ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29n22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7... 28 7.4
2UL52_EBV (P03193) Helicase/primase complex protein (Probable DNA... 27 9.7

>CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7.12.1)|
           (CDC-like kinase 1)
          Length = 484

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 22/90 (24%), Positives = 35/90 (38%)
 Frame = -2

Query: 274 ENILSYCEFVVALPCQGSCTKVSTYVRTYDDALHLPCISRMQTYXHAWNICYSFDGSGLL 95
           +N+  YCE         S  +V  ++ T D      C+  ++ + H  +IC  F+  GL 
Sbjct: 194 KNVDRYCE------AARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLS 247

Query: 94  XVCVHFTWGFXAFFFVVIKTCVIXLCWCVN 5
                   GF  F    I+     +C  VN
Sbjct: 248 TYDFIKENGFLPFRLDHIRKMAYQICKSVN 277



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>UL52_EBV (P03193) Helicase/primase complex protein (Probable DNA replication|
           protein BSLF1)
          Length = 874

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 212 SKHVRTYVRRRXALAMHITHANVRTRMEHLLFXRWIGSP 96
           ++H+RTY  R   LA H+    ++ RME      W   P
Sbjct: 312 AEHMRTYFTRETYLAEHVRVQQLKIRMEPPAPYTWDPDP 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,647,300
Number of Sequences: 219361
Number of extensions: 876376
Number of successful extensions: 1728
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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