ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29p13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 456 bits (230), Expect = e-125 Identities = 383/434 (88%) Strand = Plus / Minus Query: 170 ttcttcctctcctgtgccaaacgacgatccttgttcagcttcagagctcttcctttctct 229 |||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||| Sbjct: 1739 ttcttcctctcctgggctaaacggcggtccttgttcaactttagagctcttcctttctct 1680 Query: 230 tctccagatctaaagattttcttgtcattcgatgacagcgtttcagccttgtcagccttg 289 || ||||| || ||||||||||| ||| | |||||||| |||||||| ||||||| ||| Sbjct: 1679 tcaccagacctgaagattttcttatcagtggatgacagagtttcagctttgtcagtctta 1620 Query: 290 atgttgaagatatcttgaagaagtccattgtcctgcacatgcttcaggaagcctctcccg 349 |||| || | |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1619 atgtcaaacacatcttgaagaagtccattctcctgcacatgcttgaggaagcctctccca 1560 Query: 350 aggaaacgcttgaagaagttcaactgaatcaattcagaccatgatgcaacccttagaaca 409 || || ||| | |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1559 agaaaccgcctcaagaagttcaactgaatcaattcagaccatgatgacacccttaaaacg 1500 Query: 410 tcacgttttccagcaatcttcagtgattcttcagggcactcaccatacttgacaaaatcc 469 ||||| ||||| | |||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 1499 tcacgctttcctgaaatcttaacagattcttcagggcactcaccatacttaacaaaatcc 1440 Query: 470 aaaatccgttgaaacagatctctttggtcagaaagatttttcttgtctgcacctttcccc 529 || |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 1439 aagatccgttgaaacagatctctttggtcagtaagatttttcttatctgcacctttaccc 1380 Query: 530 cctgcctccgcagagagatttgaggcaagaccagctatcttggctttcaatgcttgcata 589 ||||||||| |||||||| |||||||||| | ||| ||||||||||| ||||||||| Sbjct: 1379 cctgcctccattgagagattggaggcaagacttgatattttggctttcaaagcttgcata 1320 Query: 590 tccaggaaaagttt 603 |||||||||||||| Sbjct: 1319 tccaggaaaagttt 1306
>dbj|AK099482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G13, full insert sequence Length = 2049 Score = 456 bits (230), Expect = e-125 Identities = 383/434 (88%) Strand = Plus / Minus Query: 170 ttcttcctctcctgtgccaaacgacgatccttgttcagcttcagagctcttcctttctct 229 |||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||| Sbjct: 1739 ttcttcctctcctgggctaaacggcggtccttgttcaactttagagctcttcctttctct 1680 Query: 230 tctccagatctaaagattttcttgtcattcgatgacagcgtttcagccttgtcagccttg 289 || ||||| || ||||||||||| ||| | |||||||| |||||||| ||||||| ||| Sbjct: 1679 tcaccagacctgaagattttcttatcagtggatgacagagtttcagctttgtcagtctta 1620 Query: 290 atgttgaagatatcttgaagaagtccattgtcctgcacatgcttcaggaagcctctcccg 349 |||| || | |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1619 atgtcaaacacatcttgaagaagtccattctcctgcacatgcttgaggaagcctctccca 1560 Query: 350 aggaaacgcttgaagaagttcaactgaatcaattcagaccatgatgcaacccttagaaca 409 || || ||| | |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1559 agaaaccgcctcaagaagttcaactgaatcaattcagaccatgatgacacccttaaaacg 1500 Query: 410 tcacgttttccagcaatcttcagtgattcttcagggcactcaccatacttgacaaaatcc 469 ||||| ||||| | |||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 1499 tcacgctttcctgaaatcttaacagattcttcagggcactcaccatacttaacaaaatcc 1440 Query: 470 aaaatccgttgaaacagatctctttggtcagaaagatttttcttgtctgcacctttcccc 529 || |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 1439 aagatccgttgaaacagatctctttggtcagtaagatttttcttatctgcacctttaccc 1380 Query: 530 cctgcctccgcagagagatttgaggcaagaccagctatcttggctttcaatgcttgcata 589 ||||||||| |||||||| |||||||||| | ||| ||||||||||| ||||||||| Sbjct: 1379 cctgcctccattgagagattggaggcaagacttgatattttggctttcaaagcttgcata 1320 Query: 590 tccaggaaaagttt 603 |||||||||||||| Sbjct: 1319 tccaggaaaagttt 1306
>gb|AY107585.1| Zea mays PCO065045 mRNA sequence Length = 695 Score = 238 bits (120), Expect = 2e-59 Identities = 237/276 (85%) Strand = Plus / Plus Query: 210 tcagagctcttcctttctcttctccagatctaaagattttcttgtcattcgatgacagcg 269 ||||||||||| |||| || ||| |||| ||||| |||||||| ||| | || |||| | Sbjct: 414 tcagagctctttctttttcctcttcagacctaaaaattttcttatcagtggacgacaagg 473 Query: 270 tttcagccttgtcagccttgatgttgaagatatcttgaagaagtccattgtcctgcacat 329 |||||| |||||| |||| |||| |||||||| |||||||||||||| |||||||||| Sbjct: 474 tttcagttttgtcaaccttaatgtcaaagatatcctgaagaagtccattctcctgcacat 533 Query: 330 gcttcaggaagcctctcccgaggaaacgcttgaagaagttcaactgaatcaattcagacc 389 ||||||| |||||| |||| ||||| || || ||||| |||||||| || |||||||||| Sbjct: 534 gcttcagaaagcctttccccaggaaccgttttaagaaattcaactggattaattcagacc 593 Query: 390 atgatgcaacccttagaacatcacgttttccagcaatcttcagtgattcttcagggcact 449 | |||| ||||||| |||||||||||||||||||||||| | ||||||||||||||| | Sbjct: 594 acgatgacacccttaaaacatcacgttttccagcaatcttgattgattcttcagggcatt 653 Query: 450 caccatacttgacaaaatccaaaatccgttgaaaca 485 ||||||||||||||||||| || || |||||||||| Sbjct: 654 caccatacttgacaaaatctaagattcgttgaaaca 689
>gb|AY111058.1| Zea mays CL51637_1 mRNA sequence Length = 646 Score = 200 bits (101), Expect = 4e-48 Identities = 209/247 (84%) Strand = Plus / Plus Query: 278 ttgtcagccttgatgttgaagatatcttgaagaagtccattgtcctgcacatgcttcagg 337 |||||| |||| |||| || ||||| |||||||||||||| ||||| ||||||||||| Sbjct: 385 ttgtcaaccttaatgtcaaatatatcctgaagaagtccattctcctgaacatgcttcaga 444 Query: 338 aagcctctcccgaggaaacgcttgaagaagttcaactgaatcaattcagaccatgatgca 397 |||||| |||| || || ||||| ||||| |||||||| || |||||||||||||| | Sbjct: 445 aagcctttccccagaaaccgctttaagaaattcaactggattaattcagaccatgacgac 504 Query: 398 acccttagaacatcacgttttccagcaatcttcagtgattcttcagggcactcaccatac 457 ||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 505 acccttaaaacatcacgttttccagcaatcttgattgattcttcagggcagtcaccatac 564 Query: 458 ttgacaaaatccaaaatccgttgaaacagatctctttggtcagaaagatttttcttgtct 517 ||||||||||| || |||| |||||| | |||||||| |||| ||| ||||||| Sbjct: 565 ttgacaaaatctaagatcctttgaaataagtctctttgatcagtaagnnnnnncttgtct 624 Query: 518 gcacctt 524 ||||||| Sbjct: 625 gcacctt 631
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 180 bits (91), Expect = 4e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 461 acaaaatccaaaatccgttgaaacagatctctttggtcagaaagatttttcttgtctgca 520 ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 23875743 acaaaatccaagatccgttgaaacagatctctttggtcagtaagatttttcttatctgca 23875684 Query: 521 cctttcccccctgcctccgcagagagatttgaggcaagaccagctatcttggctttcaat 580 ||||| |||||||||||| |||||||| |||||||||| | ||| ||||||||||| Sbjct: 23875683 cctttaccccctgcctccattgagagattggaggcaagacttgatattttggctttcaaa 23875624 Query: 581 gcttgcatatccaggaaaagttt 603 ||||||||||||||||||||||| Sbjct: 23875623 gcttgcatatccaggaaaagttt 23875601 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 373 ctgaatcaattcagaccatgatgcaacccttagaacatcacgttttccagcaatcttcag 432 ||||||||||||||||||||||| ||||||| ||| ||||| ||||| | |||||| | Sbjct: 23875917 ctgaatcaattcagaccatgatgacacccttaaaacgtcacgctttcctgaaatcttaac 23875858 Query: 433 tgattcttcagggcactcaccatact 458 ||||||||||||||||||||||||| Sbjct: 23875857 agattcttcagggcactcaccatact 23875832 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 ||||| || |||||||||| ||| |||||||||||||||||||| ||||| || |||||| Sbjct: 23876884 aaacggcggtccttgttcaactttagagctcttcctttctcttcaccagacctgaagatt 23876825 Query: 248 ttct 251 |||| Sbjct: 23876824 ttct 23876821 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 260 gatgacagcgtttcagccttgtcagccttgatgttgaagatatcttgaagaagtccattg 319 |||||||| |||||||| ||||||| ||| |||| || | |||||||||||||||||| Sbjct: 23876204 gatgacagagtttcagctttgtcagtcttaatgtcaaacacatcttgaagaagtccattc 23876145 Query: 320 tcctgca 326 ||||||| Sbjct: 23876144 tcctgca 23876138 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 cctgcacatgcttcaggaagcctctcccgaggaaacgcttgaagaagttcaact 374 ||||||||||||| |||||||||||||| || || ||| | ||||||||||||| Sbjct: 23876053 cctgcacatgcttgaggaagcctctcccaagaaaccgcctcaagaagttcaact 23876000
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 180 bits (91), Expect = 4e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 461 acaaaatccaaaatccgttgaaacagatctctttggtcagaaagatttttcttgtctgca 520 ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 30670 acaaaatccaagatccgttgaaacagatctctttggtcagtaagatttttcttatctgca 30611 Query: 521 cctttcccccctgcctccgcagagagatttgaggcaagaccagctatcttggctttcaat 580 ||||| |||||||||||| |||||||| |||||||||| | ||| ||||||||||| Sbjct: 30610 cctttaccccctgcctccattgagagattggaggcaagacttgatattttggctttcaaa 30551 Query: 581 gcttgcatatccaggaaaagttt 603 ||||||||||||||||||||||| Sbjct: 30550 gcttgcatatccaggaaaagttt 30528 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 373 ctgaatcaattcagaccatgatgcaacccttagaacatcacgttttccagcaatcttcag 432 ||||||||||||||||||||||| ||||||| ||| ||||| ||||| | |||||| | Sbjct: 30844 ctgaatcaattcagaccatgatgacacccttaaaacgtcacgctttcctgaaatcttaac 30785 Query: 433 tgattcttcagggcactcaccatact 458 ||||||||||||||||||||||||| Sbjct: 30784 agattcttcagggcactcaccatact 30759 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 ||||| || |||||||||| ||| |||||||||||||||||||| ||||| || |||||| Sbjct: 31811 aaacggcggtccttgttcaactttagagctcttcctttctcttcaccagacctgaagatt 31752 Query: 248 ttct 251 |||| Sbjct: 31751 ttct 31748 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 260 gatgacagcgtttcagccttgtcagccttgatgttgaagatatcttgaagaagtccattg 319 |||||||| |||||||| ||||||| ||| |||| || | |||||||||||||||||| Sbjct: 31131 gatgacagagtttcagctttgtcagtcttaatgtcaaacacatcttgaagaagtccattc 31072 Query: 320 tcctgca 326 ||||||| Sbjct: 31071 tcctgca 31065 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 cctgcacatgcttcaggaagcctctcccgaggaaacgcttgaagaagttcaact 374 ||||||||||||| |||||||||||||| || || ||| | ||||||||||||| Sbjct: 30980 cctgcacatgcttgaggaagcctctcccaagaaaccgcctcaagaagttcaact 30927
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 180 bits (91), Expect = 4e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 461 acaaaatccaaaatccgttgaaacagatctctttggtcagaaagatttttcttgtctgca 520 ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 64243 acaaaatccaagatccgttgaaacagatctctttggtcagtaagatttttcttatctgca 64184 Query: 521 cctttcccccctgcctccgcagagagatttgaggcaagaccagctatcttggctttcaat 580 ||||| |||||||||||| |||||||| |||||||||| | ||| ||||||||||| Sbjct: 64183 cctttaccccctgcctccattgagagattggaggcaagacttgatattttggctttcaaa 64124 Query: 581 gcttgcatatccaggaaaagttt 603 ||||||||||||||||||||||| Sbjct: 64123 gcttgcatatccaggaaaagttt 64101 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 373 ctgaatcaattcagaccatgatgcaacccttagaacatcacgttttccagcaatcttcag 432 ||||||||||||||||||||||| ||||||| ||| ||||| ||||| | |||||| | Sbjct: 64417 ctgaatcaattcagaccatgatgacacccttaaaacgtcacgctttcctgaaatcttaac 64358 Query: 433 tgattcttcagggcactcaccatact 458 ||||||||||||||||||||||||| Sbjct: 64357 agattcttcagggcactcaccatact 64332 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 ||||| || |||||||||| ||| |||||||||||||||||||| ||||| || |||||| Sbjct: 65384 aaacggcggtccttgttcaactttagagctcttcctttctcttcaccagacctgaagatt 65325 Query: 248 ttct 251 |||| Sbjct: 65324 ttct 65321 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 260 gatgacagcgtttcagccttgtcagccttgatgttgaagatatcttgaagaagtccattg 319 |||||||| |||||||| ||||||| ||| |||| || | |||||||||||||||||| Sbjct: 64704 gatgacagagtttcagctttgtcagtcttaatgtcaaacacatcttgaagaagtccattc 64645 Query: 320 tcctgca 326 ||||||| Sbjct: 64644 tcctgca 64638 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 cctgcacatgcttcaggaagcctctcccgaggaaacgcttgaagaagttcaact 374 ||||||||||||| |||||||||||||| || || ||| | ||||||||||||| Sbjct: 64553 cctgcacatgcttgaggaagcctctcccaagaaaccgcctcaagaagttcaact 64500
>ref|XM_468892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2445 Score = 125 bits (63), Expect = 2e-25 Identities = 327/415 (78%) Strand = Plus / Minus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 |||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 1498 aaacgacgctccttattcaactttagagctcttcctttctcttctccagacctatagatt 1439 Query: 248 ttcttgtcattcgatgacagcgtttcagccttgtcagccttgatgttgaagatatcttga 307 ||||| ||| | | ||||| |||||| || || ||||||| |||||||| || Sbjct: 1438 ttcttttcagtggttgacatgttttcagttttatccattttgatgtcaaagatatcatgt 1379 Query: 308 agaagtccattgtcctgcacatgcttcaggaagcctctcccgaggaaacgcttgaagaag 367 || | ||||||||| || |||||||||| || |||| ||| ||||| ||| | || || Sbjct: 1378 agcaatccattgtcttgtgcatgcttcagaaatcctcgcccaaggaaccgcctcaaatag 1319 Query: 368 ttcaactgaatcaattcagaccatgatgcaacccttagaacatcacgttttccagcaatc 427 |||||||| || ||||| |||||||| ||| |||| || | || | || || ||||| Sbjct: 1318 ttcaactgtattgattcacgccatgatgtaactcttaaaataccatgcttgcctgcaatt 1259 Query: 428 ttcagtgattcttcagggcactcaccatacttgacaaaatccaaaatccgttgaaacaga 487 | |||||||||||| ||||||||||| ||| | |||||| | || ||||| || | Sbjct: 1258 ctaagtgattcttcaaggcactcaccagtcttaataaaatctgagattcgttggaataag 1199 Query: 488 tctctttggtcagaaagatttttcttgtctgcacctttcccccctgcctccgcagagaga 547 |||||||| ||| |||||||||||||| |||||| | ||||| || ||| ||||||| Sbjct: 1198 tctctttgatcattcagatttttcttgtcagcacctcttccccccgcttccatagagaga 1139 Query: 548 tttgaggcaagaccagctatcttggctttcaatgcttgcatatccaggaaaagtt 602 || || | ||||||| ||| ||||| |||||||||||||||| || |||||||| Sbjct: 1138 ttatagactagaccagatattttggccttcaatgcttgcatattcaagaaaagtt 1084
>dbj|AK102551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097C13, full insert sequence Length = 1741 Score = 125 bits (63), Expect = 2e-25 Identities = 327/415 (78%) Strand = Plus / Minus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 |||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 1496 aaacgacgctccttattcaactttagagctcttcctttctcttctccagacctatagatt 1437 Query: 248 ttcttgtcattcgatgacagcgtttcagccttgtcagccttgatgttgaagatatcttga 307 ||||| ||| | | ||||| |||||| || || ||||||| |||||||| || Sbjct: 1436 ttcttttcagtggttgacatgttttcagttttatccattttgatgtcaaagatatcatgt 1377 Query: 308 agaagtccattgtcctgcacatgcttcaggaagcctctcccgaggaaacgcttgaagaag 367 || | ||||||||| || |||||||||| || |||| ||| ||||| ||| | || || Sbjct: 1376 agcaatccattgtcttgtgcatgcttcagaaatcctcgcccaaggaaccgcctcaaatag 1317 Query: 368 ttcaactgaatcaattcagaccatgatgcaacccttagaacatcacgttttccagcaatc 427 |||||||| || ||||| |||||||| ||| |||| || | || | || || ||||| Sbjct: 1316 ttcaactgtattgattcacgccatgatgtaactcttaaaataccatgcttgcctgcaatt 1257 Query: 428 ttcagtgattcttcagggcactcaccatacttgacaaaatccaaaatccgttgaaacaga 487 | |||||||||||| ||||||||||| ||| | |||||| | || ||||| || | Sbjct: 1256 ctaagtgattcttcaaggcactcaccagtcttaataaaatctgagattcgttggaataag 1197 Query: 488 tctctttggtcagaaagatttttcttgtctgcacctttcccccctgcctccgcagagaga 547 |||||||| ||| |||||||||||||| |||||| | ||||| || ||| ||||||| Sbjct: 1196 tctctttgatcattcagatttttcttgtcagcacctcttccccccgcttccatagagaga 1137 Query: 548 tttgaggcaagaccagctatcttggctttcaatgcttgcatatccaggaaaagtt 602 || || | ||||||| ||| ||||| |||||||||||||||| || |||||||| Sbjct: 1136 ttatagactagaccagatattttggccttcaatgcttgcatattcaagaaaagtt 1082
>gb|AY110690.1| Zea mays CL29906_1 mRNA sequence Length = 710 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 172 cttcctctcctgtgccaaacgacgatccttgttcagcttcagagctcttcctttctcttc 231 |||||||||||| || | |||||| || || |||| |||||||||||||||||||||||| Sbjct: 254 cttcctctcctgagctagacgacgctctttattcaacttcagagctcttcctttctcttc 313 Query: 232 tccagatctaaagattttctt 252 ||||||||| || |||||||| Sbjct: 314 tccagatctgaacattttctt 334 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 431 agtgattcttcagggcactcacca 454 |||||||||||||||||||||||| Sbjct: 513 agtgattcttcagggcactcacca 536 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 575 ttcaatgcttgcatatccaggaaaagtt 602 |||||||||||||||| || |||||||| Sbjct: 657 ttcaatgcttgcatattcaagaaaagtt 684
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 |||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 19010125 aaacgacgctccttattcaactttagagctcttcctttctcttctccagacctatagatt 19010184 Query: 248 ttct 251 |||| Sbjct: 19010185 ttct 19010188 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 503 agatttttcttgtctgcacctttcccccctgcctccgcagagagatttgaggcaagacca 562 |||||||||||||| |||||| | ||||| || ||| ||||||||| || | |||||| Sbjct: 19012398 agatttttcttgtcagcacctcttccccccgcttccatagagagattatagactagacca 19012457 Query: 563 gctatcttggctttcaatgcttgcatatccaggaaaagtt 602 | ||| ||||| |||||||||||||||| || |||||||| Sbjct: 19012458 gatattttggccttcaatgcttgcatattcaagaaaagtt 19012497 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 agtgattcttcagggcactcacca 454 |||||||||||| ||||||||||| Sbjct: 19012245 agtgattcttcaaggcactcacca 19012268
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 |||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 147452 aaacgacgctccttattcaactttagagctcttcctttctcttctccagacctatagatt 147393 Query: 248 ttct 251 |||| Sbjct: 147392 ttct 147389 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 503 agatttttcttgtctgcacctttcccccctgcctccgcagagagatttgaggcaagacca 562 |||||||||||||| |||||| | ||||| || ||| ||||||||| || | |||||| Sbjct: 145179 agatttttcttgtcagcacctcttccccccgcttccatagagagattatagactagacca 145120 Query: 563 gctatcttggctttcaatgcttgcatatccaggaaaagtt 602 | ||| ||||| |||||||||||||||| || |||||||| Sbjct: 145119 gatattttggccttcaatgcttgcatattcaagaaaagtt 145080 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 431 agtgattcttcagggcactcacca 454 |||||||||||| ||||||||||| Sbjct: 145332 agtgattcttcaaggcactcacca 145309
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 188 aaacgacgatccttgttcagcttcagagctcttcctttctcttctccagatctaaagatt 247 |||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 19004166 aaacgacgctccttattcaactttagagctcttcctttctcttctccagacctatagatt 19004225 Query: 248 ttct 251 |||| Sbjct: 19004226 ttct 19004229 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 503 agatttttcttgtctgcacctttcccccctgcctccgcagagagatttgaggcaagacca 562 |||||||||||||| |||||| | ||||| || ||| ||||||||| || | |||||| Sbjct: 19006439 agatttttcttgtcagcacctcttccccccgcttccatagagagattatagactagacca 19006498 Query: 563 gctatcttggctttcaatgcttgcatatccaggaaaagtt 602 | ||| ||||| |||||||||||||||| || |||||||| Sbjct: 19006499 gatattttggccttcaatgcttgcatattcaagaaaagtt 19006538 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 agtgattcttcagggcactcacca 454 |||||||||||| ||||||||||| Sbjct: 19006286 agtgattcttcaaggcactcacca 19006309
>gb|AC123597.9| Mus musculus chromosome 8, clone RP23-134A7, complete sequence Length = 172297 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 66 tacacagatataaataaataaattcca 92 ||||||||||||||||||||||||||| Sbjct: 42993 tacacagatataaataaataaattcca 43019
>gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207366 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 120 atgaggttttgttttgtttccttt 143 |||||||||||||||||||||||| Sbjct: 161353 atgaggttttgttttgtttccttt 161376
>gb|AC131740.3| Mus musculus BAC clone RP23-85D12 from chromosome 2, complete sequence Length = 158830 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 aacaagtcaggaaggagcaagct 39 ||||||||||||||||||||||| Sbjct: 104919 aacaagtcaggaaggagcaagct 104897
>emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chromosome 10 Contains the gene for a novel protein similar to lysozyme C-1 (1 4-beta-N-acylmuramidase C EC 3.2.1.17) (MGC33408), three novel genes and a supervillin pseudogene (SVIL), complete sequence Length = 172779 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 ataaataaataaattccagctca 97 ||||||||||||||||||||||| Sbjct: 54064 ataaataaataaattccagctca 54086
>emb|AL353590.14| Human DNA sequence from clone RP11-420P23 on chromosome 9, complete sequence Length = 159927 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 120 atgaggttttgttttgtttcctt 142 ||||||||||||||||||||||| Sbjct: 41125 atgaggttttgttttgtttcctt 41103
>emb|AL928871.5| Mouse DNA sequence from clone RP23-350F2 on chromosome 2, complete sequence Length = 133330 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 aacaagtcaggaaggagcaagct 39 ||||||||||||||||||||||| Sbjct: 52848 aacaagtcaggaaggagcaagct 52826
>gb|AC131720.2| Mus musculus BAC clone RP23-137I3 from chromosome 10, complete sequence Length = 207949 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 acacagatataaataaataaat 88 |||||||||||||||||||||| Sbjct: 141797 acacagatataaataaataaat 141776
>gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosome 16, complete sequence Length = 182676 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 acacagatataaataaataaat 88 |||||||||||||||||||||| Sbjct: 137033 acacagatataaataaataaat 137012
>gb|AC130886.3| Homo sapiens X BAC RP11-361B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 79337 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 atataaataaataaattccagc 94 |||||||||||||||||||||| Sbjct: 34306 atataaataaataaattccagc 34327
>gb|AC090448.5| Homo sapiens chromosome 8, clone RP11-142M8, complete sequence Length = 82020 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 atgaggttttgttttgtttcctttct 145 ||||||||||||||||||| |||||| Sbjct: 18137 atgaggttttgttttgttttctttct 18162
>gb|AC012213.8| Homo sapiens chromosome , clone RP11-1C8, complete sequence Length = 176922 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 atgaggttttgttttgtttcctttct 145 ||||||||||||||||||| |||||| Sbjct: 31805 atgaggttttgttttgttttctttct 31780
>gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome 13, complete sequence Length = 157775 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 458 ttgacaaaatccaaaatccgtt 479 |||||||||||||||||||||| Sbjct: 53649 ttgacaaaatccaaaatccgtt 53628
>emb|AL928732.7| Mouse DNA sequence from clone RP23-403C18 on chromosome 2, complete sequence Length = 149273 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttctc 146 |||||||||||||||||||||| Sbjct: 63354 gttttgttttgtttcctttctc 63375
>gb|AC168058.4| Mus musculus BAC clone RP24-134D11 from chromosome 10, complete sequence Length = 199406 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 acacagatataaataaataaat 88 |||||||||||||||||||||| Sbjct: 184248 acacagatataaataaataaat 184269
>dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1735D4 Length = 212373 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 atgaggttttgttttgtttcctttct 145 ||||||||||||||||||| |||||| Sbjct: 80543 atgaggttttgttttgttttctttct 80568
>ref|XM_517799.1| PREDICTED: Pan troglodytes similar to Oral-facial-digital syndrome 1 protein (Protein 71-7A) (LOC461914), mRNA Length = 3018 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 caatcttcagtgattcttcag 443 ||||||||||||||||||||| Sbjct: 2788 caatcttcagtgattcttcag 2768
>gb|AC101908.8| Mus musculus chromosome 1, clone RP24-275J1, complete sequence Length = 164826 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 154249 gttttgttttgtttcctttct 154269
>gb|AC102916.5| Mus musculus chromosome 5, clone RP24-274I18, complete sequence Length = 144142 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ttacacagatataaataaata 85 ||||||||||||||||||||| Sbjct: 63528 ttacacagatataaataaata 63508
>gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, complete sequence Length = 228427 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 121 tgaggttttgttttgtttcctttct 145 ||||||||||||||||| ||||||| Sbjct: 99195 tgaggttttgttttgttgcctttct 99171
>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence Length = 216399 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 212251 gttttgttttgtttcctttct 212271
>ref|NM_007499.1| Mus musculus ataxia telangiectasia mutated homolog (human) (Atm), mRNA Length = 9620 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 aaggagcaagctctaaggacattct 52 |||||||| |||||||||||||||| Sbjct: 6796 aaggagcatgctctaaggacattct 6820
>gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome 18, complete sequence Length = 246348 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 168501 gttttgttttgtttcctttct 168481
>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8, complete sequence Length = 173122 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cacagatataaataaataaat 88 ||||||||||||||||||||| Sbjct: 1680 cacagatataaataaataaat 1700
>ref|XM_384920.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG04744.1) partial mRNA Length = 1662 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tcagccttgtcagccttgatgttga 296 |||||||| |||||||||||||||| Sbjct: 956 tcagccttttcagccttgatgttga 932
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 tgaggttttgttttgtttcctttct 145 |||| |||||||||||||||||||| Sbjct: 7201 tgagtttttgttttgtttcctttct 7225
>ref|XM_538452.2| PREDICTED: Canis familiaris similar to mitogen-activated protein kinase kinase kinase kinase 4 isoform 2 (LOC481331), mRNA Length = 4139 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 4036 gttttgttttgtttcctttct 4056
>gb|AC002429.1| Homo sapiens BAC clone GS1-200K5 from 7, complete sequence Length = 234053 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 gatgaggttttgttttgtttccttt 143 |||||||| |||||||||||||||| Sbjct: 145300 gatgaggtcttgttttgtttccttt 145324
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttctcgtt 149 |||||||||||||||||||| |||| Sbjct: 80242 gttttgttttgtttcctttcacgtt 80218
>gb|AC158580.3| Mus musculus chromosome 1, clone RP24-97G17, complete sequence Length = 159618 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 86312 gttttgttttgtttcctttct 86292
>emb|AL606477.11| Human DNA sequence from clone RP11-190H11 on chromosome 1 Contains the 5' end of the gene for HP1-BP74, the 3' end of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3 and three CpG islands, complete sequence Length = 139961 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ataaataaataaattccagct 95 ||||||||||||||||||||| Sbjct: 40830 ataaataaataaattccagct 40810
>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete sequence Length = 119664 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ttcagggcactcaccatactt 459 ||||||||||||||||||||| Sbjct: 57247 ttcagggcactcaccatactt 57267
>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a novel gene, part of a novel gene (LOC284757) and a CpG island, complete sequence Length = 118873 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 455 tacttgacaaaatccaaaatccgtt 479 ||||||||||||| ||||||||||| Sbjct: 105855 tacttgacaaaattcaaaatccgtt 105831
>gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 225052 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttctc 146 ||||||||||||||||||||| Sbjct: 195921 ttttgttttgtttcctttctc 195941
>emb|BX511148.7| Zebrafish DNA sequence from clone DKEY-174N20 in linkage group 5, complete sequence Length = 162495 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 ccccctgcctccgcagagaga 547 ||||||||||||||||||||| Sbjct: 114552 ccccctgcctccgcagagaga 114532
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 tgatgttgaagatatcttgaa 308 ||||||||||||||||||||| Sbjct: 3192 tgatgttgaagatatcttgaa 3212
>gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, complete sequence Length = 143494 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 ttcagagctcttcctttctcttctc 233 |||| |||||||||||||||||||| Sbjct: 131267 ttcatagctcttcctttctcttctc 131243
>gb|AC025449.6| Homo sapiens chromosome 5 clone CTD-2124B8, complete sequence Length = 199036 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 caatcttcagtgattcttcag 443 ||||||||||||||||||||| Sbjct: 65008 caatcttcagtgattcttcag 64988
>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete sequence Length = 236374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 50532 gttttgttttgtttcctttct 50552
>gb|AC079869.22|AC079869 Mus musculus 9 BAC RP23-49M18 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 243675 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 aaggagcaagctctaaggacattct 52 |||||||| |||||||||||||||| Sbjct: 75243 aaggagcatgctctaaggacattct 75267
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 100162 gttttgttttgtttcctttct 100142
>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence Length = 175708 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 aaggagcaagctctaaggacattct 52 |||||||| |||||||||||||||| Sbjct: 151353 aaggagcatgctctaaggacattct 151377
>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence Length = 163994 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ataaataaataaattccagct 95 ||||||||||||||||||||| Sbjct: 102003 ataaataaataaattccagct 102023
>ref|NG_003023.1| Homo sapiens OFD1 pseudogene 1 (OFD1P1) on chromosome 5 Length = 3645 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 caatcttcagtgattcttcag 443 ||||||||||||||||||||| Sbjct: 3206 caatcttcagtgattcttcag 3186
>ref|XM_216340.3| PREDICTED: Rattus norvegicus AT rich interactive domain 1A (Swi1 like) (predicted) (Arid1a_predicted), mRNA Length = 8527 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 8274 gttttgttttgtttcctttct 8294
>emb|BX296519.3| Zebrafish DNA sequence from clone CH211-278N7, complete sequence Length = 99968 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cacagatataaataaataaat 88 ||||||||||||||||||||| Sbjct: 61483 cacagatataaataaataaat 61503
>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete sequence Length = 144566 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 139701 gttttgttttgtttcctttct 139721
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 49093 gttttgttttgtttcctttct 49113
>emb|BX571881.6| Zebrafish DNA sequence from clone DKEY-251M4 in linkage group 18, complete sequence Length = 100776 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 cacagatataaataaataaat 88 ||||||||||||||||||||| Sbjct: 48037 cacagatataaataaataaat 48017
>dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727A23, complete sequence Length = 174905 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttcctttc 144 ||||||||||||||||||||| Sbjct: 90757 ggttttgttttgtttcctttc 90777
>gb|U43678.1|MMU43678 Mus musculus ataxia telangiectasia gene homolog (Atm) mRNA, complete cds Length = 9620 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 aaggagcaagctctaaggacattct 52 |||||||| |||||||||||||||| Sbjct: 6796 aaggagcatgctctaaggacattct 6820
>emb|AL805955.26| Mouse DNA sequence from clone RP23-192A6 on chromosome 2, complete sequence Length = 182439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 111529 gttttgttttgtttcctttct 111509
>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete sequence Length = 194387 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 201 tgttcagcttcagagctcttccttt 225 ||||||||||||||| ||||||||| Sbjct: 135729 tgttcagcttcagaggtcttccttt 135705
>gb|AC134590.5| Mus musculus BAC clone RP23-368K22 from 9, complete sequence Length = 180271 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttct 145 ||||||||||||||||||||| Sbjct: 69121 gttttgttttgtttcctttct 69141
>gb|AC154540.2| Mus musculus BAC clone RP23-452G1 from chromosome 16, complete sequence Length = 171663 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 tgaggttttgttttgtttcctttct 145 |||| |||||||||||||||||||| Sbjct: 148416 tgagtttttgttttgtttcctttct 148440
>emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chromosome 1, complete sequence Length = 150434 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ataaataaataaattccagct 95 ||||||||||||||||||||| Sbjct: 147696 ataaataaataaattccagct 147676
>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete sequence Length = 132371 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 atcttgaagaagtccattgtcctg 324 |||||||||||| ||||||||||| Sbjct: 16402 atcttgaagaaggccattgtcctg 16425
>gb|AC164574.15| Mus musculus 6 BAC RP23-446I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188358 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tttgttttgtttcctttctc 146 |||||||||||||||||||| Sbjct: 90207 tttgttttgtttcctttctc 90188
>gb|DQ219803.1| Sendai virus strain BB1, complete genome Length = 15384 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tccagcaatcttcagtgatt 437 |||||||||||||||||||| Sbjct: 5012 tccagcaatcttcagtgatt 4993
>gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205032 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tttgttttgtttcctttctc 146 |||||||||||||||||||| Sbjct: 37737 tttgttttgtttcctttctc 37756
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 562557 ggttttgttttgtttccttt 562576
>gb|AC120398.10| Mus musculus chromosome 3, clone RP24-333H9, complete sequence Length = 153725 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 122571 ggttttgttttgtttccttt 122590
>gb|AY591687.1| Mus musculus clone IgK9-119 immunoglobulin kappa-like gene, partial sequence Length = 4306 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tttgttttgtttcctttctc 146 |||||||||||||||||||| Sbjct: 3410 tttgttttgtttcctttctc 3391
>gb|AC167961.2| Mus musculus chromosome 1, clone wi1-1757K17, complete sequence Length = 41961 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttc 144 |||||||||||||||||||| Sbjct: 22134 gttttgttttgtttcctttc 22115
>gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037B06 map near 50283S, complete sequence Length = 149398 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ctcttcctttctcttctcca 235 |||||||||||||||||||| Sbjct: 56122 ctcttcctttctcttctcca 56141
>gb|AC115784.9| Mus musculus chromosome 15, clone RP23-170J10, complete sequence Length = 212803 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gctcttcctttctcttctcc 234 |||||||||||||||||||| Sbjct: 149388 gctcttcctttctcttctcc 149407
>gb|AC147679.13| Canis Familiaris, clone XX-10F3, complete sequence Length = 193944 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atataaataaataaattcca 92 |||||||||||||||||||| Sbjct: 135886 atataaataaataaattcca 135905
>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete sequence Length = 200350 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 125977 ttttgttttgtttcctttct 125958
>gb|AC104718.1| Sus scrofa clone RP44-254M15, complete sequence Length = 54814 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 36987 ggttttgttttgtttccttt 37006
>gb|AC147046.3| Pan troglodytes BAC clone RP43-125P11 from 7, complete sequence Length = 134708 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 cttgacaaaatccaaaatcc 476 |||||||||||||||||||| Sbjct: 109150 cttgacaaaatccaaaatcc 109169
>ref|NM_001040400.1| Mus musculus RIKEN cDNA E130014J05 gene (E130014J05Rik), mRNA Length = 9018 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 7037 ggttttgttttgtttccttt 7056
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence Length = 218698 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 atgaggttttgttttgtttc 139 |||||||||||||||||||| Sbjct: 133432 atgaggttttgttttgtttc 133451
>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence Length = 174823 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcagccttgtcagccttgat 291 |||||||||||||||||||| Sbjct: 91704 tcagccttgtcagccttgat 91723
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 13796 gatgaggttttgttttgttt 13815
>gb|AC165279.3| Mus musculus chromosome 15, clone RP23-259J10, complete sequence Length = 176055 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 atacttgacaaaatccaaaa 473 |||||||||||||||||||| Sbjct: 87896 atacttgacaaaatccaaaa 87915
>gb|AC137742.3| Mus musculus BAC clone RP24-345F6 from chromosome 16, complete sequence Length = 170248 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 atcttgaagaagtccattgtcctg 324 |||||||||||||||||| ||||| Sbjct: 36193 atcttgaagaagtccattatcctg 36170
>gb|AY518540.1| Homo sapiens CDC5 cell division cycle 5-like (S. pombe) (CDC5L) gene, complete cds Length = 63393 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 25484 ttttgttttgtttcctttct 25503
>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence Length = 195767 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aggttttgttttgtttcctt 142 |||||||||||||||||||| Sbjct: 157322 aggttttgttttgtttcctt 157341
>gb|AC140982.2| Mus musculus BAC clone RP23-171L7 from chromosome 16, complete sequence Length = 208232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tttgttttgtttcctttctc 146 |||||||||||||||||||| Sbjct: 104182 tttgttttgtttcctttctc 104201
>gb|AC125324.4| Mus musculus BAC clone RP23-284J23 from chromosome 1, complete sequence Length = 168982 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 105257 ttttgttttgtttcctttct 105276
>emb|BX936329.9| Zebrafish DNA sequence from clone CH211-1F1 in linkage group 3, complete sequence Length = 76179 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atataaataaataaattcca 92 |||||||||||||||||||| Sbjct: 1157 atataaataaataaattcca 1176
>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence Length = 186858 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttc 144 |||||||||||||||||||| Sbjct: 101006 gttttgttttgtttcctttc 101025
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 195326 acagatataaataaataaat 195345
>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence Length = 202652 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tgatgttgaagatatcttga 307 |||||||||||||||||||| Sbjct: 8186 tgatgttgaagatatcttga 8167
>gb|AC122477.5| Mus musculus BAC clone RP24-336L24 from chromosome 14, complete sequence Length = 158605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ataaataaataaattccagc 94 |||||||||||||||||||| Sbjct: 2510 ataaataaataaattccagc 2491
>gb|AC121806.3| Mus musculus BAC clone RP23-448L10 from chromosome 7, complete sequence Length = 182011 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 agctcttcctttctcttctc 233 |||||||||||||||||||| Sbjct: 88132 agctcttcctttctcttctc 88113
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 30446 gatgaggttttgttttgttt 30427
>gb|AC125037.4| Mus musculus BAC clone RP23-332H20 from chromosome 3, complete sequence Length = 207842 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 72563 ttttgttttgtttcctttct 72544
>emb|CR974441.3| Mouse DNA sequence from clone RP23-271P7 on chromosome X, complete sequence Length = 199381 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 107034 ttttgttttgtttcctttct 107053
>gb|AC122260.3| Mus musculus BAC clone RP23-185M15 from 6, complete sequence Length = 203877 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tttgttttgtttcctttctc 146 |||||||||||||||||||| Sbjct: 53834 tttgttttgtttcctttctc 53853
>gb|AC129541.15| Mus musculus chromosome 15, clone RP23-248M12, complete sequence Length = 197803 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 atacttgacaaaatccaaaa 473 |||||||||||||||||||| Sbjct: 28896 atacttgacaaaatccaaaa 28915
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 108884 ggttttgttttgtttccttt 108865
>gb|AF462604.1| Mus musculus HMG-L6 (Hmgl6), T2R6 (T2r6), and candidate taste receptor T2R4 (T2r4) genes, complete cds Length = 84503 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 83094 gatgaggttttgttttgttt 83075
>gb|AC135465.23| Medicago truncatula clone mth2-24h22, complete sequence Length = 109043 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 atcttgaagaagtccattgtcctg 324 |||||||||||| ||||||||||| Sbjct: 95912 atcttgaagaaggccattgtcctg 95935
>gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome 14, complete sequence Length = 215551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ataaataaataaattccagc 94 |||||||||||||||||||| Sbjct: 113086 ataaataaataaattccagc 113105
>gb|AC164971.2| Mus musculus BAC clone RP23-441D19 from chromosome 9, complete sequence Length = 213482 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atataaataaataaattcca 92 |||||||||||||||||||| Sbjct: 132525 atataaataaataaattcca 132544
>emb|BX324174.5| Mouse DNA sequence from clone RP23-110D11 on chromosome X, complete sequence Length = 215075 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 56078 ttttgttttgtttcctttct 56097
>emb|AL513282.10| Human DNA sequence from clone RP11-179G5 on chromosome 1 Contains a laminin receptor 1 (ribosomal protein SA, 67 kDa) (LAMR1) pseudogene the PXF gene for peroxisomal farnesylated protein and the 3' end of the COPA gene for coatomer protein complex subunit alpha, complete sequence Length = 76737 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 agatataaataaataaattc 90 |||||||||||||||||||| Sbjct: 37545 agatataaataaataaattc 37564
>emb|AL353588.25| Human DNA sequence from clone RP11-444E17 on chromosome 6 Contains the gene for a novel protein (possible ortholog of mouse TCTE1), the gene for novel protein (KIAA1270), a novel gene, the 5' end of a novel gene (possible ortholog of rodent CDC5-like protein), the 3' part of a novel gene and three CpG islands, complete sequence Length = 145947 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 134464 ttttgttttgtttcctttct 134483
>gb|AC103686.4| Homo sapiens chromosome 8, clone CTD-2655I2, complete sequence Length = 176584 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 100439 ggttttgttttgtttccttt 100420
>emb|AL136358.13| Human DNA sequence from clone RP11-183L8 on chromosome 13 Contains the 5' end of the LHFP gene for lipoma HMGIC fusion partner and a CpG island, complete sequence Length = 120507 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 atgaggttttgttttgtttccttt 143 ||||||||||||||||||| |||| Sbjct: 92424 atgaggttttgttttgttttcttt 92401
>gb|AY316117.1| Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC) gene, complete cds Length = 187059 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 103445 ggttttgttttgtttccttt 103464
>emb|Z98056.2|SPAC5D6 S.pombe chromosome I cosmid c5D6 Length = 21852 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 4059 ttttgttttgtttcctttct 4040
>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete sequence Length = 218059 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tgatgttgaagatatcttga 307 |||||||||||||||||||| Sbjct: 174625 tgatgttgaagatatcttga 174606
>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence Length = 181828 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 96318 ggttttgttttgtttccttt 96299
>emb|AL049660.1|ATF15B8 Arabidopsis thaliana DNA chromosome 3, BAC clone F15B8 Length = 94378 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 atataaataaataaattcca 92 |||||||||||||||||||| Sbjct: 40455 atataaataaataaattcca 40436
>emb|AL023518.2|SPCC1020 S.pombe chromosome III cosmid c1020 Length = 42460 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atataaataaataaattcca 92 |||||||||||||||||||| Sbjct: 8920 atataaataaataaattcca 8939
>emb|AJ556169.1|ACA556169 Aplysia californica mRNA for hemocyanin (hc gene) Length = 11468 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tcttcctttctcttctccag 236 |||||||||||||||||||| Sbjct: 8554 tcttcctttctcttctccag 8535
>emb|AJ240053.1|STU240053 Solanum tuberosum mRNA for plastidic phosphoglucomutase Length = 2489 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 568 cttggctttcaatgcttgcatatc 591 ||||||||||||| |||||||||| Sbjct: 1518 cttggctttcaatacttgcatatc 1541
>emb|CR938728.5| Mouse DNA sequence from clone RP23-352D3 on chromosome X, complete sequence Length = 193559 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 70113 ttttgttttgtttcctttct 70094
>emb|CR938726.3| Mouse DNA sequence from clone RP23-28J9 on chromosome X, complete sequence Length = 239405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 193455 ttttgttttgtttcctttct 193436
>gb|AC108508.2| Genomic sequence for Mus musculus, clone RP23-437O14, complete sequence Length = 196162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gaggttttgttttgtttcct 141 |||||||||||||||||||| Sbjct: 156656 gaggttttgttttgtttcct 156675
>emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on chromosome 11 Contains the genes for olfactory receptors MOR135-7, -8, -10 and -28, three olfactory receptor MOR135 pseudogenes, and the gene for olfactory receptor MOR157-1, complete sequence Length = 199115 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cagatataaataaataaatt 89 |||||||||||||||||||| Sbjct: 29045 cagatataaataaataaatt 29026
>emb|CR555303.7| Mouse DNA sequence from clone RP24-322L1 on chromosome X, complete sequence Length = 135280 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 57325 ttttgttttgtttcctttct 57344
>emb|CR589930.7| Mouse DNA sequence from clone RP23-224F19 on chromosome X, complete sequence Length = 79313 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 49132 ttttgttttgtttcctttct 49113
>gb|AC087350.3| Homo sapiens chromosome 8, clone RP11-367C15, complete sequence Length = 193364 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 gtgattcttcagggcactcaccat 455 |||| ||||||||||||||||||| Sbjct: 156358 gtgagtcttcagggcactcaccat 156335
>emb|BX510316.11| Zebrafish DNA sequence from clone CH211-194J3 in linkage group 12, complete sequence Length = 189720 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 2893 acagatataaataaataaat 2874
>emb|AJ621744.1| Gallus gallus gene for hypothetical protein, BAC bCHORI92M14 clone, contig 5 Length = 68491 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctcttcctttctcttctcc 234 |||||||||||||||||||| Sbjct: 10855 gctcttcctttctcttctcc 10836
>gb|DQ079067.1| Mus musculus Ayu17-449 mRNA, complete cds Length = 9018 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 7037 ggttttgttttgtttccttt 7056
>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1, complete sequence Length = 216540 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 162442 acagatataaataaataaat 162423
>emb|CR556703.5| Mouse DNA sequence from clone RP23-113H12 on chromosome X, complete sequence Length = 215182 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 202257 ttttgttttgtttcctttct 202276
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence Length = 221749 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agacaacaagtcaggaagga 32 |||||||||||||||||||| Sbjct: 181603 agacaacaagtcaggaagga 181584
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 ccagctatcttggctttcaa 579 |||||||||||||||||||| Sbjct: 43656 ccagctatcttggctttcaa 43637
>gb|AC099329.2| Homo sapiens chromosome 3 clone RP11-70C1, complete sequence Length = 167667 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 98627 acagatataaataaataaat 98646
>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence Length = 180202 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 51699 acagatataaataaataaat 51718
>dbj|AK146995.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920083P19 product:interferon gamma receptor 2, full insert sequence Length = 3248 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tgatgttgaagatatcttga 307 |||||||||||||||||||| Sbjct: 3135 tgatgttgaagatatcttga 3116
>dbj|AK141099.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230051N11 product:hypothetical protein, full insert sequence Length = 2323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttc 144 |||||||||||||||||||| Sbjct: 1738 gttttgttttgtttcctttc 1719
>gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, complete sequence Length = 202847 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ttgtttacacagatataaataaataaat 88 ||||||||||||||| |||||| ||||| Sbjct: 28795 ttgtttacacagataaaaataagtaaat 28822
>gb|AC098969.2| Homo sapiens chromosome 3 clone RP11-24O17, complete sequence Length = 158560 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctttctcttctccagat 238 |||||||||||||||||||| Sbjct: 69037 ttcctttctcttctccagat 69056
>gb|AC087456.3| Homo sapiens chromosome 15, clone RP11-26A13, complete sequence Length = 170945 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 19065 acagatataaataaataaat 19046
>gb|AC091948.3| Homo sapiens chromosome 5 clone RP11-373N22, complete sequence Length = 172162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 132731 gatgaggttttgttttgttt 132750
>gb|DQ311677.1| Plasmodium vivax strain VCG-I rhoptry-associated protein 1 (RAP1) mRNA, complete cds Length = 2235 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctcttcctttctcttctcc 234 |||||||||||||||||||| Sbjct: 670 gctcttcctttctcttctcc 651
>gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, complete sequence Length = 176140 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 25990 acagatataaataaataaat 26009
>gb|AC159338.10| Mus musculus 6 BAC RP24-540A24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173081 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tttgttttgtttcctttctc 146 |||||||||||||||||||| Sbjct: 125034 tttgttttgtttcctttctc 125015
>gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, complete sequence Length = 157000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tcagccttgtcagccttgat 291 |||||||||||||||||||| Sbjct: 30647 tcagccttgtcagccttgat 30628
>emb|BX294192.12| Mouse DNA sequence from clone RP23-98M14 on chromosome X, complete sequence Length = 211404 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 182562 ttttgttttgtttcctttct 182581
>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 137583 acagatataaataaataaat 137564
>gb|AC159236.2| Mus musculus BAC clone RP24-447C11 from chromosome 13, complete sequence Length = 160424 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 3523 ggttttgttttgtttccttt 3542
>gb|AC118192.13| Mus musculus chromosome 1, clone RP23-200C17, complete sequence Length = 187935 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 39691 acagatataaataaataaat 39672
>ref|NM_001018791.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC5D6.10c), partial mRNA Length = 408 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 273 ttttgttttgtttcctttct 254
>dbj|AK053408.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130014J05 product:unclassifiable, full insert sequence Length = 1868 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 413 ggttttgttttgtttccttt 432
>emb|BX322626.9| Mouse DNA sequence from clone RP23-269P17 on chromosome X, complete sequence Length = 146807 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 12983 ttttgttttgtttcctttct 12964
>emb|BX465214.7| Mouse DNA sequence from clone RP24-89M24 on chromosome X, complete sequence Length = 251075 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 33062 ttttgttttgtttcctttct 33043
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctcttcctttctcttctcca 235 |||||||||||||||||||| Sbjct: 14680162 ctcttcctttctcttctcca 14680143
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctcttcctttctcttctcca 235 |||||||||||||||||||| Sbjct: 15530101 ctcttcctttctcttctcca 15530082
>gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complete sequence Length = 175644 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 acacagatataaataaataa 86 |||||||||||||||||||| Sbjct: 98721 acacagatataaataaataa 98702
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone BACR11D12, complete sequence Length = 189596 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acaagtcaggaaggagcaag 37 |||||||||||||||||||| Sbjct: 161694 acaagtcaggaaggagcaag 161675
>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence Length = 217045 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gctcttcctttctcttctcc 234 |||||||||||||||||||| Sbjct: 23355 gctcttcctttctcttctcc 23374
>gb|AC140204.3| Mus musculus BAC clone RP24-342N5 from chromosome 6, complete sequence Length = 200130 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 84220 gatgaggttttgttttgttt 84239
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 62538 ttttgttttgtttcctttct 62519
>gb|U82696.2| Homo sapiens chromosome X clone ICRFXc104-F064, ICRFXc104-G0799, Qc-14E2, Qc-13D8, Qc-7G11, ICRFXc104-E0681, Qc-11C8, Qc-9A9 map q28, complete sequence Length = 161664 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 112945 gatgaggttttgttttgttt 112926
>gb|AF274856.3| Homo sapiens chromosome X clone RP11-1007I13 map q28, complete sequence Length = 173962 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 14589 gatgaggttttgttttgttt 14570
>gb|AF274855.3| Homo sapiens chromosome X clone RP11-366F6 map q28, complete sequence Length = 200395 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 169099 gatgaggttttgttttgttt 169080
>emb|BX890588.3| Mouse DNA sequence from clone RP23-88C4 on chromosome X, complete sequence Length = 239548 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 214947 ttttgttttgtttcctttct 214928
>gb|AF248484.1|AF248484 Homo sapiens chromosome 21 PAC 30P13 map 21q11.2, complete sequence, containing gene for nuclear factor RIP140 Length = 148131 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 113250 ggttttgttttgtttccttt 113231
>emb|BX842675.2| Mouse DNA sequence from clone RP24-406D18 on chromosome X, complete sequence Length = 183602 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ttttgttttgtttcctttct 145 |||||||||||||||||||| Sbjct: 104535 ttttgttttgtttcctttct 104516
>gb|AC007385.3| Homo sapiens BAC clone RP11-325M10 from 2, complete sequence Length = 188062 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 acacagatataaataaataa 86 |||||||||||||||||||| Sbjct: 183470 acacagatataaataaataa 183489
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctcttcctttctcttctcca 235 |||||||||||||||||||| Sbjct: 87610 ctcttcctttctcttctcca 87591
>emb|AL935114.8| Zebrafish DNA sequence from clone CH211-182P11, complete sequence Length = 152177 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 83140 acagatataaataaataaat 83159
>dbj|AK129389.1| Mus musculus mRNA for mKIAA1546 protein Length = 6365 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 4225 ggttttgttttgtttccttt 4244
>emb|CR388008.5| Zebrafish DNA sequence from clone CH211-206K3 in linkage group 10, complete sequence Length = 67031 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 gttttgttttgtttcctttctcgttact 152 |||||||||||||| ||| ||||||||| Sbjct: 27234 gttttgttttgtttgcttgctcgttact 27207
>gb|AC154104.2| Mus musculus BAC clone RP24-555C7 from 7, complete sequence Length = 191855 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 agctcttcctttctcttctc 233 |||||||||||||||||||| Sbjct: 169772 agctcttcctttctcttctc 169791
>emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in linkage group 10, complete sequence Length = 197451 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ataaataaataaattccagc 94 |||||||||||||||||||| Sbjct: 31261 ataaataaataaattccagc 31242
>gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84_E_24, complete sequence Length = 180385 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gatgaggttttgttttgttt 138 |||||||||||||||||||| Sbjct: 2369 gatgaggttttgttttgttt 2388
>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete sequence Length = 267607 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acaagtcaggaaggagcaag 37 |||||||||||||||||||| Sbjct: 238233 acaagtcaggaaggagcaag 238214
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctcttcctttctcttctcca 235 |||||||||||||||||||| Sbjct: 14760595 ctcttcctttctcttctcca 14760576
>gb|AY494079.1| Fucus vesiculosus mitochondrion, complete genome Length = 36392 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gagcaagctctaaggacatt 50 |||||||||||||||||||| Sbjct: 9685 gagcaagctctaaggacatt 9666
>emb|CT025521.10| Mouse DNA sequence from clone RP23-337J16 on chromosome 16, complete sequence Length = 200017 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 agctcttcctttctcttctc 233 |||||||||||||||||||| Sbjct: 149544 agctcttcctttctcttctc 149563
>gb|AC125345.4| Mus musculus BAC clone RP24-346N18 from 6, complete sequence Length = 152279 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 atatcttgaagaagtccatt 318 |||||||||||||||||||| Sbjct: 1718 atatcttgaagaagtccatt 1699
>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence Length = 211504 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 atatcttgaagaagtccatt 318 |||||||||||||||||||| Sbjct: 2388 atatcttgaagaagtccatt 2407
>emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chromosome 13, complete sequence Length = 195169 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 171915 ggttttgttttgtttccttt 171934
>emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chromosome 4, complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gttttgttttgtttcctttc 144 |||||||||||||||||||| Sbjct: 52408 gttttgttttgtttcctttc 52427
>gb|AC102227.17| Mus musculus chromosome 1, clone RP24-62C22, complete sequence Length = 201757 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 71819 acagatataaataaataaat 71838
>gb|L27425.1|HUMDNAAPK Homo sapiens DNA-activated protein kinase catalytic subunit gene, partial cds Length = 7902 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 7871 ggttttgttttgtttccttt 7890
>emb|AL773585.7| Mouse DNA sequence from clone RP23-16D18 on chromosome 2, complete sequence Length = 207100 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggttttgttttgtttccttt 143 |||||||||||||||||||| Sbjct: 167670 ggttttgttttgtttccttt 167651
>gb|AC163389.2| Mus musculus chromosome 1, clone RP23-397E23, complete sequence Length = 203933 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 69080 acagatataaataaataaat 69099
>dbj|AB055501.1| Nicotiana tabacum NtPPGM mRNA for plastidic phosphoglucomutase, partial cds Length = 500 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 568 cttggctttcaatgcttgcatatc 591 ||||||||||||| |||||||||| Sbjct: 437 cttggctttcaatacttgcatatc 460
>emb|AL645466.12| Mouse DNA sequence from clone RP23-162P18 on chromosome X, complete sequence Length = 141324 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acagatataaataaataaat 88 |||||||||||||||||||| Sbjct: 8034 acagatataaataaataaat 8015
>emb|AL731654.7| Mouse DNA sequence from clone RP23-376I2 on chromosome 4, complete sequence Length = 49798 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gaggttttgttttgtttcct 141 |||||||||||||||||||| Sbjct: 37889 gaggttttgttttgtttcct 37908 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,030,509 Number of Sequences: 3902068 Number of extensions: 10030509 Number of successful extensions: 1193663 Number of sequences better than 10.0: 191 Number of HSP's better than 10.0 without gapping: 191 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1189800 Number of HSP's gapped (non-prelim): 3863 length of query: 604 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 581 effective length of database: 17,143,297,704 effective search space: 9960255966024 effective search space used: 9960255966024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
