ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29n14 |
|---|---|
| Clone Library Name | barley_pub |
>GCP2_ARATH (Q9M1S8) Probable glutamate carboxypeptidase 2 (EC 3.4.17.21)| (Probable glutamate carboxypeptidase II) Length = 705 Score = 60.1 bits (144), Expect = 6e-09 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAIA 497 LNDRLM ER F + EGI + W+KHL+YGP+ + + +PGIADAIA Sbjct: 625 LNDRLMLVERGFLDAEGIKGKEWFKHLVYGPAAEPESKLGFFPGIADAIA 674
>FOLH1_RAT (P70627) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (Fol Length = 752 Score = 53.1 bits (126), Expect = 7e-07 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAIATA-RRSNTSA 470 LND+LM ERAF + G+ + +Y+H+IY PS N + S+PGI DA+ + +TS Sbjct: 666 LNDQLMYLERAFIDPLGLPGRPFYRHIIYAPSSHNKYAGESFPGIYDALFDINNKVDTSK 725 Query: 469 SWK 461 +W+ Sbjct: 726 AWR 728
>FOLH1_MOUSE (O35409) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (F Length = 752 Score = 52.0 bits (123), Expect = 2e-06 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAI-ATARRSNTSA 470 +ND+LM ERAF + G+ + +Y+H+IY PS N + S+PGI DA+ + + N S Sbjct: 666 MNDQLMYLERAFIDPLGLPGRPFYRHIIYAPSSHNKYAGESFPGIYDALFDISSKVNASK 725 Query: 469 SW 464 +W Sbjct: 726 AW 727
>NALD2_HUMAN (Q9Y3Q0) N-acetylated-alpha-linked acidic dipeptidase 2 (EC| 3.4.17.21) (N-acetylated-alpha-linked acidic dipeptidase II) (NAALADase II) Length = 740 Score = 52.0 bits (123), Expect = 2e-06 Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAI-ATARRSNTSA 470 +ND+LM ERAF + G+ + +Y+H+I+ PS N + S+PGI DAI ++N+ Sbjct: 654 MNDQLMLLERAFIDPLGLPGKLFYRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANSRL 713 Query: 469 SWK 461 +WK Sbjct: 714 AWK 716
>FOLH1_PIG (O77564) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (Fol Length = 751 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/49 (46%), Positives = 33/49 (67%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAI 500 +ND+LM ERAF G+ +A+Y+H+IY PS N + S+PGI DA+ Sbjct: 665 MNDQLMFLERAFIVPLGLPDRAFYRHVIYAPSSHNKYMGESFPGIYDAL 713
>FOLH1_HUMAN (Q04609) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (F Length = 750 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/49 (44%), Positives = 33/49 (67%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAI 500 +ND+LM ERAF + G+ + +Y+H+IY PS N + S+PGI DA+ Sbjct: 664 MNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDAL 712
>NALD2_MOUSE (Q9CZR2) N-acetylated-alpha-linked acidic dipeptidase 2 (EC| 3.4.17.21) (N-acetylated-alpha-linked acidic dipeptidase II) (NAALADase II) (Glutamate carboxypeptidase III) (GCPIII) (N-acetylaspartylglutamate peptidase II) (NAAG-peptidase II) Length = 740 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAI-ATARRSNTSA 470 +ND+ M ERAF + G+ + +Y+H+I+ PS N + S+PGI DA+ +++ S Sbjct: 654 MNDQQMLLERAFIDPLGLPGRKFYRHIIFAPSSHNKYAGESFPGIYDAMFDIENKADPSL 713 Query: 469 SW 464 +W Sbjct: 714 AW 715
>NALDL_RAT (O54697) N-acetylated-alpha-linked acidic dipeptidase-like protein| (EC 3.4.17.21) (NAALADase L) (Ileal dipeptidylpeptidase) (100 kDa ileum brush border membrane protein) (I100) Length = 745 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/59 (37%), Positives = 36/59 (61%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAIATARRSNTSA 470 +ND+LM ERAF N ++ +Y H+++ P N A++PG+A+A A A+ N+ A Sbjct: 660 VNDQLMLLERAFLNPRAFPEERYYSHVLWAP---NTASVATFPGLANAYARAQEINSGA 715
>YGV9_SCHPO (O43023) Putative zinc metalloprotease C354.09c in chromosome II| Length = 794 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = -2 Query: 643 NDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAI 500 N +L + ER+F + G+ WYKHLIYGP+ +N + +P I DA+ Sbjct: 719 NAKLARFERSFLDEAGLPGHEWYKHLIYGPNLRNS-HSQLFPSIFDAL 765
>NALDL_MOUSE (Q7M758) N-acetylated-alpha-linked acidic dipeptidase-like protein| (EC 3.4.17.21) (NAALADase L) Length = 745 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAIATARRSNT-SA 470 +ND+LM ERAF N ++ Y H+++ P N ++PG+A+A A A+ N+ S Sbjct: 660 VNDQLMLLERAFLNPRAFPEERHYSHVLWAP---NTASVDTFPGLANAYAKAQEINSGSE 716 Query: 469 SW 464 +W Sbjct: 717 AW 718
>NALDL_HUMAN (Q9UQQ1) N-acetylated-alpha-linked acidic dipeptidase-like protein| (EC 3.4.17.21) (NAALADase L) (Ileal dipeptidylpeptidase) (100 kDa ileum brush border membrane protein) (I100) Length = 740 Score = 36.6 bits (83), Expect = 0.066 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -2 Query: 646 LNDRLMQAERAFTNREGIFKQAWYKHLIYGPSEQNDWDTASYPGIADAIATAR-RSNTSA 470 LND+LM ER F N ++ +Y H+++ PS + PG+++A + AR ++ S Sbjct: 655 LNDQLMLLERTFLNPRAFPEERYYSHVLWAPSHGL---RSHIPGLSNACSRARDTASGSE 711 Query: 469 SW 464 +W Sbjct: 712 AW 713
>YJZ9_YEAST (P47100) Transposon Ty1 protein B| Length = 1755 Score = 33.1 bits (74), Expect = 0.73 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Frame = +1 Query: 133 NTQTSTTHLPKAYVHGSHHTQTDRYHSYAPMVLPHPFVSTPNPSGNISPGGSIMG-TSMI 309 N+Q +TT A HH S++P P+P + G S G SMI Sbjct: 51 NSQQTTTPASSAVPENPHHASPQTAQSHSPQNGPYPQQCMMTQNQANPSGWSFYGHPSMI 110 Query: 310 MHGPKQILCSFFPL-PTDCYPAIPS 381 + P Q+ +FP P +P PS Sbjct: 111 PYTPYQMSPMYFPPGPQSQFPQYPS 135
>YTY1_YEAST (P08405) Transposon Ty1-15 52 kDa hypothetical protein| Length = 440 Score = 33.1 bits (74), Expect = 0.73 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Frame = +1 Query: 133 NTQTSTTHLPKAYVHGSHHTQTDRYHSYAPMVLPHPFVSTPNPSGNISPGGSIMG-TSMI 309 N+Q +TT A HH S++P P+P + G S G SMI Sbjct: 51 NSQQTTTPASSAVPENPHHASPQTAQSHSPQNGPYPQQCMMTQNQANPSGWSFYGHPSMI 110 Query: 310 MHGPKQILCSFFPL-PTDCYPAIPS 381 + P Q+ +FP P +P PS Sbjct: 111 PYTPYQMSPMYFPPGPQSQFPQYPS 135
>YJZ8_YEAST (P47099) Transposon Ty1 protein A| Length = 440 Score = 33.1 bits (74), Expect = 0.73 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Frame = +1 Query: 133 NTQTSTTHLPKAYVHGSHHTQTDRYHSYAPMVLPHPFVSTPNPSGNISPGGSIMG-TSMI 309 N+Q +TT A HH S++P P+P + G S G SMI Sbjct: 51 NSQQTTTPASSAVPENPHHASPQTAQSHSPQNGPYPQQCMMTQNQANPSGWSFYGHPSMI 110 Query: 310 MHGPKQILCSFFPL-PTDCYPAIPS 381 + P Q+ +FP P +P PS Sbjct: 111 PYTPYQMSPMYFPPGPQSQFPQYPS 135
>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region| Length = 153 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/77 (29%), Positives = 28/77 (36%) Frame = +1 Query: 154 HLPKAYVHGSHHTQTDRYHSYAPMVLPHPFVSTPNPSGNISPGGSIMGTSMIMHGPKQIL 333 H P + H HT T H + P PHP TP+P +P T H P L Sbjct: 20 HTPHPHPHPHPHTPTHT-HPHTPTPTPHPHPHTPHPHTTPTP------TPHHTHTPHTTL 72 Query: 334 CSFFPLPTDCYPAIPSV 384 + YP P V Sbjct: 73 SNLSLNLPSHYPTSPLV 89
>UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +1 Query: 409 RMPLPRPWRPCEPRAAPASTTPXXXXXXXXXXXXXXXGTTRYPSRSAPTV 558 R PLP PW P +++PAS T T S S P++ Sbjct: 308 RDPLPNPWAPQTSQSSPASGTTGSTTNTMSTSGGTATSTPAGQSTSGPSL 357
>NLK_MOUSE (O54949) Serine/threonine kinase NLK (EC 2.7.11.24) (Nemo-like| kinase) Length = 515 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/84 (27%), Positives = 33/84 (39%) Frame = +1 Query: 103 TLHAFAAH*QNTQTSTTHLPKAYVHGSHHTQTDRYHSYAPMVLPHPFVSTPNPSGNISPG 282 T A A H + HLP ++H HH Q + A V P V PS + Sbjct: 8 TSAAAAGHHHHHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHP---VQQHTPSAAAAAA 64 Query: 283 GSIMGTSMIMHGPKQILCSFFPLP 354 + +M+ G +Q +FP P Sbjct: 65 AAAAAAAMLNPGQQQ---PYFPSP 85
>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 30.8 bits (68), Expect = 3.6 Identities = 14/50 (28%), Positives = 19/50 (38%) Frame = +1 Query: 409 RMPLPRPWRPCEPRAAPASTTPXXXXXXXXXXXXXXXGTTRYPSRSAPTV 558 R PLP PW P P+++PAS + T S P + Sbjct: 308 RDPLPNPWAPQTPQSSPASGSTGSTTNTVSTSAGNATSTPAGQGTSGPNL 357
>DNAA1_CHLCV (Q823P0) Chromosomal replication initiator protein dnaA 1| Length = 450 Score = 30.8 bits (68), Expect = 3.6 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = +1 Query: 286 SIMGTSMIMHGPKQILCSFFPLPTDCYPAIPSVM*GCR*ARRMPLPRPWRPCEPRAAPAS 465 +I + ++ KQ LCSF PL PA+ V+ + A P+ P EP+ +PA Sbjct: 49 NIFVQNYLLDNYKQDLCSFVPLDAQGEPALEFVVAEIKKAPAQPI----APREPQESPAE 104 Query: 466 T 468 T Sbjct: 105 T 105
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 30.0 bits (66), Expect = 6.2 Identities = 34/127 (26%), Positives = 39/127 (30%) Frame = +1 Query: 169 YVHGSHHTQTDRYHSYAPMVLPHPFVSTPNPSGNISPGGSIMGTSMIMHGPKQILCSFFP 348 Y H H Q D PM L P S P P GS M S P Q S++P Sbjct: 123 YKHQMLHHQRDGPPGLVPMELESPPESPPVPP------GSYMPPSQSYMPPPQPPPSYYP 176 Query: 349 LPTDCYPAIPSVM*GCR*ARRMPLPRPWRPCEPRAAPASTTPXXXXXXXXXXXXXXXGTT 528 PT P +P P P P + AP TP + Sbjct: 177 -PTSSQPYLPPA---------QPSPSQSPPSQSYLAP---TPSYSSSSSSSQSYLSHSQS 223 Query: 529 RYPSRSA 549 PS A Sbjct: 224 YLPSSQA 230
>LPXN_HUMAN (O60711) Leupaxin| Length = 386 Score = 30.0 bits (66), Expect = 6.2 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Frame = +2 Query: 332 CVHSFHCRRTAILQSRPSCEAAAEHG-GCLCHGPGDPV 442 C SF L RP CE H G LCHG G P+ Sbjct: 299 CFTSFSTGSFFELDGRPFCELHYHHRRGTLCHGCGQPI 336 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,426,076 Number of Sequences: 219361 Number of extensions: 2064078 Number of successful extensions: 6392 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 6065 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6387 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
