ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29h20 |
|---|---|
| Clone Library Name | barley_pub |
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 35.0 bits (79), Expect = 0.046 Identities = 16/38 (42%), Positives = 27/38 (71%) Frame = -1 Query: 291 QDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAE 178 ++V +++++A+ C Q RPKMS+VV++LEG AE Sbjct: 533 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 570
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 31.2 bits (69), Expect = 0.66 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = -1 Query: 330 LIDKNSNDMLAHKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESNIDHNFVA 151 +ID D + ++ ++ L++ CL + K RP MS+VV LE + + I N Sbjct: 308 VIDNRLQDQYS-MEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSLNAAIGGNMDK 366 Query: 150 TNQ 142 T++ Sbjct: 367 TDR 369
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 31.2 bits (69), Expect = 0.66 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Frame = -1 Query: 348 NAHLV-DLIDKNSNDMLAHKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESN 172 N H V ++DK K E+ ++ + C++ D K RP M +VV+VLE N Sbjct: 316 NKHRVKQIMDKGIKGQYTTKV-ATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGL--N 372 Query: 171 IDHNFVATNQVNFGAAANVLSSVP 100 + N +T Q A AN S P Sbjct: 373 VVPNRSSTKQ----AVANSSRSSP 392
>MBHL_AZOCH (P18191) Uptake hydrogenase large subunit (EC 1.12.99.6)| (Hydrogenlyase) (Membrane-bound hydrogenase large subunit) Length = 601 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -1 Query: 249 QIDCKRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFG 130 Q+D R + D V +EG M E N+D N + TN V+ G Sbjct: 9 QLDKSGRRIVVDPVTRIEGHMRCEVNVDANNIITNAVSTG 48
>EPHA2_MOUSE (Q03145) Ephrin type-A receptor 2 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor ECK) (Epithelial cell kinase) (MPK-5) (SEK-2) Length = 977 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -1 Query: 276 IMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESNI 169 I +L M C Q + RRPK +D+V +L+ + A ++ Sbjct: 847 IYQLMMQCWQQERSRRPKFADIVSILDKLIRAPDSL 882
>EPHA2_HUMAN (P29317) Ephrin type-A receptor 2 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor ECK) (Epithelial cell kinase) Length = 976 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -1 Query: 276 IMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESNI 169 I +L M C Q + RRPK +D+V +L+ + A ++ Sbjct: 846 IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 881
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -1 Query: 339 LVDLIDKNSNDMLAHKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLE 196 L +ID D + ++ ++ LA+ CL + K RP M++VV LE Sbjct: 306 LFRVIDNRLQDQYS-MEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = -1 Query: 297 HKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESN 172 H + + ++++A+ CL+ RP M D+V+ LE + E+N Sbjct: 836 HAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENN 877
>MBHL_AZOVI (P21949) Uptake hydrogenase large subunit (EC 1.12.99.6)| (Hydrogenlyase) (Membrane-bound hydrogenase large subunit) (Hydrogenase alpha subunit) Length = 602 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -1 Query: 249 QIDCKRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFG 130 Q+D R + D V +EG M E N+D + V TN V+ G Sbjct: 9 QLDKSGRRIVVDPVTRIEGHMRCEVNVDASNVITNAVSTG 48
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = -1 Query: 297 HKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESN 172 H + + ++++A+ CL+ RP M D+V+ LE + E+N Sbjct: 835 HAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENN 876
>Y282_MYCTU (O53687) Hypothetical protein Rv0282/MT0295| Length = 631 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -1 Query: 270 KLAMWCLQIDCKRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFGAAANVLSSVPPLA 91 + A W + R + SDVVK+L +N + ++D F ++ G A L P Sbjct: 175 RAARWLAVVINYRAERWSDVVKLLTPMVN-DPDLDEAFSHAAKITLGTALARLGMFAPAL 233 Query: 90 SHVSGP 73 S++ P Sbjct: 234 SYLEEP 239
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -1 Query: 303 LAHKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLE 196 +A K + ++++AM CL +RP M DV+K L+ Sbjct: 1155 VALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -1 Query: 291 QDVIEIMKLAMWCLQIDCKRRPKMSDVVKVL 199 + V E + LA+ C + + +RP M DVVK L Sbjct: 1062 EQVTEALSLALRCAEKEVDKRPTMRDVVKQL 1092
>SP60_DICDI (P15270) Spore coat protein SP60 precursor| Length = 424 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Frame = -3 Query: 196 RYHECREQH*S*LCCHKSSEFRRCCK---CA----LLSSTSSFTCIRP 74 R +EC+ +H CC K + R CCK CA +++ C++P Sbjct: 220 RGYECKIKHDGSKCCVKRTPKRPCCKPNSCARDEKCVATKDRIICVKP 267
>TGA1A_TOBAC (P14232) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a)| (ASF-1 protein) Length = 359 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 205 FNYVGHFRPSFAINLQTPHCELHDLNYILLVC 300 F ++G FRPS + + TPH EL + VC Sbjct: 219 FMWIGGFRPSELLKVLTPHLELLTEQQLREVC 250
>TRA0_MYCSM (P35883) Transposase for insertion sequence element IS6120| Length = 323 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -1 Query: 243 DCKRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVN--FGAAANVLSSVPPLA 91 DCKRR + V+ + +G + + F AT + F ANVL+++P A Sbjct: 116 DCKRRGMTAPVLAIGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSA 168
>GR58B_DROME (Q9W2B1) Putative gustatory receptor 58b| Length = 408 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +3 Query: 9 HKNISCPAHNLIIWSRFSHFTWGLIHVKLEVELRRA 116 HK I ++LI W RF H T ++ K ++L+ + Sbjct: 106 HKIIQLYKYSLIYWKRFGHITRAIVDKKELLDLQES 141
>MBHL_OLICA (O33406) Uptake hydrogenase large subunit (EC 1.12.99.6)| (Hydrogenlyase) (Membrane-bound hydrogenase large subunit) Length = 603 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1 Query: 249 QIDCKRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFG 130 ++D R + D V +EG M E N+D N V N V+ G Sbjct: 10 KLDNSGRRVVVDPVTRIEGHMRCEVNVDSNNVIRNAVSTG 49
>CYSE_STAES (Q8CTU2) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 213 Score = 27.7 bits (60), Expect = 7.3 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = -1 Query: 237 KRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFGAAANVLSSVPPLASHVSGP 73 KR P + D V + G S I N + VN GA + VL SVP + V P Sbjct: 115 KRHPDIGDNVLIAAG-----SKILGNIKIESNVNIGANSVVLQSVPSYTTVVGIP 164
>CYSE_STAEQ (Q5HRM4) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 213 Score = 27.7 bits (60), Expect = 7.3 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = -1 Query: 237 KRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFGAAANVLSSVPPLASHVSGP 73 KR P + D V + G S I N + VN GA + VL SVP + V P Sbjct: 115 KRHPDIGDNVLIAAG-----SKILGNIKIESNVNIGANSVVLQSVPSYTTVVGIP 164
>VG50_BPMD2 (O64240) Putative adenosylcobalamin-dependent| ribonucleoside-triphosphate reductase (EC 1.17.4.2) (Gp50) Length = 693 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -1 Query: 345 AHLVDLIDKNSNDMLAHKQDVIEIMKL 265 A LVDLID + D +AHK+ V ++ ++ Sbjct: 180 AALVDLIDTHYRDDVAHKERVYDVSRV 206
>MBHL_RALEU (P31891) Uptake hydrogenase large subunit (EC 1.12.99.6)| (Hydrogenlyase) (Membrane-bound hydrogenase large subunit) Length = 617 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 246 IDCKRRPKMSDVVKVLEGTMNAESNIDHNFVATNQVNFG 130 +D + R + D V +EG M E N+D N V N V+ G Sbjct: 10 LDDRGRRIVVDPVTRIEGHMRCEVNVDANNVIRNAVSTG 48
>CO3_CAVPO (P12387) Complement C3 precursor [Contains: Complement C3 beta| chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b alpha' chain; Complement C3d fragment] Length = 1666 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -3 Query: 151 HKSSEFRRCCKCALLSSTSSFTCIR 77 +KS E RRCC+ + + F+C R Sbjct: 690 YKSKELRRCCEDGMRENPMQFSCQR 714
>SBCC_ECOLI (P13458) Exonuclease sbcC| Length = 1048 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 22/74 (29%) Frame = +3 Query: 15 NISCPAHNLII-WSRFSHFTWGLIHVKLEVE---------------------LRRAHLQQ 128 +++ PA NL W R + + L H++ ++E + A LQQ Sbjct: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Query: 129 RRNSLDLWQQSYDQ 170 ++ SL+ W Q +D+ Sbjct: 344 QQQSLNTWLQEHDR 357
>GLMS_PASMU (P57963) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 609 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = -1 Query: 345 AHLVDLIDKNSNDMLAHKQDVIEIMKLAMWCLQIDCKRRPKMSDVVKVLEGT-MNAESNI 169 AHLV + +N +L Q V++ +K A + +DC+ + + +V G+ + I Sbjct: 128 AHLVHWVMRNETSLLRAVQQVVKQLKGAYGMVVMDCE---QPNHLVAARSGSPLVIGLGI 184 Query: 168 DHNFVATNQV 139 NF+A++Q+ Sbjct: 185 GENFLASDQL 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,772,618 Number of Sequences: 219361 Number of extensions: 853028 Number of successful extensions: 2382 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2381 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
