| Clone Name | rbaal29p03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds Length = 819 Score = 920 bits (464), Expect = 0.0 Identities = 586/624 (93%), Gaps = 7/624 (1%) Strand = Plus / Minus Query: 2 aattttgattttttgagtacatgatccaa-taacaaagagctcaagcaagcggttgcata 60 ||||||||||||| | |||||||||||| |||||| ||| ||||||||| || ||| | Sbjct: 718 aattttgatttttcaaatacatgatccaagtaacaacgagatcaagcaag--gtcgcaaa 661 Query: 61 ttcaatacatgaacaagagagccagccaatatgcaaatcaagaaggatcttcaagcagtt 120 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 660 ttcaatacatgaacaagag----ggccaatatgcaaatcaagatggatcttcaagcagtt 605 Query: 121 tcagcaacggggtactcgtataccacatccttgccacaaagcctgcggtacactgaagtg 180 || ||||| || ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 604 tcggcaaccggatactcatacaccacatctttgccacaaagcctgcggtacactgcagtg 545 Query: 181 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 544 aaggtatccaacttgtactctgtgttgttgcgttccattgggtccaagaagatcttaatg 485 Query: 241 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 300 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 484 atcttcgagccatctagacgatatctgacacgtttccccacaatctcagctgggtacaca 425 Query: 301 acatcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaaca 360 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 424 acatcctccaaaaggccatcatgaacagcagtcaaagttctggtacgagggcgaacaaca 365 Query: 361 gcagaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttg 420 |||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 364 gcagaacccttcttgggtggcctcacaatccgccttgtagcaacaataacaacgtccttg 305 Query: 421 ccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaaggacttg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 304 ccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagttcttg 245 Query: 481 cggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatccatctgg 540 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 cggagcctatacggcacgtggatgaccacggccttcctgttccctgcaacatccatctgg 185 Query: 541 aaggcggcgttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctcc 600 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 184 aaggcggcgttgatgtagaggtctttaacgtcgctcttgagctcctggttgccattctcc 125 Query: 601 aggtcgaagaaagcctgcgcgacg 624 |||||||||||||||||||||||| Sbjct: 124 aggtcgaagaaagcctgcgcgacg 101
>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds Length = 600 Score = 458 bits (231), Expect = e-125 Identities = 408/467 (87%) Strand = Plus / Minus Query: 154 ccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgt 213 ||||||||||||||||| |||| || |||||| |||| ||||||||| ||||||||||| Sbjct: 553 ccacaaagcctgcggtagactgcagagaaggtctccagcttgtactcagtgttgttgcgc 494 Query: 214 tcctttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgt 273 ||||| ||||||||| |||||||||||| || | ||||| | ||| || |||||||| Sbjct: 493 tccttcgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacacgc 434 Query: 274 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 333 ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||| Sbjct: 433 ttccccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtc 374 Query: 334 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 393 | || || || |||||||| |||||||||||| || |||||||||||||| |||| Sbjct: 373 agggtcctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacgatcctt 314 Query: 394 cttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagc 453 ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 313 cttgttgcaacaaagacaacatccttgccgctaaacttcttctcgagctccctgacgagc 254 Query: 454 ctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggcc 513 ||||| |||||||||||||||| |||||| || | ||| || || ||||| ||||||||| Sbjct: 253 ctgacatggatcttcctgaagggcttgcgcagacggtatggcacatggatcaccacggcc 194 Query: 514 ttcctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtctttgacgtcg 573 ||||||||||| ||||||||||||||| || | ||||||||| ||||| |||| |||| Sbjct: 193 ttcctgttcccaacaacatccatctggattgcagtgttgatgtacaggtccttgaggtcg 134 Query: 574 ctcttgagctcctggttgccattctccaggtcgaagaaagcctgcgc 620 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133 ctcttgagctcctggttgccattctccaggtcaaagaaagcctgcgc 87
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene) Length = 852 Score = 446 bits (225), Expect = e-122 Identities = 409/468 (87%), Gaps = 3/468 (0%) Strand = Plus / Minus Query: 157 caaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcc 216 |||||||||||||| |||| || |||||| |||| |||||| || ||||||||||| ||| Sbjct: 596 caaagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcc 537 Query: 217 tttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttc 276 |||||||||||| |||||||||||| || | ||||| | ||| || ||||| || ||| Sbjct: 536 tttgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttc 477 Query: 277 cccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaa 336 |||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 476 cccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtcagg 417 Query: 337 gttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgcctt 396 ||||| || |||||||| |||||||||||| || ||||||||||||||||||| ||| Sbjct: 416 gttctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacaatccttctt 357 Query: 397 gttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 456 |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct: 356 gttgcaacaaagacaacatccttgccgct-aactc--tctcgagctccctgacgagcctg 300 Query: 457 acgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttc 516 || |||||||||||||||| ||||||||| | |||||| || ||||| |||||||||||| Sbjct: 299 acatggatcttcctgaagggcttgcggagacggtacggcacatggatcaccacggccttc 240 Query: 517 ctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtctttgacgtcgctc 576 |||||||| ||||||||||||||| || | ||||||||| ||||| |||| ||||||| Sbjct: 239 ctgttcccaacaacatccatctggatcgcagtgttgatgtacaggtccttgaggtcgctc 180 Query: 577 ttgagctcctggttgccattctccaggtcgaagaaagcctgcgcgacg 624 ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 179 ttgagctcctggttgccattctccaggtcaaagaaagcctgcgcgacg 132
>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence Length = 907 Score = 412 bits (208), Expect = e-112 Identities = 409/476 (85%) Strand = Plus / Minus Query: 142 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 201 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 653 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 594 Query: 202 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 261 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 593 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 534 Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 321 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 533 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 474 Query: 322 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 381 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 473 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 414 Query: 382 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 441 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 413 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 354 Query: 442 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 501 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 353 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 294 Query: 502 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 561 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 293 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 234 Query: 562 tctttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaaagcctg 617 || |||| ||||||||||||||||||||| || |||||||| || ||||||||||| Sbjct: 233 tccttgaggtcgctcttgagctcctggttcccgttctccagatcaaagaaagcctg 178
>gb|AY103554.1| Zea mays PCO154340 mRNA sequence Length = 1075 Score = 412 bits (208), Expect = e-112 Identities = 409/476 (85%) Strand = Plus / Minus Query: 142 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 201 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 692 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 633 Query: 202 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 261 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 632 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 573 Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 321 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 572 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 513 Query: 322 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 381 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 512 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 453 Query: 382 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 441 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 452 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 393 Query: 442 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 501 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 392 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 333 Query: 502 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 561 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 332 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 273 Query: 562 tctttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaaagcctg 617 || |||| ||||||||||||||||||||| || |||||||| || ||||||||||| Sbjct: 272 tccttgaggtcgctcttgagctcctggttcccgttctccagatcaaagaaagcctg 217
>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full insert sequence Length = 966 Score = 392 bits (198), Expect = e-106 Identities = 438/518 (84%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 655 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 596 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 595 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 536 Query: 227 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 286 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 535 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 476 Query: 287 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 346 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 475 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 416 Query: 347 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 406 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 415 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 356 Query: 407 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 466 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 355 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 296 Query: 467 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 526 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 295 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 236 Query: 527 caacatccatctggaaggcggcgttgatgtagaggtctttgacgtcgctcttgagctcct 586 ||| ||||||||||| || ||||||||| ||||| |||| |||||||||||||||| Sbjct: 235 caatatccatctggactgcattgttgatgtacaggtccttgagctcgctcttgagctcct 176 Query: 587 ggttgccattctccaggtcgaagaaagcctgcgcgacg 624 ||||||||||||| ||||| |||||||||||||||||| Sbjct: 175 ggttgccattctcgaggtcaaagaaagcctgcgcgacg 138
>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full insert sequence Length = 830 Score = 392 bits (198), Expect = e-106 Identities = 438/518 (84%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 654 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 595 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 594 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 535 Query: 227 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 286 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 534 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 475 Query: 287 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 346 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 474 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 415 Query: 347 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 406 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 414 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 355 Query: 407 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 466 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 354 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 295 Query: 467 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 526 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 294 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 235 Query: 527 caacatccatctggaaggcggcgttgatgtagaggtctttgacgtcgctcttgagctcct 586 ||| ||||||||||| || ||||||||| ||||| |||| |||||||||||||||| Sbjct: 234 caatatccatctggactgcattgttgatgtacaggtccttgagctcgctcttgagctcct 175 Query: 587 ggttgccattctccaggtcgaagaaagcctgcgcgacg 624 ||||||||||||| ||||| |||||||||||||||||| Sbjct: 174 ggttgccattctcgaggtcaaagaaagcctgcgcgacg 137
>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence Length = 840 Score = 270 bits (136), Expect = 5e-69 Identities = 391/476 (82%) Strand = Plus / Minus Query: 142 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 201 |||||||| || ||||| ||||||||||| || | | || ||| |||| |||||| || Sbjct: 616 accacatctttcccacacagcctgcggtagaccgcaatgcagggctccagcttgtattca 557 Query: 202 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 261 | |||||| | ||||||||||||||||| |||||||| || || || ||||| | ||| Sbjct: 556 gagttgttcctctcctttgggtccaagaaaatcttgataatcttggacccatccacacgg 497 Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 321 ||| ||||| | |||||| ||||||||| |||||| |||||||||||||||| ||||| Sbjct: 496 tatgtgacatgcttcccctcaatctcagttgggtagacaacatcctccaaaatgccatcg 437 Query: 322 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 381 ||||||||||||| ||| || || | |||||| | |||||| || || || |||||| | Sbjct: 436 tgaacagcagtcacagtcctggtcctagggcgcagaacagctgaccccttcgtgggtgcc 377 Query: 382 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 441 |||||||||| |||||| |||||||| || || ||||| ||| |||| |||||||| ||| Sbjct: 376 ctcacaatcccccttgtagcaacaattaccacatccttcccgatgaatttcttctccagc 317 Query: 442 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 501 ||||||| ||| ||||| ||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 316 tccctgaagagtctgacatggatcttcctgaagcccttgcgcagacggtatgggacgtgg 257 Query: 502 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 561 ||||| | |||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 256 atgacatcacccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 197 Query: 562 tctttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaaagcctg 617 || |||| ||||||||||| ||||||||| || |||||||| || ||||||||||| Sbjct: 196 tccttgaggtcgctcttgacctcctggttcccgttctccagatcaaagaaagcctg 141
>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full insert sequence Length = 811 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 415 tccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaag 474 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| Sbjct: 357 tccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaat 298 Query: 475 gacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcc 534 | |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| |||| Sbjct: 297 gccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcc 238 Query: 535 atctggaaggcggcgttgatgtagaggtctttgacgtcgctcttgagctcctggttgcca 594 ||||||| || ||||||||| ||||| |||| |||||||||||||||||||||||| Sbjct: 237 atctggactgcattgttgatgtacaggtccttgagctcgctcttgagctcctggttgcca 178 Query: 595 ttctccaggtcgaagaaagcctgcgcgacg 624 ||||| ||||| |||||||||||||||||| Sbjct: 177 ttctcgaggtcaaagaaagcctgcgcgacg 148 Score = 113 bits (57), Expect = 7e-22 Identities = 168/205 (81%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 577 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 518 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 517 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 458 Query: 227 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 286 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 457 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 398 Query: 287 cagctgggtaaacaacatcctccaa 311 |||||||||| || ||||| ||||| Sbjct: 397 cagctgggtagactacatcttccaa 373
>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7) mRNA, complete cds Length = 919 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 600 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 541 Query: 252 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 311 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 540 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 481 Query: 312 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 371 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 480 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 421 Query: 372 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 431 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 420 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 361 Query: 432 cttctcgagctccctgacgagcctgacgtggatcttc 468 |||||| || ||||| || ||||| || ||||||||| Sbjct: 360 cttctcaagttccctaacaagcctcacatggatcttc 324
>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full insert sequence Length = 910 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 252 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 311 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 312 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 371 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 372 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 431 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 432 cttctcgagctccctgacgagcctgacgtggatcttc 468 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full insert sequence Length = 910 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 252 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 311 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 312 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 371 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 372 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 431 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 432 cttctcgagctccctgacgagcctgacgtggatcttc 468 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full insert sequence Length = 903 Score = 145 bits (73), Expect = 2e-31 Identities = 226/277 (81%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 252 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 311 | | | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 acccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 312 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 371 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 372 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 431 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 432 cttctcgagctccctgacgagcctgacgtggatcttc 468 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10366335 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10366276 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10366275 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10366216 Query: 536 tctgg 540 ||||| Sbjct: 10366215 tctgg 10366211 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10367112 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10367053 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10367052 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10366993 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10366992 ttcttgggaggcctcacaatcctccttgttgcaacaat 10366955 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10370579 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10370520 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10370519 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10370460 Query: 536 tctgg 540 ||||| Sbjct: 10370459 tctgg 10370455 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10371367 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10371308 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10371307 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10371248 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10371247 ttcttgggaggcctcacaatcctccttgttgcaacaat 10371210 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 10370316 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 10370257 Query: 609 gaaagcct 616 |||||||| Sbjct: 10370256 gaaagcct 10370249 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 10366076 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 10366017 Query: 609 gaaagcct 616 |||||||| Sbjct: 10366016 gaaagcct 10366009 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10371759 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10371700 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10371699 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10371640 Query: 227 agaagatct 235 |||| |||| Sbjct: 10371639 agaaaatct 10371631 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10367503 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10367444 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10367443 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10367384 Query: 227 agaagatct 235 |||| |||| Sbjct: 10367383 agaaaatct 10367375
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 22888 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 22829 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 22828 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 22769 Query: 536 tctgg 540 ||||| Sbjct: 22768 tctgg 22764 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 23665 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 23606 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 23605 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 23546 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 23545 ttcttgggaggcctcacaatcctccttgttgcaacaat 23508 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 27132 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 27073 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 27072 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 27013 Query: 536 tctgg 540 ||||| Sbjct: 27012 tctgg 27008 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 27920 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 27861 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 27860 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 27801 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 27800 ttcttgggaggcctcacaatcctccttgttgcaacaat 27763 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 26869 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 26810 Query: 609 gaaagcct 616 |||||||| Sbjct: 26809 gaaagcct 26802 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 22629 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 22570 Query: 609 gaaagcct 616 |||||||| Sbjct: 22569 gaaagcct 22562 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 28312 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 28253 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 28252 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 28193 Query: 227 agaagatct 235 |||| |||| Sbjct: 28192 agaaaatct 28184 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 24056 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 23997 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 23996 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 23937 Query: 227 agaagatct 235 |||| |||| Sbjct: 23936 agaaaatct 23928
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 79801 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 79742 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 79741 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 79682 Query: 536 tctgg 540 ||||| Sbjct: 79681 tctgg 79677 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 80578 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 80519 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 80518 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 80459 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 80458 ttcttgggaggcctcacaatcctccttgttgcaacaat 80421 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 84045 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 83986 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 83985 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 83926 Query: 536 tctgg 540 ||||| Sbjct: 83925 tctgg 83921 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 84833 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 84774 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 84773 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 84714 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 84713 ttcttgggaggcctcacaatcctccttgttgcaacaat 84676 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 83782 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 83723 Query: 609 gaaagcct 616 |||||||| Sbjct: 83722 gaaagcct 83715 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 79542 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 79483 Query: 609 gaaagcct 616 |||||||| Sbjct: 79482 gaaagcct 79475 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 85225 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 85166 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 85165 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 85106 Query: 227 agaagatct 235 |||| |||| Sbjct: 85105 agaaaatct 85097 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 80969 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 80910 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 80909 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 80850 Query: 227 agaagatct 235 |||| |||| Sbjct: 80849 agaaaatct 80841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10364436 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10364377 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10364376 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10364317 Query: 536 tctgg 540 ||||| Sbjct: 10364316 tctgg 10364312 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10365213 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10365154 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10365153 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10365094 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10365093 ttcttgggaggcctcacaatcctccttgttgcaacaat 10365056 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 475 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10368680 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10368621 Query: 476 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 535 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10368620 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10368561 Query: 536 tctgg 540 ||||| Sbjct: 10368560 tctgg 10368556 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 309 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10369468 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10369409 Query: 310 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 369 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10369408 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10369349 Query: 370 tttttgggtggcctcacaatccgccttgttgcaacaat 407 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10369348 ttcttgggaggcctcacaatcctccttgttgcaacaat 10369311 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 10368417 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 10368358 Query: 609 gaaagcct 616 |||||||| Sbjct: 10368357 gaaagcct 10368350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 10364177 gttgatgtacaggtccttgagctcgctcttgagctcctggttgccattctcgaggtcaaa 10364118 Query: 609 gaaagcct 616 |||||||| Sbjct: 10364117 gaaagcct 10364110 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10369860 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10369801 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10369800 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10369741 Query: 227 agaagatct 235 |||| |||| Sbjct: 10369740 agaaaatct 10369732 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 107 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 166 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10365604 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10365545 Query: 167 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 226 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10365544 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10365485 Query: 227 agaagatct 235 |||| |||| Sbjct: 10365484 agaaaatct 10365476
>ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 302 catcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacag 361 |||||||||| | ||||||||||||| | ||||||||||||||||||| || ||||| Sbjct: 235 catcctccaagattccatcatgaacagtaatcaaagttcttgtacgaggatgatgaacag 176 Query: 362 cagaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgc 421 | ||||| || ||| | ||||||||||||| |||||||||| ||| || || ||||||| Sbjct: 175 ctgaacccttattgagaggcctcacaatcctccttgttgcatcaaagaccacatccttgc 116 Query: 422 cgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 473 | |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 115 cactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 64
>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds Length = 392 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 105 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 164 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 177 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 118 Query: 165 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 224 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 117 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 58 Query: 225 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 279 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 57 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 3
>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence Length = 393 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 105 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 164 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 178 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 119 Query: 165 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 224 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 118 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 59 Query: 225 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 279 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 58 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 4
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 321 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 15621 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 15680 Query: 322 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 381 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 15681 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 15740 Query: 382 ctcac 386 ||||| Sbjct: 15741 ctcac 15745 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 235 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 14995 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 15038
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 321 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 119434 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 119493 Query: 322 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 381 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 119494 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 119553 Query: 382 ctcac 386 ||||| Sbjct: 119554 ctcac 119558 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 235 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 118808 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 118851
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 321 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 16168264 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 16168323 Query: 322 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 381 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 16168324 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 16168383 Query: 382 ctcac 386 ||||| Sbjct: 16168384 ctcac 16168388 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 235 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 16167638 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 16167681
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 274 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 333 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 13024659 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 13024717 Query: 334 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 393 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 13024718 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 13024777 Query: 394 cttgttgca 402 ||||||||| Sbjct: 13024778 cttgttgca 13024786 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 145 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 204 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 13024255 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 13024314 Query: 205 ttgttgcgttcctttgggtccaagaagatc 234 |||||||| |||||||| |||||||||||| Sbjct: 13024315 ttgttgcgctcctttggatccaagaagatc 13024344 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 473 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 13025424 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 13025481 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 552 gatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaa 611 |||||||| ||| |||| ||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 13025684 gatgtagatgtccttgagctcgctcttgagctaatggtttccattctcgaggtcaaagaa 13025743 Query: 612 a 612 | Sbjct: 13025744 a 13025744
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 274 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 333 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 134302 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 134360 Query: 334 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 393 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 134361 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 134420 Query: 394 cttgttgca 402 ||||||||| Sbjct: 134421 cttgttgca 134429 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 145 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 204 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 133898 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 133957 Query: 205 ttgttgcgttcctttgggtccaagaagatc 234 |||||||| |||||||| |||||||||||| Sbjct: 133958 ttgttgcgctcctttggatccaagaagatc 133987 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 473 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 135067 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 135124 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 552 gatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaa 611 |||||||| ||| |||| ||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 135327 gatgtagatgtccttgagctcgctcttgagctaatggtttccattctcgaggtcaaagaa 135386 Query: 612 a 612 | Sbjct: 135387 a 135387
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 274 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 333 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 1236 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 1294 Query: 334 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 393 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 1295 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 1354 Query: 394 cttgttgca 402 ||||||||| Sbjct: 1355 cttgttgca 1363 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 145 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 204 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 832 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 891 Query: 205 ttgttgcgttcctttgggtccaagaagatc 234 |||||||| |||||||| |||||||||||| Sbjct: 892 ttgttgcgctcctttggatccaagaagatc 921 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 473 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 2001 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 2058 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 552 gatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaagaa 611 |||||||| ||| |||| ||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 2261 gatgtagatgtccttgagctcgctcttgagctaatggtttccattctcgaggtcaaagaa 2320 Query: 612 a 612 | Sbjct: 2321 a 2321
>ref|NM_103777.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.1 mRNA, complete cds Length = 842 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 245 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 601 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 548
>ref|NM_179455.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.2 mRNA, complete cds Length = 837 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 245 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 541 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 488
>gb|BT009440.1| Triticum aestivum clone wlmk4.pk0019.f5:fis, full insert mRNA sequence Length = 1907 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 574 ctcttgagctcctggttgccattctccaggtcgaagaaagcc 615 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1636 ctcttgagctcctggttgccattctccaggtcaaagaaagcc 1595
>gb|AY072617.1| Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 576 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 245 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 498 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 445
>gb|AF412048.1|AF412048 Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 814 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 245 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 595 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 542
>gb|AY086866.1| Arabidopsis thaliana clone 28739 mRNA, complete sequence Length = 841 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 245 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 599 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 546 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 364 gaaccttttttgggtggcctcacaatccgccttgttgcaa 403 ||||| || ||||| ||||||||||||| |||||| |||| Sbjct: 427 gaacccttcttgggcggcctcacaatcctccttgtagcaa 388
>gb|DQ228355.1| Solanum tuberosum clone 153A08 ribosomal protein S7-like protein mRNA, complete cds Length = 881 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 181 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 240 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 602 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 543 Query: 241 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 300 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 542 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 483 Query: 301 acatcctccaaaagaccatcatgaacag 328 | ||||||||| | |||||||||||| Sbjct: 482 aaatcctccaatatggcatcatgaacag 455
>gb|DQ200382.1| Solanum tuberosum clone 063A09 unknown mRNA Length = 817 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 181 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 240 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 589 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 530 Query: 241 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 300 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 529 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 470 Query: 301 acatcctccaaaagaccatcatgaacag 328 | ||||||||| | |||||||||||| Sbjct: 469 aaatcctccaatatggcatcatgaacag 442
>gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BAC F11I4 genomic sequence, complete sequence Length = 80561 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 232 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 2112 cttgtactctgtgttgttcctttcctttgggtccaagaaga 2072
>gb|AC084242.4|AC084242 Arabidopsis thaliana chromosome 1 BAC T24P22 genomic sequence, complete sequence Length = 18062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 232 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 15801 cttgtactctgtgttgttcctttcctttgggtccaagaaga 15761
>gb|DQ191636.1| Solanum tuberosum 40S ribosomal protein S7-like protein mRNA, complete cds Length = 893 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 181 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 228 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 585 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 538
>ref|XM_784661.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S7 (S8) (LOC584812), mRNA Length = 667 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 417 cttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 468 ||||||||||||||||||||| ||||| | ||| |||||||| ||||||||| Sbjct: 290 cttgccgctgaacttcttctcaagctctcggactagcctgacctggatcttc 239
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 187 tccaacttgtactctgtgttgttgcgttcctttgggtccaagaa 230 |||| ||||||||| |||||||| |||||||||||||||||||| Sbjct: 14984 tccagcttgtactcagtgttgtttcgttcctttgggtccaagaa 14941 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgac 449 ||||||| || ||||||||||| ||||||||||| Sbjct: 14053 ccttgccactaaacttcttctcaagctccctgac 14020 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 250 ccatcaagacgatatctgacacgtttccccacaatctcagc 290 ||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 14772 ccatcaactcgatacctcacacgtttcccaacaatctcagc 14732 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgttcctttgggtccaagaa 230 |||||||||||||||||||| Sbjct: 43270 cgttcctttgggtccaagaa 43251 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcct 455 ||||||| || |||||||||| ||||||||||| ||||| Sbjct: 24439 ccttgccactaaacttcttcttaagctccctgactagcct 24400
>gb|DQ241830.1| Solanum tuberosum clone 174B09 40S ribosomal protein S7-like protein-like mRNA, complete cds Length = 894 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 181 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 228 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 592 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 545
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatctt 467 |||| |||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 45492 cctttccgctgaatttcttctcgagctccctaacaagcctgacatgaatctt 45441
>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA, partial cds Length = 546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 197 actctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaa 256 |||| ||||||||||| ||||| || ||||||||||||||| | ||||| || ||||||| Sbjct: 546 actcagtgttgttgcgctccttgggatccaagaagatcttgctaattttggacccatcaa 487
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccct 446 ||||||| ||||||||||||||||||||||| Sbjct: 125704 ccttgccactgaacttcttctcgagctccct 125674 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 549 gttgatgtagaggtctttgacgtcgctcttgagctcctggttgccattctccaggtcgaa 608 ||||||||| || ||||| | ||||| || | |||||||||| ||||||||| || || Sbjct: 125477 gttgatgtacagatctttcaaatcgcttttcaactcctggttggtattctccagatcaaa 125418 Query: 609 gaaagcctg 617 ||||||||| Sbjct: 125417 gaaagcctg 125409
>gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 308 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 408 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 456 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>gb|AF098519.1|AF098519 Avicennia marina unknown mRNA Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 262 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 308 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 408 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 456 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>ref|XM_716679.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_1700), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 318 atcatgaacagcagtcaaagttcttg 343 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>ref|XM_716558.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_9267), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 318 atcatgaacagcagtcaaagttcttg 343 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 416 ccttgccgctgaacttcttctcgagctccct 446 ||||||| |||||||||||||| |||||||| Sbjct: 142888 ccttgccactgaacttcttctccagctccct 142858
>emb|X94942.1|FRRPS7U17 F.rubripes rpS7 and snoRNA U17 genes Length = 4298 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 412 acgtccttgccgctgaacttcttctcgagctccct 446 |||| ||| ||||||||||||||||| |||||||| Sbjct: 2003 acgtgctttccgctgaacttcttctccagctccct 1969
>ref|NM_121618.2| Arabidopsis thaliana structural constituent of ribosome AT5G16130 mRNA, complete cds Length = 878 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 415 tccttgccgctgaacttcttctcgagctccctgacgag 452 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 252 atcaagacg 260 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AY940168.1| Cyanophage P-SSM4, complete genome Length = 178249 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 caagaagatcttgatgattttc 246 |||||||||||||||||||||| Sbjct: 153250 caagaagatcttgatgattttc 153271
>ref|XM_963054.1| PREDICTED: Tribolium castaneum similar to CG1883-PA, isoform A (LOC656528), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 408 aacaacgtccttgccgctgaacttcttctc 437 |||||||| |||||||||||||||||||| Sbjct: 307 aacaacgtgtttgccgctgaacttcttctc 278
>gb|AF402815.1| Ictalurus punctatus 40S ribosomal protein S7 mRNA, complete cds Length = 641 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 417 cttgccgctgaacttcttctcgagctccctgacgagcc 454 |||||| |||||||||||||| ||||||| ||||||| Sbjct: 292 cttgccactgaacttcttctccagctcccgcacgagcc 255
>gb|BT024914.1| Arabidopsis thaliana At5g16130 mRNA, complete cds Length = 573 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 415 tccttgccgctgaacttcttctcgagctccctgacgag 452 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 275 tcctttccactgaacttcttctcaagctctctgacgag 238 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 498 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 439 Query: 252 atcaagacg 260 ||||||||| Sbjct: 438 atcaagacg 430
>emb|BX832565.1|CNS09ZKS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 415 tccttgccgctgaacttcttctcgagctccctgacgag 452 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 330 tcctttccactgaacttcttctcaagctctctgacgag 293 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 553 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 494 Query: 252 atcaagacg 260 ||||||||| Sbjct: 493 atcaagacg 485
>gb|AY086292.1| Arabidopsis thaliana clone 23518 mRNA, complete sequence Length = 872 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 415 tccttgccgctgaacttcttctcgagctccctgacgag 452 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 252 atcaagacg 260 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 424 ctgaacttcttctcgagctccctgac 449 |||||||||||||||||||| ||||| Sbjct: 347 ctgaacttcttctcgagctctctgac 322 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 192 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 251 ||||||||| |||||||| | ||||| || ||||| | | ||| ||||| || | ||| Sbjct: 579 cttgtactcagtgttgttcctctccttaggctccaaatacaccttcatgatcttggtgcc 520 Query: 252 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 308 ||||| ||| |||||| ||| || || ||||||||||| |||||| | |||||||| Sbjct: 519 atcaacacggtatctggtacgctttccaacaatctcagcagggtaagcgacatcctc 463
>emb|AL731836.10| Mouse DNA sequence from clone RP23-119A13 on chromosome 2, complete sequence Length = 83802 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 510 ggccttcctgttccctgcaacatcca 535 |||||||||||| ||||||||||||| Sbjct: 58345 ggccttcctgtttcctgcaacatcca 58370
>gb|AY769321.1| Bombyx mori ribosomal protein S7 (RpS7) mRNA, complete cds Length = 657 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 424 ctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 468 ||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 275 ctgaacttcttttcgagctcacggacaagcctgatctggatcttc 231
>emb|AL353592.9| Human DNA sequence from clone RP11-569O12 on chromosome 13, complete sequence Length = 63325 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 tatccaacttgtactctgtgt 205 ||||||||||||||||||||| Sbjct: 33035 tatccaacttgtactctgtgt 33055
>gb|AF526221.1| Argopecten irradians isolate iolsaicl205ct237cn254 ribosomal protein S7 mRNA, complete cds Length = 651 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 421 ccgctgaacttcttctcgagctccctgac 449 |||||||||||||| || ||||||||||| Sbjct: 276 ccgctgaacttcttttccagctccctgac 248
>emb|AL391148.1|ATT21H19 Arabidopsis thaliana DNA chromosome 5, BAC clone T21H19 (ESSA project) Length = 77311 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 424 ctgaacttcttctcgagctccctgacgag 452 |||||||||||||| ||||| |||||||| Sbjct: 13437 ctgaacttcttctcaagctctctgacgag 13409
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 537 ctggaaggcggcgttgatgtagagg 561 |||||||||||| |||||||||||| Sbjct: 12815416 ctggaaggcggcattgatgtagagg 12815440
>emb|BX822663.1|CNS0A5ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 760 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 280 acaatctcagctgggtaaacaacatcctc 308 ||||||||||| |||||| |||||||||| Sbjct: 477 acaatctcagcagggtaagcaacatcctc 449
>gb|AY130375.1| Branchiostoma lanceolatum ribosomal protein S7 mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 417 cttgccgctgaacttcttctcgagctccc 445 |||||| |||||||||||||| ||||||| Sbjct: 241 cttgccactgaacttcttctccagctccc 213
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence Length = 78121 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 gggtggcctcacaatccgcct 395 ||||||||||||||||||||| Sbjct: 28376 gggtggcctcacaatccgcct 28396
>dbj|AK173962.1| Ciona intestinalis cDNA, clone:cixxx00042, full insert sequence Length = 675 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 ttgccgctgaacttcttctcgagctccct 446 |||||||| ||||||||||| |||||||| Sbjct: 361 ttgccgctaaacttcttctctagctccct 389
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 537 ctggaaggcggcgttgatgtagagg 561 |||||||||||| |||||||||||| Sbjct: 73540 ctggaaggcggcattgatgtagagg 73564
>dbj|AK112218.1| Ciona intestinalis cDNA, clone:ciad004i11, full insert sequence Length = 730 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 ttgccgctgaacttcttctcgagctccct 446 |||||||| ||||||||||| |||||||| Sbjct: 351 ttgccgctaaacttcttctctagctccct 323
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccacatccttgccacaaagc 162 |||||||||||||||||||| Sbjct: 118232 ccacatccttgccacaaagc 118213
>gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aattttgattttttgagtac 21 |||||||||||||||||||| Sbjct: 97930 aattttgattttttgagtac 97911
>ref|XM_581800.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S7 (S8) (LOC505507), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 412 acgtccttgccgctgaacttcttctcgagctc 443 |||| ||| ||||||||||||||||| ||||| Sbjct: 803 acgtgcttcccgctgaacttcttctccagctc 772
>ref|XM_425623.1| PREDICTED: Gallus gallus similar to Protocadherin 8 precursor (Arcadlin) (LOC428065), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gtccttgccgctgaacttct 433 |||||||||||||||||||| Sbjct: 2832 gtccttgccgctgaacttct 2813
>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete sequence Length = 154633 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tcctccaaaagaccatcatg 323 |||||||||||||||||||| Sbjct: 14399 tcctccaaaagaccatcatg 14418
>emb|CR847946.7| Zebrafish DNA sequence from clone CH211-274N1 in linkage group 18, complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 aacaacagcagaaccttttttggg 377 ||||| |||||||||||||||||| Sbjct: 88104 aacaaaagcagaaccttttttggg 88081
>ref|XM_651720.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (7.t00073) partial mRNA Length = 3231 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tttgagtacatgatccaata 32 |||||||||||||||||||| Sbjct: 1741 tttgagtacatgatccaata 1722
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 taattttgattttttgagta 20 |||||||||||||||||||| Sbjct: 132506 taattttgattttttgagta 132525
>emb|AL031780.1|HS470K1 Human DNA sequence from clone RP3-470K1 on chromosome 6p22.1-23, complete sequence Length = 103613 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ttttgagtacatgatccaat 31 |||||||||||||||||||| Sbjct: 42904 ttttgagtacatgatccaat 42923
>emb|BX036108.1|CNS0900W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 519 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 gtctttgacgtcgctcttga 580 |||||||||||||||||||| Sbjct: 360 gtctttgacgtcgctcttga 341
>emb|BX036107.1|CNS0900V Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA7DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 797 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 gtctttgacgtcgctcttga 580 |||||||||||||||||||| Sbjct: 468 gtctttgacgtcgctcttga 487
>emb|X85811.1|SCTRNAORF S.cerevisiae tRNA-Leu, and ORF's N2212, N2215, N2219, N2223, N2227, N2231 Length = 14261 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgaacagcagtcaaagttct 341 |||||||||||||||||||| Sbjct: 1311 tgaacagcagtcaaagttct 1330
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 acttcttctcgagctccctg 447 |||||||||||||||||||| Sbjct: 105724 acttcttctcgagctccctg 105743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 acttcttctcgagctccctg 447 |||||||||||||||||||| Sbjct: 66009 acttcttctcgagctccctg 66028
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tgaacagcagtcaaagttct 341 |||||||||||||||||||| Sbjct: 215257 tgaacagcagtcaaagttct 215238
>gb|DQ066326.1| Ixodes scapularis isolate IS-6-12L-109 40S ribosomal protein S7-like mRNA, partial cds Length = 594 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gccgctgaacttcttctcgagctc 443 |||||||||||||||||| ||||| Sbjct: 300 gccgctgaacttcttctccagctc 277
>gb|AF543540.1| Oncorhynchus mykiss 40S ribosomal protein S7 mRNA, partial cds Length = 132 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 421 ccgctgaacttcttctcgagctccctgacgag 452 |||||||||||||| || |||||||| ||||| Sbjct: 38 ccgctgaacttcttttccagctccctcacgag 7
>ref|XM_317713.2| Anopheles gambiae str. PEST ENSANGP00000010255 (ENSANGG00000007766), partial mRNA Length = 921 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 atcttgatgattttcgagcc 251 |||||||||||||||||||| Sbjct: 713 atcttgatgattttcgagcc 694
>ref|NM_208681.1| Eremothecium gossypii ACL076Wp (ACL076W), mRNA Length = 573 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tgaacagcagtcaaagttct 341 |||||||||||||||||||| Sbjct: 365 tgaacagcagtcaaagttct 346
>emb|Z71372.1|SCYNL096C S.cerevisiae chromosome XIV reading frame ORF YNL096c Length = 2553 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgaacagcagtcaaagttct 341 |||||||||||||||||||| Sbjct: 1248 tgaacagcagtcaaagttct 1267
>gb|DQ333046.1| Synthetic construct Saccharomyces cerevisiae clone FLH005626.01X RPS7B gene, complete sequence Length = 918 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tgaacagcagtcaaagttct 341 |||||||||||||||||||| Sbjct: 710 tgaacagcagtcaaagttct 691
>emb|CT032657.1| Platynereis dumerilii EST IB0AAA33DH04EM1 Length = 652 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ttgccgctgaacttcttctc 437 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032656.1| Platynereis dumerilii EST IB0AAA33DH04FM1 Length = 652 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ttgccgctgaacttcttctc 437 |||||||||||||||||||| Sbjct: 375 ttgccgctgaacttcttctc 394
>emb|CT032509.1| Platynereis dumerilii EST IB0AAA37AD11EM1 Length = 682 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ttgccgctgaacttcttctc 437 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032319.1| Platynereis dumerilii EST IB0AAA40DA08EM1 Length = 783 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ttgccgctgaacttcttctc 437 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032256.1| Platynereis dumerilii EST IB0AAA42AH05EM1 Length = 810 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ttgccgctgaacttcttctc 437 |||||||||||||||||||| Sbjct: 312 ttgccgctgaacttcttctc 293
>emb|AM159218.1| Oncorhynchus mykiss mRNA for 40S ribosomal protein S7 (rps7 gene) Length = 718 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 421 ccgctgaacttcttctcgagctccctgacgag 452 |||||||||||||| || |||||||| ||||| Sbjct: 399 ccgctgaacttcttttccagctccctcacgag 368
>gb|DQ115393.1| Saccharomyces cerevisiae Pol1p (POL1) gene, partial cds; and Avt4p (AVT4), Ynl100wp (YNL100W), Oca1p (OCA1), Ras2p (RAS2), Ynl097c-bp (YNL097C-B), Pho23p (PHO23), Rps7bp (RPS7B), Ynl095cp (YNL095C), App1p (APP1), Ypt53p (YPT53), Ynl092wp (YNL092W), Nst1p (NST1), Rho2p (RHO2), Ynl089cp (YNL089C), Top2p (TOP2), Tcb2p (TCB2), Ynl086wp (YNL086W), Mkt1p (MKT1), End3p (END3), Sal1p (SAL1), Pms1p (PMS1), Sws2p (SWS2), Ynl080cp (YNL080C), and Tpm1p (TPM1) genes, complete cds Length = 48787 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgaacagcagtcaaagttct 341 |||||||||||||||||||| Sbjct: 13003 tgaacagcagtcaaagttct 13022
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttttgattttttgagtacat 23 |||||||||||||||||||| Sbjct: 100007 ttttgattttttgagtacat 99988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,694,582 Number of Sequences: 3902068 Number of extensions: 5694582 Number of successful extensions: 131185 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130752 Number of HSP's gapped (non-prelim): 402 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)