ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189108.2| Oryza sativa (japonica cultivar-group), mRNA 295 7e-77
2ref|XM_507141.1| PREDICTED Oryza sativa (japonica cultivar-group... 295 7e-77
3dbj|AK070227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 7e-77
4dbj|AK060121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 7e-77
5gb|AY106565.1| Zea mays PCO096548 mRNA sequence 200 3e-48
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
7dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
8dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
9dbj|AK060661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
10dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone... 58 3e-05
11emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m... 52 0.002
12ref|NM_121723.3| Arabidopsis thaliana electron transporter/ meta... 50 0.007
13gb|BT000984.1| Arabidopsis thaliana clone U09484 unknown protein... 50 0.007
14gb|AY035119.1| Arabidopsis thaliana unknown protein (At5g17170) ... 50 0.007
15emb|BX831408.1|CNS0A09X Arabidopsis thaliana Full-length cDNA Co... 50 0.007
16emb|BX830489.1|CNS0A065 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
17emb|BX829838.1|CNS09ZY3 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
18gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 42 1.7
19gb|U26679.1|ABU26679 Azospirillum brasilense lateral flagellin (... 42 1.7
20gb|AC117615.11| Mus musculus chromosome 19, clone RP23-110D20, c... 40 6.6
21gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, c... 40 6.6
22gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.6
23ref|XM_781195.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.6
24emb|AL590629.16| Mouse DNA sequence from clone RP23-202F23 on ch... 40 6.6
25gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, co... 40 6.6
26dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827 40 6.6
27dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183 40 6.6
28gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Can... 40 6.6
29gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosom... 40 6.6
30gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, comple... 40 6.6
31dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.6
32gb|AC106776.4| Homo sapiens chromosome 5 clone RP11-325M13, comp... 40 6.6
33dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, ... 40 6.6
34dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.6
35gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete... 40 6.6
36gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.67... 40 6.6
37gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 6.6
38dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.6
39emb|AJ617740.1| Pseudomonas putida clc transposon 40 6.6
40dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.6 
>ref|NM_189108.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 934

 Score =  295 bits (149), Expect = 7e-77
 Identities = 377/451 (83%), Gaps = 4/451 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 793 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 734

                                                                       
Query: 86  gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 733 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 674

                                                                       
Query: 146 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 205
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 673 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 614

                                                                       
Query: 206 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 265
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 613 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 554

                                                                       
Query: 266 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 325
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 553 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 494

                                                                       
Query: 326 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 385
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 493 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 437

                                                                       
Query: 386 tgcttggatggctgtcttggtgaatcccagcttgtctgccggccacaacctcatcaccga 445
           ||| |||||||||||||||||||| |||||||| ||||| |||||  |  ||||| || |
Sbjct: 436 tgcctggatggctgtcttggtgaaccccagcttatctgcaggcca-tagttcatctccaa 378

                                          
Query: 446 agaagctgcttgtgtagagcacttggtcacc 476
           ||||||| |||||||||||||| ||||||||
Sbjct: 377 agaagctacttgtgtagagcacctggtcacc 347
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>ref|XM_507141.1| PREDICTED Oryza sativa (japonica cultivar-group), P0577B11.138 mRNA
          Length = 1003

 Score =  295 bits (149), Expect = 7e-77
 Identities = 377/451 (83%), Gaps = 4/451 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 823 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 764

                                                                       
Query: 86  gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 763 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 704

                                                                       
Query: 146 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 205
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 703 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 644

                                                                       
Query: 206 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 265
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 643 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 584

                                                                       
Query: 266 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 325
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 583 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 524

                                                                       
Query: 326 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 385
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 523 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 467

                                                                       
Query: 386 tgcttggatggctgtcttggtgaatcccagcttgtctgccggccacaacctcatcaccga 445
           ||| |||||||||||||||||||| |||||||| ||||| |||||  |  ||||| || |
Sbjct: 466 tgcctggatggctgtcttggtgaaccccagcttatctgcaggcca-tagttcatctccaa 408

                                          
Query: 446 agaagctgcttgtgtagagcacttggtcacc 476
           ||||||| |||||||||||||| ||||||||
Sbjct: 407 agaagctacttgtgtagagcacctggtcacc 377
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>dbj|AK070227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B21, full
           insert sequence
          Length = 934

 Score =  295 bits (149), Expect = 7e-77
 Identities = 377/451 (83%), Gaps = 4/451 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 793 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 734

                                                                       
Query: 86  gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 733 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 674

                                                                       
Query: 146 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 205
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 673 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 614

                                                                       
Query: 206 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 265
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 613 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 554

                                                                       
Query: 266 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 325
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 553 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 494

                                                                       
Query: 326 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 385
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 493 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 437

                                                                       
Query: 386 tgcttggatggctgtcttggtgaatcccagcttgtctgccggccacaacctcatcaccga 445
           ||| |||||||||||||||||||| |||||||| ||||| |||||  |  ||||| || |
Sbjct: 436 tgcctggatggctgtcttggtgaaccccagcttatctgcaggcca-tagttcatctccaa 378

                                          
Query: 446 agaagctgcttgtgtagagcacttggtcacc 476
           ||||||| |||||||||||||| ||||||||
Sbjct: 377 agaagctacttgtgtagagcacctggtcacc 347
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>dbj|AK060121.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F09, full
           insert sequence
          Length = 1003

 Score =  295 bits (149), Expect = 7e-77
 Identities = 377/451 (83%), Gaps = 4/451 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 823 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 764

                                                                       
Query: 86  gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 763 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 704

                                                                       
Query: 146 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 205
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 703 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 644

                                                                       
Query: 206 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 265
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 643 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 584

                                                                       
Query: 266 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 325
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 583 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 524

                                                                       
Query: 326 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 385
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 523 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 467

                                                                       
Query: 386 tgcttggatggctgtcttggtgaatcccagcttgtctgccggccacaacctcatcaccga 445
           ||| |||||||||||||||||||| |||||||| ||||| |||||  |  ||||| || |
Sbjct: 466 tgcctggatggctgtcttggtgaaccccagcttatctgcaggcca-tagttcatctccaa 408

                                          
Query: 446 agaagctgcttgtgtagagcacttggtcacc 476
           ||||||| |||||||||||||| ||||||||
Sbjct: 407 agaagctacttgtgtagagcacctggtcacc 377
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>gb|AY106565.1| Zea mays PCO096548 mRNA sequence
          Length = 1026

 Score =  200 bits (101), Expect = 3e-48
 Identities = 326/399 (81%), Gaps = 4/399 (1%)
 Strand = Plus / Minus

                                                                       
Query: 63  ccagcgatgccgataaccaaactgactatcacagtaagaggtggcagtgctccgccaatg 122
           |||||||||||||| |||||||| || ||||| |  | ||| ||||| || ||||| |||
Sbjct: 850 ccagcgatgccgatcaccaaacttacgatcacggcgataggcggcagagcgccgccgatg 791

                                                                       
Query: 123 ggcttcccagactctacgttgtatcttgcgaatcgcttctttggtgcattgcactgggga 182
           | |||||| |   |  ||| ||| || || || |||||||| || || |||||||| || 
Sbjct: 790 gccttcccggtggcagcgtcgtacctcgcaaaccgcttcttcggcgcgttgcactgtggg 731

                                                                       
Query: 183 cagccgtactcaccaggctgttcttcaaagggcttgggtagaaagtatatgtatccacaa 242
           || ||||| ||  | |||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 730 caaccgtagtcgtcgggctgttcgtcaaaaggcttgggtaggaagtatatgtacccacaa 671

                                                                       
Query: 243 tcaaggcagatgtgtgttgctctagccttctgtgaatcagacaacttccggccaaaccga 302
           |||||||||| ||| ||||||||  |||| |||||||||| || |||||| |||||||| 
Sbjct: 670 tcaaggcagacgtgcgttgctctctccttttgtgaatcagtcagcttccgtccaaaccgg 611

                                                                       
Query: 303 gggggcgccggcctcttgggcaggcgcttcacatcaatatcaccaccacccctgcttact 362
           || |||||||||||||| || ||||||||||| ||||   |  |  |||||||||| || 
Sbjct: 610 ggtggcgccggcctcttaggtaggcgcttcacgtcaa---cttcggcacccctgctcacg 554

                                                                       
Query: 363 acaaagtatacagagtctggctttgcttggatggctgtcttggtgaatcccagcttgtct 422
           || ||||| || ||||||| ||| ||||||||||||||||||||||| || ||||| || 
Sbjct: 553 acgaagtagacggagtctgacttcgcttggatggctgtcttggtgaacccaagcttatcc 494

                                                  
Query: 423 gccggccacaacctcatcaccgaagaagctgcttgtgta 461
           || |||||| | ||| || ||||||||||||||||||||
Sbjct: 493 gcaggccac-agctcgtctccgaagaagctgcttgtgta 456
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  119 bits (60), Expect = 9e-24
 Identities = 109/124 (87%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                           
Query: 353     cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaatcc 412
               |||||| || |||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 3689386 cctgctaaccacaaagtagacagagtctggctttgcctggatggctgtcttggtgaaccc 3689327

                                                                           
Query: 413     cagcttgtctgccggccacaacctcatcaccgaagaagctgcttgtgtagagcacttggt 472
               |||||| ||||| |||||  |  ||||| || |||||||| |||||||||||||| ||||
Sbjct: 3689326 cagcttatctgcaggcca-tagttcatctccaaagaagctacttgtgtagagcacctggt 3689268

                   
Query: 473     cacc 476
               ||||
Sbjct: 3689267 cacc 3689264



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                           
Query: 200     ctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgt 259
               ||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 3689832 ctgttcttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgt 3689773

                          
Query: 260     tgctctagcct 270
               |||||||||||
Sbjct: 3689772 tgctctagcct 3689762



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 144/177 (81%)
 Strand = Plus / Minus

                                                                           
Query: 26      agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
               |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 3690112 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 3690053

                                                                           
Query: 86      gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
               ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 3690052 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 3689993

                                                                        
Query: 146     tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctg 202
               | | ||||| |||||||||||||| ||||| || || ||||| || ||| |||||||
Sbjct: 3689992 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctg 3689936



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 288     ttccggccaaaccgagggggcgccggcctcttgggcaggcgcttcacatcaa 339
               ||||||||||| |  || ||||||||||| || || || |||||||||||||
Sbjct: 3689638 ttccggccaaatctcggaggcgccggccttttcggaagtcgcttcacatcaa 3689587
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>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ9990_A01
          Length = 101684

 Score =  119 bits (60), Expect = 9e-24
 Identities = 109/124 (87%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                         
Query: 353   cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaatcc 412
             |||||| || |||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 12883 cctgctaaccacaaagtagacagagtctggctttgcctggatggctgtcttggtgaaccc 12824

                                                                         
Query: 413   cagcttgtctgccggccacaacctcatcaccgaagaagctgcttgtgtagagcacttggt 472
             |||||| ||||| |||||  |  ||||| || |||||||| |||||||||||||| ||||
Sbjct: 12823 cagcttatctgcaggcca-tagttcatctccaaagaagctacttgtgtagagcacctggt 12765

                 
Query: 473   cacc 476
             ||||
Sbjct: 12764 cacc 12761



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 200   ctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgt 259
             ||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 13329 ctgttcttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgt 13270

                        
Query: 260   tgctctagcct 270
             |||||||||||
Sbjct: 13269 tgctctagcct 13259



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 144/177 (81%)
 Strand = Plus / Minus

                                                                         
Query: 26    agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
             |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 13609 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 13550

                                                                         
Query: 86    gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
             ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 13549 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 13490

                                                                      
Query: 146   tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctg 202
             | | ||||| |||||||||||||| ||||| || || ||||| || ||| |||||||
Sbjct: 13489 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctg 13433



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288   ttccggccaaaccgagggggcgccggcctcttgggcaggcgcttcacatcaa 339
             ||||||||||| |  || ||||||||||| || || || |||||||||||||
Sbjct: 13135 ttccggccaaatctcggaggcgccggccttttcggaagtcgcttcacatcaa 13084
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>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score =  119 bits (60), Expect = 9e-24
 Identities = 109/124 (87%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                          
Query: 353    cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaatcc 412
              |||||| || |||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 167892 cctgctaaccacaaagtagacagagtctggctttgcctggatggctgtcttggtgaaccc 167833

                                                                          
Query: 413    cagcttgtctgccggccacaacctcatcaccgaagaagctgcttgtgtagagcacttggt 472
              |||||| ||||| |||||  |  ||||| || |||||||| |||||||||||||| ||||
Sbjct: 167832 cagcttatctgcaggcca-tagttcatctccaaagaagctacttgtgtagagcacctggt 167774

                  
Query: 473    cacc 476
              ||||
Sbjct: 167773 cacc 167770



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                          
Query: 200    ctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgt 259
              ||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 168338 ctgttcttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgt 168279

                         
Query: 260    tgctctagcct 270
              |||||||||||
Sbjct: 168278 tgctctagcct 168268



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 144/177 (81%)
 Strand = Plus / Minus

                                                                          
Query: 26     agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
              |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 168618 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 168559

                                                                          
Query: 86     gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 145
              ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 168558 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 168499

                                                                       
Query: 146    tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctg 202
              | | ||||| |||||||||||||| ||||| || || ||||| || ||| |||||||
Sbjct: 168498 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctg 168442



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                  
Query: 288    ttccggccaaaccgagggggcgccggcctcttgggcaggcgcttcacatcaa 339
              ||||||||||| |  || ||||||||||| || || || |||||||||||||
Sbjct: 168144 ttccggccaaatctcggaggcgccggccttttcggaagtcgcttcacatcaa 168093
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>dbj|AK060661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B02, full
           insert sequence
          Length = 297

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                       
Query: 26  agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 85
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 116 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 57

                                
Query: 86  gactatcacagtaagaggtgg 106
           ||| ||||| |||| ||||||
Sbjct: 56  gacgatcactgtaataggtgg 36
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>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b,
             complete sequence
          Length = 45450

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaatcc 412
             |||||| || |||||||| |||||||||||||| |||||||| || || || ||||| ||
Sbjct: 29887 cctgctgacaacaaagtagacagagtctggcttagcttggattgcggttttagtgaagcc 29946

                                  
Query: 413   cagcttgtctgccggccacaa 433
              ||||| || || ||||||||
Sbjct: 29947 aagcttatccgcaggccacaa 29967



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 227   gtatatgtatccacaatcaaggcagatgtgtgttgctctagcct 270
             ||||||| |||||||||||||||| ||||| || ||||||||||
Sbjct: 29276 gtatatgaatccacaatcaaggcaaatgtgagtagctctagcct 29319
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>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE
          Length = 141614

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 225   aagtatatgtatccacaatcaaggcagatgtgtgttgctctagcct 270
             |||||||||||||| || |||||||| ||||| || ||||||||||
Sbjct: 78988 aagtatatgtatccgcagtcaaggcaaatgtgagtagctctagcct 78943
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>ref|NM_121723.3| Arabidopsis thaliana electron transporter/ metal ion binding /
           protein binding AT5G17170 mRNA, complete cds
          Length = 1131

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 257
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 779 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 720

                            
Query: 258 gttgctctagccttctg 274
           || ||||| ||||||||
Sbjct: 719 gtagctcttgccttctg 703
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>gb|BT000984.1| Arabidopsis thaliana clone U09484 unknown protein (At5g17170) mRNA,
           complete cds
          Length = 847

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 257
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 647 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 588

                            
Query: 258 gttgctctagccttctg 274
           || ||||| ||||||||
Sbjct: 587 gtagctcttgccttctg 571
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>gb|AY035119.1| Arabidopsis thaliana unknown protein (At5g17170) mRNA, complete cds
          Length = 1100

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 257
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 732 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 673

                            
Query: 258 gttgctctagccttctg 274
           || ||||| ||||||||
Sbjct: 672 gtagctcttgccttctg 656
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>emb|BX831408.1|CNS0A09X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZA11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 817

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 257
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 529 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 470

                            
Query: 258 gttgctctagccttctg 274
           || ||||| ||||||||
Sbjct: 469 gtagctcttgccttctg 453
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>emb|BX830489.1|CNS0A065 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB85ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 257
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 700 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 641

                            
Query: 258 gttgctctagccttctg 274
           || ||||| ||||||||
Sbjct: 640 gtagctcttgccttctg 624
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>emb|BX829838.1|CNS09ZY3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 996

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 257
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 780 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 721

                            
Query: 258 gttgctctagccttctg 274
           || ||||| ||||||||
Sbjct: 720 gtagctcttgccttctg 704



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 30  tattgaaggccatatacaagcaaagc 55
           |||||||| |||||||||||||||||
Sbjct: 953 tattgaagaccatatacaagcaaagc 928
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 69     atgccgataaccaaactgact 89
              |||||||||||||||||||||
Sbjct: 241932 atgccgataaccaaactgact 241912
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>gb|U26679.1|ABU26679 Azospirillum brasilense lateral flagellin (laf1) gene, complete cds
          Length = 1573

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 299  ccgagggggcgccggcctctt 319
            |||||||||||||||||||||
Sbjct: 1483 ccgagggggcgccggcctctt 1503
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>gb|AC117615.11| Mus musculus chromosome 19, clone RP23-110D20, complete sequence
          Length = 191809

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    gccaatgggcttcccagactctac 139
              |||||||||||||||||| |||||
Sbjct: 182397 gccaatgggcttcccagagtctac 182374
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>gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, complete sequence
          Length = 248718

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    gccaatgggcttcccagactctac 139
              |||||||||||||||||| |||||
Sbjct: 170916 gccaatgggcttcccagagtctac 170939
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 52      aagcccctatgccagcgatg 71
               ||||||||||||||||||||
Sbjct: 3613408 aagcccctatgccagcgatg 3613427
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>ref|XM_781195.1| PREDICTED: Strongylocentrotus purpuratus similar to DEP domain
           containing 5 isoform 2 (LOC581181), mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 gtactcaccaggctgttctt 207
           ||||||||||||||||||||
Sbjct: 356 gtactcaccaggctgttctt 337
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>emb|AL590629.16| Mouse DNA sequence from clone RP23-202F23 on chromosome X, complete
             sequence
          Length = 171883

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   tactcaccaggctgttcttc 208
             ||||||||||||||||||||
Sbjct: 12522 tactcaccaggctgttcttc 12503
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>gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, complete sequence
          Length = 190225

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     acagtaagaggtggcagtgc 112
              ||||||||||||||||||||
Sbjct: 105365 acagtaagaggtggcagtgc 105346
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>dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827
          Length = 2906

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  aaccaaactgactatcacag 96
           ||||||||||||||||||||
Sbjct: 830 aaccaaactgactatcacag 811
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>dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183
          Length = 2304

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  aaccaaactgactatcacag 96
           ||||||||||||||||||||
Sbjct: 229 aaccaaactgactatcacag 210
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>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178328

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     aaccaaactgactatcacag 96
              ||||||||||||||||||||
Sbjct: 177289 aaccaaactgactatcacag 177270
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>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete
             sequence
          Length = 177253

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   aaagggcttgggtagaaagt 228
             ||||||||||||||||||||
Sbjct: 54024 aaagggcttgggtagaaagt 54005
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>gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, complete sequence
          Length = 109335

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    acagtaagaggtggcagtgc 112
             ||||||||||||||||||||
Sbjct: 66769 acagtaagaggtggcagtgc 66750
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    gcttgtctgccggccacaac 434
              ||||||||||||||||||||
Sbjct: 722560 gcttgtctgccggccacaac 722541
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>gb|AC106776.4| Homo sapiens chromosome 5 clone RP11-325M13, complete sequence
          Length = 114419

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   aaagggcttgggtagaaagt 228
             ||||||||||||||||||||
Sbjct: 80029 aaagggcttgggtagaaagt 80048
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>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete
             sequences
          Length = 174520

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   gatgtgtgttgctctagcct 270
             ||||||||||||||||||||
Sbjct: 29577 gatgtgtgttgctctagcct 29558
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>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11
          Length = 75188

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 227  gtatatgtatccacaatcaaggcagatgtgtgttgctctagcct 270
            ||||||| ||||||||||||| || ||||| || ||||| ||||
Sbjct: 9657 gtatatgaatccacaatcaagacaaatgtgagtagctcttgcct 9614
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>gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete sequence
          Length = 203072

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    cctgcttactacaaagtata 372
              ||||||||||||||||||||
Sbjct: 154790 cctgcttactacaaagtata 154809
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>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence
          Length = 156420

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    aaccaaactgactatcacag 96
             ||||||||||||||||||||
Sbjct: 20009 aaccaaactgactatcacag 20028
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 59      tatgccagcgatgccgataa 78
               ||||||||||||||||||||
Sbjct: 2207470 tatgccagcgatgccgataa 2207451
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>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  gatgtgtgttgctctagcct 270
            ||||||||||||||||||||
Sbjct: 1276 gatgtgtgttgctctagcct 1257
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>emb|AJ617740.1| Pseudomonas putida clc transposon
          Length = 105027

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aagcccctatgccagcgatg 71
             ||||||||||||||||||||
Sbjct: 50709 aagcccctatgccagcgatg 50690
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>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
            region, complete sequence
          Length = 158063

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  gatgtgtgttgctctagcct 270
            ||||||||||||||||||||
Sbjct: 1276 gatgtgtgttgctctagcct 1257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,718,250
Number of Sequences: 3902068
Number of extensions: 3718250
Number of successful extensions: 66422
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66240
Number of HSP's gapped (non-prelim): 174
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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