| Clone Name | rbaal29m17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 126 tttgctccctccctctcggccaccacgtgca 156 |||||||||||||||| |||||||||||||| Sbjct: 94772 tttgctccctccctcttggccaccacgtgca 94802
>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2) genes, complete cds Length = 328473 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 accacgtgcacactttcttctac 169 ||||||||||||||||||||||| Sbjct: 121705 accacgtgcacactttcttctac 121727
>gb|AC151350.2| Xenopus tropicalis clone ISB-400N1, complete sequence Length = 88948 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 aaacatatattttgtttttcac 108 |||||||||||||||||||||| Sbjct: 14863 aaacatatattttgtttttcac 14884
>gb|AC148757.2| Medicago truncatula clone mth2-57e16, complete sequence Length = 90963 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 acatatattttgtttttcacca 110 |||||||||||||||||||||| Sbjct: 16638 acatatattttgtttttcacca 16617
>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete sequence Length = 212227 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ccaaaacaagcaaagtatgtg 52 ||||||||||||||||||||| Sbjct: 111183 ccaaaacaagcaaagtatgtg 111163
>gb|AC106726.3| Homo sapiens 3 BAC RP11-450I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 200359 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caaaacatatattttgttttt 105 ||||||||||||||||||||| Sbjct: 58175 caaaacatatattttgttttt 58155
>gb|AC099034.1| Drosophila melanogaster, chromosome 2R, region 58B-58C, BAC clone BACR30O14, complete sequence Length = 186432 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 atatattttgtttttcaccaa 111 ||||||||||||||||||||| Sbjct: 88122 atatattttgtttttcaccaa 88102
>emb|AL772373.23| Zebrafish DNA sequence from clone CH211-143A22 in linkage group 14, complete sequence Length = 185265 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 atatattttgtttttcaccaa 111 ||||||||||||||||||||| Sbjct: 26925 atatattttgtttttcaccaa 26945
>gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome 16, complete sequence Length = 192492 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ccaaaacaagcaaagtatgtg 52 ||||||||||||||||||||| Sbjct: 179024 ccaaaacaagcaaagtatgtg 179004
>dbj|AB028617.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MOA2 Length = 52232 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 aaaacatatattttgtttttc 106 ||||||||||||||||||||| Sbjct: 31555 aaaacatatattttgtttttc 31575
>gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64 of 73 of the complete sequence Length = 288451 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 atatattttgtttttcaccaa 111 ||||||||||||||||||||| Sbjct: 900 atatattttgtttttcaccaa 880
>gb|AC004368.1|AC004368 Drosophila melanogaster DNA sequence (P1 DS05295 (D64)), complete sequence Length = 89885 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 atatattttgtttttcaccaa 111 ||||||||||||||||||||| Sbjct: 43185 atatattttgtttttcaccaa 43205
>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223, complete sequence Length = 101752 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 taaatctgtgttatatatttc 232 ||||||||||||||||||||| Sbjct: 94978 taaatctgtgttatatatttc 94998
>gb|DQ176853.1| Sus scrofa sialoadhesin mRNA, complete cds Length = 5222 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ctcggccaccacgtgcacactttct 164 |||||||||||||||||||| |||| Sbjct: 4353 ctcggccaccacgtgcacaccttct 4329
>gb|DQ278064.1| Haliotis rubra clone Hrub3.E02 microsatellite sequence Length = 458 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 694 agataattgatgctcatgatc 714 ||||||||||||||||||||| Sbjct: 188 agataattgatgctcatgatc 208 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,759,661 Number of Sequences: 3902068 Number of extensions: 8759661 Number of successful extensions: 180924 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 180885 Number of HSP's gapped (non-prelim): 39 length of query: 762 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 739 effective length of database: 17,143,297,704 effective search space: 12668897003256 effective search space used: 12668897003256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)