159 Query: 437 KWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 + G P + C ++L +I +C D+ K IDCP Sbjct: 160 NNTIKAITGGFPNLTCSR----LRELKEIGICFDETVKNVIDCP 199
>RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (Stylar| glycoprotein 4) (S4-RNase) Length = 233 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Frame = -2 Query: 596 WKSEWRSYGVCSGLKEVD--YFRAALNLRKNADVLGALAEQGINPD-------YRLYNTE 444 W+ +WR +G C YF AL L+ DVL L NP R++NT Sbjct: 118 WQDQWRKHGSCCFPPHESEIYFLKALELKDRLDVLTILENNNFNPGTPQPFSVLRVFNT- 176 Query: 443 HIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPK 303 +++ +G P ++C + L ++ +CVD +G + + CP+ Sbjct: 177 -----ISRAIGKTPILKC-----AQSYLKEVVICVDNNGASVVHCPR 213
>RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1-RNase)| Length = 228 Score = 47.8 bits (112), Expect = 3e-05 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSG---LKEVDYFRAALNL--RKNADVLGALAEQGI 474 W N+ R+D G W+ EW +G C ++ Y + + + + +V L++ I Sbjct: 96 WPNV-LNRSDHVGFWEKEWIKHGTCGYPTIKDDMHYLQTVIRMYITQKQNVSAILSKAAI 154 Query: 473 NPDYRLYNTEHIKWAVNQKLG-VMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLP 297 P+ I+ A+ + P +C+ +L ++ LC D+D K FI+CP P Sbjct: 155 QPNGTNRPLVDIENAIRRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRDLKKFINCPHGP 214 Query: 296 ----KLRCPEEVLF 267 + CP V + Sbjct: 215 PQGSRFSCPSSVQY 228
>RNRH_RHINI (P08056) Ribonuclease Rh precursor (EC 3.1.27.1) (RNase Rh)| Length = 238 Score = 45.1 bits (105), Expect = 2e-04 Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 15/110 (13%) Frame = -2 Query: 641 YWSNIHCPRNDGTGT--WKSEWRSYGVC-------------SGLKEVDYFRAALNLRKNA 507 YW P N G W EW +G C G VDYF+ A++LR Sbjct: 106 YW-----PSNQGNNNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQY 160 Query: 506 DVLGALAEQGINPDYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLY 357 +V A + GI P Y ++ A+ G + C G LY Sbjct: 161 NVYKAFSSNGITPG-GTYTATEMQSAIESYFGAKAKIDCSSGTLSDVALY 209
>RNS6_PYRPY (O80324) Ribonuclease S-6 precursor (EC 3.1.27.1) (S6-RNase)| Length = 229 Score = 43.9 bits (102), Expect = 4e-04 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSGLK----EVDYFRAALNL--RKNADVLGALAEQG 477 W N+ R D G W +W +G C E+ YF+ + + + +V L+ Sbjct: 96 WPNV-LDRTDHVGFWNRQWNKHGSCGKAPTIKDEMHYFKTVIKMYITQKQNVSEILSRAK 154 Query: 476 INPDYRLYNTEHIKWAVNQKLGVM---PGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 I P+ ++ + I A+ +LG P ++C+ +L +I +C D++ FIDCP Sbjct: 155 IEPEGKIRRRDDIINAI--RLGTKDKKPKLKCQKNN-QTTELVEITICSDRNLTQFIDCP 211 Query: 305 K 303 + Sbjct: 212 R 212
>RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5-RNase)| Length = 227 Score = 43.9 bits (102), Expect = 4e-04 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 8/119 (6%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSGLKEVD----YFRAALNL--RKNADVLGALAEQG 477 W N+ R W EW +G C G +D YF + + K +V L++ Sbjct: 95 WPNVF-DRTKNKLFWDKEWMKHGTC-GYPTIDNENHYFETVIKMYISKKQNVSRILSKAK 152 Query: 476 INPDYRLYNTEHIKWAV-NQKLGVMPGVQC-KDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 I PD + I+ A+ N P ++C K G +L +I LC DK G+ FIDCP Sbjct: 153 IEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGT--TTELVEITLCSDKSGEHFIDCP 209
>RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3-RNase)| Length = 222 Score = 43.5 bits (101), Expect = 5e-04 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 8/119 (6%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSGLKEVD----YFRAALNL--RKNADVLGALAEQG 477 W N+ R W EW +G C G +D YF + + K +V L++ Sbjct: 90 WPNVF-DRTKNNLFWDKEWMKHGSC-GYPTIDNENHYFETVIKMYISKKQNVSRILSKAK 147 Query: 476 INPDYRLYNTEHIKWAV-NQKLGVMPGVQC-KDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 I PD + I+ A+ N P ++C K G +L +I LC DK G+ FIDCP Sbjct: 148 IEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGT--TTELVEITLCSDKSGEHFIDCP 204
>RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4-RNase)| Length = 228 Score = 42.7 bits (99), Expect = 0.001 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVC---SGLKEVDYFRAALN--LRKNADVLGALAEQGI 474 W N+ R+D G W+ EW +G C + ++ Y + + + + +V L++ I Sbjct: 96 WPNV-LNRSDHVGFWEREWLKHGTCGYPTIKDDMHYLKTVIKMYITQKQNVSAILSKATI 154 Query: 473 NPDYRLYNTEHIKWAVNQ-KLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLP 297 P+ + I+ A+ P +C+ +L ++ LC ++D FI+CP P Sbjct: 155 QPNGNNRSLVDIENAIRSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLTKFINCPHGP 214 Query: 296 ----KLRCPEEVLF 267 + CP V + Sbjct: 215 PKGSRYFCPANVKY 228
>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar| glycoprotein 7) (S7-RNase) Length = 218 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Frame = -2 Query: 596 WKSEWRSYGVC--SGLKEVDYFRAALNLRKNADVLGALAEQGINPDYRL-YNTEHIKWAV 426 W+ E+ +G C YF A+ L+ D+L +L GI P + Y + I + Sbjct: 106 WRHEYNKHGKCCSESYNREQYFDLAMALKDKFDLLSSLRNHGIIPGRGMKYTVQKINSTI 165 Query: 425 NQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCP 306 + P + C G +L +I +C D K I+CP Sbjct: 166 KKITQGYPNLSCTKGIM---ELVEIGICFDSMVKNVINCP 202
>RNT2_ASPOR (P10281) Ribonuclease T2 precursor (EC 3.1.27.1) (RNase T2)| Length = 276 Score = 42.4 bits (98), Expect = 0.001 Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVC------------SGLKEV-DYFRAALNLRKNADV 501 YW N D W+ EW +G C S KEV DY + ++L K D Sbjct: 113 YWPNYE---GDDEEFWEHEWNKHGTCINTIEPSCYKDYSPQKEVGDYLQKTVDLFKGLDS 169 Query: 500 LGALAEQGINPD----YRLYNTEHIKWAVNQKLGVMPGVQCKDG 381 ALA+ GI PD Y+ E A++ G P + C+DG Sbjct: 170 YKALAKAGIVPDSSKTYKRSEIESALAAIHD--GKKPYISCEDG 211
>RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1)| Length = 259 Score = 42.0 bits (97), Expect = 0.002 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Frame = -2 Query: 641 YWSNIHCPR----NDGTGT-WKSEWRSYGVCSG---LKEVDYFRAALNLRKNADVLGALA 486 YW ++ C N G G+ W EW +G CS E +YF LNL +V L Sbjct: 106 YWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLY 165 Query: 485 EQG-INPDYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGK 324 + G + + Y I A+ + P V CK + + +I +C KD K Sbjct: 166 QAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCK-----RDAIDEIRICFYKDFK 215
>RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar glycoprotein F11)| (SF11-RNase) Length = 196 Score = 40.8 bits (94), Expect = 0.003 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 2/113 (1%) Frame = -2 Query: 599 TWKSEWRSYGVCSGLK--EVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHIKWAV 426 +WK ++ +G C + + YF AL L+ D+L L I P Y + I A+ Sbjct: 83 SWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIPGSS-YTFQDIFDAI 141 Query: 425 NQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPKLRCPEEVLF 267 P ++C + G +LY+I +C + + CP+ +VLF Sbjct: 142 KTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFRCPQSDTCDKTAKVLF 194
>RNM_ASPSA (P19791) Ribonuclease M (EC 3.1.27.1) (RNase M)| Length = 238 Score = 40.8 bits (94), Expect = 0.003 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 18/145 (12%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVCSGL------------KEV-DYFRAALNLRKNADV 501 YW + D + W+ EW +G C +EV D+F+ ++L K D Sbjct: 94 YWPDYEGADEDES-FWEHEWNKHGTCINTIDPSCYTDYYAQEEVGDFFQQVVDLFKTLDS 152 Query: 500 LGALAEQGINPD----YRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIY-LCVD 336 AL++ GI P Y+L + E A++ G P V C+DG QLY + + Sbjct: 153 YTALSDAGITPSEDATYKLSDIEDALAAIHD--GYPPYVGCEDGAL--SQLYYYFNVKGS 208 Query: 335 KDGKTFIDCPKLPKLRCPEEVLFHP 261 G T++ +L C + +P Sbjct: 209 AIGGTYVASERLEDSNCKGSGIKYP 233
>RNS7_PYRPY (O80325) Ribonuclease S-7 precursor (EC 3.1.27.1) (S7-RNase)| Length = 226 Score = 39.3 bits (90), Expect = 0.010 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVC---SGLKEVDYFRAALN--LRKNADVLGALAEQGI 474 W N+ R + G W +W +G C + + + YF+ +N + + +V L++ I Sbjct: 96 WPNV-LDRTNHVGFWNKQWIKHGSCGYPAIMNDTHYFQTVINMYITQKQNVSEILSKAKI 154 Query: 473 NPDYRLYNTEHIKWAV-NQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLP 297 P HI+ A+ N P +C+ G +L ++ LC D F +CP P Sbjct: 155 EPLGIQRPLVHIENAIRNSTNNKKPKFKCQKNS-GVTELVEVGLCSDGSLTQFRNCPHPP 213 Query: 296 ---KLRCPEEVLF 267 CP +V + Sbjct: 214 PGSPYLCPADVKY 226
>RNY1_EMENI (Q5B3K6) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 417 Score = 39.3 bits (90), Expect = 0.010 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 14/99 (14%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVCSGLKE-------------VDYFRAALNLRKNADV 501 YW + R D W+ EW +G C E VDYF + L + Sbjct: 135 YWKDY---RGDDPNLWEHEWNKHGTCVSTLETHCYSEYYPQQEVVDYFDKTVELFHDLPT 191 Query: 500 LGALAEQGINPDY-RLYNTEHIKWAVNQKLGVMPGVQCK 387 LA GI P Y + Y ++ A+++ G V+C+ Sbjct: 192 YMTLANAGIVPSYTQTYTRHEVEDALSKAHGATVTVRCR 230
>RNTR_TRIVI (P24657) Ribonuclease Trv (EC 3.1.27.1) (RNase Trv)| Length = 234 Score = 38.1 bits (87), Expect = 0.022 Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 19/146 (13%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVCSGLKE-------------VDYFRAALNLRKNADV 501 YW + + + W+ EW +G C + D+F ++L K Sbjct: 95 YWKDY---QGNDESFWEHEWGKHGTCITTLDPGCYDDYVPTEEAADFFSKTVSLFKTLPT 151 Query: 500 LGALAEQGINPD-YRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVD---- 336 LA+ GI PD + Y + I+ A++Q+ G + C DG K L +++ + Sbjct: 152 YQWLADAGITPDGSKSYALDDIQSALSQQHGAEVTLGC-DG----KTLNEVWYHFNVKGS 206 Query: 335 -KDGKTFIDCPKLPKLRCPEEVLFHP 261 +DG+ P K CP++V + P Sbjct: 207 LQDGQFVAAEPDGAKSTCPDDVYYDP 232
>RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2-RNase)| Length = 221 Score = 37.7 bits (86), Expect = 0.029 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 6/118 (5%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVCSGL---KEVDYFRAALN--LRKNADVLGALAEQGI 474 W N+ R G W+ +W +G C+ + YF + L + +V L+ I Sbjct: 89 WPNVS-DRKANRGFWRKQWYKHGSCASPALPNQKHYFETVIRMFLAEKQNVSRILSMATI 147 Query: 473 NPDYRLYNTEHIKWAVNQKLGVM-PGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPK 303 P+ + I+ A+ M P ++C+ G +L ++ LC D + FI+CP+ Sbjct: 148 EPEGKNRTLLEIQNAIRAGTNNMIPKLKCQKVN-GMTELVEVTLCHDSNLTQFINCPR 204
>RNY1B_CANAL (Q5AKB1) Ribonuclease T2-like 1-B precursor (EC 3.1.27.1) (RNase| T2-like B) Length = 413 Score = 35.0 bits (79), Expect = 0.19 Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 15/159 (9%) Frame = -2 Query: 638 WSNIHCPRNDGTGTWKSEWRSYGVC-SGLKE-------------VDYFRAALNLRKNADV 501 W + H + W E+ +G C S +K D+FR A+ L Sbjct: 133 WKDYH---GKDSSFWAHEYNKHGTCFSTIKPSCYLSNTPKNQNLYDFFRIAIGLFNKLPT 189 Query: 500 LGALAEQGINP-DYRLYNTEHIKWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGK 324 LAE GI P + + Y+ I+ A+N K G ++C + Y ++ Sbjct: 190 YDWLAEAGIVPTNSKTYSLSEIQSALNDKFGANVFIKCDYNHAINEIWYYHHVKGSLLQH 249 Query: 323 TFIDCPKLPKLRCPEEVLFHPFHTWMLNATSSAKITLPT 207 F+ + CP + +P + + T + K T T Sbjct: 250 NFLPIDSVAHTNCPSTGIKYPPKGKVAHPTLTTKTTTGT 288
>RNI_AERHY (Q07465) Ribonuclease precursor (EC 3.1.27.-)| Length = 215 Score = 34.3 bits (77), Expect = 0.32 Identities = 22/96 (22%), Positives = 43/96 (44%) Frame = -2 Query: 596 WKSEWRSYGVCSGLKEVDYFRAALNLRKNADVLGALAEQGINPDYRLYNTEHIKWAVNQK 417 ++ EW +G CSGL + D+ + A +LR+ + G L+ + + + Sbjct: 99 YRHEWEKHGTCSGLSQHDFHQLASDLRQKREDPGRLSVSCRAAAQKPLPAQGGSGQCQRL 158 Query: 416 LGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDC 309 G PG + L ++Y+C++K+G + C Sbjct: 159 AG--PGQHHGGLRRRWRFLREVYICLNKEGTDAVTC 192
>RNL2_LENED (P81296) Ribonuclease Le2 (EC 3.1.27.1) (RNase Le2)| Length = 239 Score = 33.9 bits (76), Expect = 0.42 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 17/101 (16%) Frame = -2 Query: 641 YWSNIHCPRNDGTGT--WKSEWRSYGVC--------------SGLKEVDYFRAALNLRKN 510 +W N +DG+ W+ EW ++G C G + V +F + L K Sbjct: 94 FWLN---DPDDGSNEELWEHEWATHGTCYSTLQTSCLPEGSPKGAEAVAFFEQVVTLFKT 150 Query: 509 ADVLGALAEQGINPDYRLYNT-EHIKWAVNQKLGVMPGVQC 390 L QGI P +T + A+ + GV+P + C Sbjct: 151 LPTYEWLTNQGIKPSSSTTHTYSALTAALEAEAGVIPALNC 191
>RNY1_ASPFU (Q4WXZ5) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 414 Score = 33.9 bits (76), Expect = 0.42 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 14/100 (14%) Frame = -2 Query: 641 YWSNIHCPRNDGTGTWKSEWRSYGVCSGLKE-------------VDYFRAALNLRKNADV 501 +W + R D W+ EW +G C E VDYF + + + Sbjct: 128 FWKDF---RGDDEDLWEHEWNKHGTCISTLETTCYADYYPQQEVVDYFNKTVEIFQKLPT 184 Query: 500 LGALAEQGINPDY-RLYNTEHIKWAVNQKLGVMPGVQCKD 384 LA GI P + Y + I+ A+ + ++C++ Sbjct: 185 YQTLANAGIVPSHTETYTLDEIQAALAKAHAAPVTIRCRN 224
>RNY1_ASHGO (Q75BW5) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 292 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = -2 Query: 584 WRSYGVCSGLKEVDYFRAALNLRKNADVLGALAEQGINP 468 W S DYFR A+NL D AL+ QGI P Sbjct: 181 WGSVASAEDQAIYDYFRIAMNLHLKIDAYHALSRQGIKP 219
>CSP_PLACB (P08672) Circumsporozoite protein precursor (CS)| Length = 378 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = -1 Query: 483 AGHQPGLQAVQHGAHQMGGEPEAGSNAGGAVQGRAVRQEAA 361 AG QP Q G ++ GG+P AG N G RA Q AA Sbjct: 195 AGGQPAAGGNQAGGNRAGGQPAAGGNQAGG--NRAGGQPAA 233 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = -1 Query: 483 AGHQPGLQAVQHGAHQMGGEPEAGSNAGGAVQGRAVRQEAA 361 AG QP Q G ++ GG+P AG N G Q A Sbjct: 211 AGGQPAAGGNQAGGNRAGGQPAAGGNQAGGQPAAGGNQAGA 251
>ESSC_STAAW (Q8NYF3) Protein essC| Length = 1479 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -2 Query: 386 DGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 DGPF K LY I D KTFIDC +P+ Sbjct: 1367 DGPFEKDSLYII-----NDFKTFIDCTYIPE 1392
>ESSC_STAAS (Q6GCI5) Protein essC| Length = 1479 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -2 Query: 386 DGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 DGPF K LY I D KTFIDC +P+ Sbjct: 1367 DGPFEKDSLYII-----NDFKTFIDCTYIPE 1392
>ESSC_STAAC (Q5HJ86) Protein essC| Length = 1479 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -2 Query: 386 DGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 DGPF K LY I D KTFIDC +P+ Sbjct: 1367 DGPFEKDSLYII-----NDFKTFIDCTYIPE 1392
>YMT6_YEAST (Q04215) Transposon Ty1 protein A| Length = 440 Score = 30.4 bits (67), Expect = 4.7 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 318 HRLPQAAQVALPRGGPLPSLPHLDAQR 238 H PQAAQV LP+ GP P ++ Q+ Sbjct: 69 HASPQAAQVPLPQNGPYPQQRMMNTQQ 95
>P3F2B_XENLA (P70030) POU domain, class 3, transcription factor 2-B| (Transcription factor POU3-B) (XLPOU3B) Length = 385 Score = 30.4 bits (67), Expect = 4.7 Identities = 22/74 (29%), Positives = 33/74 (44%) Frame = -1 Query: 333 GRQDLHRLPQAAQVALPRGGPLPSLPHLDAQRHIVRQDHLAHRGLRATRSAGASTETTCY 154 G+QD+ Q+++ L G +L H H+V H H G A RS G++ ++ Sbjct: 76 GQQDIKPTVQSSRDELHGSG---TLQHQSRAPHLVHPAHGNHHGPGAWRSTGSTHLSSMA 132 Query: 153 CGLNSGPLYCAMSF 112 G LY SF Sbjct: 133 SSNGQGLLYSQPSF 146
>P3F2A_XENLA (P31365) POU domain, class 3, transcription factor 2-A| (Transcription factor POU3-A) (XLPOU3) Length = 382 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/74 (29%), Positives = 33/74 (44%) Frame = -1 Query: 333 GRQDLHRLPQAAQVALPRGGPLPSLPHLDAQRHIVRQDHLAHRGLRATRSAGASTETTCY 154 G+QD+ Q+++ L G +L H H+V H H G A RS G++ ++ Sbjct: 76 GQQDIKPTVQSSRDELHVSG---TLQHQSRAPHLVHPAHGNHHGPGAWRSTGSTHLSSMA 132 Query: 153 CGLNSGPLYCAMSF 112 G LY SF Sbjct: 133 SSNGQGLLYSQPSF 146
>SMAD1_MOUSE (P70340) Mothers against decapentaplegic homolog 1 (SMAD 1)| (Mothers against DPP homolog 1) (Mad-related protein 1) (Mothers-against-DPP-related-1) (mMad1) (Dwarfin-A) (Dwf-A) Length = 465 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Frame = -2 Query: 437 KWAVNQKLGVMPGVQCKDGPFGKKQLYQIYLCVDKDGKTFIDCPKLPKLRCPEEVLFHPF 258 +W+ Q + ++C + PFG KQ +C++ ++ P LP + P+ ++P Sbjct: 93 RWSDLQSHHELKPLECCEFPFGSKQK---EVCINPYHYKRVESPVLPPVLVPKHSEYNPQ 149 Query: 257 HTWMLNATSSAK--------ITLPTEA*EPPARPVP 174 H+ + + + T P +P + P P Sbjct: 150 HSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFP 185
>VPS36_YEAST (Q06696) Vacuolar protein sorting protein 36| Length = 566 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -1 Query: 318 HRLPQAAQVA--LPRGGPLPSLPHLDAQRHIVRQDHLAHRGLRATRSAGASTE 166 HRLP A++V L R S H++ +++ + ++ +H L ++ S G+STE Sbjct: 202 HRLPNASKVRSKLNRLNFHDSRVHIELEKNSLARNKSSHSALSSSSSTGSSTE 254
>ESSC_STAAU (P0C048) Protein essC| Length = 1479 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -2 Query: 386 DGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 DGPF K LY I D KT+IDC +P+ Sbjct: 1367 DGPFEKDSLYII-----NDFKTYIDCTYIPE 1392
>ESSC_STAAN (Q99WT9) Protein essC| Length = 1479 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -2 Query: 386 DGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 DGPF K LY I D KT+IDC +P+ Sbjct: 1367 DGPFEKDSLYII-----NDFKTYIDCTYIPE 1392
>ESSC_STAAM (Q932J9) Protein essC| Length = 1479 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -2 Query: 386 DGPFGKKQLYQIYLCVDKDGKTFIDCPKLPK 294 DGPF K LY I D KT+IDC +P+ Sbjct: 1367 DGPFEKDSLYII-----NDFKTYIDCTYIPE 1392 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,236,680 Number of Sequences: 219361 Number of extensions: 1430296 Number of successful extensions: 4520 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4495 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
