Clone Name	rbaal29p17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clon...	539	e-150
2	dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clon...	539	e-150
3	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	204	3e-49
4	dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D...	204	3e-49
5	ref|NM_193993.1| Oryza sativa (japonica cultivar-group), predic...	147	6e-32
6	dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic D...	54	6e-04
7	gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park C...	44	0.62
8	ref|XM_649970.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box h...	42	2.4
9	ref|NM_205069.1| Gallus gallus integrin, alpha 1 (ITGA1), mRNA	42	2.4
10	dbj|AB000470.1| Gallus gallus mRNA for alpha1 integrin, complete...	42	2.4
11	gb|AY772391.1| Danio rerio protocadherin 15b mRNA, complete cds	40	9.7
12	ref|NM_117612.2| Arabidopsis thaliana transferase, transferring ...	40	9.7
13	gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome...	40	9.7
14	gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome...	40	9.7
15	gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, com...	40	9.7
16	gb|AC006029.2| Homo sapiens BAC clone GS1-195F7 from 7q31.2-q32,...	40	9.7
17	ref|XM_503978.1| Yarrowia lipolytica CLIB122, YALI0E15334g predi...	40	9.7
18	emb|AL359708.8| Human DNA sequence from clone RP11-171O14 on chr...	40	9.7
19	emb|AL359741.9| Human DNA sequence from clone RP11-161P17 on chr...	40	9.7
20	emb|AL356214.20| Human DNA sequence from clone RP11-30E16 on chr...	40	9.7
21	emb|AL137250.17| Human DNA sequence from clone RP11-347L8 on chr...	40	9.7
22	gb|CP000089.1| Dechloromonas aromatica RCB, complete genome	40	9.7
23	emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in...	40	9.7
24	emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chro...	40	9.7
25	gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, comp...	40	9.7
26	emb|BX957226.10| Zebrafish DNA sequence from clone CH211-110P13 ...	40	9.7
27	gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome	40	9.7
28	gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence	40	9.7
29	gb|AC020687.6| Homo sapiens chromosome 15, clone RP11-648K4, com...	40	9.7
30	gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	40	9.7
31	gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome	40	9.7
32	gb|AC148671.1| Macaca mulatta Major Histocompatibility Complex B...	40	9.7
33	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.7
34	emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 i...	40	9.7
35	emb|BX828237.1|CNS0A3YF Arabidopsis thaliana Full-length cDNA Co...	40	9.7
36	ref|NM_001012486.1| Danio rerio protocadherin 15b (pcdh15b), mRNA	40	9.7
37	dbj|AB124586.1| Pan troglodytes RBP4 gene for retinol binding pr...	40	9.7
38	ref|NM_211718.1| Eremothecium gossypii AGL010Wp (AGL010W), mRNA	40	9.7
39	emb|BX537311.3| Mouse DNA sequence from clone RP24-315O23 on chr...	40	9.7
40	emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA ...	40	9.7
41	emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, ...	40	9.7
42	emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chro...	40	9.7
43	emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ...	40	9.7
44	emb|X94354.1|HSCGMPPDE H.sapiens DNA for Cone cGMP-PDE gene	40	9.7

---

>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full
            insert sequence
          Length = 1683

 Score =  539 bits (272), Expect = e-150
 Identities = 467/532 (87%)
 Strand = Plus / Minus

                                                                        
Query: 175  cgttcaagtttgctgagcaaatcttcaagacgtggcaattccttcaaaatatcattccag 234
            |||||||||||||| ||||  |||||||| ||||| | ||||| ||| || || ||||| 
Sbjct: 1387 cgttcaagtttgctcagcagttcttcaagtcgtggaagttcctgcaatatgtcgttccaa 1328

                                                                        
Query: 235  tttggcatgcctcttccggatcttctcacacgaccatcaagacggagaattatgtagaca 294
            ||||||||||||||||| |||||||| ||||||||||| |  ||||| ||||| ||||||
Sbjct: 1327 tttggcatgcctcttccagatcttctgacacgaccatccaatcggaggattatatagaca 1268

                                                                        
Query: 295  tcttcaccaggagtgacaccttccgattcttgctgatcacgtatccaactttcccattgt 354
            |||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 1267 tcttcaccgggagtgacaccttcagactcttgctggtcacgtatccaactttcccattgt 1208

                                                                        
Query: 355  tctggagagacaatatcggctttaaatcgaacctcggctctgagtcgtgattttgccgca 414
            || |||||||||||||| || ||||||||  | || ||| | |  |||||||| || |||
Sbjct: 1207 tcaggagagacaatatcagccttaaatcgctcttcagcttttaaccgtgatttcgctgca 1148

                                                                        
Query: 415  atagattcagtacgtttttcaaagtcgcccccaattgaaggagctgatgcagcagatctt 474
            |||||||||||||| || ||||||||  |||||| |||||||||||||||||||||||||
Sbjct: 1147 atagattcagtacgcttctcaaagtcatccccaactgaaggagctgatgcagcagatctt 1088

                                                                        
Query: 475  gtagtaccgaagccttttggtttgccttggactttttgtgaagcaccaaagatcacagga 534
            | | | || |||||| |||| || | |||| |||| || |||||||||||||||||||||
Sbjct: 1087 gaacttccaaagcctcttggcttactttgggctttctgagaagcaccaaagatcacagga 1028

                                                                        
Query: 535  attagaagaacgcctcgtttgagcagttcagttcggtacctctcagctctttgcattgct 594
            ||||||||||| |||||||| ||||||||||| || || |||||||||||||||||||||
Sbjct: 1027 attagaagaacacctcgtttcagcagttcagtccgatatctctcagctctttgcattgct 968

                                                                        
Query: 595  tgagtaacagatgcttttgaacctgccaatataactggcctagtaatgtcccggagttgc 654
             ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 967  cgagtaatggatgcttttgaacctgccagtataactggcctagtaatgtcccggagttgc 908

                                                                
Query: 655  acaagttcagttatgcgattggttgacagacgcacaggtaaccttgaaaggg 706
            ||||| ||| | ||||||||||||||||| || |||||||||||||||||||
Sbjct: 907  acaagctcaataatgcgattggttgacaggcggacaggtaaccttgaaaggg 856

---

>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full
            insert sequence
          Length = 1542

 Score =  539 bits (272), Expect = e-150
 Identities = 467/532 (87%)
 Strand = Plus / Minus

                                                                        
Query: 175  cgttcaagtttgctgagcaaatcttcaagacgtggcaattccttcaaaatatcattccag 234
            |||||||||||||| ||||  |||||||| ||||| | ||||| ||| || || ||||| 
Sbjct: 1389 cgttcaagtttgctcagcagttcttcaagtcgtggaagttcctgcaatatgtcgttccaa 1330

                                                                        
Query: 235  tttggcatgcctcttccggatcttctcacacgaccatcaagacggagaattatgtagaca 294
            ||||||||||||||||| |||||||| ||||||||||| |  ||||| ||||| ||||||
Sbjct: 1329 tttggcatgcctcttccagatcttctgacacgaccatccaatcggaggattatatagaca 1270

                                                                        
Query: 295  tcttcaccaggagtgacaccttccgattcttgctgatcacgtatccaactttcccattgt 354
            |||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 1269 tcttcaccgggagtgacaccttcagactcttgctggtcacgtatccaactttcccattgt 1210

                                                                        
Query: 355  tctggagagacaatatcggctttaaatcgaacctcggctctgagtcgtgattttgccgca 414
            || |||||||||||||| || ||||||||  | || ||| | |  |||||||| || |||
Sbjct: 1209 tcaggagagacaatatcagccttaaatcgctcttcagcttttaaccgtgatttcgctgca 1150

                                                                        
Query: 415  atagattcagtacgtttttcaaagtcgcccccaattgaaggagctgatgcagcagatctt 474
            |||||||||||||| || ||||||||  |||||| |||||||||||||||||||||||||
Sbjct: 1149 atagattcagtacgcttctcaaagtcatccccaactgaaggagctgatgcagcagatctt 1090

                                                                        
Query: 475  gtagtaccgaagccttttggtttgccttggactttttgtgaagcaccaaagatcacagga 534
            | | | || |||||| |||| || | |||| |||| || |||||||||||||||||||||
Sbjct: 1089 gaacttccaaagcctcttggcttactttgggctttctgagaagcaccaaagatcacagga 1030

                                                                        
Query: 535  attagaagaacgcctcgtttgagcagttcagttcggtacctctcagctctttgcattgct 594
            ||||||||||| |||||||| ||||||||||| || || |||||||||||||||||||||
Sbjct: 1029 attagaagaacacctcgtttcagcagttcagtccgatatctctcagctctttgcattgct 970

                                                                        
Query: 595  tgagtaacagatgcttttgaacctgccaatataactggcctagtaatgtcccggagttgc 654
             ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 969  cgagtaatggatgcttttgaacctgccagtataactggcctagtaatgtcccggagttgc 910

                                                                
Query: 655  acaagttcagttatgcgattggttgacagacgcacaggtaaccttgaaaggg 706
            ||||| ||| | ||||||||||||||||| || |||||||||||||||||||
Sbjct: 909  acaagctcaataatgcgattggttgacaggcggacaggtaaccttgaaaggg 858

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  204 bits (103), Expect = 3e-49
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                            
Query: 443      ccccaattgaaggagctgatgcagcagatcttgtagtaccgaagccttttggtttgcctt 502
                |||||| |||||||||||||||||||||||||| | | || |||||| |||| || | ||
Sbjct: 14491691 ccccaactgaaggagctgatgcagcagatcttgaacttccaaagcctcttggcttacttt 14491750

                                                                            
Query: 503      ggactttttgtgaagcaccaaagatcacaggaattagaagaacgcctcgtttgagcagtt 562
                || |||| || |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 14491751 gggctttctgagaagcaccaaagatcacaggaattagaagaacacctcgtttcagcagtt 14491810

                                                                            
Query: 563      cagttcggtacctctcagctctttgcattgcttgagtaacagatgcttttgaacctgcca 622
                |||| || || ||||||||||||||||||||| ||||||  |||||||||||||||||||
Sbjct: 14491811 cagtccgatatctctcagctctttgcattgctcgagtaatggatgcttttgaacctgcca 14491870

                       
Query: 623      atataac 629
                 ||||||
Sbjct: 14491871 gtataac 14491877



 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                            
Query: 626      taactggcctagtaatgtcccggagttgcacaagttcagttatgcgattggttgacagac 685
                |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |
Sbjct: 14491991 taactggcctagtaatgtcccggagttgcacaagctcaataatgcgattggttgacaggc 14492050

                                     
Query: 686      gcacaggtaaccttgaaaggg 706
                | |||||||||||||||||||
Sbjct: 14492051 ggacaggtaaccttgaaaggg 14492071



 Score =  111 bits (56), Expect = 3e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 245      ctcttccggatcttctcacacgaccatcaagacggagaattatgtagacatcttcaccag 304
                ||||||| |||||||| ||||||||||| |  ||||| ||||| |||||||||||||| |
Sbjct: 14490143 ctcttccagatcttctgacacgaccatccaatcggaggattatatagacatcttcaccgg 14490202

                                                        
Query: 305      gagtgacaccttccgattcttgctgatcacgtatccaact 344
                ||||||||||||| || |||||||| ||||||||||||||
Sbjct: 14490203 gagtgacaccttcagactcttgctggtcacgtatccaact 14490242



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                            
Query: 343      ctttcccattgttctggagagacaatatcggctttaaatcgaacctcggctctgagtcgt 402
                |||||||||||||| |||||||||||||| || ||||||||  | || ||| | |  |||
Sbjct: 14491480 ctttcccattgttcaggagagacaatatcagccttaaatcgctcttcagcttttaaccgt 14491539

                                                      
Query: 403      gattttgccgcaatagattcagtacgtttttcaaagtc 440
                ||||| || ||||||||||||||||| || ||||||||
Sbjct: 14491540 gatttcgctgcaatagattcagtacgcttctcaaagtc 14491577



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                            
Query: 175      cgttcaagtttgctgagcaaatcttcaagacgtggcaattccttcaaaatatcattccag 234
                |||||||||||||| ||||  |||||||| ||||| | ||||| ||| || || ||||| 
Sbjct: 14489851 cgttcaagtttgctcagcagttcttcaagtcgtggaagttcctgcaatatgtcgttccaa 14489910

                           
Query: 235      tttggcatgcc 245
                |||||||||||
Sbjct: 14489911 tttggcatgcc 14489921

---

>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score =  204 bits (103), Expect = 3e-49
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                         
Query: 443   ccccaattgaaggagctgatgcagcagatcttgtagtaccgaagccttttggtttgcctt 502
             |||||| |||||||||||||||||||||||||| | | || |||||| |||| || | ||
Sbjct: 51004 ccccaactgaaggagctgatgcagcagatcttgaacttccaaagcctcttggcttacttt 51063

                                                                         
Query: 503   ggactttttgtgaagcaccaaagatcacaggaattagaagaacgcctcgtttgagcagtt 562
             || |||| || |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 51064 gggctttctgagaagcaccaaagatcacaggaattagaagaacacctcgtttcagcagtt 51123

                                                                         
Query: 563   cagttcggtacctctcagctctttgcattgcttgagtaacagatgcttttgaacctgcca 622
             |||| || || ||||||||||||||||||||| ||||||  |||||||||||||||||||
Sbjct: 51124 cagtccgatatctctcagctctttgcattgctcgagtaatggatgcttttgaacctgcca 51183

                    
Query: 623   atataac 629
              ||||||
Sbjct: 51184 gtataac 51190



 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                         
Query: 626   taactggcctagtaatgtcccggagttgcacaagttcagttatgcgattggttgacagac 685
             |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |
Sbjct: 51304 taactggcctagtaatgtcccggagttgcacaagctcaataatgcgattggttgacaggc 51363

                                  
Query: 686   gcacaggtaaccttgaaaggg 706
             | |||||||||||||||||||
Sbjct: 51364 ggacaggtaaccttgaaaggg 51384



 Score =  111 bits (56), Expect = 3e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                         
Query: 245   ctcttccggatcttctcacacgaccatcaagacggagaattatgtagacatcttcaccag 304
             ||||||| |||||||| ||||||||||| |  ||||| ||||| |||||||||||||| |
Sbjct: 49456 ctcttccagatcttctgacacgaccatccaatcggaggattatatagacatcttcaccgg 49515

                                                     
Query: 305   gagtgacaccttccgattcttgctgatcacgtatccaact 344
             ||||||||||||| || |||||||| ||||||||||||||
Sbjct: 49516 gagtgacaccttcagactcttgctggtcacgtatccaact 49555



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                         
Query: 343   ctttcccattgttctggagagacaatatcggctttaaatcgaacctcggctctgagtcgt 402
             |||||||||||||| |||||||||||||| || ||||||||  | || ||| | |  |||
Sbjct: 50793 ctttcccattgttcaggagagacaatatcagccttaaatcgctcttcagcttttaaccgt 50852

                                                   
Query: 403   gattttgccgcaatagattcagtacgtttttcaaagtc 440
             ||||| || ||||||||||||||||| || ||||||||
Sbjct: 50853 gatttcgctgcaatagattcagtacgcttctcaaagtc 50890



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 175   cgttcaagtttgctgagcaaatcttcaagacgtggcaattccttcaaaatatcattccag 234
             |||||||||||||| ||||  |||||||| ||||| | ||||| ||| || || ||||| 
Sbjct: 49164 cgttcaagtttgctcagcagttcttcaagtcgtggaagttcctgcaatatgtcgttccaa 49223

                        
Query: 235   tttggcatgcc 245
             |||||||||||
Sbjct: 49224 tttggcatgcc 49234

---

>ref|NM_193993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 813

 Score =  147 bits (74), Expect = 6e-32
 Identities = 107/118 (90%)
 Strand = Plus / Minus

                                                                       
Query: 501 ttggactttttgtgaagcaccaaagatcacaggaattagaagaacgcctcgtttgagcag 560
           |||| |||| || |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 765 ttgggctttctgagaagcaccaaagatcacaggaattagaagaacacctcgtttcagcag 706

                                                                     
Query: 561 ttcagttcggtacctctcagctctttgcattgcttgagtaacagatgcttttgaacct 618
           |||||| || || ||||||||||||||||||||| ||||||  |||||||||||||||
Sbjct: 705 ttcagtccgatatctctcagctctttgcattgctcgagtaatggatgcttttgaacct 648

---

>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025H06
          Length = 151547

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                          
Query: 175    cgttcaagtttgctgagcaaatcttcaagacgtggcaattccttcaaaatatcattccag 234
              |||||||||||||| ||||  |||||||| ||||| | ||||| ||| || || ||||| 
Sbjct: 151248 cgttcaagtttgctcagcagttcttcaagtcgtggaagttcctgcaatatgtcgttccaa 151307

                         
Query: 235    tttggcatgcc 245
              |||||||||||
Sbjct: 151308 tttggcatgcc 151318

---

>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177115

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 486   gccttttggtttgccttggacttttt 511
             |||||||||||||||||| |||||||
Sbjct: 15254 gccttttggtttgccttgtacttttt 15229

---

>ref|XM_649970.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative
            (37.t00031) partial mRNA
          Length = 1995

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 578  cagctctttgcattgcttgag 598
            |||||||||||||||||||||
Sbjct: 1045 cagctctttgcattgcttgag 1025

---

>ref|NM_205069.1| Gallus gallus integrin, alpha 1 (ITGA1), mRNA
          Length = 3926

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  ttccttcaaaatatcattcca 233
            |||||||||||||||||||||
Sbjct: 2950 ttccttcaaaatatcattcca 2970

---

>dbj|AB000470.1| Gallus gallus mRNA for alpha1 integrin, complete cds
          Length = 3926

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  ttccttcaaaatatcattcca 233
            |||||||||||||||||||||
Sbjct: 2950 ttccttcaaaatatcattcca 2970

---

>gb|AY772391.1| Danio rerio protocadherin 15b mRNA, complete cds
          Length = 6059

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   aagaccttcacctctgtttt 33
            ||||||||||||||||||||
Sbjct: 3723 aagaccttcacctctgtttt 3742

---

>ref|NM_117612.2| Arabidopsis thaliana transferase, transferring glycosyl groups
            AT4G15240 mRNA, complete cds
          Length = 1815

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  tcttccggatcttctcacac 265
            ||||||||||||||||||||
Sbjct: 1080 tcttccggatcttctcacac 1099

---

>gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0032D15,
              complete sequence
          Length = 161968

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     aacatgatggtcaatctctg 93
              ||||||||||||||||||||
Sbjct: 136227 aacatgatggtcaatctctg 136208

---

>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02,
            complete sequence
          Length = 109969

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   aacatgatggtcaatctctg 93
            ||||||||||||||||||||
Sbjct: 7854 aacatgatggtcaatctctg 7835

---

>gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, complete sequence
          Length = 181482

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 284    ttatgtagacatcttcaccaggag 307
              ||||| ||||||||||||||||||
Sbjct: 113028 ttatgaagacatcttcaccaggag 113051

---

>gb|AC006029.2| Homo sapiens BAC clone GS1-195F7 from 7q31.2-q32, complete sequence
          Length = 143851

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 284   ttatgtagacatcttcaccaggag 307
             ||||| ||||||||||||||||||
Sbjct: 36558 ttatgaagacatcttcaccaggag 36581

---

>ref|XM_503978.1| Yarrowia lipolytica CLIB122, YALI0E15334g predicted mRNA
          Length = 6225

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tctcagctctttgcattgct 594
            ||||||||||||||||||||
Sbjct: 2714 tctcagctctttgcattgct 2733

---

>emb|AL359708.8| Human DNA sequence from clone RP11-171O14 on chromosome 13 Contains
            the 5' end of the TGDS gene for dTDP-D-glucose
            4,6-dehydratase, a novel gene (possible ortholog of mouse
            AB041545), the gene for a novel protein similar to NADH
            dehydrogenase (ubiquinone) 1 alpha subcomplex 3 9kDa
            (NDUFA3) and a CpG island, complete sequence
          Length = 50083

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  ttcaaaatatcattccagtt 236
            ||||||||||||||||||||
Sbjct: 5063 ttcaaaatatcattccagtt 5044

---

>emb|AL359741.9| Human DNA sequence from clone RP11-161P17 on chromosome 13 Contains a
              novel pseudogene, complete sequence
          Length = 139877

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     aacatgatggtcaatctctg 93
              ||||||||||||||||||||
Sbjct: 126850 aacatgatggtcaatctctg 126831

---

>emb|AL356214.20| Human DNA sequence from clone RP11-30E16 on chromosome 10 Contains the
              C10orf3 gene for chromosome 10 open reading frame 3, the
              RBP4 gene for retinol binding protein 4 (plasma), the 5'
              end of the PDE6C gene for phosphodiesterase 6C
              (cGMP-specific, cone, alpha prime), the GPR120 gene for G
              protein-coupled receptor 120 and three CpG islands,
              complete sequence
          Length = 163964

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ccttcaaaatatcattccag 234
              ||||||||||||||||||||
Sbjct: 151151 ccttcaaaatatcattccag 151132

---

>emb|AL137250.17| Human DNA sequence from clone RP11-347L8 on chromosome 13, complete
             sequence
          Length = 110733

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 355   tctggagagacaatatcggcttta 378
             |||||||||||||||| |||||||
Sbjct: 96524 tctggagagacaatatgggcttta 96501

---

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    cggtacctctcagctctttg 587
              ||||||||||||||||||||
Sbjct: 318453 cggtacctctcagctctttg 318472

---

>emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in linkage group 5, complete
              sequence
          Length = 205761

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     tctgtttttgcataagaact 45
              ||||||||||||||||||||
Sbjct: 120213 tctgtttttgcataagaact 120232

---

>emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chromosome 11 Contains two
              novel genes, the 5' end of the Accn1 gene for neuronal
              amiloride-sensitive cation channel 1 (degenerin) and the
              Ccl2 and Ccl7 genes for chemokine (C-C motif) ligand 2 and
              7, complete sequence
          Length = 223726

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     atgatggtcaatctctgtgc 96
              ||||||||||||||||||||
Sbjct: 195825 atgatggtcaatctctgtgc 195844

---

>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence
          Length = 245991

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 596    gagtaacagatgcttttgaa 615
              ||||||||||||||||||||
Sbjct: 105109 gagtaacagatgcttttgaa 105128

---

>emb|BX957226.10| Zebrafish DNA sequence from clone CH211-110P13 in linkage group 5,
              complete sequence
          Length = 149414

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     tctgtttttgcataagaact 45
              ||||||||||||||||||||
Sbjct: 103930 tctgtttttgcataagaact 103949

---

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    agctgatgcagcagatcttg 475
              ||||||||||||||||||||
Sbjct: 887453 agctgatgcagcagatcttg 887434

---

>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence
          Length = 179810

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    ggagaattatgtagacatct 297
              ||||||||||||||||||||
Sbjct: 134386 ggagaattatgtagacatct 134367

---

>gb|AC020687.6| Homo sapiens chromosome 15, clone RP11-648K4, complete sequence
          Length = 169571

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 581    ctctttgcattgcttgagta 600
              ||||||||||||||||||||
Sbjct: 135262 ctctttgcattgcttgagta 135243

---

>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    ggagctgatgcagcagatct 473
              ||||||||||||||||||||
Sbjct: 702841 ggagctgatgcagcagatct 702860

---

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 139     ggaagaaaacgaaacccatatacacata 166
               ||||||||| ||||| ||||||||||||
Sbjct: 4937456 ggaagaaaaagaaacgcatatacacata 4937483

---

>gb|AC148671.1| Macaca mulatta Major Histocompatibility Complex BAC MMU065H09, complete
             sequence
          Length = 177726

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   tagacatcttcaccaggagt 308
             ||||||||||||||||||||
Sbjct: 86703 tagacatcttcaccaggagt 86722

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 74      aacatgatggtcaatctctg 93
               ||||||||||||||||||||
Sbjct: 9025857 aacatgatggtcaatctctg 9025838

---

>emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 in linkage group 12,
             complete sequence
          Length = 172778

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aagaccttcacctctgtttt 33
             ||||||||||||||||||||
Sbjct: 86523 aagaccttcacctctgtttt 86504

---

>emb|BX828237.1|CNS0A3YF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH66ZD08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2095

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  tcttccggatcttctcacac 265
            ||||||||||||||||||||
Sbjct: 1399 tcttccggatcttctcacac 1418

---

>ref|NM_001012486.1| Danio rerio protocadherin 15b (pcdh15b), mRNA
          Length = 6059

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   aagaccttcacctctgtttt 33
            ||||||||||||||||||||
Sbjct: 3723 aagaccttcacctctgtttt 3742

---

>dbj|AB124586.1| Pan troglodytes RBP4 gene for retinol binding protein4, complete cds
          Length = 173042

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   ccttcaaaatatcattccag 234
             ||||||||||||||||||||
Sbjct: 76761 ccttcaaaatatcattccag 76780

---

>ref|NM_211718.1| Eremothecium gossypii AGL010Wp (AGL010W), mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 ggagctgatgcagcagatct 473
           ||||||||||||||||||||
Sbjct: 51  ggagctgatgcagcagatct 70

---

>emb|BX537311.3| Mouse DNA sequence from clone RP24-315O23 on chromosome 4, complete
            sequence
          Length = 6715

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  acccatatacacatagtttt 171
            ||||||||||||||||||||
Sbjct: 4087 acccatatacacatagtttt 4068

---

>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3
          Length = 200252

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tcttccggatcttctcacac 265
             ||||||||||||||||||||
Sbjct: 68644 tcttccggatcttctcacac 68625

---

>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41
          Length = 197419

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tcttccggatcttctcacac 265
             ||||||||||||||||||||
Sbjct: 22121 tcttccggatcttctcacac 22102

---

>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete
            sequence
          Length = 202412

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  acccatatacacatagtttt 171
            ||||||||||||||||||||
Sbjct: 2093 acccatatacacatagtttt 2074

---

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 575     tctcagctctttgcattgct 594
               ||||||||||||||||||||
Sbjct: 1824564 tctcagctctttgcattgct 1824545

---

>emb|X94354.1|HSCGMPPDE H.sapiens DNA for Cone cGMP-PDE gene
          Length = 13975

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  ccttcaaaatatcattccag 234
            ||||||||||||||||||||
Sbjct: 8659 ccttcaaaatatcattccag 8640


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,616,239
Number of Sequences: 3902068
Number of extensions: 5616239
Number of successful extensions: 130034
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129803
Number of HSP's gapped (non-prelim): 231
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---