ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29l20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
2gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 86 2e-13
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
4gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 72 3e-09
5gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete se... 44 0.59
6gb|AY261360.1| African swine fever virus isolate Kenya 1950, com... 42 2.3
7ref|XM_759547.1| Theileria parva strain Muguga hypothetical prot... 42 2.3
8gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, co... 42 2.3
9gb|AC078981.19| Homo sapiens 3 BAC RP11-666A9 (Roswell Park Canc... 42 2.3
10gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, comp... 42 2.3
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
12gb|AC108026.5| Homo sapiens BAC clone RP11-41E15 from 4, complet... 42 2.3
13gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complet... 42 2.3
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
15emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136... 42 2.3
16emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chrom... 42 2.3
17gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, com... 40 9.3
18ref|NM_117664.2| Arabidopsis thaliana unknown protein AT4G15730 ... 40 9.3
19gb|AC161212.9| Mus musculus chromosome 3, clone RP24-267M11, com... 40 9.3
20gb|BT017993.1| Zea mays clone EL01N0526C07.c mRNA sequence 40 9.3
21gb|BC074209.1| Xenopus laevis MGC83366 protein, mRNA (cDNA clone... 40 9.3
22ref|XM_415719.1| PREDICTED: Gallus gallus LOC417471 (LOC417471),... 40 9.3
23ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome reg... 40 9.3
24gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, comp... 40 9.3
25gb|AC109266.24| Mus musculus chromosome 16, clone RP23-176C2, co... 40 9.3
26gb|AC006377.3| Homo sapiens BAC clone RP11-450H7 from 7, complet... 40 9.3
27gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome... 40 9.3
28gb|AF000265.2| Caenorhabditis elegans cosmid C18E3, complete seq... 40 9.3
29gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, com... 40 9.3
30gb|AC142309.1| Pan troglodytes BAC clone RP43-45E24 from 7, comp... 40 9.3
31emb|AL390246.17| Human DNA sequence from clone RP11-490C5 on chr... 40 9.3
32gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome... 40 9.3
33emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 9.3
34gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 9.3
35emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, ... 40 9.3
36emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in... 40 9.3
37gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome... 40 9.3
38dbj|AK126467.1| Homo sapiens cDNA FLJ44503 fis, clone UTERU3001158 40 9.3
39dbj|AK125029.1| Homo sapiens cDNA FLJ43039 fis, clone BRTHA3003023 40 9.3
40gb|AC022716.13| Homo sapiens chromosome 8, clone RP11-135I5, com... 40 9.3
41gb|BT006487.1| Arabidopsis thaliana At4g15730 gene, complete cds 40 9.3
42gb|AC156801.2| Mus musculus BAC clone RP23-142F22 from chromosom... 40 9.3
43dbj|AK036201.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 9.3
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
45gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosom... 40 9.3
46gb|AC010878.4| Homo sapiens BAC clone RP11-230E20 from 2, comple... 40 9.3
47gb|AC099555.4| Papio anubis clone RP41-390O6, complete sequence 40 9.3
48gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, co... 40 9.3
49emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chro... 40 9.3
50dbj|AK117862.1| Arabidopsis thaliana At4g15730 mRNA for unknown ... 40 9.3
51gb|AY109023.1| Zea mays PCO067561 mRNA sequence 40 9.3
52gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome... 40 9.3
53dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.3
54dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.3
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
56emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 40 9.3
57gb|AC138719.4| Mus musculus BAC clone RP23-178O8 from 10, comple... 40 9.3
58gb|AC002390.1|AC002390 Human DNA from overlapping chromosome 19-... 40 9.3
59emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 m... 40 9.3
60gb|AC092818.4| Homo sapiens chromosome 8, clone RP11-419C23, com... 40 9.3
61dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 9.3 
>dbj|AK072045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A03, full
            insert sequence
          Length = 1757

 Score =  186 bits (94), Expect = 6e-44
 Identities = 246/299 (82%)
 Strand = Plus / Minus

                                                                        
Query: 380  tcctgataccatcaaaccaatctttctgaaaaggaagccaggcccattacagcaagtaaa 439
            ||||||| ||||||||||||| | || |||| |||||||||| ||| || ||||| ||  
Sbjct: 1238 tcctgattccatcaaaccaatttgtccgaaatggaagccagggccactagagcaaatagg 1179

                                                                        
Query: 440  caaagcaacgacaatgcatccacgatgccaaatgaagactccgcaaggaagtagatcttg 499
            ||||| || || ||  ||||||| |||||||| ||||| || | ||| ||||||||||||
Sbjct: 1178 caaagtaatgaaaagacatccacaatgccaaaagaagattctgtaagaaagtagatcttg 1119

                                                                        
Query: 500  tgcttgctaggatcgccgcggtatcctcgagcaaccattgcctttgatatttgctccgcg 559
            || ||| |||| || || ||  |||| ||||||| ||| ||||| ||||||||||| |||
Sbjct: 1118 tggttgttagggtcaccacgaaatccgcgagcaatcatggccttggatatttgctctgcg 1059

                                                                        
Query: 560  tgatcaaatatatttttgaaaattcgctggacatagttgnnnnnnntctctatagtttcc 619
            ||||||||||||||||||||||||||| | |||||||||       | || |||||||||
Sbjct: 1058 tgatcaaatatatttttgaaaattcgccgcacatagttgaagaaaatgtcaatagtttcc 999

                                                                       
Query: 620  atagtagccagctttttccaatcaatccgacgtgttacgattgccagtgcagaattgcg 678
            ||||| |||||||||| |||||  |||||||||| ||| || |||||||| ||||||||
Sbjct: 998  atagttgccagcttttcccaatttatccgacgtgctacaatcgccagtgctgaattgcg 940
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 540   cctttgatatttgctccgcgtgatcaaatatatttttgaaaattcgctggacatagttg 598
             |||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||
Sbjct: 45602 ccttggatatttgctctgcgtgatcaaatatatttttgaaaattcgccgcacatagttg 45544



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 611   atagtttccatagtagccagctttttccaatcaatccgacgtgttacgattgccagtgca 670
             |||||||||||||| |||||||||| |||||  |||||||||| ||| || |||||||| 
Sbjct: 44607 atagtttccatagttgccagcttttcccaatttatccgacgtgctacaatcgccagtgct 44548

                     
Query: 671   gaattgcg 678
             ||||||||
Sbjct: 44547 gaattgcg 44540



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/126 (81%)
 Strand = Plus / Minus

                                                                         
Query: 385   ataccatcaaaccaatctttctgaaaaggaagccaggcccattacagcaagtaaacaaag 444
             |||||||||||||||| | || |||| |||||||||| ||| || ||||| ||  |||||
Sbjct: 46810 ataccatcaaaccaatttgtccgaaatggaagccagggccactagagcaaataggcaaag 46751

                                                                         
Query: 445   caacgacaatgcatccacgatgccaaatgaagactccgcaaggaagtagatcttgtgctt 504
              || || ||  ||||||| |||||||| ||||| || | ||| |||||||||||||| ||
Sbjct: 46750 taatgaaaagacatccacaatgccaaaagaagattctgtaagaaagtagatcttgtggtt 46691

                   
Query: 505   gctagg 510
             | ||||
Sbjct: 46690 gttagg 46685
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 540      cctttgatatttgctccgcgtgatcaaatatatttttgaaaattcgctggacatagttg 598
                |||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||
Sbjct: 19342253 ccttggatatttgctctgcgtgatcaaatatatttttgaaaattcgccgcacatagttg 19342195



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 611      atagtttccatagtagccagctttttccaatcaatccgacgtgttacgattgccagtgca 670
                |||||||||||||| |||||||||| |||||  |||||||||| ||| || |||||||| 
Sbjct: 19341258 atagtttccatagttgccagcttttcccaatttatccgacgtgctacaatcgccagtgct 19341199

                        
Query: 671      gaattgcg 678
                ||||||||
Sbjct: 19341198 gaattgcg 19341191



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/126 (81%)
 Strand = Plus / Minus

                                                                            
Query: 385      ataccatcaaaccaatctttctgaaaaggaagccaggcccattacagcaagtaaacaaag 444
                |||||||||||||||| | || |||| |||||||||| ||| || ||||| ||  |||||
Sbjct: 19343461 ataccatcaaaccaatttgtccgaaatggaagccagggccactagagcaaataggcaaag 19343402

                                                                            
Query: 445      caacgacaatgcatccacgatgccaaatgaagactccgcaaggaagtagatcttgtgctt 504
                 || || ||  ||||||| |||||||| ||||| || | ||| |||||||||||||| ||
Sbjct: 19343401 taatgaaaagacatccacaatgccaaaagaagattctgtaagaaagtagatcttgtggtt 19343342

                      
Query: 505      gctagg 510
                | ||||
Sbjct: 19343341 gttagg 19343336
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
              complete sequence
          Length = 146303

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                          
Query: 611    atagtttccatagtagccagctttttccaatcaatccgacgtgttacgattgccagtgca 670
              |||||||||||||| |||||||||| |||||  |||||||||| ||| || |||||||| 
Sbjct: 145333 atagtttccatagttgccagcttttcccaatttatccgacgtgctacaatcgccagtgct 145274

                      
Query: 671    gaattgcg 678
              ||||||||
Sbjct: 145273 gaattgcg 145266



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 565    aaatatatttttgaaaattcgctggacatagttg 598
              |||||||||||||||||||||| | |||||||||
Sbjct: 146303 aaatatatttttgaaaattcgccgcacatagttg 146270
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>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence
          Length = 90044

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 391  tcaaaccaatctttctgaaaag 412
            ||||||||||||||||||||||
Sbjct: 6647 tcaaaccaatctttctgaaaag 6626
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>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome
          Length = 193886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 558  cgtgatcaaatatatttttga 578
            |||||||||||||||||||||
Sbjct: 6494 cgtgatcaaatatatttttga 6474
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>ref|XM_759547.1| Theileria parva strain Muguga hypothetical protein (TP02_0071)
           partial mRNA
          Length = 882

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 380 tcctgataccatcaaaccaat 400
           |||||||||||||||||||||
Sbjct: 873 tcctgataccatcaaaccaat 853
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>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence
          Length = 181948

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     tcactaataaacaggctaata 58
              |||||||||||||||||||||
Sbjct: 113693 tcactaataaacaggctaata 113673
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>gb|AC078981.19| Homo sapiens 3 BAC RP11-666A9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160577

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   aaatggttagtggtcatttga 142
             |||||||||||||||||||||
Sbjct: 95899 aaatggttagtggtcatttga 95879
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>gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, complete sequence
          Length = 188261

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 563   tcaaatatatttttgaaaatt 583
             |||||||||||||||||||||
Sbjct: 74444 tcaaatatatttttgaaaatt 74424
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 304    ccccaaaattgattgtggaaatcac 328
              |||| ||||||||||||||||||||
Sbjct: 697746 ccccgaaattgattgtggaaatcac 697722
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>gb|AC108026.5| Homo sapiens BAC clone RP11-41E15 from 4, complete sequence
          Length = 123902

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   attttggatgttattcttttg 201
             |||||||||||||||||||||
Sbjct: 90491 attttggatgttattcttttg 90471
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>gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complete sequence
          Length = 147091

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 325    tcacagttttgaataacatgc 345
              |||||||||||||||||||||
Sbjct: 143878 tcacagttttgaataacatgc 143898
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 304    ccccaaaattgattgtggaaatcac 328
              |||| ||||||||||||||||||||
Sbjct: 697746 ccccgaaattgattgtggaaatcac 697722
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>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 118211

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 304   ccccaaaattgattgtggaaatcac 328
             |||| ||||||||||||||||||||
Sbjct: 81388 ccccgaaattgattgtggaaatcac 81412
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>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete
            sequence
          Length = 182529

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  aaaattgattgtggaaatcac 328
            |||||||||||||||||||||
Sbjct: 6621 aaaattgattgtggaaatcac 6641
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>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   tatttgaggttgttacatcactaa 44
            ||||||||||||||||||| ||||
Sbjct: 5941 tatttgaggttgttacatctctaa 5918
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>ref|NM_117664.2| Arabidopsis thaliana unknown protein AT4G15730 mRNA, complete cds
          Length = 4372

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 gaatcatgctgtacaaagaa 228
           ||||||||||||||||||||
Sbjct: 664 gaatcatgctgtacaaagaa 683
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>gb|AC161212.9| Mus musculus chromosome 3, clone RP24-267M11, complete sequence
          Length = 147921

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 21   tatttgaggttgttacatcactaa 44
            ||||||||||||||||||| ||||
Sbjct: 3530 tatttgaggttgttacatctctaa 3553
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>gb|BT017993.1| Zea mays clone EL01N0526C07.c mRNA sequence
          Length = 1109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 ttgattgtggaaatcacagt 331
           ||||||||||||||||||||
Sbjct: 505 ttgattgtggaaatcacagt 486
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>gb|BC074209.1| Xenopus laevis MGC83366 protein, mRNA (cDNA clone MGC:83366
            IMAGE:6866558), complete cds
          Length = 3373

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  tcccatgatgccccaaaatt 313
            ||||||||||||||||||||
Sbjct: 2376 tcccatgatgccccaaaatt 2357
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>ref|XM_415719.1| PREDICTED: Gallus gallus LOC417471 (LOC417471), mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 catcaaaccaatctttctga 408
           ||||||||||||||||||||
Sbjct: 510 catcaaaccaatctttctga 491
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>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on
             chromosome 15
          Length = 755217

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   aaatatatttttgaaaattc 584
             ||||||||||||||||||||
Sbjct: 98116 aaatatatttttgaaaattc 98097
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>gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, complete sequence
          Length = 164355

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 569   atatttttgaaaattcgctggacatagt 596
             |||||||| |||||| ||||||||||||
Sbjct: 95350 atatttttaaaaattagctggacatagt 95323
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>gb|AC109266.24| Mus musculus chromosome 16, clone RP23-176C2, complete sequence
          Length = 171797

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    taaatttgatacactgatat 23
            ||||||||||||||||||||
Sbjct: 4220 taaatttgatacactgatat 4239
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>gb|AC006377.3| Homo sapiens BAC clone RP11-450H7 from 7, complete sequence
          Length = 176463

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   caaatatatttttgaaaatt 583
             ||||||||||||||||||||
Sbjct: 30707 caaatatatttttgaaaatt 30726
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>gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome 15, complete sequence
          Length = 155411

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    gatcaaatatatttttgaaa 580
              ||||||||||||||||||||
Sbjct: 127578 gatcaaatatatttttgaaa 127559
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>gb|AF000265.2| Caenorhabditis elegans cosmid C18E3, complete sequence
          Length = 44171

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   caaatatatttttgaaaatt 583
             ||||||||||||||||||||
Sbjct: 41214 caaatatatttttgaaaatt 41233
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>gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, complete sequence
          Length = 146878

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 569   atatttttgaaaattcgctggacatagt 596
             |||||||| |||||| ||||||||||||
Sbjct: 94564 atatttttaaaaattagctggacatagt 94591
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>gb|AC142309.1| Pan troglodytes BAC clone RP43-45E24 from 7, complete sequence
          Length = 186055

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 564   caaatatatttttgaaaatt 583
             ||||||||||||||||||||
Sbjct: 64297 caaatatatttttgaaaatt 64278
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>emb|AL390246.17| Human DNA sequence from clone RP11-490C5 on chromosome 9 Contains a
             ribosomal protein L7 (RPL7) pseudogene and a CpG island,
             complete sequence
          Length = 103750

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    tgttacatcactaataaacaggct 54
             ||||||||||||||||||| ||||
Sbjct: 61959 tgttacatcactaataaactggct 61982
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>gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome Systems Human BAC
              Library) complete sequence
          Length = 147124

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    ggattttggatgttattctt 198
              ||||||||||||||||||||
Sbjct: 135411 ggattttggatgttattctt 135430
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>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4
          Length = 205065

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    gaatcatgctgtacaaagaa 228
              ||||||||||||||||||||
Sbjct: 125077 gaatcatgctgtacaaagaa 125058
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 181     attttggatgttattctttt 200
               ||||||||||||||||||||
Sbjct: 3213513 attttggatgttattctttt 3213494
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>emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 42
          Length = 195068

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   gaatcatgctgtacaaagaa 228
             ||||||||||||||||||||
Sbjct: 82131 gaatcatgctgtacaaagaa 82112
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>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23,
             complete sequence
          Length = 74936

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tcactaataaacaggctaat 57
             ||||||||||||||||||||
Sbjct: 41988 tcactaataaacaggctaat 42007
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>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence
          Length = 229862

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   gatcaaatatatttttgaaa 580
             ||||||||||||||||||||
Sbjct: 86623 gatcaaatatatttttgaaa 86604
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>dbj|AK126467.1| Homo sapiens cDNA FLJ44503 fis, clone UTERU3001158
          Length = 4319

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 564  caaatatatttttgaaaatt 583
            ||||||||||||||||||||
Sbjct: 3102 caaatatatttttgaaaatt 3083
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>dbj|AK125029.1| Homo sapiens cDNA FLJ43039 fis, clone BRTHA3003023
          Length = 3318

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 564  caaatatatttttgaaaatt 583
            ||||||||||||||||||||
Sbjct: 2101 caaatatatttttgaaaatt 2082
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>gb|AC022716.13| Homo sapiens chromosome 8, clone RP11-135I5, complete sequence
          Length = 163495

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 563   tcaaatatatttttgaaaat 582
             ||||||||||||||||||||
Sbjct: 30630 tcaaatatatttttgaaaat 30649
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>gb|BT006487.1| Arabidopsis thaliana At4g15730 gene, complete cds
          Length = 3180

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 gaatcatgctgtacaaagaa 228
           ||||||||||||||||||||
Sbjct: 246 gaatcatgctgtacaaagaa 265
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>gb|AC156801.2| Mus musculus BAC clone RP23-142F22 from chromosome 9, complete sequence
          Length = 197974

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   caaatatatttttgaaaatt 583
             ||||||||||||||||||||
Sbjct: 47951 caaatatatttttgaaaatt 47970
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>dbj|AK036201.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630045G24
            product:unclassifiable, full insert sequence
          Length = 3037

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 21   tatttgaggttgttacatcactaa 44
            ||||||||||||||||||| ||||
Sbjct: 2974 tatttgaggttgttacatctctaa 2997
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    ccccaaaattgattgtggaaatca 327
              |||| |||||||||||||||||||
Sbjct: 653830 ccccgaaattgattgtggaaatca 653807
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>gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosome 10, complete sequence
          Length = 201867

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 565    aaatatatttttgaaaattc 584
              ||||||||||||||||||||
Sbjct: 133545 aaatatatttttgaaaattc 133564
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>gb|AC010878.4| Homo sapiens BAC clone RP11-230E20 from 2, complete sequence
          Length = 154115

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   ctgctcccatgatgccccaa 309
             ||||||||||||||||||||
Sbjct: 30444 ctgctcccatgatgccccaa 30463
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>gb|AC099555.4| Papio anubis clone RP41-390O6, complete sequence
          Length = 180643

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   caaatatatttttgaaaatt 583
             ||||||||||||||||||||
Sbjct: 91401 caaatatatttttgaaaatt 91420
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>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence
          Length = 174707

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   aaatatatttttgaaaattc 584
             ||||||||||||||||||||
Sbjct: 98116 aaatatatttttgaaaattc 98097
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>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete
             sequence
          Length = 206478

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   ctgtacaaagaaattacaaa 236
             ||||||||||||||||||||
Sbjct: 57103 ctgtacaaagaaattacaaa 57122
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>dbj|AK117862.1| Arabidopsis thaliana At4g15730 mRNA for unknown protein, complete
           cds, clone: RAFL19-03-A02
          Length = 3952

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 gaatcatgctgtacaaagaa 228
           ||||||||||||||||||||
Sbjct: 664 gaatcatgctgtacaaagaa 683
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>gb|AY109023.1| Zea mays PCO067561 mRNA sequence
          Length = 789

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 ttgattgtggaaatcacagt 331
           ||||||||||||||||||||
Sbjct: 765 ttgattgtggaaatcacagt 746
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>gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome 16, complete sequence
          Length = 183487

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      taaatttgatacactgatat 23
              ||||||||||||||||||||
Sbjct: 170540 taaatttgatacactgatat 170559
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>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete
             sequence
          Length = 185588

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   atcaaatatatttttgaaaa 581
             ||||||||||||||||||||
Sbjct: 63183 atcaaatatatttttgaaaa 63164
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>dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-139F6, complete
              sequence
          Length = 163604

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 562    atcaaatatatttttgaaaa 581
              ||||||||||||||||||||
Sbjct: 147719 atcaaatatatttttgaaaa 147700
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    ccccaaaattgattgtggaaatca 327
              |||| |||||||||||||||||||
Sbjct: 653830 ccccgaaattgattgtggaaatca 653807
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   ccccaaaattgattgtggaaatca 327
             |||| |||||||||||||||||||
Sbjct: 89142 ccccgaaattgattgtggaaatca 89165
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>gb|AC138719.4| Mus musculus BAC clone RP23-178O8 from 10, complete sequence
          Length = 183689

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   aaatatatttttgaaaattc 584
             ||||||||||||||||||||
Sbjct: 23875 aaatatatttttgaaaattc 23894
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>gb|AC002390.1|AC002390 Human DNA from overlapping chromosome 19-specific cosmids R30072 and
             R28588, genomic sequence, complete sequence
          Length = 70311

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ctaataaacaggctaataaa 60
             ||||||||||||||||||||
Sbjct: 52711 ctaataaacaggctaataaa 52692
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>emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 map Xq28, complete
             sequence
          Length = 167178

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   ggattttggatgttattctt 198
             ||||||||||||||||||||
Sbjct: 22802 ggattttggatgttattctt 22783
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>gb|AC092818.4| Homo sapiens chromosome 8, clone RP11-419C23, complete sequence
          Length = 175100

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   atcaaatatatttttgaaaa 581
             ||||||||||||||||||||
Sbjct: 69020 atcaaatatatttttgaaaa 69039
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>dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 8/19, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   atcaaatatatttttgaaaa 581
             ||||||||||||||||||||
Sbjct: 72314 atcaaatatatttttgaaaa 72333


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,790,442
Number of Sequences: 3902068
Number of extensions: 6790442
Number of successful extensions: 140408
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140045
Number of HSP's gapped (non-prelim): 363
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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