ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29n20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
2dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
3dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
4gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 313 4e-82
5ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 240 5e-60
6ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 240 5e-60
7dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
8dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
9dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
10gb|AY108197.1| Zea mays PCO065133 mRNA sequence 232 1e-57
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 204 2e-49
12gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 204 2e-49
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
15dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
16dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
17ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 125 2e-25
18dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
19emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 84 6e-13
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
21dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
22gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 68 4e-08
23gb|AY111188.1| Zea mays CL15761_1 mRNA sequence 68 4e-08
24dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
25gb|CP000249.1| Frankia sp. CcI3, complete genome 58 4e-05
26gb|BT016685.1| Zea mays clone Contig518 mRNA sequence 56 1e-04
27emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 56 1e-04
28dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 54 6e-04
29gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin bios... 52 0.002
30gb|AE007214.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 50 0.009
31gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 50 0.009
32gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 50 0.009
33gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 48 0.035
34gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 ... 46 0.14
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.14
36gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.54
37gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.54
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.54
39emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.54
40emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.54
41emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 44 0.54
42dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.54
43ref|XM_364317.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.1
44gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB... 42 2.1
45emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 2.1
46emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal bra... 42 2.1
47gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 42 2.1
48dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.1
49gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 2.1
50gb|U17129.1|RSU17129 Rhodococcus erythropolis ThcA (thcA) gene, ... 42 2.1
51dbj|D14044.1|CUCGLOX Cucurbita cv. Kurokawa Amakuri mRNA for gly... 42 2.1
52ref|NM_183869.1| Oryza sativa (japonica cultivar-group), predic... 40 8.4
53gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 8.4
54gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 8.4
55gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5,... 40 8.4
56gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
57gb|AY690484.1| Bovine herpesvirus 1 strain Abu-Hammad glycoprote... 40 8.4
58gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.4
59gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH... 40 8.4
60gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
61emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.4
62ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc... 40 8.4
63emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 40 8.4
64gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.4
65emb|Z23068.1|BHV12US Bovine herpesvirus type 1 subtype 2 short u... 40 8.4
66emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clon... 40 8.4
67emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.4
68emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.4
69emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in ... 40 8.4
70gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.4
71dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 8.4
72gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 8.4
73gb|AE005993.1| Caulobacter crescentus CB15 section 319 of 359 of... 40 8.4
74gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.4
75gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.4
76dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
77dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
78dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
79gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 8.4
80gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, co... 40 8.4
81dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.4
82dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
83dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
84gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, ... 40 8.4
85emb|Z98199.1|BHVUS12 Bovine herpesvirus 1 genomic US region 40 8.4
86dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
87dbj|AK100992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
88emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 8.4
89gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 8.4
90gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 8.4
91gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 8.4
92gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
93gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
94emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.4
95gb|M59846.1|HSBGIV Bovine herpesvirus type 1 glycoprotein gIV ge... 40 8.4

>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score =  361 bits (182), Expect = 2e-96
 Identities = 233/250 (93%)
 Strand = Plus / Minus

                                                                        
Query: 370  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1162 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1103

                                                                        
Query: 430  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1102 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1043

                                                                        
Query: 490  cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549
            ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 1042 cggcctccccctccgccgccagcgcgaacaccaccggcctcccgatgaagacgccggcgg 983

                                                                        
Query: 550  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 923

                      
Query: 610  ccgggatgcg 619
            ||||||||||
Sbjct: 922  ccgggatgcg 913



to top

>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score =  361 bits (182), Expect = 2e-96
 Identities = 233/250 (93%)
 Strand = Plus / Minus

                                                                        
Query: 370  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1158 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1099

                                                                        
Query: 430  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1098 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1039

                                                                        
Query: 490  cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549
            ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 1038 cggcctccccctccgccgccagcgcgaacaccaccggcctcccgatgaagacgccggcgg 979

                                                                        
Query: 550  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 919

                      
Query: 610  ccgggatgcg 619
            ||||||||||
Sbjct: 918  ccgggatgcg 909



to top

>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score =  361 bits (182), Expect = 2e-96
 Identities = 233/250 (93%)
 Strand = Plus / Minus

                                                                        
Query: 370  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1222 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1163

                                                                        
Query: 430  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1162 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1103

                                                                        
Query: 490  cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549
            ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 1102 cggcctccccctccgccgccagcgcgaacaccaccggcctcccgatgaagacgccggcgg 1043

                                                                        
Query: 550  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 983

                      
Query: 610  ccgggatgcg 619
            ||||||||||
Sbjct: 982  ccgggatgcg 973



to top

>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score =  313 bits (158), Expect = 4e-82
 Identities = 227/250 (90%)
 Strand = Plus / Minus

                                                                        
Query: 370  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
            ||||||| ||| | || ||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1128 cgaggcgttcggcgtccgtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1069

                                                                        
Query: 430  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
            ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 1068 cgctgaacgccatggtgagctcgaactcctcccgcatcatccgcagcaggttcctcaccc 1009

                                                                        
Query: 490  cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549
            ||||||  ||||||||||||||||||||||||||||||  ||| ||||||||||||| ||
Sbjct: 1008 cggccttcccctccgccgccagcgcgaacaccaccggcttcccgatgaagacgccggcgg 949

                                                                        
Query: 550  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948  cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 889

                      
Query: 610  ccgggatgcg 619
            ||||||||||
Sbjct: 888  ccgggatgcg 879



to top

>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score =  240 bits (121), Expect = 5e-60
 Identities = 202/229 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                        
Query: 437  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027

                                                                        
Query: 497  gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556
             ||| |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 1026 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 967

                                                             
Query: 557  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 918



to top

>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score =  240 bits (121), Expect = 5e-60
 Identities = 202/229 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                        
Query: 437  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068

                                                                        
Query: 497  gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556
             ||| |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 1067 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 1008

                                                             
Query: 557  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 959



to top

>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score =  240 bits (121), Expect = 5e-60
 Identities = 202/229 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1445 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1386

                                                                        
Query: 437  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1385 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1326

                                                                        
Query: 497  gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556
             ||| |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 1325 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 1266

                                                             
Query: 557  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 1217



to top

>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score =  240 bits (121), Expect = 5e-60
 Identities = 202/229 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                        
Query: 437  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027

                                                                        
Query: 497  gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556
             ||| |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 1026 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 967

                                                             
Query: 557  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 918



to top

>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score =  240 bits (121), Expect = 5e-60
 Identities = 202/229 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                        
Query: 437  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068

                                                                        
Query: 497  gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556
             ||| |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 1067 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 1008

                                                             
Query: 557  ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 959



to top

>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score =  232 bits (117), Expect = 1e-57
 Identities = 195/221 (88%)
 Strand = Plus / Minus

                                                                        
Query: 383  ctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgagcgccat 442
            |||||||| |||||| | ||||||||| |||  |||   |||||| |||| |||||||||
Sbjct: 1288 ctcggtgatgatgtgcttgcgggtgatttcggcgagggaggtgcagccgctgagcgccat 1229

                                                                        
Query: 443  ggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctcgccctc 502
            ||||||||||||||| ||||||| ||||||||| |||||   |||||||||||||||| |
Sbjct: 1228 ggtgagctcgaactcgtcccgcagcatgcgcaggacgttggacacgccggcctcgcccgc 1169

                                                                        
Query: 503  cgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgagggcgag 562
            ||||||||| | |||||||||||||| ||| | ||| ||||||| ||||||||| |||||
Sbjct: 1168 cgccgccagggagaacaccaccggcctcccgacgaatacgccggcggcgccgagcgcgag 1109

                                                     
Query: 563  cgccttgaagacgtcggtgccgcggcggacgccgccgtcga 603
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 cgccttgaagacgtcggtgccgcggcggacgccgccgtcga 1068



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                            
Query: 370      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32328144 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32328085

                                                                            
Query: 430      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 32328084 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32328025

                                                       
Query: 490      cggcctcgccctccgccgccagcgcgaacaccaccggcc 528
                ||||||| |||||||||||||||||||||||||||||||
Sbjct: 32328024 cggcctccccctccgccgccagcgcgaacaccaccggcc 32327986



 Score =  159 bits (80), Expect = 1e-35
 Identities = 83/84 (98%)
 Strand = Plus / Minus

                                                                            
Query: 536      gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32327888 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 32327829

                                        
Query: 596      gccgtcgaggtacaccgggatgcg 619
                ||||||||||||||||||||||||
Sbjct: 32327828 gccgtcgaggtacaccgggatgcg 32327805



to top

>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                         
Query: 370   cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
             ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 61911 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 61852

                                                                         
Query: 430   cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
             ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 61851 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 61792

                                                    
Query: 490   cggcctcgccctccgccgccagcgcgaacaccaccggcc 528
             ||||||| |||||||||||||||||||||||||||||||
Sbjct: 61791 cggcctccccctccgccgccagcgcgaacaccaccggcc 61753



 Score =  159 bits (80), Expect = 1e-35
 Identities = 83/84 (98%)
 Strand = Plus / Minus

                                                                         
Query: 536   gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61655 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 61596

                                     
Query: 596   gccgtcgaggtacaccgggatgcg 619
             ||||||||||||||||||||||||
Sbjct: 61595 gccgtcgaggtacaccgggatgcg 61572



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                            
Query: 370      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32418654 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32418595

                                                                            
Query: 430      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 32418594 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32418535

                                                       
Query: 490      cggcctcgccctccgccgccagcgcgaacaccaccggcc 528
                ||||||| |||||||||||||||||||||||||||||||
Sbjct: 32418534 cggcctccccctccgccgccagcgcgaacaccaccggcc 32418496



 Score =  159 bits (80), Expect = 1e-35
 Identities = 83/84 (98%)
 Strand = Plus / Minus

                                                                            
Query: 536      gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32418398 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 32418339

                                        
Query: 596      gccgtcgaggtacaccgggatgcg 619
                ||||||||||||||||||||||||
Sbjct: 32418338 gccgtcgaggtacaccgggatgcg 32418315



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  131 bits (66), Expect = 3e-27
 Identities = 69/70 (98%)
 Strand = Plus / Minus

                                                                           
Query: 536     gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2832941 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 2832882

                         
Query: 596     gccgtcgagg 605
               ||||||||||
Sbjct: 2832881 gccgtcgagg 2832872



 Score =  111 bits (56), Expect = 3e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                           
Query: 377     gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
               |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 2833181 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 2833122

                                                                           
Query: 437     cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
               ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 2833121 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 2833062

                                               
Query: 497     gccctccgccgccagcgcgaacaccaccggcc 528
                ||| |||||||||||| ||||||||||||||
Sbjct: 2833061 ccccgccgccgccagcgagaacaccaccggcc 2833030



to top

>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score =  131 bits (66), Expect = 3e-27
 Identities = 69/70 (98%)
 Strand = Plus / Minus

                                                                          
Query: 536    gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136502 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 136443

                        
Query: 596    gccgtcgagg 605
              ||||||||||
Sbjct: 136442 gccgtcgagg 136433



 Score =  111 bits (56), Expect = 3e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                          
Query: 377    gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
              |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 136742 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 136683

                                                                          
Query: 437    cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
              ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 136682 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 136623

                                              
Query: 497    gccctccgccgccagcgcgaacaccaccggcc 528
               ||| |||||||||||| ||||||||||||||
Sbjct: 136622 ccccgccgccgccagcgagaacaccaccggcc 136591



to top

>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score =  131 bits (66), Expect = 3e-27
 Identities = 69/70 (98%)
 Strand = Plus / Minus

                                                                        
Query: 536  gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 3169

                      
Query: 596  gccgtcgagg 605
            ||||||||||
Sbjct: 3168 gccgtcgagg 3159



 Score =  111 bits (56), Expect = 3e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 3468 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 3409

                                                                        
Query: 437  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 3408 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 3349

                                            
Query: 497  gccctccgccgccagcgcgaacaccaccggcc 528
             ||| |||||||||||| ||||||||||||||
Sbjct: 3348 ccccgccgccgccagcgagaacaccaccggcc 3317



to top

>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score =  125 bits (63), Expect = 2e-25
 Identities = 159/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 423  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1034 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 975

                                                                        
Query: 483  ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacg 542
            ||||||||||||||||| ||| | ||||||| ||||| ||||||||  ||||| || || 
Sbjct: 974  ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcctgccaataaatact 915

                                                                        
Query: 543  ccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcg 602
            || || || || || || || |||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 914  cctgaagctcccagcgccagggccttgaacacgtccgtgccacggcggacgccgccgtcg 855

                       
Query: 603  aggtacaccgg 613
            ||| |||||||
Sbjct: 854  aggaacaccgg 844



to top

>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score =  125 bits (63), Expect = 2e-25
 Identities = 159/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 423  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1103 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1044

                                                                        
Query: 483  ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacg 542
            ||||||||||||||||| ||| | ||||||| ||||| ||||||||  ||||| || || 
Sbjct: 1043 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcctgccaataaatact 984

                                                                        
Query: 543  ccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcg 602
            || || || || || || || |||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 983  cctgaagctcccagcgccagggccttgaacacgtccgtgccacggcggacgccgccgtcg 924

                       
Query: 603  aggtacaccgg 613
            ||| |||||||
Sbjct: 923  aggaacaccgg 913



to top

>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                         
Query: 423   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
             ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 59360 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 59301

                                                           
Query: 483   ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggcc 528
             ||||||||||||||||| ||| | ||||||| ||||| ||||||||
Sbjct: 59300 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcc 59255



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 564   gccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacaccgg 613
             |||||||| ||||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 59124 gccttgaacacgtccgtgccacggcggacgccgccgtcgaggaacaccgg 59075



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 423   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
             ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 63428 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 63369

                              
Query: 483   ctcacgccggcctcgcc 499
             |||||||||||||||||
Sbjct: 63368 ctcacgccggcctcgcc 63352



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 564   gccttgaagacgtcggtgccgcggcg 589
             |||||||| |||||||||||||||||
Sbjct: 63198 gccttgaacacgtcggtgccgcggcg 63173



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                            
Query: 423      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
                ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 31726090 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 31726031

                                                              
Query: 483      ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggcc 528
                ||||||||||||||||| ||| | ||||||| ||||| ||||||||
Sbjct: 31726030 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcc 31725985



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 564      gccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacaccgg 613
                |||||||| ||||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 31725854 gccttgaacacgtccgtgccacggcggacgccgccgtcgaggaacaccgg 31725805



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 423      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
                ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 31730158 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 31730099

                                 
Query: 483      ctcacgccggcctcgcc 499
                |||||||||||||||||
Sbjct: 31730098 ctcacgccggcctcgcc 31730082



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 564      gccttgaagacgtcggtgccgcggcg 589
                |||||||| |||||||||||||||||
Sbjct: 31729928 gccttgaacacgtcggtgccgcggcg 31729903



to top

>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                        
Query: 423  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1107 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1048

                                                          
Query: 483  ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggcc 528
            ||||||||||||||||| ||| | ||||||| ||||| ||||||||
Sbjct: 1047 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcc 1002



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 564 gccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacaccgg 613
           |||||||| ||||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 972 gccttgaacacgtccgtgccacggcggacgccgccgtcgaggaacaccgg 923



to top

>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 438  gccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctcg 497
            ||||||||||||||||||||||| || | |||  | ||||| |||||||| || ||||| 
Sbjct: 1115 gccatggtgagctcgaactcctcgcggagcatttgaagcaccttcctcacaccagcctca 1056

                                                  
Query: 498  ccctccgccgccagcgcgaacaccaccggccgcccaat 535
            || ||||| ||||  | |||||||||||||| ||||||
Sbjct: 1055 ccttccgcagccaaagagaacaccaccggcctcccaat 1018



to top

>gb|AY111188.1| Zea mays CL15761_1 mRNA sequence
          Length = 651

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 548 ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtc 601
           ||||||||| || |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 376 ggcgccgagcgccagcgccttcaacacgtcggtgccgcgccggacgccgccgtc 429



to top

>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full
            insert sequence
          Length = 1986

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482
            ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 1621 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 1562

                             
Query: 483  ctcacgccggcctcgcc 499
            |||||||||||||||||
Sbjct: 1561 ctcacgccggcctcgcc 1545



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                           
Query: 548     ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggta 607
               |||||||||||| ||||||||||  |||||| |||| || ||||| || ||||||||| |
Sbjct: 2791356 ggcgccgagggccagcgccttgaccacgtcgttgcctcgccggacacctccgtcgaggaa 2791297

                    
Query: 608     caccg 612
               |||||
Sbjct: 2791296 caccg 2791292



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 581     gccgcggcggacgccgccgt 600
               ||||||||||||||||||||
Sbjct: 1299673 gccgcggcggacgccgccgt 1299654



to top

>gb|BT016685.1| Zea mays clone Contig518 mRNA sequence
          Length = 1395

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 139/176 (78%)
 Strand = Plus / Minus

                                                                        
Query: 435  agcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcc 494
            ||||||||||||| ||||| ||| |||| || ||| |||||| | |||||||| || |||
Sbjct: 1079 agcgccatggtgatctcgagctcatccctcagcatccgcagcgcattcctcacccctgcc 1020

                                                                        
Query: 495  tcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccg 554
              ||| ||| | || || |||||||  || ||||  ||||| || || || ||||| || 
Sbjct: 1019 ctgccgtccacggcgagggcgaacagtacgggccttccaataaacactcctgaggctccc 960

                                                                    
Query: 555  agggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacac 610
            || || |  |||||||| ||||| ||||| ||||||| ||||||||||||| ||||
Sbjct: 959  agcgccaaggccttgaacacgtcagtgccacggcggatgccgccgtcgaggaacac 904



to top

>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 548    ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcga 603
              ||||||||| |||||||||||||||||||||  ||||  |||||| |||| |||||
Sbjct: 218011 ggcgccgagcgcgagcgccttgaagacgtcgtcgccggtgcggacaccgctgtcga 217956



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 558     gcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604
               |||| ||||||||  |||||| |||||||||||| ||||||||||||
Sbjct: 3411357 gcgaccgccttgaccacgtcgctgccgcggcggatgccgccgtcgag 3411403



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 360    agcgggcgtccgaggcggtcgc 381
              ||||||||||||||||||||||
Sbjct: 277779 agcgggcgtccgaggcggtcgc 277800



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 564     gccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604
               |||||||  |||||| ||||||| || ||||||||||||||
Sbjct: 2410319 gccttgaccacgtcgctgccgcgccgcacgccgccgtcgag 2410359



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     ctcggcagcgggcgtccgag 373
               ||||||||||||||||||||
Sbjct: 5814716 ctcggcagcgggcgtccgag 5814697



to top

>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster,
             complete sequence
          Length = 55972

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 552   ccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtc 601
             ||||||||||| ||||||| |||||| ||||||| ||| || ||||||||
Sbjct: 44018 ccgagggcgagggccttgaggacgtccgtgccgctgcgcacaccgccgtc 44067



to top

>gb|AE007214.1| Sinorhizobium meliloti 1021 plasmid pSymA section 20 of 121 of the
             complete plasmid sequence
          Length = 12359

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 549   gcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtc 601
             |||||||| |||| |||||||| |||||| | |||||||||||  ||||||||
Sbjct: 11984 gcgccgagtgcgatcgccttgatgacgtccgcgccgcggcggataccgccgtc 11932



to top

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 548    ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604
              ||||||||| || |||||||||||||| |||  |||||| ||||  |||||||||||
Sbjct: 785003 ggcgccgagcgccagcgccttgaagacatcgccgccgcgccggatcccgccgtcgag 784947



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 552     ccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604
               ||||| |||||||| |||| ||| |||||||||||   |||||||||||||||
Sbjct: 1044207 ccgagtgcgagcgctttgaggacatcggtgccgcgcgtgacgccgccgtcgag 1044155



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 548     ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcgga 591
               |||||| || ||||||||||||| |||||||| ||||| |||||
Sbjct: 3292386 ggcgcccagcgcgagcgccttgacgacgtcggcgccgctgcgga 3292429



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 505     ccgccagcgcgaacaccaccg 525
               |||||||||||||||||||||
Sbjct: 3258324 ccgccagcgcgaacaccaccg 3258304



to top

>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster
             A47934, complete sequence
          Length = 69301

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 543   ccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgc 597
             ||||| || ||||| ||||||||| |||  ||||||||||||| ||||| |||||
Sbjct: 58415 ccggacgccccgagagcgagcgccctgagcacgtcggtgccgctgcggatgccgc 58361



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 583     cgcggcggacgccgccgtcgagg 605
               |||||||||||||||||||||||
Sbjct: 8520622 cgcggcggacgccgccgtcgagg 8520600



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 549     gcgccgagggcgagcgccttgaagacgtcg 578
               |||||||| |||||||||||||||| ||||
Sbjct: 8916298 gcgccgagcgcgagcgccttgaagatgtcg 8916327



to top

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 541    cgccggaggcgccgagggcgag 562
              ||||||||||||||||||||||
Sbjct: 337020 cgccggaggcgccgagggcgag 337041



to top

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 503    cgccgccagcgcgaacaccaccggcc 528
              |||||||||||||| |||||||||||
Sbjct: 940057 cgccgccagcgcgaccaccaccggcc 940082



to top

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 585     cggcggacgccgccgtcgaggt 606
               ||||||||||||||||||||||
Sbjct: 3391080 cggcggacgccgccgtcgaggt 3391101



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 573     acgtcggtgccgcggcggacgccg 596
               ||||||||||||||||||| ||||
Sbjct: 1793702 acgtcggtgccgcggcggatgccg 1793679



to top

>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 541    cgccggaggcgccgagggcgag 562
              ||||||||||||||||||||||
Sbjct: 336925 cgccggaggcgccgagggcgag 336946



to top

>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 541    cgccggaggcgccgagggcgag 562
              ||||||||||||||||||||||
Sbjct: 337945 cgccggaggcgccgagggcgag 337966



to top

>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 572    gacgtcggtgccgcggcggacgccgccgtcgagg 605
              |||||||| ||||  |||||||||||||||||||
Sbjct: 192732 gacgtcggcgccggtgcggacgccgccgtcgagg 192765



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 558     gcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcga 603
               |||| |||||||| || |||||||||||||| || |||||| ||||
Sbjct: 5346101 gcgatcgccttgacgatgtcggtgccgcggccgaagccgccatcga 5346056



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 573     acgtcggtgccgcggcggacgccg 596
               ||||||||||||||||||| ||||
Sbjct: 6536967 acgtcggtgccgcggcggatgccg 6536990



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 491     ggcctcgccctccgccgcca 510
               ||||||||||||||||||||
Sbjct: 1654023 ggcctcgccctccgccgcca 1654004



to top

>ref|XM_364317.1| Magnaporthe grisea 70-15 hypothetical protein (MG09162.4) partial
           mRNA
          Length = 1152

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 574 cgtcggtgccgcggcggacgccgccgtcg 602
           |||||||||||  ||||||||||||||||
Sbjct: 943 cgtcggtgccgtagcggacgccgccgtcg 915



to top

>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
             (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
             (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
             genes, complete cds; insertion sequence IS6100A, complete
             sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
             cds; insertion sequence IS6100B, complete sequence; LinC
             (linC) gene, complete cds; insertion sequence IS6100C,
             complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
             (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
             (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
             (orfX), and ORFY (orfY) genes, complete cds
          Length = 41034

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 492   gcctcgccctccgccgccagc 512
             |||||||||||||||||||||
Sbjct: 34679 gcctcgccctccgccgccagc 34659



to top

>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 586     ggcggacgccgccgtcgaggt 606
               |||||||||||||||||||||
Sbjct: 1965998 ggcggacgccgccgtcgaggt 1966018



to top

>emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal brain of Homo sapiens
           (human)
          Length = 1491

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 492 gcctcgccctccgccgccagc 512
           |||||||||||||||||||||
Sbjct: 590 gcctcgccctccgccgccagc 610



to top

>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 492    gcctcgccctccgccgccagc 512
              |||||||||||||||||||||
Sbjct: 136003 gcctcgccctccgccgccagc 135983



to top

>dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830210F09 product:weakly similar to
            Putative L-lactate dehydrogenase (EC 1.1.2.3) [Bordetella
            parapertussis], full insert sequence
          Length = 7735

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 573  acgtcggtgccgcggcggacgccgc 597
            ||||||||||||||||||| |||||
Sbjct: 7234 acgtcggtgccgcggcggaagccgc 7210



to top

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 451     cgaactcctcccgcatcatgcgcag 475
               |||| ||||||||||||||||||||
Sbjct: 2682575 cgaaatcctcccgcatcatgcgcag 2682551



to top

>gb|U17129.1|RSU17129 Rhodococcus erythropolis ThcA (thcA) gene, complete cds; and unknown
            genes
          Length = 17425

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 552  ccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604
            ||||| || |||||||||| |||||||  |||||| || | ||||||||||||
Sbjct: 4086 ccgagtgctagcgccttgacgacgtcgccgccgcgtcgaatgccgccgtcgag 4034



to top

>dbj|D14044.1|CUCGLOX Cucurbita cv. Kurokawa Amakuri mRNA for glycolate oxidase, complete
            cds
          Length = 1381

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 480  ttcctcacgccggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaag 539
            |||||||| || ||||||||||| || ||||  | ||||||||| |||| |||||| || 
Sbjct: 1067 ttcctcacaccagcctcgccctctgctgccaaagagaacaccactggcctcccaataaat 1008

                             
Query: 540  acgccggaggcgccgag 556
            | ||| || ||||||||
Sbjct: 1007 atgccagatgcgccgag 991



to top

>ref|NM_183869.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 512 cgcgaacaccaccggccgcc 531
           ||||||||||||||||||||
Sbjct: 162 cgcgaacaccaccggccgcc 143



to top

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 491     ggcctcgccctccgccgcca 510
               ||||||||||||||||||||
Sbjct: 2892758 ggcctcgccctccgccgcca 2892777



to top

>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 497     gccctccgccgccagcgcga 516
               ||||||||||||||||||||
Sbjct: 1499835 gccctccgccgccagcgcga 1499854



to top

>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence
          Length = 148711

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   gccctccgccgccagcgcga 516
             ||||||||||||||||||||
Sbjct: 74047 gccctccgccgccagcgcga 74066



to top

>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 99    ggtgcgaaatatggtggaaatggcgaga 126
             |||||||||| |||||||||||| ||||
Sbjct: 29983 ggtgcgaaatttggtggaaatggagaga 29956



to top

>gb|AY690484.1| Bovine herpesvirus 1 strain Abu-Hammad glycoprotein D gene, partial
           cds
          Length = 1089

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 544 cggaggcgccgagggcgagc 563
           ||||||||||||||||||||
Sbjct: 966 cggaggcgccgagggcgagc 985



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 538     agacgccggaggcgccgagggcga 561
               ||||||||||||||||||| ||||
Sbjct: 1610822 agacgccggaggcgccgagcgcga 1610799



to top

>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 392  gatgtgttcgcgggtgatgtcgctgagc 419
            |||||| ||||||||| |||||||||||
Sbjct: 1051 gatgtgctcgcgggtggtgtcgctgagc 1024



to top

>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 99     ggtgcgaaatatggtggaaatggcgaga 126
              |||||||||| |||||||||||| ||||
Sbjct: 158442 ggtgcgaaatttggtggaaatggagaga 158415



to top

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 392    gatgtgttcgcgggtgatgtcgctgagc 419
              |||||| ||||||||| |||||||||||
Sbjct: 766325 gatgtgctcgcgggtggtgtcgctgagc 766298



to top

>ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc70-interacting
           protein (Tb927.3.5340) partial mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 497 gccctccgccgccagcgcga 516
           ||||||||||||||||||||
Sbjct: 700 gccctccgccgccagcgcga 719



to top

>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 544    cggaggcgccgagggcgagc 563
              ||||||||||||||||||||
Sbjct: 119849 cggaggcgccgagggcgagc 119868



to top

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ccgccgccagcgcgaacacc 521
             ||||||||||||||||||||
Sbjct: 67982 ccgccgccagcgcgaacacc 68001



to top

>emb|Z23068.1|BHV12US Bovine herpesvirus type 1 subtype 2 short unique region DNA
          Length = 10066

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  cggaggcgccgagggcgagc 563
            ||||||||||||||||||||
Sbjct: 5786 cggaggcgccgagggcgagc 5805



to top

>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15
          Length = 63598

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   gtgcgttgcgttgcgttgcg 268
             ||||||||||||||||||||
Sbjct: 42541 gtgcgttgcgttgcgttgcg 42560



to top

>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 573  acgtcggtgccgcggcggacgccg 596
            ||||||||||||||||||| ||||
Sbjct: 6512 acgtcggtgccgcggcggatgccg 6535



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 538     agacgccggaggcgccgagggcga 561
               ||||||||||||||||||| ||||
Sbjct: 1497923 agacgccggaggcgccgagcgcga 1497900



to top

>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete
              sequence
          Length = 186135

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     acatggaaatacaatatggt 92
              ||||||||||||||||||||
Sbjct: 166707 acatggaaatacaatatggt 166688



to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 573     acgtcggtgccgcggcggacgccg 596
               ||||||||||||||||||| ||||
Sbjct: 4614562 acgtcggtgccgcggcggatgccg 4614585



to top

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 392     gatgtgttcgcgggtgatgtcgctgagc 419
               |||||| ||||||||| |||||||||||
Sbjct: 4277328 gatgtgctcgcgggtggtgtcgctgagc 4277355



to top

>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   gtgcgttgcgttgcgttgcg 268
             ||||||||||||||||||||
Sbjct: 26559 gtgcgttgcgttgcgttgcg 26540



to top

>gb|AE005993.1| Caulobacter crescentus CB15 section 319 of 359 of the complete genome
          Length = 10121

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 561  agcgccttgaagacgtcggtgccg 584
            ||||||||||||||| ||||||||
Sbjct: 2439 agcgccttgaagacgccggtgccg 2462



to top

>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306,  section 68 of 469 of the
            complete genome
          Length = 11141

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 392  gatgtgttcgcgggtgatgtcgctgagc 419
            |||||| ||||||||| |||||||||||
Sbjct: 3644 gatgtgctcgcgggtggtgtcgctgagc 3617



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 484     tcacgccggcctcgccctccgccgccagcgcg 515
               |||||||||||||| |||||||| || |||||
Sbjct: 1830555 tcacgccggcctcggcctccgcctccggcgcg 1830586



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 573     acgtcggtgccgcggcggacgccg 596
               ||||||||||||||||||| ||||
Sbjct: 1791289 acgtcggtgccgcggcggatgccg 1791266



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 23       atgtatgataaatacagaat 42
                ||||||||||||||||||||
Sbjct: 22849581 atgtatgataaatacagaat 22849562



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 99       ggtgcgaaatatggtggaaatggcgaga 126
                |||||||||| |||||||||||| ||||
Sbjct: 17868791 ggtgcgaaatttggtggaaatggagaga 17868764



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 512      cgcgaacaccaccggccgcc 531
                ||||||||||||||||||||
Sbjct: 12787771 cgcgaacaccaccggccgcc 12787752



to top

>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
             BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   gtgcgttgcgttgcgttgcg 268
             ||||||||||||||||||||
Sbjct: 77465 gtgcgttgcgttgcgttgcg 77484



to top

>gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, complete sequence
          Length = 175020

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 487   cgccggcctcgccctccgccgcca 510
             |||||||| |||||||||||||||
Sbjct: 90904 cgccggccccgccctccgccgcca 90881



to top

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 506     cgccagcgcgaacaccaccggccg 529
               |||||||||||||| |||||||||
Sbjct: 1569835 cgccagcgcgaacagcaccggccg 1569858



to top

>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489E06
          Length = 140229

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   cgcgaacaccaccggccgcc 531
             ||||||||||||||||||||
Sbjct: 68170 cgcgaacaccaccggccgcc 68151



to top

>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0554D10
          Length = 158723

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    cgcgaacaccaccggccgcc 531
              ||||||||||||||||||||
Sbjct: 154800 cgcgaacaccaccggccgcc 154781



to top

>gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, partial cds
          Length = 1036

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 488 gccggcctcgccctccgccgccag 511
           |||| |||||||||||||||||||
Sbjct: 744 gccgccctcgccctccgccgccag 721



to top

>emb|Z98199.1|BHVUS12 Bovine herpesvirus 1 genomic US region
          Length = 8599

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  cggaggcgccgagggcgagc 563
            ||||||||||||||||||||
Sbjct: 5615 cggaggcgccgagggcgagc 5634



to top

>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full
           insert sequence
          Length = 2833

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 gtgcgttgcgttgcgttgcg 268
           ||||||||||||||||||||
Sbjct: 859 gtgcgttgcgttgcgttgcg 878



to top

>dbj|AK100992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146F09, full
           insert sequence
          Length = 1581

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 512 cgcgaacaccaccggccgcc 531
           ||||||||||||||||||||
Sbjct: 315 cgcgaacaccaccggccgcc 296



to top

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 508     ccagcgcgaacaccaccggc 527
               ||||||||||||||||||||
Sbjct: 2409172 ccagcgcgaacaccaccggc 2409191



to top

>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the
            complete sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  gtgcgttgcgttgcgttgcg 268
            ||||||||||||||||||||
Sbjct: 5027 gtgcgttgcgttgcgttgcg 5008



to top

>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    gtgcgttgcgttgcgttgcg 268
              ||||||||||||||||||||
Sbjct: 111005 gtgcgttgcgttgcgttgcg 111024



to top

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 392     gatgtgttcgcgggtgatgtcgctgagc 419
               |||||| ||||||||| |||||||||||
Sbjct: 4284118 gatgtgctcgcgggtggtgtcgctgagc 4284145



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 99       ggtgcgaaatatggtggaaatggcgaga 126
                |||||||||| |||||||||||| ||||
Sbjct: 17963108 ggtgcgaaatttggtggaaatggagaga 17963081



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 23       atgtatgataaatacagaat 42
                ||||||||||||||||||||
Sbjct: 22777772 atgtatgataaatacagaat 22777753



to top

>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     atgtatgataaatacagaat 42
              ||||||||||||||||||||
Sbjct: 107263 atgtatgataaatacagaat 107282



to top

>gb|M59846.1|HSBGIV Bovine herpesvirus type 1 glycoprotein gIV gene, complete cds
          Length = 1405

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  cggaggcgccgagggcgagc 563
            ||||||||||||||||||||
Sbjct: 1038 cggaggcgccgagggcgagc 1057


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,540,038
Number of Sequences: 3902068
Number of extensions: 3540038
Number of successful extensions: 70824
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66646
Number of HSP's gapped (non-prelim): 4157
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top