| Clone Name | rbaal29k20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191971.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5373 Score = 107 bits (54), Expect = 5e-20 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 552 ccaccagaataggctctcgaataatctggaacctgctcttcctcatactcttcgtccatg 611 |||||||||||| |||| |||||||||||||||||||| || ||| || || |||||| Sbjct: 5129 ccaccagaatagcctctagaataatctggaacctgctcatc---atattcctcatccatg 5073 Query: 612 ggctggccattttcctcattgtcttctgattgatctgattcggatccagagctgttctcg 671 || ||||||||||||||||| ||||||||||||||| | | |||||||| |||||||| Sbjct: 5072 ggttggccattttcctcattatcttctgattgatctaactgagatccagaactgttctca 5013 Query: 672 tcac 675 |||| Sbjct: 5012 tcac 5009 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 381 ccatcgtccccatcgtcacctatatcatcatcctcgtccatctcatcatcaacatca 437 ||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5291 ccatcctcaccatcatcacctatatcatcatcctcgtccatctcagcatcaacatca 5235 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 cgccttcatcttcatctgcattcacctc 376 |||||||||||||||| |||||| |||| Sbjct: 5341 cgccttcatcttcatcagcattcgcctc 5314
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 107 bits (54), Expect = 5e-20 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 552 ccaccagaataggctctcgaataatctggaacctgctcttcctcatactcttcgtccatg 611 |||||||||||| |||| |||||||||||||||||||| || ||| || || |||||| Sbjct: 27591522 ccaccagaatagcctctagaataatctggaacctgctcatc---atattcctcatccatg 27591466 Query: 612 ggctggccattttcctcattgtcttctgattgatctgattcggatccagagctgttctcg 671 || ||||||||||||||||| ||||||||||||||| | | |||||||| |||||||| Sbjct: 27591465 ggttggccattttcctcattatcttctgattgatctaactgagatccagaactgttctca 27591406 Query: 672 tcac 675 |||| Sbjct: 27591405 tcac 27591402 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 381 ccatcgtccccatcgtcacctatatcatcatcctcgtccatctcatcatcaacatca 437 ||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 27591684 ccatcctcaccatcatcacctatatcatcatcctcgtccatctcagcatcaacatca 27591628 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 cgccttcatcttcatctgcattcacctc 376 |||||||||||||||| |||||| |||| Sbjct: 27591734 cgccttcatcttcatcagcattcgcctc 27591707
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 107 bits (54), Expect = 5e-20 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 552 ccaccagaataggctctcgaataatctggaacctgctcttcctcatactcttcgtccatg 611 |||||||||||| |||| |||||||||||||||||||| || ||| || || |||||| Sbjct: 58816 ccaccagaatagcctctagaataatctggaacctgctcatc---atattcctcatccatg 58760 Query: 612 ggctggccattttcctcattgtcttctgattgatctgattcggatccagagctgttctcg 671 || ||||||||||||||||| ||||||||||||||| | | |||||||| |||||||| Sbjct: 58759 ggttggccattttcctcattatcttctgattgatctaactgagatccagaactgttctca 58700 Query: 672 tcac 675 |||| Sbjct: 58699 tcac 58696 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 381 ccatcgtccccatcgtcacctatatcatcatcctcgtccatctcatcatcaacatca 437 ||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 58978 ccatcctcaccatcatcacctatatcatcatcctcgtccatctcagcatcaacatca 58922 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 cgccttcatcttcatctgcattcacctc 376 |||||||||||||||| |||||| |||| Sbjct: 59028 cgccttcatcttcatcagcattcgcctc 59001
>dbj|AK107129.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C03, full insert sequence Length = 1555 Score = 107 bits (54), Expect = 5e-20 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 552 ccaccagaataggctctcgaataatctggaacctgctcttcctcatactcttcgtccatg 611 |||||||||||| |||| |||||||||||||||||||| || ||| || || |||||| Sbjct: 1013 ccaccagaatagcctctagaataatctggaacctgctcatc---atattcctcatccatg 957 Query: 612 ggctggccattttcctcattgtcttctgattgatctgattcggatccagagctgttctcg 671 || ||||||||||||||||| ||||||||||||||| | | |||||||| |||||||| Sbjct: 956 ggttggccattttcctcattatcttctgattgatctaactgagatccagaactgttctca 897 Query: 672 tcac 675 |||| Sbjct: 896 tcac 893 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 381 ccatcgtccccatcgtcacctatatcatcatcctcgtccatctcatcatcaacatca 437 ||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1175 ccatcctcaccatcatcacctatatcatcatcctcgtccatctcagcatcaacatca 1119 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 cgccttcatcttcatctgcattcacctc 376 |||||||||||||||| |||||| |||| Sbjct: 1225 cgccttcatcttcatcagcattcgcctc 1198
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/91 (87%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 552 ccaccagaataggctctcgaataatctggaacctgctcttcctcatactcttcgtccatg 611 |||||||||||| |||| |||||||||||||||||| || ||||| || || |||||| Sbjct: 88 ccaccagaatagcctctagaataatctggaacctgc---tcatcatattcctcatccatg 32 Query: 612 ggctggccattttcctcattgtcttctgatt 642 || ||||||||||||||||| |||||||||| Sbjct: 31 ggttggccattttcctcattatcttctgatt 1 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 381 ccatcgtccccatcgtcacctatatcatcatcctcgtccatctcatcatcaacatca 437 ||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 250 ccatcctcaccatcatcacctatatcatcatcctcgtccatctcagcatcaacatca 194 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 cgccttcatcttcatctgcattcacctc 376 |||||||||||||||| |||||| |||| Sbjct: 300 cgccttcatcttcatcagcattcgcctc 273
>ref|XM_954151.1| Neurospora crassa OR74A hypothetical protein (NCU06897.1) partial mRNA Length = 1071 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 405 tcatcatcctcgtccatctcatcatcaacatc 436 ||||||||||||||||||||||||||| |||| Sbjct: 932 tcatcatcctcgtccatctcatcatcagcatc 901 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 405 tcatcatcctcgtccatctcatcatcaacatc 436 ||||||||||||||||||||||||||| |||| Sbjct: 785 tcatcatcctcgtccatctcatcatcagcatc 754
>ref|XM_327182.1| Neurospora crassa OR74A hypothetical protein (NCU06897.1) partial mRNA Length = 1071 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 405 tcatcatcctcgtccatctcatcatcaacatc 436 ||||||||||||||||||||||||||| |||| Sbjct: 932 tcatcatcctcgtccatctcatcatcagcatc 901 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 405 tcatcatcctcgtccatctcatcatcaacatc 436 ||||||||||||||||||||||||||| |||| Sbjct: 785 tcatcatcctcgtccatctcatcatcagcatc 754
>gb|AY105437.1| Zea mays PCO132443 mRNA sequence Length = 618 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 606 tccatgggctggccattttcctcattgtcttctga 640 ||||||||||||||||||||||| || |||||||| Sbjct: 325 tccatgggctggccattttcctcgttatcttctga 291
>emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in linkage group 12, complete sequence Length = 218091 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 484 ccccttcagcatcttcatcatcatcctc 511 |||||||| ||||||||||||||||||| Sbjct: 66492 ccccttcatcatcttcatcatcatcctc 66465
>ref|XM_682677.1| PREDICTED: Danio rerio similar to MGC89524 protein (LOC559343), mRNA Length = 720 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 484 ccccttcagcatcttcatcatcatcctc 511 |||||||| ||||||||||||||||||| Sbjct: 460 ccccttcatcatcttcatcatcatcctc 433
>ref|XM_732047.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300148.00.0) partial mRNA Length = 780 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 493 catcttcatcatcatcctcggtctcatcatc 523 |||||||||||||||||||| ||||||||| Sbjct: 766 catcttcatcatcatcctcgtcctcatcatc 736
>ref|XM_792145.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein C14orf31 homolog (LOC592633), mRNA Length = 2067 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 493 catcttcatcatcatcctcggtctcatcatc 523 ||||||||||||||||||| | ||||||||| Sbjct: 1375 catcttcatcatcatcctctgcctcatcatc 1345
>gb|AY448015.1|AY448010S6 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR6 Length = 39512 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 498 tcatcatcatcctcggtctcat 519 |||||||||||||||||||||| Sbjct: 32413 tcatcatcatcctcggtctcat 32392
>emb|AL121969.12|HSJ214M20 Human DNA sequence from clone RP1-214M20 on chromosome 6p12.1-12.3 Contains the GSTA3 gene for glutathione S-transferase A3, a glutathione S-transferase A family pseudogene and the 3' end of the GSTA4 gene for glutathione S-transferase A4, complete sequence Length = 107429 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 615 tggccattttcctcattgtcttctga 640 |||||| ||||||||||||||||||| Sbjct: 42650 tggccactttcctcattgtcttctga 42625
>emb|BX033021.1|CNS08XN5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA49BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 826 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatc 508 |||||||||||||||||||||| Sbjct: 388 cttcagcatcttcatcatcatc 367
>emb|BX023374.1|CNS08Q76 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35CH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 724 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatc 508 |||||||||||||||||||||| Sbjct: 400 cttcagcatcttcatcatcatc 379
>gb|AC093454.3| Drosophila melanogaster 3L BAC RP98-23K2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168479 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 418 ccatctcatcatcaacatcagc 439 |||||||||||||||||||||| Sbjct: 39879 ccatctcatcatcaacatcagc 39900
>dbj|AK124041.1| Homo sapiens cDNA FLJ42047 fis, clone SPLEN2041645 Length = 2242 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 483 tccccttcagcatcttcatcatcatc 508 ||||| |||||||||||||||||||| Sbjct: 1201 tccccatcagcatcttcatcatcatc 1176
>gb|AC113432.2| Homo sapiens chromosome 5 clone RP11-92G2, complete sequence Length = 65596 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 483 tccccttcagcatcttcatcatcatc 508 ||||| |||||||||||||||||||| Sbjct: 34252 tccccatcagcatcttcatcatcatc 34227
>gb|AC021133.5| Homo sapiens chromosome 6 clone RP11-392A23, complete sequence Length = 204809 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 615 tggccattttcctcattgtcttctga 640 |||||| ||||||||||||||||||| Sbjct: 200488 tggccactttcctcattgtcttctga 200463
>gb|AC022034.7| Homo sapiens chromosome 8, clone RP11-400K9, complete sequence Length = 195768 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 615 tggccattttcctcattgtcttctga 640 ||||||||| |||||||||||||||| Sbjct: 70390 tggccatttccctcattgtcttctga 70365
>emb|BX815775.1|CNS0AARP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZB11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1722 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 atcatcctcgtccatctcatcatcaacatc 436 ||||||||| |||||||||||||| ||||| Sbjct: 291 atcatcctcatccatctcatcatccacatc 262
>gb|AE003528.3| Drosophila melanogaster chromosome 3L, section 57 of 83 of the complete sequence Length = 283815 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 418 ccatctcatcatcaacatcagc 439 |||||||||||||||||||||| Sbjct: 226512 ccatctcatcatcaacatcagc 226491
>ref|NM_116927.2| Arabidopsis thaliana unknown protein AT4G08580 mRNA, complete cds Length = 1587 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gcatcttcatcatcatcctcg 512 ||||||||||||||||||||| Sbjct: 461 gcatcttcatcatcatcctcg 441
>ref|NM_119266.1| Arabidopsis thaliana nucleotide binding AT4G31160 mRNA, complete cds Length = 5541 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctcggtctcatcatc 523 ||||| |||||||||| ||||| || ||||||||||| Sbjct: 5263 cttcatcatcttcatcttcatcttccgtctcatcatc 5227
>gb|BC085524.1| Danio rerio thrombospondin 3, mRNA (cDNA clone MGC:103461 IMAGE:7236709), complete cds Length = 3287 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 479 tccgtccccttcagcatcttcatca 503 ||||||||| ||||||||||||||| Sbjct: 1621 tccgtccccatcagcatcttcatca 1597
>ref|XM_636736.1| Dictyostelium discoideum hypothetical protein (DDB0205751), partial mRNA Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 1165 cttcatcatcttcatcatcatcctc 1141
>ref|XM_633747.1| Dictyostelium discoideum hypothetical protein (DDB0185786), partial mRNA Length = 2511 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 1034 cttcatcatcttcatcatcatcctc 1058
>gb|AC002983.1| Arabidopsis thaliana BAC T3F12 from chromosome IV near 24 cM, complete sequence Length = 107183 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gcatcttcatcatcatcctcg 512 ||||||||||||||||||||| Sbjct: 103121 gcatcttcatcatcatcctcg 103141
>ref|XM_362877.1| Magnaporthe grisea 70-15 predicted protein (MG08560.4) partial cds Length = 366 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 tcatcatcctcgtccatctca 425 ||||||||||||||||||||| Sbjct: 137 tcatcatcctcgtccatctca 117
>ref|XM_954757.1| Neurospora crassa OR74A hypothetical protein (NCU05859.1) partial mRNA Length = 2571 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 1904 cttcatcatcttcatcatcatcctc 1928
>ref|XM_325713.1| Neurospora crassa OR74A hypothetical protein (NCU05859.1) partial mRNA Length = 2571 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 1904 cttcatcatcttcatcatcatcctc 1928
>ref|XM_653727.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1215.2), mRNA Length = 1635 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 atcctcgtccatctcatcatc 430 ||||||||||||||||||||| Sbjct: 360 atcctcgtccatctcatcatc 340
>ref|XM_456116.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F23265g predicted mRNA Length = 2904 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 tcttcctcatactcttcgtcc 608 ||||||||||||||||||||| Sbjct: 59 tcttcctcatactcttcgtcc 39
>gb|AC144640.3| Carollia perspicillata clone 14D2, complete sequence Length = 116172 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 20829 cttcatcatcttcatcatcatcctc 20805
>ref|XM_811697.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509331.189) partial mRNA Length = 4443 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gagtatgaggttgcgccttca 356 ||||||||||||||||||||| Sbjct: 3445 gagtatgaggttgcgccttca 3465
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 tcttcctcatactcttcgtcc 608 ||||||||||||||||||||| Sbjct: 2173370 tcttcctcatactcttcgtcc 2173390
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctcggtctcatcatc 523 ||||| |||||||||| ||||| || ||||||||||| Sbjct: 108525 cttcatcatcttcatcttcatcttccgtctcatcatc 108489
>emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 24 Length = 199362 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gcatcttcatcatcatcctcg 512 ||||||||||||||||||||| Sbjct: 44058 gcatcttcatcatcatcctcg 44038
>gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107793 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ataaaattatactctgccttg 32 ||||||||||||||||||||| Sbjct: 93006 ataaaattatactctgccttg 93026
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 tcatcctcgtccatctcatcatcaacatc 436 |||||||||||||||||||| ||| |||| Sbjct: 957853 tcatcctcgtccatctcatcgtcatcatc 957825
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ttcatcttcatctgcattcac 373 ||||||||||||||||||||| Sbjct: 14998 ttcatcttcatctgcattcac 14978
>emb|BX827542.1|CNS0A2VP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1455 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gcatcttcatcatcatcctcg 512 ||||||||||||||||||||| Sbjct: 445 gcatcttcatcatcatcctcg 425
>ref|XM_243381.3| PREDICTED: Rattus norvegicus retrotransposon-like 1 (predicted) (Rtl1_predicted), mRNA Length = 4887 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 |||||| |||||||||||||||||| Sbjct: 1255 cttcagaatcttcatcatcatcctc 1231
>dbj|AK118434.1| Arabidopsis thaliana At4g31160 mRNA for unknown protein, complete cds, clone: RAFL19-68-F17 Length = 1232 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctcggtctcatcatc 523 ||||| |||||||||| ||||| || ||||||||||| Sbjct: 818 cttcatcatcttcatcttcatcttccgtctcatcatc 782
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ttcatcttcatctgcattcac 373 ||||||||||||||||||||| Sbjct: 322827 ttcatcttcatctgcattcac 322847
>emb|X55384.1|SCPUT3 S.cerevisiae PUT3 gene for proline utilization trans-activator Length = 4039 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 1516 cttcatcatcttcatcatcatcctc 1492
>emb|Z28015.1|SCYKL015W S.cerevisiae chromosome XI reading frame ORF YKL015w Length = 3629 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 1170 cttcatcatcttcatcatcatcctc 1146
>emb|X74152.1|SCPUKGA S.cerevisiae sequence for orfs homologous to ATP synthase D subunit, putative GTP-binding protein and PTU3 gene Length = 13194 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 8454 cttcatcatcttcatcatcatcctc 8478
>emb|AL157858.5|CNS01RGA Human chromosome 14 DNA sequence BAC R-187A6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188327 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaacccaccgagcaacagct 207 ||||||||||||||||||||| Sbjct: 5698 ccaacccaccgagcaacagct 5718
>gb|DQ332577.1| Synthetic construct Saccharomyces cerevisiae clone FLH202982.01X PUT3 gene, complete sequence Length = 2940 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 616 cttcatcatcttcatcatcatcctc 592
>gb|AF076275.1|T15F16 Arabidopsis thaliana BAC T15F16 Length = 97494 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gcatcttcatcatcatcctcg 512 ||||||||||||||||||||| Sbjct: 7857 gcatcttcatcatcatcctcg 7877
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cttcagcatcttcatcatcatcctc 511 ||||| ||||||||||||||||||| Sbjct: 837245 cttcatcatcttcatcatcatcctc 837221
>emb|AL732466.7| Mouse DNA sequence from clone RP23-149G14 on chromosome 2, complete sequence Length = 172535 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 493 catcttcatcatcatcctcggtctc 517 ||||||||||||||||||| ||||| Sbjct: 80484 catcttcatcatcatcctctgtctc 80460
>gb|AC155157.1| Medicago truncatula chromosome 2 BAC clone mth2-53f22, complete sequence Length = 129201 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ccttcatcttcatctgcatt 370 |||||||||||||||||||| Sbjct: 123451 ccttcatcttcatctgcatt 123432
>gb|AY735999.1| Aedes aegypti ADP ribosylation factor 79F mRNA, complete cds Length = 747 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ccatctcatcatcaacatca 437 |||||||||||||||||||| Sbjct: 660 ccatctcatcatcaacatca 641
>ref|NM_114227.4| Arabidopsis thaliana nucleic acid binding AT3G43590 mRNA, complete cds Length = 2107 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 1680 tcagcatcttcatcatcatc 1699
>ref|XM_633260.1| Dictyostelium discoideum developmental protein DG1094 (DDB0191387), partial mRNA Length = 3030 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcatcttcatctgcattcac 373 |||||||||||||||||||| Sbjct: 2464 tcatcttcatctgcattcac 2483
>ref|XM_628952.1| Dictyostelium discoideum hypothetical protein (DDB0219904), partial mRNA Length = 3786 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 1159 tcagcatcttcatcatcatc 1178
>ref|XM_470680.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1772 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 cctcgtccatctcatcatcaacat 435 |||||||||||||||| ||||||| Sbjct: 445 cctcgtccatctcatcctcaacat 422
>gb|AC102410.5| Mus musculus chromosome 18, clone RP24-369O1, complete sequence Length = 164142 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 99337 gccttcatcttcatctgcat 99318
>gb|AC005736.1| Homo sapiens chromosome 16, BAC clone 462G18 (LANL), complete sequence Length = 215441 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 agtaaactaacaaggcacac 98 |||||||||||||||||||| Sbjct: 31018 agtaaactaacaaggcacac 30999
>gb|AC005566.1| Homo sapiens chromosome 16, cosmid clone RT247 (LANL), complete sequence Length = 42616 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 agtaaactaacaaggcacac 98 |||||||||||||||||||| Sbjct: 25122 agtaaactaacaaggcacac 25103
>gb|AC004753.1| Homo sapiens chromosome 16, cosmid clone RT272 (LANL), complete sequence Length = 30652 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agtaaactaacaaggcacac 98 |||||||||||||||||||| Sbjct: 30157 agtaaactaacaaggcacac 30176
>ref|XM_952266.1| Neurospora crassa OR74A hypothetical protein (NCU06468.1) partial mRNA Length = 14979 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcgtccatctcatcatc 430 |||||||||||||||||||| Sbjct: 12605 tcctcgtccatctcatcatc 12586
>ref|XM_326322.1| Neurospora crassa OR74A hypothetical protein (NCU06468.1) partial mRNA Length = 14979 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcgtccatctcatcatc 430 |||||||||||||||||||| Sbjct: 12605 tcctcgtccatctcatcatc 12586
>gb|AY314982.1| Rattus norvegicus desmoglein 4 (Dsg4) mRNA, complete cds Length = 3123 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 2385 gccttcatcttcatctgcat 2366
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 cctcgtccatctcatcatcaacat 435 |||||||||||||||| ||||||| Sbjct: 14509630 cctcgtccatctcatcctcaacat 14509607
>ref|XM_824539.1| Trypanosoma brucei TREU927 AMP deaminase (Tb11.01.7390) partial mRNA Length = 4254 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 attcttcctcgtcgccctct 479 |||||||||||||||||||| Sbjct: 343 attcttcctcgtcgccctct 324
>ref|XM_751080.1| Ustilago maydis 521 hypothetical protein (UM00026.1) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 410 atcctcgtccatctcatcatcaacatca 437 |||||||||||| ||||||||| ||||| Sbjct: 510 atcctcgtccatgtcatcatcatcatca 483
>ref|XM_381222.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01046.1) partial mRNA Length = 2601 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 2488 tcagcatcttcatcatcatc 2469
>ref|XM_382637.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG02461.1) partial mRNA Length = 1011 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 tcaactccatcgtccccatcgtca 398 ||||||||| |||||||||||||| Sbjct: 419 tcaactccaccgtccccatcgtca 442
>emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 in linkage group 12, complete sequence Length = 156532 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 484 ccccttcagcatcttcatcatcatcctc 511 |||||||| ||||||||||||| ||||| Sbjct: 114034 ccccttcatcatcttcatcatcgtcctc 114061
>gb|AC121155.2| Homo sapiens BAC clone RP11-469P13 from 4, complete sequence Length = 92400 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 ggccattttcctcattgtct 635 |||||||||||||||||||| Sbjct: 17992 ggccattttcctcattgtct 18011
>emb|CR698351.2|CNS0G1SR Tetraodon nigroviridis full-length cDNA Length = 1269 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cttcagcatcttcatcatcatcct 510 ||||| |||||||||||||||||| Sbjct: 1146 cttcatcatcttcatcatcatcct 1169
>ref|XM_729434.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403809.00.0) partial mRNA Length = 520 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 332 tcagcatcttcatcatcatc 313
>ref|XM_736766.1| Plasmodium chabaudi chabaudi hypothetical protein (PC107236.00.0) partial mRNA Length = 1863 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 560 tcagcatcttcatcatcatc 541
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ccttcatcttcatctgcatt 370 |||||||||||||||||||| Sbjct: 904 ccttcatcttcatctgcatt 885
>emb|AL512328.15| Human DNA sequence from clone RP11-505D24 on chromosome 1 Contains the 5' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8), the 5' end of the CAPN9 gene for calpain 9 (nCL-4) and the 3' end of a variant of a novel gene, complete sequence Length = 55722 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gccattttcctcattgtctt 636 |||||||||||||||||||| Sbjct: 20349 gccattttcctcattgtctt 20330
>ref|XM_784392.1| PREDICTED: Strongylocentrotus purpuratus similar to nuclear protein localization 4 (LOC584532), mRNA Length = 1968 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 391 catcgtcacctatatcatcatcctcgtc 418 |||||||| || |||||||||||||||| Sbjct: 392 catcgtcatctttatcatcatcctcgtc 419
>ref|XM_793335.1| PREDICTED: Strongylocentrotus purpuratus similar to synaptojanin 1 (LOC593877), partial mRNA Length = 426 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cctcgtccatctcatcatca 431 |||||||||||||||||||| Sbjct: 301 cctcgtccatctcatcatca 282
>gb|AY191584.1| Mus musculus desmoglein 4 (Dsg4) mRNA, complete cds Length = 3478 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 2522 gccttcatcttcatctgcat 2503
>gb|AY227349.1| Mus musculus desmoglein 4 (Dsg4) mRNA, complete cds Length = 3126 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 2388 gccttcatcttcatctgcat 2369
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 cctcaactccatcgtccccatcgt 396 |||||||| ||||||||||||||| Sbjct: 2623584 cctcaacttcatcgtccccatcgt 2623607
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ctactacatataccaaccca 194 |||||||||||||||||||| Sbjct: 1185551 ctactacatataccaaccca 1185532
>gb|AC159974.7| Mus musculus chromosome 1, clone RP24-266D16, complete sequence Length = 158901 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 493 catcttcatcatcatcctcggtctcatcatcc 524 |||| ||||||||||||||| |||||||||| Sbjct: 156062 catcatcatcatcatcctcgtcctcatcatcc 156093
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 atcatcatcctcgtccatctcatcatca 431 |||||||||| | ||||||||||||||| Sbjct: 113270 atcatcatccacatccatctcatcatca 113297
>emb|AL391734.1|ATF22J12 Arabidopsis thaliana DNA chromosome 3, BAC clone F22J12 Length = 100231 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 70054 tcagcatcttcatcatcatc 70073
>gb|AC147881.2| Xenopus tropicalis clone CH216-115N11, complete sequence Length = 162394 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 492 gcatcttcatcatcatcctcggtctcatcatc 523 ||||| ||||||||||| |||| ||||||||| Sbjct: 161747 gcatcatcatcatcatcatcggcctcatcatc 161778
>emb|AL691484.14| Mouse DNA sequence from clone RP23-230C2 on chromosome 4 Contains the Atp6v1g1 gene for 13kD lysosomal H+ transporting ATPase V1 subunit G variant 1, four novel genes (including 1700018C11Rik), a ribosomal protein L35a (Rpl35a) pseudogene and two CpG islands, complete sequence Length = 116289 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 624 tcctcattgtcttctgattgatct 647 |||||||||| ||||||||||||| Sbjct: 5542 tcctcattgttttctgattgatct 5519
>gb|AC129415.1| Homo sapiens 3 BAC RP11-382L10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110116 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ataaaattatactctgcctt 31 |||||||||||||||||||| Sbjct: 44961 ataaaattatactctgcctt 44980
>gb|AC154090.19| Medicago truncatula clone mth2-92k14, complete sequence Length = 117932 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 tccccttcagcatcttcatc 502 |||||||||||||||||||| Sbjct: 8121 tccccttcagcatcttcatc 8102
>gb|AC009373.7| Drosophila melanogaster 3L BAC RP98-22B18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167630 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tcctcgtccatctcatcatc 430 |||||||||||||||||||| Sbjct: 107769 tcctcgtccatctcatcatc 107788
>gb|AY099824.1| Arabidopsis thaliana putative protein (At3g43590) mRNA, complete cds Length = 2105 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 1687 tcagcatcttcatcatcatc 1706
>ref|NM_176344.1| Drosophila melanogaster CG33051-RA (CG33051), mRNA Length = 636 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcgtccatctcatcatc 430 |||||||||||||||||||| Sbjct: 551 tcctcgtccatctcatcatc 532
>gb|AF474341.1| Dictyostelium discoideum ABC transporter ABCC.9 (abcC9) gene, complete cds Length = 8167 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcatcttcatctgcattcac 373 |||||||||||||||||||| Sbjct: 5229 tcatcttcatctgcattcac 5210
>gb|AC093853.3| Homo sapiens BAC clone RP11-502M1 from 4, complete sequence Length = 212207 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 ggccattttcctcattgtct 635 |||||||||||||||||||| Sbjct: 14608 ggccattttcctcattgtct 14627
>ref|NM_181564.2| Mus musculus desmoglein 4 (Dsg4), mRNA Length = 3478 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 2522 gccttcatcttcatctgcat 2503
>ref|NM_199490.1| Rattus norvegicus desmoglein 4 (Dsg4), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 2385 gccttcatcttcatctgcat 2366
>gb|AC092493.1|AC092493 Drosophila melanogaster, chromosome X, region 15C-15D, BAC clone BACR10J22, complete sequence Length = 157457 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 catcatcctcggtctcatca 521 |||||||||||||||||||| Sbjct: 47995 catcatcctcggtctcatca 48014
>gb|AC022347.2|AC022347 Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone BACR35G15, complete sequence Length = 168615 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 catcatcctcggtctcatca 521 |||||||||||||||||||| Sbjct: 140231 catcatcctcggtctcatca 140212
>gb|BT022974.1| Drosophila melanogaster IP08436 full insert cDNA Length = 735 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcgtccatctcatcatc 430 |||||||||||||||||||| Sbjct: 612 tcctcgtccatctcatcatc 593
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 cctcgtccatctcatcatcaacat 435 |||||||||||||||| ||||||| Sbjct: 14504605 cctcgtccatctcatcctcaacat 14504582
>gb|AC119038.4| Homo sapiens 3 BAC RP11-508O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175249 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 agtatgaggttgcgccttca 356 |||||||||||||||||||| Sbjct: 2390 agtatgaggttgcgccttca 2409
>gb|AC114783.5| Homo sapiens BAC clone RP11-600N14 from 2, complete sequence Length = 106643 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 cattttcctcattgtcttct 638 |||||||||||||||||||| Sbjct: 55299 cattttcctcattgtcttct 55280
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 cctcgtccatctcatcatcaacat 435 |||||||||||||||| ||||||| Sbjct: 31751 cctcgtccatctcatcctcaacat 31774
>gb|AF123281.1|AF123281 Pichia anomala nitrate assimilation gene cluster, complete sequence Length = 7580 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 4971 tcagcatcttcatcatcatc 4952
>gb|AC097449.3| Homo sapiens BAC clone CTD-2140E23 from 2, complete sequence Length = 104837 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 cattttcctcattgtcttct 638 |||||||||||||||||||| Sbjct: 53579 cattttcctcattgtcttct 53560
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cttgggcacattgtacttacacat 52 |||||||||| ||||||||||||| Sbjct: 113377 cttgggcacagtgtacttacacat 113400
>gb|AC009079.4|AC009079 Homo sapiens chromosome 16 clone RP11-340B7, complete sequence Length = 199851 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ccttcatcttcatctgcatt 370 |||||||||||||||||||| Sbjct: 94908 ccttcatcttcatctgcatt 94889
>gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, complete sequence Length = 208009 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cttgggcacattgtacttacacat 52 |||||||||| ||||||||||||| Sbjct: 8269 cttgggcacagtgtacttacacat 8292
>dbj|AK073312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K03, full insert sequence Length = 1873 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 cctcgtccatctcatcatcaacat 435 |||||||||||||||| ||||||| Sbjct: 557 cctcgtccatctcatcctcaacat 534
>gb|BT002203.1| Arabidopsis thaliana putative protein (At3g43590) mRNA, complete cds Length = 1700 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 1548 tcagcatcttcatcatcatc 1567
>dbj|AK064323.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F03, full insert sequence Length = 1481 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 cctcgtccatctcatcatcaacat 435 |||||||||||||||| ||||||| Sbjct: 575 cctcgtccatctcatcctcaacat 552
>gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, complete sequence Length = 154587 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 493 catcttcatcatcatcctcggtctcatcatcc 524 |||| ||||||||||||||| |||||||||| Sbjct: 119044 catcatcatcatcatcctcgtcctcatcatcc 119013
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tcctcgtccatctcatcatc 430 |||||||||||||||||||| Sbjct: 364972 tcctcgtccatctcatcatc 364991
>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete sequence Length = 314205 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 catcatcctcggtctcatca 521 |||||||||||||||||||| Sbjct: 306623 catcatcctcggtctcatca 306604
>gb|DQ073920.1| Penaeus monodon lymphoid organ expressed yellow head virus receptor protein mRNA, partial cds Length = 1585 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tcagcatcttcatcatcatc 508 |||||||||||||||||||| Sbjct: 1532 tcagcatcttcatcatcatc 1513
>gb|AF081586.1|AF081586 Dictyostelium discoideum developmental protein DG1094 (DG1094) gene, partial cds Length = 828 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcatcttcatctgcattcac 373 |||||||||||||||||||| Sbjct: 604 tcatcttcatctgcattcac 623
>gb|BC109009.1| Mus musculus cDNA clone MGC:124398 IMAGE:40048538, complete cds Length = 3407 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gccttcatcttcatctgcat 369 |||||||||||||||||||| Sbjct: 2522 gccttcatcttcatctgcat 2503
>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete sequence Length = 194045 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 caaacctgcctgctgtacta 177 |||||||||||||||||||| Sbjct: 117853 caaacctgcctgctgtacta 117834 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,135,070 Number of Sequences: 3902068 Number of extensions: 6135070 Number of successful extensions: 145783 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145314 Number of HSP's gapped (non-prelim): 464 length of query: 675 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 652 effective length of database: 17,143,297,704 effective search space: 11177430103008 effective search space used: 11177430103008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)