ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7m07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HSF_KLULA (P22121) Heat shock factor protein (HSF) (Heat shock t... 28 9.4

>HSF_KLULA (P22121) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 677

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 112 LRSNGCTERNDXKENMENVNXKTGEEYVXKN 20
           ++S      ND +   EN N K G+EY+ +N
Sbjct: 263 VKSGSMLSNNDSRWEFENENFKRGKEYLLEN 293


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,951,713
Number of Sequences: 219361
Number of extensions: 70932
Number of successful extensions: 115
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 80,573,946
effective HSP length: 12
effective length of database: 77,941,614
effective search space used: 1870598736
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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