| Clone Name | rbaal29n20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full insert sequence Length = 1526 Score = 361 bits (182), Expect = 2e-96 Identities = 233/250 (93%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||||||| | |||||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 1162 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1103 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1102 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1043 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549 ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 1042 cggcctccccctccgccgccagcgcgaacaccaccggcctcccgatgaagacgccggcgg 983 Query: 550 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 923 Query: 610 ccgggatgcg 619 |||||||||| Sbjct: 922 ccgggatgcg 913
>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full insert sequence Length = 1522 Score = 361 bits (182), Expect = 2e-96 Identities = 233/250 (93%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||||||| | |||||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 1158 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1099 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1098 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1039 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549 ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 1038 cggcctccccctccgccgccagcgcgaacaccaccggcctcccgatgaagacgccggcgg 979 Query: 550 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 919 Query: 610 ccgggatgcg 619 |||||||||| Sbjct: 918 ccgggatgcg 909
>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full insert sequence Length = 1586 Score = 361 bits (182), Expect = 2e-96 Identities = 233/250 (93%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||||||| | |||||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 1222 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1163 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1162 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1103 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549 ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 1102 cggcctccccctccgccgccagcgcgaacaccaccggcctcccgatgaagacgccggcgg 1043 Query: 550 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 983 Query: 610 ccgggatgcg 619 |||||||||| Sbjct: 982 ccgggatgcg 973
>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds Length = 1473 Score = 313 bits (158), Expect = 4e-82 Identities = 227/250 (90%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||| ||| | || ||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 1128 cgaggcgttcggcgtccgtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1069 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct: 1068 cgctgaacgccatggtgagctcgaactcctcccgcatcatccgcagcaggttcctcaccc 1009 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggagg 549 |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 1008 cggccttcccctccgccgccagcgcgaacaccaccggcttcccgatgaagacgccggcgg 949 Query: 550 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 948 cgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtaca 889 Query: 610 ccgggatgcg 619 |||||||||| Sbjct: 888 ccgggatgcg 879
>ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027 Query: 497 gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556 ||| |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1026 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 967 Query: 557 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 918
>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA Length = 1501 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068 Query: 497 gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556 ||| |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1067 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 1008 Query: 557 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 959
>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full insert sequence Length = 1738 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 1445 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1386 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 1385 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1326 Query: 497 gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556 ||| |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1325 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 1266 Query: 557 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 1217
>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full insert sequence Length = 1439 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027 Query: 497 gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556 ||| |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1026 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 967 Query: 557 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 918
>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full insert sequence Length = 1501 Score = 240 bits (121), Expect = 5e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068 Query: 497 gccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgag 556 ||| |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1067 ccccgccgccgccagcgagaacaccaccggcctcccgatgaagacgccggcggcgccgag 1008 Query: 557 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 605 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 ggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgagg 959
>gb|AY108197.1| Zea mays PCO065133 mRNA sequence Length = 1667 Score = 232 bits (117), Expect = 1e-57 Identities = 195/221 (88%) Strand = Plus / Minus Query: 383 ctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgagcgccat 442 |||||||| |||||| | ||||||||| ||| ||| |||||| |||| ||||||||| Sbjct: 1288 ctcggtgatgatgtgcttgcgggtgatttcggcgagggaggtgcagccgctgagcgccat 1229 Query: 443 ggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctcgccctc 502 ||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||| | Sbjct: 1228 ggtgagctcgaactcgtcccgcagcatgcgcaggacgttggacacgccggcctcgcccgc 1169 Query: 503 cgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccgagggcgag 562 ||||||||| | |||||||||||||| ||| | ||| ||||||| ||||||||| ||||| Sbjct: 1168 cgccgccagggagaacaccaccggcctcccgacgaatacgccggcggcgccgagcgcgag 1109 Query: 563 cgccttgaagacgtcggtgccgcggcggacgccgccgtcga 603 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 cgccttgaagacgtcggtgccgcggcggacgccgccgtcga 1068
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||||||| | |||||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 32328144 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32328085 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 32328084 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32328025 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggcc 528 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 32328024 cggcctccccctccgccgccagcgcgaacaccaccggcc 32327986 Score = 159 bits (80), Expect = 1e-35 Identities = 83/84 (98%) Strand = Plus / Minus Query: 536 gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32327888 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 32327829 Query: 596 gccgtcgaggtacaccgggatgcg 619 |||||||||||||||||||||||| Sbjct: 32327828 gccgtcgaggtacaccgggatgcg 32327805
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||||||| | |||||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 61911 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 61852 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 61851 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 61792 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggcc 528 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 61791 cggcctccccctccgccgccagcgcgaacaccaccggcc 61753 Score = 159 bits (80), Expect = 1e-35 Identities = 83/84 (98%) Strand = Plus / Minus Query: 536 gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61655 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 61596 Query: 596 gccgtcgaggtacaccgggatgcg 619 |||||||||||||||||||||||| Sbjct: 61595 gccgtcgaggtacaccgggatgcg 61572
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Minus Query: 370 cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 429 ||||||||||| | |||||| ||||||| |||||||||||||| |||| |||||| | Sbjct: 32418654 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32418595 Query: 430 cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 489 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 32418594 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32418535 Query: 490 cggcctcgccctccgccgccagcgcgaacaccaccggcc 528 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 32418534 cggcctccccctccgccgccagcgcgaacaccaccggcc 32418496 Score = 159 bits (80), Expect = 1e-35 Identities = 83/84 (98%) Strand = Plus / Minus Query: 536 gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32418398 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 32418339 Query: 596 gccgtcgaggtacaccgggatgcg 619 |||||||||||||||||||||||| Sbjct: 32418338 gccgtcgaggtacaccgggatgcg 32418315
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 536 gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2832941 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 2832882 Query: 596 gccgtcgagg 605 |||||||||| Sbjct: 2832881 gccgtcgagg 2832872 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 2833181 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 2833122 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 2833121 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 2833062 Query: 497 gccctccgccgccagcgcgaacaccaccggcc 528 ||| |||||||||||| |||||||||||||| Sbjct: 2833061 ccccgccgccgccagcgagaacaccaccggcc 2833030
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 536 gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136502 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 136443 Query: 596 gccgtcgagg 605 |||||||||| Sbjct: 136442 gccgtcgagg 136433 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 136742 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 136683 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 136682 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 136623 Query: 497 gccctccgccgccagcgcgaacaccaccggcc 528 ||| |||||||||||| |||||||||||||| Sbjct: 136622 ccccgccgccgccagcgagaacaccaccggcc 136591
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 536 gaagacgccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 595 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3228 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 3169 Query: 596 gccgtcgagg 605 |||||||||| Sbjct: 3168 gccgtcgagg 3159 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 377 gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 436 |||| ||||||||| || ||| | ||||||||||||| ||| |||||| |||| ||| Sbjct: 3468 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 3409 Query: 437 cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 496 ||||||||||||||||||||| || || | ||| |||||||||||| || |||||||| Sbjct: 3408 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 3349 Query: 497 gccctccgccgccagcgcgaacaccaccggcc 528 ||| |||||||||||| |||||||||||||| Sbjct: 3348 ccccgccgccgccagcgagaacaccaccggcc 3317
>ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 125 bits (63), Expect = 2e-25 Identities = 159/191 (83%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||||||| | ||| || || | ||| ||||||| ||| Sbjct: 1034 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 975 Query: 483 ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacg 542 ||||||||||||||||| ||| | ||||||| ||||| |||||||| ||||| || || Sbjct: 974 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcctgccaataaatact 915 Query: 543 ccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcg 602 || || || || || || || |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 914 cctgaagctcccagcgccagggccttgaacacgtccgtgccacggcggacgccgccgtcg 855 Query: 603 aggtacaccgg 613 ||| ||||||| Sbjct: 854 aggaacaccgg 844
>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full insert sequence Length = 1435 Score = 125 bits (63), Expect = 2e-25 Identities = 159/191 (83%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||||||| | ||| || || | ||| ||||||| ||| Sbjct: 1103 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1044 Query: 483 ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacg 542 ||||||||||||||||| ||| | ||||||| ||||| |||||||| ||||| || || Sbjct: 1043 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcctgccaataaatact 984 Query: 543 ccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcg 602 || || || || || || || |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 983 cctgaagctcccagcgccagggccttgaacacgtccgtgccacggcggacgccgccgtcg 924 Query: 603 aggtacaccgg 613 ||| ||||||| Sbjct: 923 aggaacaccgg 913
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||||||| | ||| || || | ||| ||||||| ||| Sbjct: 59360 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 59301 Query: 483 ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggcc 528 ||||||||||||||||| ||| | ||||||| ||||| |||||||| Sbjct: 59300 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcc 59255 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 564 gccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacaccgg 613 |||||||| ||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 59124 gccttgaacacgtccgtgccacggcggacgccgccgtcgaggaacaccgg 59075 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| ||||| Sbjct: 63428 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 63369 Query: 483 ctcacgccggcctcgcc 499 ||||||||||||||||| Sbjct: 63368 ctcacgccggcctcgcc 63352 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 564 gccttgaagacgtcggtgccgcggcg 589 |||||||| ||||||||||||||||| Sbjct: 63198 gccttgaacacgtcggtgccgcggcg 63173
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||||||| | ||| || || | ||| ||||||| ||| Sbjct: 31726090 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 31726031 Query: 483 ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggcc 528 ||||||||||||||||| ||| | ||||||| ||||| |||||||| Sbjct: 31726030 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcc 31725985 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 564 gccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacaccgg 613 |||||||| ||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 31725854 gccttgaacacgtccgtgccacggcggacgccgccgtcgaggaacaccgg 31725805 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| ||||| Sbjct: 31730158 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 31730099 Query: 483 ctcacgccggcctcgcc 499 ||||||||||||||||| Sbjct: 31730098 ctcacgccggcctcgcc 31730082 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 564 gccttgaagacgtcggtgccgcggcg 589 |||||||| ||||||||||||||||| Sbjct: 31729928 gccttgaacacgtcggtgccgcggcg 31729903
>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full insert sequence Length = 1427 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||||||| | ||| || || | ||| ||||||| ||| Sbjct: 1107 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1048 Query: 483 ctcacgccggcctcgccctccgccgccagcgcgaacaccaccggcc 528 ||||||||||||||||| ||| | ||||||| ||||| |||||||| Sbjct: 1047 ctcacgccggcctcgccgtccacggccagcgagaacagcaccggcc 1002 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 564 gccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacaccgg 613 |||||||| ||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 972 gccttgaacacgtccgtgccacggcggacgccgccgtcgaggaacaccgg 923
>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds Length = 1486 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 438 gccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctcg 497 ||||||||||||||||||||||| || | ||| | ||||| |||||||| || ||||| Sbjct: 1115 gccatggtgagctcgaactcctcgcggagcatttgaagcaccttcctcacaccagcctca 1056 Query: 498 ccctccgccgccagcgcgaacaccaccggccgcccaat 535 || ||||| |||| | |||||||||||||| |||||| Sbjct: 1055 ccttccgcagccaaagagaacaccaccggcctcccaat 1018
>gb|AY111188.1| Zea mays CL15761_1 mRNA sequence Length = 651 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 548 ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtc 601 ||||||||| || |||||||| || |||||||||||||| |||||||||||||| Sbjct: 376 ggcgccgagcgccagcgccttcaacacgtcggtgccgcgccggacgccgccgtc 429
>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full insert sequence Length = 1986 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 423 gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 482 ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| ||||| Sbjct: 1621 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 1562 Query: 483 ctcacgccggcctcgcc 499 ||||||||||||||||| Sbjct: 1561 ctcacgccggcctcgcc 1545
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 548 ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggta 607 |||||||||||| |||||||||| |||||| |||| || ||||| || ||||||||| | Sbjct: 2791356 ggcgccgagggccagcgccttgaccacgtcgttgcctcgccggacacctccgtcgaggaa 2791297 Query: 608 caccg 612 ||||| Sbjct: 2791296 caccg 2791292 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 gccgcggcggacgccgccgt 600 |||||||||||||||||||| Sbjct: 1299673 gccgcggcggacgccgccgt 1299654
>gb|BT016685.1| Zea mays clone Contig518 mRNA sequence Length = 1395 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 435 agcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcc 494 ||||||||||||| ||||| ||| |||| || ||| |||||| | |||||||| || ||| Sbjct: 1079 agcgccatggtgatctcgagctcatccctcagcatccgcagcgcattcctcacccctgcc 1020 Query: 495 tcgccctccgccgccagcgcgaacaccaccggccgcccaatgaagacgccggaggcgccg 554 ||| ||| | || || ||||||| || |||| ||||| || || || ||||| || Sbjct: 1019 ctgccgtccacggcgagggcgaacagtacgggccttccaataaacactcctgaggctccc 960 Query: 555 agggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgaggtacac 610 || || | |||||||| ||||| ||||| ||||||| ||||||||||||| |||| Sbjct: 959 agcgccaaggccttgaacacgtcagtgccacggcggatgccgccgtcgaggaacac 904
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 548 ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcga 603 ||||||||| ||||||||||||||||||||| |||| |||||| |||| ||||| Sbjct: 218011 ggcgccgagcgcgagcgccttgaagacgtcgtcgccggtgcggacaccgctgtcga 217956
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 558 gcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604 |||| |||||||| |||||| |||||||||||| |||||||||||| Sbjct: 3411357 gcgaccgccttgaccacgtcgctgccgcggcggatgccgccgtcgag 3411403 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 agcgggcgtccgaggcggtcgc 381 |||||||||||||||||||||| Sbjct: 277779 agcgggcgtccgaggcggtcgc 277800 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 564 gccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604 ||||||| |||||| ||||||| || |||||||||||||| Sbjct: 2410319 gccttgaccacgtcgctgccgcgccgcacgccgccgtcgag 2410359 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctcggcagcgggcgtccgag 373 |||||||||||||||||||| Sbjct: 5814716 ctcggcagcgggcgtccgag 5814697
>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster, complete sequence Length = 55972 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 552 ccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtc 601 ||||||||||| ||||||| |||||| ||||||| ||| || |||||||| Sbjct: 44018 ccgagggcgagggccttgaggacgtccgtgccgctgcgcacaccgccgtc 44067
>gb|AE007214.1| Sinorhizobium meliloti 1021 plasmid pSymA section 20 of 121 of the complete plasmid sequence Length = 12359 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 549 gcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtc 601 |||||||| |||| |||||||| |||||| | ||||||||||| |||||||| Sbjct: 11984 gcgccgagtgcgatcgccttgatgacgtccgcgccgcggcggataccgccgtc 11932
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 548 ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604 ||||||||| || |||||||||||||| ||| |||||| |||| ||||||||||| Sbjct: 785003 ggcgccgagcgccagcgccttgaagacatcgccgccgcgccggatcccgccgtcgag 784947
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 552 ccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604 ||||| |||||||| |||| ||| ||||||||||| ||||||||||||||| Sbjct: 1044207 ccgagtgcgagcgctttgaggacatcggtgccgcgcgtgacgccgccgtcgag 1044155
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 548 ggcgccgagggcgagcgccttgaagacgtcggtgccgcggcgga 591 |||||| || ||||||||||||| |||||||| ||||| ||||| Sbjct: 3292386 ggcgcccagcgcgagcgccttgacgacgtcggcgccgctgcgga 3292429 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 ccgccagcgcgaacaccaccg 525 ||||||||||||||||||||| Sbjct: 3258324 ccgccagcgcgaacaccaccg 3258304
>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster A47934, complete sequence Length = 69301 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 543 ccggaggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgc 597 ||||| || ||||| ||||||||| ||| ||||||||||||| ||||| ||||| Sbjct: 58415 ccggacgccccgagagcgagcgccctgagcacgtcggtgccgctgcggatgccgc 58361
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 583 cgcggcggacgccgccgtcgagg 605 ||||||||||||||||||||||| Sbjct: 8520622 cgcggcggacgccgccgtcgagg 8520600 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 549 gcgccgagggcgagcgccttgaagacgtcg 578 |||||||| |||||||||||||||| |||| Sbjct: 8916298 gcgccgagcgcgagcgccttgaagatgtcg 8916327
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 541 cgccggaggcgccgagggcgag 562 |||||||||||||||||||||| Sbjct: 337020 cgccggaggcgccgagggcgag 337041
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 cgccgccagcgcgaacaccaccggcc 528 |||||||||||||| ||||||||||| Sbjct: 940057 cgccgccagcgcgaccaccaccggcc 940082
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 585 cggcggacgccgccgtcgaggt 606 |||||||||||||||||||||| Sbjct: 3391080 cggcggacgccgccgtcgaggt 3391101 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 573 acgtcggtgccgcggcggacgccg 596 ||||||||||||||||||| |||| Sbjct: 1793702 acgtcggtgccgcggcggatgccg 1793679
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 541 cgccggaggcgccgagggcgag 562 |||||||||||||||||||||| Sbjct: 336925 cgccggaggcgccgagggcgag 336946
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 541 cgccggaggcgccgagggcgag 562 |||||||||||||||||||||| Sbjct: 337945 cgccggaggcgccgagggcgag 337966
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 572 gacgtcggtgccgcggcggacgccgccgtcgagg 605 |||||||| |||| ||||||||||||||||||| Sbjct: 192732 gacgtcggcgccggtgcggacgccgccgtcgagg 192765
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 558 gcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcga 603 |||| |||||||| || |||||||||||||| || |||||| |||| Sbjct: 5346101 gcgatcgccttgacgatgtcggtgccgcggccgaagccgccatcga 5346056 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 573 acgtcggtgccgcggcggacgccg 596 ||||||||||||||||||| |||| Sbjct: 6536967 acgtcggtgccgcggcggatgccg 6536990 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 ggcctcgccctccgccgcca 510 |||||||||||||||||||| Sbjct: 1654023 ggcctcgccctccgccgcca 1654004
>ref|XM_364317.1| Magnaporthe grisea 70-15 hypothetical protein (MG09162.4) partial mRNA Length = 1152 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 574 cgtcggtgccgcggcggacgccgccgtcg 602 ||||||||||| |||||||||||||||| Sbjct: 943 cgtcggtgccgtagcggacgccgccgtcg 915
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA) genes, complete cds; insertion sequence IS6100A, complete sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete cds; insertion sequence IS6100B, complete sequence; LinC (linC) gene, complete cds; insertion sequence IS6100C, complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX (orfX), and ORFY (orfY) genes, complete cds Length = 41034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gcctcgccctccgccgccagc 512 ||||||||||||||||||||| Sbjct: 34679 gcctcgccctccgccgccagc 34659
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 ggcggacgccgccgtcgaggt 606 ||||||||||||||||||||| Sbjct: 1965998 ggcggacgccgccgtcgaggt 1966018
>emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal brain of Homo sapiens (human) Length = 1491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gcctcgccctccgccgccagc 512 ||||||||||||||||||||| Sbjct: 590 gcctcgccctccgccgccagc 610
>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence Length = 205794 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gcctcgccctccgccgccagc 512 ||||||||||||||||||||| Sbjct: 136003 gcctcgccctccgccgccagc 135983
>dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830210F09 product:weakly similar to Putative L-lactate dehydrogenase (EC 1.1.2.3) [Bordetella parapertussis], full insert sequence Length = 7735 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 573 acgtcggtgccgcggcggacgccgc 597 ||||||||||||||||||| ||||| Sbjct: 7234 acgtcggtgccgcggcggaagccgc 7210
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 451 cgaactcctcccgcatcatgcgcag 475 |||| |||||||||||||||||||| Sbjct: 2682575 cgaaatcctcccgcatcatgcgcag 2682551
>gb|U17129.1|RSU17129 Rhodococcus erythropolis ThcA (thcA) gene, complete cds; and unknown genes Length = 17425 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 552 ccgagggcgagcgccttgaagacgtcggtgccgcggcggacgccgccgtcgag 604 ||||| || |||||||||| ||||||| |||||| || | |||||||||||| Sbjct: 4086 ccgagtgctagcgccttgacgacgtcgccgccgcgtcgaatgccgccgtcgag 4034
>dbj|D14044.1|CUCGLOX Cucurbita cv. Kurokawa Amakuri mRNA for glycolate oxidase, complete cds Length = 1381 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Minus Query: 480 ttcctcacgccggcctcgccctccgccgccagcgcgaacaccaccggccgcccaatgaag 539 |||||||| || ||||||||||| || |||| | ||||||||| |||| |||||| || Sbjct: 1067 ttcctcacaccagcctcgccctctgctgccaaagagaacaccactggcctcccaataaat 1008 Query: 540 acgccggaggcgccgag 556 | ||| || |||||||| Sbjct: 1007 atgccagatgcgccgag 991
>ref|NM_183869.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgcgaacaccaccggccgcc 531 |||||||||||||||||||| Sbjct: 162 cgcgaacaccaccggccgcc 143
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 ggcctcgccctccgccgcca 510 |||||||||||||||||||| Sbjct: 2892758 ggcctcgccctccgccgcca 2892777
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 gccctccgccgccagcgcga 516 |||||||||||||||||||| Sbjct: 1499835 gccctccgccgccagcgcga 1499854
>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence Length = 148711 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 gccctccgccgccagcgcga 516 |||||||||||||||||||| Sbjct: 74047 gccctccgccgccagcgcga 74066
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 ggtgcgaaatatggtggaaatggcgaga 126 |||||||||| |||||||||||| |||| Sbjct: 29983 ggtgcgaaatttggtggaaatggagaga 29956
>gb|AY690484.1| Bovine herpesvirus 1 strain Abu-Hammad glycoprotein D gene, partial cds Length = 1089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cggaggcgccgagggcgagc 563 |||||||||||||||||||| Sbjct: 966 cggaggcgccgagggcgagc 985
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 agacgccggaggcgccgagggcga 561 ||||||||||||||||||| |||| Sbjct: 1610822 agacgccggaggcgccgagcgcga 1610799
>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds Length = 3005 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 392 gatgtgttcgcgggtgatgtcgctgagc 419 |||||| ||||||||| ||||||||||| Sbjct: 1051 gatgtgctcgcgggtggtgtcgctgagc 1024
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06, complete sequence Length = 158842 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 ggtgcgaaatatggtggaaatggcgaga 126 |||||||||| |||||||||||| |||| Sbjct: 158442 ggtgcgaaatttggtggaaatggagaga 158415
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 392 gatgtgttcgcgggtgatgtcgctgagc 419 |||||| ||||||||| ||||||||||| Sbjct: 766325 gatgtgctcgcgggtggtgtcgctgagc 766298
>ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc70-interacting protein (Tb927.3.5340) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 gccctccgccgccagcgcga 516 |||||||||||||||||||| Sbjct: 700 gccctccgccgccagcgcga 719
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cggaggcgccgagggcgagc 563 |||||||||||||||||||| Sbjct: 119849 cggaggcgccgagggcgagc 119868
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ccgccgccagcgcgaacacc 521 |||||||||||||||||||| Sbjct: 67982 ccgccgccagcgcgaacacc 68001
>emb|Z23068.1|BHV12US Bovine herpesvirus type 1 subtype 2 short unique region DNA Length = 10066 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cggaggcgccgagggcgagc 563 |||||||||||||||||||| Sbjct: 5786 cggaggcgccgagggcgagc 5805
>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15 Length = 63598 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gtgcgttgcgttgcgttgcg 268 |||||||||||||||||||| Sbjct: 42541 gtgcgttgcgttgcgttgcg 42560
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 573 acgtcggtgccgcggcggacgccg 596 ||||||||||||||||||| |||| Sbjct: 6512 acgtcggtgccgcggcggatgccg 6535
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 agacgccggaggcgccgagggcga 561 ||||||||||||||||||| |||| Sbjct: 1497923 agacgccggaggcgccgagcgcga 1497900
>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete sequence Length = 186135 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 acatggaaatacaatatggt 92 |||||||||||||||||||| Sbjct: 166707 acatggaaatacaatatggt 166688
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 573 acgtcggtgccgcggcggacgccg 596 ||||||||||||||||||| |||| Sbjct: 4614562 acgtcggtgccgcggcggatgccg 4614585
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 392 gatgtgttcgcgggtgatgtcgctgagc 419 |||||| ||||||||| ||||||||||| Sbjct: 4277328 gatgtgctcgcgggtggtgtcgctgagc 4277355
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gtgcgttgcgttgcgttgcg 268 |||||||||||||||||||| Sbjct: 26559 gtgcgttgcgttgcgttgcg 26540
>gb|AE005993.1| Caulobacter crescentus CB15 section 319 of 359 of the complete genome Length = 10121 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 561 agcgccttgaagacgtcggtgccg 584 ||||||||||||||| |||||||| Sbjct: 2439 agcgccttgaagacgccggtgccg 2462
>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, section 68 of 469 of the complete genome Length = 11141 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 392 gatgtgttcgcgggtgatgtcgctgagc 419 |||||| ||||||||| ||||||||||| Sbjct: 3644 gatgtgctcgcgggtggtgtcgctgagc 3617
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 484 tcacgccggcctcgccctccgccgccagcgcg 515 |||||||||||||| |||||||| || ||||| Sbjct: 1830555 tcacgccggcctcggcctccgcctccggcgcg 1830586 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 573 acgtcggtgccgcggcggacgccg 596 ||||||||||||||||||| |||| Sbjct: 1791289 acgtcggtgccgcggcggatgccg 1791266
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 atgtatgataaatacagaat 42 |||||||||||||||||||| Sbjct: 22849581 atgtatgataaatacagaat 22849562
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 ggtgcgaaatatggtggaaatggcgaga 126 |||||||||| |||||||||||| |||| Sbjct: 17868791 ggtgcgaaatttggtggaaatggagaga 17868764
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgcgaacaccaccggccgcc 531 |||||||||||||||||||| Sbjct: 12787771 cgcgaacaccaccggccgcc 12787752
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone BACR48M01, complete sequence Length = 188272 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gtgcgttgcgttgcgttgcg 268 |||||||||||||||||||| Sbjct: 77465 gtgcgttgcgttgcgttgcg 77484
>gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, complete sequence Length = 175020 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccggcctcgccctccgccgcca 510 |||||||| ||||||||||||||| Sbjct: 90904 cgccggccccgccctccgccgcca 90881
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 cgccagcgcgaacaccaccggccg 529 |||||||||||||| ||||||||| Sbjct: 1569835 cgccagcgcgaacagcaccggccg 1569858
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgcgaacaccaccggccgcc 531 |||||||||||||||||||| Sbjct: 68170 cgcgaacaccaccggccgcc 68151
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgcgaacaccaccggccgcc 531 |||||||||||||||||||| Sbjct: 154800 cgcgaacaccaccggccgcc 154781
>gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, partial cds Length = 1036 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 gccggcctcgccctccgccgccag 511 |||| ||||||||||||||||||| Sbjct: 744 gccgccctcgccctccgccgccag 721
>emb|Z98199.1|BHVUS12 Bovine herpesvirus 1 genomic US region Length = 8599 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cggaggcgccgagggcgagc 563 |||||||||||||||||||| Sbjct: 5615 cggaggcgccgagggcgagc 5634
>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full insert sequence Length = 2833 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gtgcgttgcgttgcgttgcg 268 |||||||||||||||||||| Sbjct: 859 gtgcgttgcgttgcgttgcg 878
>dbj|AK100992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146F09, full insert sequence Length = 1581 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgcgaacaccaccggccgcc 531 |||||||||||||||||||| Sbjct: 315 cgcgaacaccaccggccgcc 296
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ccagcgcgaacaccaccggc 527 |||||||||||||||||||| Sbjct: 2409172 ccagcgcgaacaccaccggc 2409191
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete sequence Length = 290640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gtgcgttgcgttgcgttgcg 268 |||||||||||||||||||| Sbjct: 5027 gtgcgttgcgttgcgttgcg 5008
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gtgcgttgcgttgcgttgcg 268 |||||||||||||||||||| Sbjct: 111005 gtgcgttgcgttgcgttgcg 111024
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 392 gatgtgttcgcgggtgatgtcgctgagc 419 |||||| ||||||||| ||||||||||| Sbjct: 4284118 gatgtgctcgcgggtggtgtcgctgagc 4284145
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 ggtgcgaaatatggtggaaatggcgaga 126 |||||||||| |||||||||||| |||| Sbjct: 17963108 ggtgcgaaatttggtggaaatggagaga 17963081
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 atgtatgataaatacagaat 42 |||||||||||||||||||| Sbjct: 22777772 atgtatgataaatacagaat 22777753
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 atgtatgataaatacagaat 42 |||||||||||||||||||| Sbjct: 107263 atgtatgataaatacagaat 107282
>gb|M59846.1|HSBGIV Bovine herpesvirus type 1 glycoprotein gIV gene, complete cds Length = 1405 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cggaggcgccgagggcgagc 563 |||||||||||||||||||| Sbjct: 1038 cggaggcgccgagggcgagc 1057 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,540,038 Number of Sequences: 3902068 Number of extensions: 3540038 Number of successful extensions: 70824 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66646 Number of HSP's gapped (non-prelim): 4157 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)