>TERM_ADECC (Q65947) DNA terminal protein (Bellett protein) (pTP protein)|
          Length = 608

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 97  FVFHQIAVFLLLPPSRPPRAHFLLLFPCPHLYKDMKIILNLC--YIFRQRNFVR*QQIKL 270
           + +H++ +  L P         L L+P PHL    + ++  C  Y+F  R++ R +  ++
Sbjct: 53  YQYHRLMLMNLSPREPATEGWPLFLYPPPHLLVGYQYLVRTCNDYVFDTRSYSRLKYTEI 112

Query: 271 HI 276
           H+
Sbjct: 113 HL 114

>TERM_ADECR (Q96682) DNA terminal protein (Bellett protein) (pTP protein)|
          Length = 723

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 97  FVFHQIAVFLLLPPSRPPRAHFLLLFPCPHLYKDMKIILNLC--YIFRQRNFVR*QQIKL 270
           + +H++ +  L P         L L+P PHL    + ++  C  Y+F  R++ R +  ++
Sbjct: 168 YQYHRLMLMNLSPREPATEGWPLFLYPPPHLLVGYQYLVRTCNDYVFDTRSYSRLKYTEI 227

Query: 271 HI 276
           H+
Sbjct: 228 HL 229

>TEGU_SHV21 (Q01056) Probable large tegument protein|
          Length = 2469

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 30  VQNKQSMCITYSMLFLHRAKHIFCFSPNSC--VPFAPX-XXXXXXXXXXXXXMSPPVQRH 200
           VQ   ++C + SM  L + K IF F P+SC  VP +P               +SPP   +
Sbjct: 138 VQYFLAICNSKSMGILIKDKKIFIFDPHSCPLVPNSPAHVFSTSNVNDAIEYLSPP---N 194

Query: 201 ENYSKSVLYISAKKF 245
             Y+ S LY   K++
Sbjct: 195 VQYTGSFLYFVPKEY 209

>F262_HUMAN (O60825) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2|
           (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme)
           (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC
           2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]
          Length = 505

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 285 SYFL*KA-----YLSCPFLSIYKQTPIQYICNKKT 374
           +YFL K      YL CP  +I+K TP+ Y C  +T
Sbjct: 400 AYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVET 434

>F262_BOVIN (P26285) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2|
           (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme)
           (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC
           2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]
          Length = 530

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 285 SYFL*KA-----YLSCPFLSIYKQTPIQYICNKKT 374
           +YFL K      YL CP  +I+K TP+ Y C  +T
Sbjct: 400 AYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVET 434

>RPOB_BRAJA (Q89J74) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1372

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 667 LYVDGTTKRAYITNKLSSGKSIKRMDSLDGLYRMSHTHSETPPMRQAMSNLQ 512
           L +D     AYI N LS+ K++ R D+L  +YR+     E P +  A +  Q
Sbjct: 345 LDIDHVNVGAYIRNTLSADKNMTREDALFDIYRVMRP-GEPPTLDSAQAMFQ 395


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,277,269
Number of Sequences: 219361
Number of extensions: 2153607
Number of successful extensions: 5171
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5169
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 8071525748
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)