ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29o21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465062.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2904 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Minus Query: 493 gaatcttcactcccactggcaataaaggcctgatccgatccaccaaagcacgatcttata 552 ||||||||||| ||||| |||||||||||||| || ||||||||||| || || ||||| Sbjct: 1614 gaatcttcactaccactagcaataaaggcctgctcggatccaccaaaacaagaccttatc 1555 Query: 553 acaaaccggctgcgcttatggccagtgtactgtttcactctactggggtcattctttatg 612 |||||||||||||||||||| |||| ||| | || |||| | ||||| |||| ||||| Sbjct: 1554 acaaaccggctgcgcttatgaccagcataccggttaactcgaatggggcaattccttatg 1495 Query: 613 ttccacaaatggatcttctcacttataagatttacaagcaagaaatctccatcatcagaa 672 ||||||||||| ||| |||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 1494 ttccacaaatgaatcgcctcacttataaggtttacaagcaagaaatcaccatcttctgaa 1435 Query: 673 agagaaaatgaagtgattgtatt 695 ||||||||||| ||||||||||| Sbjct: 1434 agagaaaatgatgtgattgtatt 1412 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 332 tggccttcttcaccccccatatacgaattgtgtgatcatcactcgcagaagcgagcatat 391 |||||||||| | ||||||||||||||||||||||||||||| ||||| || ||||| | Sbjct: 2574 tggccttctttaaaccccatatacgaattgtgtgatcatcacttgcagatgcaagcatgt 2515 Query: 392 gtggatttgtagggttccagcttacacagttgaccgcgccagagtgaccagaaagagtct 451 | ||||| | ||| |||||||| ||||||||||||| ||| | |||||||| ||||| | Sbjct: 2514 gcggattcgcaggattccagctcacacagttgaccgtgccggtgtgaccaggcagagttt 2455 Query: 452 cgataacatcttctgtagctctgagccatatata 485 | |||| |||| | |||||||| |||||||||| Sbjct: 2454 caataagatctccagtagctctatgccatatata 2421
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Minus Query: 493 gaatcttcactcccactggcaataaaggcctgatccgatccaccaaagcacgatcttata 552 ||||||||||| ||||| |||||||||||||| || ||||||||||| || || ||||| Sbjct: 11203483 gaatcttcactaccactagcaataaaggcctgctcggatccaccaaaacaagaccttatc 11203424 Query: 553 acaaaccggctgcgcttatggccagtgtactgtttcactctactggggtcattctttatg 612 |||||||||||||||||||| |||| ||| | || |||| | ||||| |||| ||||| Sbjct: 11203423 acaaaccggctgcgcttatgaccagcataccggttaactcgaatggggcaattccttatg 11203364 Query: 613 ttccacaaatggatcttctcacttataagatttacaagcaagaaatctccatcatcagaa 672 ||||||||||| ||| |||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 11203363 ttccacaaatgaatcgcctcacttataaggtttacaagcaagaaatcaccatcttctgaa 11203304 Query: 673 agagaaaatgaagtgattgtatt 695 ||||||||||| ||||||||||| Sbjct: 11203303 agagaaaatgatgtgattgtatt 11203281 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 332 tggccttcttcaccccccatatacgaattgtgtgatcatcactcgcagaagcgagcatat 391 |||||||||| | ||||||||||||||||||||||||||||| ||||| || ||||| | Sbjct: 11204443 tggccttctttaaaccccatatacgaattgtgtgatcatcacttgcagatgcaagcatgt 11204384 Query: 392 gtggatttgtagggttccagcttacacagttgaccgcgccagagtgaccagaaagagtct 451 | ||||| | ||| |||||||| ||||||||||||| ||| | |||||||| ||||| | Sbjct: 11204383 gcggattcgcaggattccagctcacacagttgaccgtgccggtgtgaccaggcagagttt 11204324 Query: 452 cgataacatcttctgtagctctgagccatatata 485 | |||| |||| | |||||||| |||||||||| Sbjct: 11204323 caataagatctccagtagctctatgccatatata 11204290
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Minus Query: 493 gaatcttcactcccactggcaataaaggcctgatccgatccaccaaagcacgatcttata 552 ||||||||||| ||||| |||||||||||||| || ||||||||||| || || ||||| Sbjct: 6298 gaatcttcactaccactagcaataaaggcctgctcggatccaccaaaacaagaccttatc 6239 Query: 553 acaaaccggctgcgcttatggccagtgtactgtttcactctactggggtcattctttatg 612 |||||||||||||||||||| |||| ||| | || |||| | ||||| |||| ||||| Sbjct: 6238 acaaaccggctgcgcttatgaccagcataccggttaactcgaatggggcaattccttatg 6179 Query: 613 ttccacaaatggatcttctcacttataagatttacaagcaagaaatctccatcatcagaa 672 ||||||||||| ||| |||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 6178 ttccacaaatgaatcgcctcacttataaggtttacaagcaagaaatcaccatcttctgaa 6119 Query: 673 agagaaaatgaagtgattgtatt 695 ||||||||||| ||||||||||| Sbjct: 6118 agagaaaatgatgtgattgtatt 6096 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 332 tggccttcttcaccccccatatacgaattgtgtgatcatcactcgcagaagcgagcatat 391 |||||||||| | ||||||||||||||||||||||||||||| ||||| || ||||| | Sbjct: 7258 tggccttctttaaaccccatatacgaattgtgtgatcatcacttgcagatgcaagcatgt 7199 Query: 392 gtggatttgtagggttccagcttacacagttgaccgcgccagagtgaccagaaagagtct 451 | ||||| | ||| |||||||| ||||||||||||| ||| | |||||||| ||||| | Sbjct: 7198 gcggattcgcaggattccagctcacacagttgaccgtgccggtgtgaccaggcagagttt 7139 Query: 452 cgataacatcttctgtagctctgagccatatata 485 | |||| |||| | |||||||| |||||||||| Sbjct: 7138 caataagatctccagtagctctatgccatatata 7105
>dbj|AK101077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024C11, full insert sequence Length = 3204 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Minus Query: 493 gaatcttcactcccactggcaataaaggcctgatccgatccaccaaagcacgatcttata 552 ||||||||||| ||||| |||||||||||||| || ||||||||||| || || ||||| Sbjct: 1914 gaatcttcactaccactagcaataaaggcctgctcggatccaccaaaacaagaccttatc 1855 Query: 553 acaaaccggctgcgcttatggccagtgtactgtttcactctactggggtcattctttatg 612 |||||||||||||||||||| |||| ||| | || |||| | ||||| |||| ||||| Sbjct: 1854 acaaaccggctgcgcttatgaccagcataccggttaactcgaatggggcaattccttatg 1795 Query: 613 ttccacaaatggatcttctcacttataagatttacaagcaagaaatctccatcatcagaa 672 ||||||||||| ||| |||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 1794 ttccacaaatgaatcgcctcacttataaggtttacaagcaagaaatcaccatcttctgaa 1735 Query: 673 agagaaaatgaagtgattgtatt 695 ||||||||||| ||||||||||| Sbjct: 1734 agagaaaatgatgtgattgtatt 1712 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 332 tggccttcttcaccccccatatacgaattgtgtgatcatcactcgcagaagcgagcatat 391 |||||||||| | ||||||||||||||||||||||||||||| ||||| || ||||| | Sbjct: 2874 tggccttctttaaaccccatatacgaattgtgtgatcatcacttgcagatgcaagcatgt 2815 Query: 392 gtggatttgtagggttccagcttacacagttgaccgcgccagagtgaccagaaagagtct 451 | ||||| | ||| |||||||| ||||||||||||| ||| | |||||||| ||||| | Sbjct: 2814 gcggattcgcaggattccagctcacacagttgaccgtgccggtgtgaccaggcagagttt 2755 Query: 452 cgataacatcttctgtagctctgagccatatata 485 | |||| |||| | |||||||| |||||||||| Sbjct: 2754 caataagatctccagtagctctatgccatatata 2721
>gb|AY106061.1| Zea mays PCO065638 mRNA sequence Length = 870 Score = 157 bits (79), Expect = 6e-35 Identities = 292/363 (80%) Strand = Plus / Minus Query: 331 ctggccttcttcaccccccatatacgaattgtgtgatcatcactcgcagaagcgagcata 390 |||| |||||| ||||||||||||||| ||||||||| || ||||| || |||||||| Sbjct: 407 ctggacttctttgccccccatatacgaactgtgtgatcgtcgctcgctgaggcgagcatg 348 Query: 391 tgtggatttgtagggttccagcttacacagttgaccgcgccagagtgaccagaaagagtc 450 || ||||| | ||| ||||| || || |||||||| | ||| |||||||||| ||||||| Sbjct: 347 tggggattcgcaggattccaactgacgcagttgactgtgcccgagtgaccagcaagagtc 288 Query: 451 tcgataacatcttctgtagctctgagccatatatacaccttcgaatcttcactcccactg 510 || || | ||| | || ||||| ||||||| || |||| ||||||||||||||||| Sbjct: 287 tcaatgagatcgccagtggctctatgccatatgtagacctgtgaatcttcactcccacta 228 Query: 511 gcaataaaggcctgatccgatccaccaaagcacgatcttataacaaaccggctgcgctta 570 ||||| || ||||| || |||| ||||| || || ||||| ||||||||| |||||||| Sbjct: 227 gcaatgaacgcctgctcaaatccgccaaaacaagaccttatcacaaaccgggtgcgctta 168 Query: 571 tggccagtgtactgtttcactctactggggtcattctttatgttccacaaatggatcttc 630 || ||| ||||| | || || | | || ||||| |||||||||||||||| |||| Sbjct: 167 tgaccattgtaccggttgacacgaacaggatcatttcttatgttccacaaatgaatctct 108 Query: 631 tcacttataagatttacaagcaagaaatctccatcatcagaaagagaaaatgaagtgatt 690 || |||| |||||||||||||| |||||| || || || || ||| |||||||||| ||| Sbjct: 107 tcgcttacaagatttacaagcaggaaatcaccgtcttctgatagacaaaatgaagtaatt 48 Query: 691 gta 693 ||| Sbjct: 47 gta 45
>gb|BT024002.1| Zea mays clone EL01N0404E06 mRNA sequence Length = 1771 Score = 149 bits (75), Expect = 1e-32 Identities = 291/363 (80%) Strand = Plus / Minus Query: 331 ctggccttcttcaccccccatatacgaattgtgtgatcatcactcgcagaagcgagcata 390 |||| |||||| ||||||||||||||| ||||||||| || ||||| || |||||||| Sbjct: 1181 ctggacttctttgccccccatatacgaactgtgtgatcgtcgctcgctgaggcgagcatg 1122 Query: 391 tgtggatttgtagggttccagcttacacagttgaccgcgccagagtgaccagaaagagtc 450 || ||||| | ||| ||||| || || |||||||| | ||| |||||||||| ||||||| Sbjct: 1121 tggggattcgcaggattccaactgacgcagttgactgtgcccgagtgaccagcaagagtc 1062 Query: 451 tcgataacatcttctgtagctctgagccatatatacaccttcgaatcttcactcccactg 510 || || | ||| | || ||||| || |||| || |||| ||||||||||||||||| Sbjct: 1061 tcaatgagatcgccagtggctctatgcgatatgtagacctgtgaatcttcactcccacta 1002 Query: 511 gcaataaaggcctgatccgatccaccaaagcacgatcttataacaaaccggctgcgctta 570 ||||| || ||||| || |||| ||||| || || ||||| ||||||||| |||||||| Sbjct: 1001 gcaatgaacgcctgctcaaatccgccaaaacaagaccttatcacaaaccgggtgcgctta 942 Query: 571 tggccagtgtactgtttcactctactggggtcattctttatgttccacaaatggatcttc 630 || ||| ||||| | || || | | || ||||| |||||||||||||||| |||| Sbjct: 941 tgaccattgtaccggttgacacgaacaggatcatttcttatgttccacaaatgaatctct 882 Query: 631 tcacttataagatttacaagcaagaaatctccatcatcagaaagagaaaatgaagtgatt 690 || |||| |||||||||||||| |||||| || || || || ||| |||||||||| ||| Sbjct: 881 tcgcttacaagatttacaagcaggaaatcaccgtcttctgatagacaaaatgaagtaatt 822 Query: 691 gta 693 ||| Sbjct: 821 gta 819
>gb|BT012687.1| Lycopersicon esculentum clone 113537R, mRNA sequence Length = 2269 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 346 ccccatatacgaattgtgtgatcatcactcgcagaagcgagcatatgtggatttgtaggg 405 |||||||| |||||||| ||||||||||| |||||||| | |||||| |||| || || Sbjct: 1928 ccccatatgcgaattgtatgatcatcactagcagaagccaacatatgaggatctgctgga 1869 Query: 406 ttccagcttacacagtt 422 |||||||| |||||||| Sbjct: 1868 ttccagctaacacagtt 1852
>ref|NM_123759.1| Arabidopsis thaliana nucleotide binding AT5G43920 mRNA, complete cds Length = 1572 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 346 ccccatatacgaattgtgtgatcatcactcgcagaagcgagcatatgtggatttgtaggg 405 ||||| ||||| || || || |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 1541 ccccaaatacggatggtttggtcatcactagcagaggctagcatccgaggatttttcggg 1482 Query: 406 ttccagcttacacagtt 422 ||||||||||||||||| Sbjct: 1481 ttccagcttacacagtt 1465
>gb|AY056253.1| Arabidopsis thaliana putative WD-repeat protein (At5g43920) mRNA, complete cds Length = 2571 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 346 ccccatatacgaattgtgtgatcatcactcgcagaagcgagcatatgtggatttgtaggg 405 ||||| ||||| || || || |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 2155 ccccaaatacggatggtttggtcatcactagcagaggctagcatccgaggatttttcggg 2096 Query: 406 ttccagcttacacagtt 422 ||||||||||||||||| Sbjct: 2095 ttccagcttacacagtt 2079
>emb|BX831102.1|CNS0A272 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS58ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2437 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 346 ccccatatacgaattgtgtgatcatcactcgcagaagcgagcatatgtggatttgtaggg 405 ||||| ||||| || || || |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 2088 ccccaaatacggatggtttggtcatcactagcagaggctagcatccgaggatttttcggg 2029 Query: 406 ttccagcttacacagtt 422 ||||||||||||||||| Sbjct: 2028 ttccagcttacacagtt 2012
>dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRH10 Length = 71522 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 346 ccccatatacgaattgtgtgatcatcactcgcagaagcgagcatatgtggatttgtaggg 405 ||||| ||||| || || || |||||||| ||||| || ||||| | |||||| | ||| Sbjct: 5693 ccccaaatacggatggtttggtcatcactagcagaggctagcatccgaggatttttcggg 5634 Query: 406 ttccagcttacacagtt 422 ||||||||||||||||| Sbjct: 5633 ttccagcttacacagtt 5617
>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 180339 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 286 gtcccattgctgctactgctgct 308 ||||||||||||||||||||||| Sbjct: 3768 gtcccattgctgctactgctgct 3746
>emb|BX914201.6| Zebrafish DNA sequence from clone DKEYP-108B3 in linkage group 21, complete sequence Length = 162420 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 gtgcataaaaccaagcaggtttt 90 ||||||||||||||||||||||| Sbjct: 115435 gtgcataaaaccaagcaggtttt 115457
>gb|AC104183.2| Homo sapiens chromosome 3 clone RP11-180N14, complete sequence Length = 169709 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaagaa 169 |||||||||||||||||||||| Sbjct: 22343 gaaaggaaagcaaagcaaagaa 22322
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 aaagcaaagaaggatttacaaa 180 |||||||||||||||||||||| Sbjct: 130932 aaagcaaagaaggatttacaaa 130911
>gb|L08199.1|COTPROXDS Gossypium hirsutum peroxidase mRNA, complete cds Length = 1333 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 aaaggaaagcaaagcaaagaag 170 |||||||||||||||||||||| Sbjct: 100 aaaggaaagcaaagcaaagaag 79
>gb|DQ214703.1| Taeniopygia guttata clone 0058P0049B06 mitochondrial ribosomal protein S18A-like mRNA, complete sequence Length = 1259 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ttctttatgttccacaaatgg 624 ||||||||||||||||||||| Sbjct: 839 ttctttatgttccacaaatgg 859
>gb|DQ214702.1| Taeniopygia guttata clone 0058P0029B09 mitochondrial ribosomal protein S18A-like mRNA, complete sequence Length = 1259 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ttctttatgttccacaaatgg 624 ||||||||||||||||||||| Sbjct: 839 ttctttatgttccacaaatgg 859
>gb|AC007862.7| Trypanosoma brucei chromosome 2 clone RPCI93-10C8, complete sequence Length = 150671 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctgc 310 ||||||||||||||||||||| Sbjct: 105520 cattgctgctactgctgctgc 105500
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctgc 310 ||||||||||||||||||||| Sbjct: 583924 cattgctgctactgctgctgc 583904
>gb|AC012164.12| Drosophila melanogaster clone BACR14D22, complete sequence Length = 169385 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctgc 310 ||||||||||||||||||||| Sbjct: 149827 cattgctgctactgctgctgc 149807
>gb|AY566626.1| Rhododendron macrophyllum RNA polymerase II second largest subunit (RPB2) gene, partial cds Length = 4318 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 catggatcaaactatcatcatttgc 226 |||| |||||||||||||||||||| Sbjct: 444 catgcatcaaactatcatcatttgc 468
>ref|XM_968399.1| PREDICTED: Tribolium castaneum similar to WD-repeat protein 26 (LOC662293), mRNA Length = 1668 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 496 tcttcactcccactggcaataaaggcctg 524 ||||||||||||||||| |||||| |||| Sbjct: 1472 tcttcactcccactggcgataaagtcctg 1444
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 367 tcatcactcgcagaagcgagcatatgtggatttgtagggttccagcttacaca 419 |||||||| || ||||| ||||||||||| || | ||| |||||||| ||||| Sbjct: 15924 tcatcacttgccgaagccagcatatgtggcttagcaggattccagctcacaca 15872
>gb|AC116025.21| Homo sapiens chromosome 17, clone CTD-2529O21, complete sequence Length = 209109 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 cccattgctgctactgctgct 308 ||||||||||||||||||||| Sbjct: 27591 cccattgctgctactgctgct 27611
>ref|NM_166511.1| Drosophila melanogaster CG13503-RD, transcript variant D (CG13503), mRNA Length = 3327 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 467 ccattgctgctactgctgctg 447
>ref|NM_166510.1| Drosophila melanogaster CG13503-RC, transcript variant C (CG13503), mRNA Length = 3341 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 481 ccattgctgctactgctgctg 461
>ref|NM_166509.1| Drosophila melanogaster CG13503-RB, transcript variant B (CG13503), mRNA Length = 3672 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 812 ccattgctgctactgctgctg 792
>ref|NM_166508.1| Drosophila melanogaster CG13503-RA, transcript variant A (CG13503), mRNA Length = 3798 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 938 ccattgctgctactgctgctg 918
>ref|NM_166507.1| Drosophila melanogaster CG13503-RF, transcript variant F (CG13503), mRNA Length = 3669 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 938 ccattgctgctactgctgctg 918
>ref|NM_137796.2| Drosophila melanogaster CG13503-RE, transcript variant E (CG13503), mRNA Length = 3261 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 401 ccattgctgctactgctgctg 381
>gb|AY094731.1| Drosophila melanogaster GH25793 full insert cDNA Length = 3733 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 977 ccattgctgctactgctgctg 957
>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome Length = 280334 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 663 atcatcagaaagagaaaatga 683 ||||||||||||||||||||| Sbjct: 13220 atcatcagaaagagaaaatga 13200
>gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58C-58D, BAC clone BACR02O12, complete sequence Length = 171594 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 134028 ccattgctgctactgctgctg 134008
>emb|CR388782.1| Gallus gallus finished cDNA, clone ChEST889l8 Length = 530 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 tgtggatttgtagggttccagctta 415 |||| |||||||||||||||||||| Sbjct: 54 tgtgcatttgtagggttccagctta 78
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 367 tcatcactcgcagaagcgagcatatgtggatttgtagggttccagcttacaca 419 |||||||| || ||||| ||||||||||| || | ||| |||||||| ||||| Sbjct: 16643918 tcatcacttgccgaagccagcatatgtggcttagcaggattccagctcacaca 16643970
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cattgctgctactgctgctgc 310 ||||||||||||||||||||| Sbjct: 172969 cattgctgctactgctgctgc 172989
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete sequence Length = 75948 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 671 aaagagaaaatgaagtgattg 691 ||||||||||||||||||||| Sbjct: 39875 aaagagaaaatgaagtgattg 39855
>gb|AC100791.15| Homo sapiens chromosome 17, clone RP11-353N14, complete sequence Length = 215313 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 cccattgctgctactgctgct 308 ||||||||||||||||||||| Sbjct: 127672 cccattgctgctactgctgct 127692
>gb|AC130454.2| Homo sapiens chromosome 16 clone CTA-345G4, complete sequence Length = 260160 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcct 312 ||||||||||||||||||||| Sbjct: 57536 ttgctgctactgctgctgcct 57556
>gb|DQ163920.1| Bacteriophage SD1-M, complete genome Length = 281083 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 663 atcatcagaaagagaaaatga 683 ||||||||||||||||||||| Sbjct: 14315 atcatcagaaagagaaaatga 14295
>dbj|AK111822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N14, full insert sequence Length = 3893 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 367 tcatcactcgcagaagcgagcatatgtggatttgtagggttccagcttacaca 419 |||||||| || ||||| ||||||||||| || | ||| |||||||| ||||| Sbjct: 3524 tcatcacttgccgaagccagcatatgtggcttagcaggattccagctcacaca 3472
>dbj|AK111526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F21, full insert sequence Length = 2111 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 367 tcatcactcgcagaagcgagcatatgtggatttgtagggttccagcttacaca 419 |||||||| || ||||| ||||||||||| || | ||| |||||||| ||||| Sbjct: 1746 tcatcacttgccgaagccagcatatgtggcttagcaggattccagctcacaca 1694
>ref|XM_316089.2| Anopheles gambiae str. PEST ENSANGP00000005867 (ENSANGG00000004462), partial mRNA Length = 1563 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 gggttccagcttacacagttgaccg 427 ||||||||||| ||||||||||||| Sbjct: 1481 gggttccagctgacacagttgaccg 1457
>dbj|AK072090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J15, full insert sequence Length = 2154 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 367 tcatcactcgcagaagcgagcatatgtggatttgtagggttccagcttacaca 419 |||||||| || ||||| ||||||||||| || | ||| |||||||| ||||| Sbjct: 1793 tcatcacttgccgaagccagcatatgtggcttagcaggattccagctcacaca 1741
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cattgctgctactgctgctgc 310 ||||||||||||||||||||| Sbjct: 237393 cattgctgctactgctgctgc 237413
>gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64 of 73 of the complete sequence Length = 288451 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 114198 ccattgctgctactgctgctg 114218
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 367 tcatcactcgcagaagcgagcatatgtggatttgtagggttccagcttacaca 419 |||||||| || ||||| ||||||||||| || | ||| |||||||| ||||| Sbjct: 16652559 tcatcacttgccgaagccagcatatgtggcttagcaggattccagctcacaca 16652611
>gb|AC004365.1|AC004365 Drosophila melanogaster (P1 DS00642 (D59)) DNA sequence, complete sequence Length = 64078 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccattgctgctactgctgctg 309 ||||||||||||||||||||| Sbjct: 6864 ccattgctgctactgctgctg 6844
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 79116 attgctgctactgctgctgc 79135
>ref|XM_531176.1| PREDICTED: Pan troglodytes LOC464566 (LOC464566), mRNA Length = 655 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctg 309 |||||||||||||||||||| Sbjct: 312 cattgctgctactgctgctg 293
>ref|NM_190045.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 26 ttgctgctactgctgctgcc 7
>gb|AC169819.2| Rhesus Macaque BAC CH250-132C22 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 176070 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 671 aaagagaaaatgaagtgattgtat 694 ||||||||||||| |||||||||| Sbjct: 80379 aaagagaaaatgatgtgattgtat 80402
>gb|AF230978.1| Trypanosoma cruzi ABCA1 transporter gene, complete cds Length = 5253 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tggtgttcttcctggcgaaa 151 |||||||||||||||||||| Sbjct: 4377 tggtgttcttcctggcgaaa 4396
>gb|L19986.1|AH000852S03 Bos taurus lactoferrin gene, exons 3-6 Length = 3751 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 2318 gaaaggaaagcaaagcaaag 2299
>gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, complete sequence Length = 159541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctg 309 |||||||||||||||||||| Sbjct: 134366 cattgctgctactgctgctg 134347
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tgctgctactgctgctgcct 312 |||||||||||||||||||| Sbjct: 129598 tgctgctactgctgctgcct 129579
>gb|AF413052.1|AF413052S1 Zea mays CAG and TAG long trinucleotide repeat Length = 542 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 485 attgctgctactgctgctgc 466
>gb|L24753.1|BOVLACTFER Bos taurus lactoferrin gene, exons 3 through 6 and partial cds Length = 3751 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 2318 gaaaggaaagcaaagcaaag 2299
>gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, complete sequence Length = 247484 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 10712 attgctgctactgctgctgc 10693
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ttgtgctggccttcttcacc 345 |||||||||||||||||||| Sbjct: 2477549 ttgtgctggccttcttcacc 2477568
>ref|XM_593456.2| PREDICTED: Bos taurus similar to Glucagon receptor precursor (GL-R) (LOC515433), mRNA Length = 1966 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 agtcccattgctgctactgc 304 |||||||||||||||||||| Sbjct: 1617 agtcccattgctgctactgc 1598
>ref|XM_419004.1| PREDICTED: Gallus gallus similar to triple functional domain (PTPRF interacting) (LOC420919), mRNA Length = 10455 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 1432 attgctgctactgctgctgc 1451
>gb|BC053170.1| Danio rerio translocase of inner mitochondrial membrane 23 homolog (yeast), mRNA (cDNA clone MGC:63963 IMAGE:6791981), complete cds Length = 1318 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 cgctttgtgctggccttcttcacc 345 ||||||| |||||||||||||||| Sbjct: 466 cgctttgagctggccttcttcacc 489
>ref|XM_956323.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU01330.1) partial mRNA Length = 3036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tgctgctactgctgctgcct 312 |||||||||||||||||||| Sbjct: 2625 tgctgctactgctgctgcct 2644
>ref|XM_326822.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU01330.1) partial mRNA Length = 3036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tgctgctactgctgctgcct 312 |||||||||||||||||||| Sbjct: 2625 tgctgctactgctgctgcct 2644
>gb|AC147231.2| Mus musculus BAC clone RP23-250I21 from chromosome 9, complete sequence Length = 215395 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 204602 gaaaggaaagcaaagcaaag 204621
>gb|BT013312.1| Lycopersicon esculentum clone 134986R, mRNA sequence Length = 526 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 250 ttgctgctactgctgctgcc 231
>gb|AC166820.2| Mus musculus BAC clone RP24-287O2 from chromosome 15, complete sequence Length = 137033 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 61035 gaaaggaaagcaaagcaaag 61016
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 9682852 ttgctgctactgctgctgcc 9682871
>emb|CR788319.8| Zebrafish DNA sequence from clone DKEY-245H10 in linkage group 12, complete sequence Length = 188205 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 cgctttgtgctggccttcttcacc 345 ||||||| |||||||||||||||| Sbjct: 146737 cgctttgagctggccttcttcacc 146760
>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete sequence Length = 199938 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 131416 gaaaggaaagcaaagcaaag 131435 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 670 gaaagagaaaatgaagtgattgtattat 697 |||||||||||||| |||||| |||||| Sbjct: 20908 gaaagagaaaatgatgtgattatattat 20881
>gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome 9, complete sequence Length = 175852 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 41777 gaaaggaaagcaaagcaaag 41796
>ref|XM_813005.1| Trypanosoma cruzi strain CL Brener ATP-binding cassette transporter ABCA1 (Tc00.1047053504149.20) partial mRNA Length = 5253 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tggtgttcttcctggcgaaa 151 |||||||||||||||||||| Sbjct: 4377 tggtgttcttcctggcgaaa 4396
>gb|AC103982.10| Homo sapiens chromosome 15, clone RP11-343B18, complete sequence Length = 197370 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 177905 attgctgctactgctgctgc 177924
>gb|AC122845.4| Mus musculus BAC clone RP23-155G2 from 1, complete sequence Length = 215455 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 44945 gaaaggaaagcaaagcaaag 44964
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 77584 gaaaggaaagcaaagcaaag 77565
>gb|AC154171.5| Mus musculus BAC clone RP24-259F16 from chromosome 13, complete sequence Length = 173300 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 144340 gaaaggaaagcaaagcaaag 144321
>gb|AC102675.9| Mus musculus, clone RP23-232O16, complete sequence Length = 208734 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 26549 gaaaggaaagcaaagcaaag 26568
>emb|AL513484.6| Human DNA sequence from clone RP13-223P22 on chromosome Xq11.1-13.1, complete sequence Length = 59637 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 aaggaaagcaaagcaaagaa 169 |||||||||||||||||||| Sbjct: 22605 aaggaaagcaaagcaaagaa 22586
>emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chromosome X Contains a pseudogene similar to part of SLC9A2 (solute carrier family 9 (sodium/hydrogen exchanger), isoform 2), complete sequence Length = 190604 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 673 agagaaaatgaagtgattgt 692 |||||||||||||||||||| Sbjct: 132918 agagaaaatgaagtgattgt 132937
>emb|AL354938.12| Human DNA sequence from clone RP11-86L19 on chromosome 9 Contains the 3' end of the SMC2L1 gene for SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E), a novel pseudogene and a CpG island, complete sequence Length = 179738 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aggaaagcaaagcaaagaag 170 |||||||||||||||||||| Sbjct: 114023 aggaaagcaaagcaaagaag 114042
>emb|AL158068.18| Human DNA sequence from clone RP11-478C1 on chromosome 4, complete sequence Length = 178338 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 129745 gaaaggaaagcaaagcaaag 129764
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 188357 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctg 309 |||||||||||||||||||| Sbjct: 60155 cattgctgctactgctgctg 60136
>emb|AL118523.18|HSJ1031J8 Human DNA sequence from clone RP5-1031J8 on chromosome 20 Contains a putative novel gene, STSs and GSSs, complete sequence Length = 155213 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 151643 gaaaggaaagcaaagcaaag 151624
>gb|AC164610.3| Mus musculus BAC clone RP23-422D16 from chromosome 6, complete sequence Length = 200529 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 tactgctgctgcctatgtcc 318 |||||||||||||||||||| Sbjct: 154990 tactgctgctgcctatgtcc 155009
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 103751 ttgctgctactgctgctgcc 103770
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ttactgcagctttgttttca 127 |||||||||||||||||||| Sbjct: 468694 ttactgcagctttgttttca 468713
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tgctgctactgctgctgcct 312 |||||||||||||||||||| Sbjct: 31090 tgctgctactgctgctgcct 31071
>gb|AC164524.5| Mus musculus BAC RP23-438F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180937 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||| |||||||||| Sbjct: 119808 tcccattgctgctgctgctgctgc 119831
>gb|AC154755.2| Mus musculus BAC clone RP24-406B22 from chromosome 13, complete sequence Length = 180363 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 41316 gaaaggaaagcaaagcaaag 41335
>gb|AC142249.6| Mus musculus chromosome 19, clone RP23-388O22, complete sequence Length = 201321 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 662 catcatcagaaagagaaaat 681 |||||||||||||||||||| Sbjct: 129535 catcatcagaaagagaaaat 129516
>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23, complete sequence Length = 171486 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 671 aaagagaaaatgaagtgatt 690 |||||||||||||||||||| Sbjct: 36245 aaagagaaaatgaagtgatt 36226
>gb|AF246966.1| Lycopersicon pennellii receptor-like protein kinase (PRK1) mRNA, partial cds Length = 843 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 368 attgctgctactgctgctgc 349
>gb|AF246965.1| Solanum tuberosum receptor-like protein kinase (PRK1) mRNA, partial cds Length = 852 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 368 attgctgctactgctgctgc 349
>gb|AC010060.10| Drosophila melanogaster 3L BAC RP98-22J22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200985 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cattgctgctactgctgctg 309 |||||||||||||||||||| Sbjct: 115449 cattgctgctactgctgctg 115468
>gb|AC114495.2| Homo sapiens chromosome 1 clone RP11-490K7, complete sequence Length = 174903 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 5339 gaaaggaaagcaaagcaaag 5320
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 aaaggaaagcaaagcaaagaagga 172 ||||||||||||||||||| |||| Sbjct: 2019993 aaaggaaagcaaagcaaaggagga 2019970
>emb|AL928632.13| Mouse DNA sequence from clone RP23-303M15 on chromosome 2, complete sequence Length = 217309 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||| |||||||||| Sbjct: 108633 tcccattgctgctgctgctgctgc 108610
>gb|AF506231.1| Danio rerio mitochondrial inner membrane translocating protein (timm23) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1254 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 cgctttgtgctggccttcttcacc 345 ||||||| |||||||||||||||| Sbjct: 465 cgctttgagctggccttcttcacc 488
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||||||||| |||| Sbjct: 125999 tcccattgctgctactgctactgc 125976
>ref|NM_079905.2| Drosophila melanogaster almondex CG12127-RA (amx), mRNA Length = 1426 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||||||||| |||| Sbjct: 588 tcccattgctgctactgctactgc 565
>ref|XM_940801.1| PREDICTED: Homo sapiens similar to ectonucleoside triphosphate diphosphohydrolase 6 (putative function) (LOC654196), mRNA Length = 1802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ccagagtgaccagaaagagt 449 |||||||||||||||||||| Sbjct: 75 ccagagtgaccagaaagagt 94
>ref|XM_928363.1| PREDICTED: Homo sapiens similar to ectonucleoside triphosphate diphosphohydrolase 6 (putative function) (LOC653605), mRNA Length = 1802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ccagagtgaccagaaagagt 449 |||||||||||||||||||| Sbjct: 75 ccagagtgaccagaaagagt 94
>gb|AC067805.9| Homo sapiens chromosome 15, clone RP11-63A23, complete sequence Length = 170883 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 61310 attgctgctactgctgctgc 61329
>gb|AC092225.1|AC092225 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR18J08, complete sequence Length = 186803 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 92635 attgctgctactgctgctgc 92616
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 9680973 ttgctgctactgctgctgcc 9680992
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 40995987 ttgctgctactgctgctgcc 40996006
>gb|DQ060036.1| Homo sapiens polymerase (DNA directed) nu (POLN) gene, complete cds Length = 161222 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 10938 gaaaggaaagcaaagcaaag 10957
>gb|AC082651.6| Homo sapiens BAC clone RP11-521D12 from 2, complete sequence Length = 203770 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 201224 gaaaggaaagcaaagcaaag 201243
>gb|AC158687.2| Mus musculus 10 BAC RP24-423N13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154559 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 670 gaaagagaaaatgaagtgattgtattat 697 |||||||||||||| |||||| |||||| Sbjct: 146011 gaaagagaaaatgatgtgattatattat 145984
>ref|NM_173256.1| Danio rerio translocase of inner mitochondrial membrane 23 homolog (yeast) (timm23), mRNA Length = 1318 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 cgctttgtgctggccttcttcacc 345 ||||||| |||||||||||||||| Sbjct: 466 cgctttgagctggccttcttcacc 489
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 12037 gaaaggaaagcaaagcaaag 12018
>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167875 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 155031 gaaaggaaagcaaagcaaag 155050
>gb|AC027296.21| Homo sapiens 3 BAC RP11-309L4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127230 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 654 gaaatctccatcatcagaaa 673 |||||||||||||||||||| Sbjct: 30752 gaaatctccatcatcagaaa 30771
>gb|AF261109.1|F261109S01 Mus musculus type XV collagen (Col15a1) gene, exons 1 and 2 Length = 5489 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tgctgctactgctgctgcct 312 |||||||||||||||||||| Sbjct: 1216 tgctgctactgctgctgcct 1197
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 32917 ttgctgctactgctgctgcc 32936
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 124412 ttgctgctactgctgctgcc 124431
>gb|AC078847.2|AC078847 Homo sapiens chromosome 7 clone RP11-3M15, complete sequence Length = 170919 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gaaagcaaagcaaagaagga 172 |||||||||||||||||||| Sbjct: 75061 gaaagcaaagcaaagaagga 75080 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gaaagcaaagcaaagaagga 172 |||||||||||||||||||| Sbjct: 40037 gaaagcaaagcaaagaagga 40056
>gb|AC007395.3|AC007395 Homo sapiens BAC clone RP11-504O1 from 2, complete sequence Length = 158458 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 671 aaagagaaaatgaagtgatt 690 |||||||||||||||||||| Sbjct: 134206 aaagagaaaatgaagtgatt 134225
>gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G19, complete sequence Length = 163631 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gaaagcaaagcaaagaagga 172 |||||||||||||||||||| Sbjct: 38513 gaaagcaaagcaaagaagga 38494 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gaaagcaaagcaaagaagga 172 |||||||||||||||||||| Sbjct: 3491 gaaagcaaagcaaagaagga 3472
>gb|AC174480.1| Mus musculus BAC clone RP23-154N2 from chromosome 1, complete sequence Length = 207205 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaagaaggattt 175 |||||||||| |||| |||||||||||| Sbjct: 153078 gaaaggaaaggaaaggaaagaaggattt 153105
>gb|AF217797.2|AF217797 Drosophila melanogaster almondex (amx) mRNA, complete cds Length = 1190 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||||||||| |||| Sbjct: 356 tcccattgctgctactgctactgc 333
>emb|AJ538983.1|NTA538983 Nicotiana tabacum cDNA-AFLP-fragment BT34-M1-008 Length = 333 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 188 ttgctgctactgctgctgcc 207
>dbj|AK099792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E21, full insert sequence Length = 4332 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 4189 ttgctgctactgctgctgcc 4208
>dbj|AK073211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014N13, full insert sequence Length = 2411 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 1754 ttgctgctactgctgctgcc 1773
>gb|AF181623.1|AF181623 Drosophila melanogaster BcDNA.GH02974 (BcDNA.GH02974) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||||||||| |||| Sbjct: 588 tcccattgctgctactgctactgc 565
>dbj|AK072603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131L10, full insert sequence Length = 943 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ttgctgctactgctgctgcc 311 |||||||||||||||||||| Sbjct: 106 ttgctgctactgctgctgcc 87
>gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, complete sequence Length = 250519 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 154099 attgctgctactgctgctgc 154118
>emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in linkage group 4, complete sequence Length = 230105 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cattgctgctactgctgctg 309 |||||||||||||||||||| Sbjct: 160124 cattgctgctactgctgctg 160105
>gb|AE003642.3| Drosophila melanogaster chromosome 2L, section 51 of 83 of the complete sequence Length = 276521 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 171010 attgctgctactgctgctgc 171029
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cattgctgctactgctgctg 309 |||||||||||||||||||| Sbjct: 240005 cattgctgctactgctgctg 240024
>emb|AL121594.6|CNS01DRY Human chromosome 14 DNA sequence BAC R-173D9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196023 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 168281 gaaaggaaagcaaagcaaag 168262
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcccattgctgctactgctgctgc 310 ||||||||||||||||||| |||| Sbjct: 197722 tcccattgctgctactgctactgc 197745
>gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215547 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 21414 gaaaggaaagcaaagcaaag 21395
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 162234 gaaaggaaagcaaagcaaag 162253
>gb|AC147184.3| Mus musculus BAC clone RP24-286F20 from 1, complete sequence Length = 176857 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 35096 gaaaggaaagcaaagcaaag 35077
>gb|U58474.1|SLU58474 Lycopersicon esculentum receptor-like protein kinase (LePRK1) mRNA, complete cds Length = 2387 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 attgctgctactgctgctgc 310 |||||||||||||||||||| Sbjct: 911 attgctgctactgctgctgc 892
>gb|AC111009.5| Mus musculus BAC clone RP23-418A13 from 9, complete sequence Length = 194287 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 162714 gaaaggaaagcaaagcaaag 162733 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 138976 gaaaggaaagcaaagcaaag 138995
>emb|Z49918.1|HSL124H12 Human DNA sequence from clone LA04NC01-124H12 on chromosome 4, complete sequence Length = 30110 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaag 167 |||||||||||||||||||| Sbjct: 9812 gaaaggaaagcaaagcaaag 9831
>dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375b, complete sequence Length = 61653 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ctatcatcatttgctgcggc 232 |||||||||||||||||||| Sbjct: 46119 ctatcatcatttgctgcggc 46100
>dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14P20, TM0087, complete sequence Length = 124300 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ttcttcctggcgaaaggaaa 156 |||||||||||||||||||| Sbjct: 33212 ttcttcctggcgaaaggaaa 33193
>gb|AC171205.1| Mus musculus BAC clone RP23-441H20 from chromosome 16, complete sequence Length = 212822 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 652 aagaaatctccatcatcaga 671 |||||||||||||||||||| Sbjct: 75371 aagaaatctccatcatcaga 75390
>gb|AC171813.2| Mus musculus BAC clone RP23-75G11 from chromosome 1, complete sequence Length = 229986 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gaaaggaaagcaaagcaaagaaggattt 175 |||||||||| |||| |||||||||||| Sbjct: 67373 gaaaggaaaggaaaggaaagaaggattt 67400
>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete sequence Length = 157624 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cagctttgttttcaactatg 133 |||||||||||||||||||| Sbjct: 124060 cagctttgttttcaactatg 124079
>emb|AL929163.5| Mouse DNA sequence from clone RP23-450P9 on chromosome 2, complete sequence Length = 184256 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tgctgctactgctgctgcct 312 |||||||||||||||||||| Sbjct: 99931 tgctgctactgctgctgcct 99950
>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete sequence Length = 250353 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 650 gcaagaaatctccatcatcagaaa 673 ||||||||| |||||||||||||| Sbjct: 162502 gcaagaaatatccatcatcagaaa 162479 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,713,814 Number of Sequences: 3902068 Number of extensions: 6713814 Number of successful extensions: 173742 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 173015 Number of HSP's gapped (non-prelim): 720 length of query: 697 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 674 effective length of database: 17,143,297,704 effective search space: 11554582652496 effective search space used: 11554582652496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
