>H5_ANSAN (P02258) Histone H5|
          Length = 193

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
 Frame = -3

Query: 531 RAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAIS-------------GDTQPKKRG 391
           + +K K   + RK +    + S  PKK  RPRK R+ +                 PKK  
Sbjct: 98  KGDKAKRSPAGRKKKKKAARKSTSPKKAARPRKARSPAKKPKAAARKARKKSRASPKKAK 157

Query: 390 RPRKDRAISGDTQPKKKGQASK 325
           +P+  +A S  T   KK + SK
Sbjct: 158 KPKTVKAKSLKTSKPKKARRSK 179

>BAR2_CHITE (P02851) Balbiani ring protein 2 (Giant secretory protein I-B)|
           (GSP-IB) (Fragment)
          Length = 210

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = -3

Query: 507 SSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPKKKGQAS 328
           +SKR T     KPS +P K  +P K    S  ++P K  +P K    S  ++P+K G A 
Sbjct: 50  NSKRCTCTSVGKPS-KPSKHSKPSKHSKPSKHSKPSKHSKPSKHSKPSKHSKPEKCGSAM 108

Query: 327 K 325
           K
Sbjct: 109 K 109



 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = -3

Query: 507 SSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPKKKGQAS 328
           +SKR T     KPS +P K  +P K    S  ++P K  +P K       ++P+K G A 
Sbjct: 124 NSKRCTCTSVGKPS-KPSKHSKPSKHSKPSKHSKPSKHSKPSK------HSKPEKCGSAM 176

Query: 327 K 325
           K
Sbjct: 177 K 177

>AAC2_DICDI (P14196) AAC-rich mRNA clone AAC11 protein (Fragment)|
          Length = 448

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 13/52 (25%)
 Frame = -1

Query: 347 KKRGRPRKDRA-------------ISGDTQPKKRGRPPKEKNISESSVHKRN 231
           KKRGRP+K +               + D  PKKRGRPPK K  S S+    N
Sbjct: 209 KKRGRPKKPKDENESDYNNTSFSDSNTDGTPKKRGRPPKAKGESPSASPTHN 260



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 16/58 (27%)
 Frame = -3

Query: 474 KPSDQP---KKRGRPRKDRA-------------ISGDTQPKKRGRPRKDRAISGDTQP 349
           KP  QP   KKRGRP+K +               + D  PKKRGRP K +  S    P
Sbjct: 200 KPVPQPGSNKKRGRPKKPKDENESDYNNTSFSDSNTDGTPKKRGRPPKAKGESPSASP 257

>HMGA2_HUMAN (P52926) High mobility group protein HMGI-C (High mobility group|
           AT-hook protein 2)
          Length = 109

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -3

Query: 471 PSDQPKKRGRPRK-DRAISGDTQPKK-RGRPRKDRAISGDTQPKKKGQAS 328
           P+ Q + RGRPRK  +  +G+  PK+ RGRP+  +  S     +KK +A+
Sbjct: 22  PAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKKAEAT 71

>H5_CAIMO (P06513) Histone H5|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
 Frame = -3

Query: 531 RAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAIS-------------GDTQPKKRG 391
           + +K K   + RK +    + S  P+K  RPRK R+ +                 PKK  
Sbjct: 98  KGDKAKKSPAGRKKKKKAARRSTSPRKAARPRKARSPAKKPKAAARKARKKSRASPKKAK 157

Query: 390 RPRKDRAISGDTQPKKKGQASK 325
           +P+  +A S  T   KK + SK
Sbjct: 158 KPKTVKAKSLKTSKVKKAKRSK 179

>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1|
           light chain LC1]
          Length = 2468

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = -3

Query: 531 RAEKLKMQSSKRKT--EDVCVKPSDQPKKRGRPRKDRAISGDTQP-KKRGRPRKD 376
           +A  +K +++K KT  ++  VKP D+ +++ +P+K+ A   D  P KK  +P+K+
Sbjct: 624 QATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKE 678

>YM8H_YEAST (Q03525) Uncharacterized protein YMR269W|
          Length = 211

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
 Frame = -3

Query: 528 AEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPK-----------KRGRPR 382
           A   K +  +R+ ED      D   KR + +KD+  S D++ K           K+G+  
Sbjct: 122 ASSSKGKKRRRRDED------DNKVKRKKLKKDKKTSNDSESKKKKKKKSKKESKKGKKS 175

Query: 381 KDRAISGDTQPKKKGQASK 325
           K  +  GD    KK + SK
Sbjct: 176 KHSSDEGDKSKHKKSKKSK 194



 Score = 28.1 bits (61), Expect(2) = 0.79
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -3

Query: 534 VRAEKLK---MQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAIS 364
           V+ E LK       K++     V  +   K + R R+D     D    KR + +KD+  S
Sbjct: 97  VKGEGLKGTITNLGKKEEASFVVSSASSSKGKKRRRRDE----DDNKVKRKKLKKDKKTS 152

Query: 363 GDTQPKKK 340
            D++ KKK
Sbjct: 153 NDSESKKK 160



 Score = 23.9 bits (50), Expect(2) = 0.79
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -1

Query: 344 KRGRPRKDRAISGDTQPKKRGRPPKEKNISESSVHKRNAETV 219
           K+G+  K  +  GD    K+ +  K+    ESS  +   E +
Sbjct: 170 KKGKKSKHSSDEGDKSKHKKSKKSKKHKKEESSARRDRKEHI 211

>VPM_BPP2 (P25476) Terminase, endonuclease subunit (GpM)|
          Length = 247

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
 Frame = -3

Query: 543 AETVRAEKLKMQSSKRKT-----EDVCVKPSDQPKKRGR-PRKDRAISGDTQPKKRGRPR 382
           A   RA +L  Q+  +K       ++  KP  QPK   R PRK R+++    P KRGRP+
Sbjct: 188 AHLQRATQLDCQAGVKKEIERLERELKPKPEPQPKAATRAPRKTRSVT----PAKRGRPK 243

Query: 381 K 379
           K
Sbjct: 244 K 244

>SWI5_YEAST (P08153) Transcriptional factor SWI5|
          Length = 709

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -3

Query: 507 SSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKK 397
           S  +K E+V +K S  P+KRGRPRKD   S  + P K
Sbjct: 633 SGGKKYENVVIKRS--PRKRGRPRKDGTSSVSSSPIK 667

>HMGA2_MOUSE (P52927) High mobility group protein HMGI-C (High mobility group|
           AT-hook protein 2)
          Length = 108

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 341 RGRPRKDRAI-SGDTQPKK-RGRPPKEKNISESSVHKRNAETV 219
           RGRPRK +   + +  PK+ RGRP   KN S S   ++ AET+
Sbjct: 29  RGRPRKQQQEPTCEPSPKRPRGRPKGSKNKSPSKAAQKKAETI 71

>CPD1_DROME (P22058) Chromosomal protein D1|
          Length = 355

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 362 VTLNLKKRGRPRKDRAISGDTQPKKRGRPPKEKNI 258
           ++  +KKRGRP K++  SG     +RGRPPK   I
Sbjct: 29  ISPGIKKRGRPAKNKGSSGG--GGQRGRPPKASKI 61



 Score = 31.2 bits (69), Expect = 3.2
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
 Frame = -1

Query: 362 VTLNLKKRGR----PRKDRAI--SGDTQP---KKRGRPPKEKNISESS 246
           V LN+ + GR    P+K RA+  +GD +P   KKRGRPP+ K+ S  S
Sbjct: 165 VNLNISRTGRGLGRPKK-RAVESNGDGEPQVPKKRGRPPQNKSGSGGS 211

>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)|
          Length = 540

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -3

Query: 510 QSSKRK-TEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPKKKGQ 334
           +S KRK T+DV +K +++  K+ +  KD+    D + KK  + +K++    +   KK  +
Sbjct: 5   ESKKRKLTDDVAIKQNEKKIKKDKKVKDKKDKKDKKDKKDKKEKKEKKEKKEKNDKKDKK 64

Query: 333 ASK 325
             K
Sbjct: 65  DKK 67

>ORC4_SCHPO (Q9Y794) Origin recognition complex subunit 4|
          Length = 972

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
 Frame = -1

Query: 347 KKRGRPRK--DRAISGDTQP---KKRGRPPKEKNISESS 246
           ++RGRPRK   + I   ++P   +KRGRPPK K+ S S+
Sbjct: 101 RRRGRPRKYPPKPIDEGSEPIIKRKRGRPPKIKSSSPST 139



 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
 Frame = -3

Query: 468 SDQPKKRGRPRK--DRAISGDTQP---KKRGRPRKDRAISGDTQ 352
           ++ P++RGRPRK   + I   ++P   +KRGRP K ++ S  T+
Sbjct: 97  NEAPRRRGRPRKYPPKPIDEGSEPIIKRKRGRPPKIKSSSPSTK 140

>HSP1_MURBR (P83211) Sperm protamine P1 precursor|
          Length = 107

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -3

Query: 474 KPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPKKKGQASKG 322
           K   + K +G+ R+ R   G  + KK+G+ R+ R   G    K+KG+  KG
Sbjct: 47  KAKGKGKGKGKRRRRRKGKGKGKGKKKGKGRRRRCRRGRGCKKRKGKKGKG 97

>CU070_MOUSE (P58468) Protein C21orf70 homolog|
          Length = 219

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -1

Query: 467 VISLKKGAGLERIELYQVTLNLKKGAGLERIELYQVTLNLKKRGRPRKDRAISGDTQPKK 288
           V+SLK+GA  + I   +  L L++   L++IE  ++     +  R RK   + GD  P +
Sbjct: 77  VVSLKRGAEPKAILPKKEKLKLRRERWLQKIEAIKLAEQKLREERKRKAMVVVGDLHPLR 136

Query: 287 RGRP 276
              P
Sbjct: 137 DALP 140

>YKI5_CAEEL (P46012) Hypothetical protein C01G6.5|
          Length = 952

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -3

Query: 510 QSSKRKTEDVCVKPSDQ--PKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPKKKG 337
           +SSKRK +D   +   Q          +D   SGD   K+R + R+   I   T  KK G
Sbjct: 724 ESSKRKQKDTSSRKMKQLDESSADSDSEDDGRSGDKSTKRRDKARRSTRIGKSTPAKKVG 783

Query: 336 QASK 325
           +  K
Sbjct: 784 KKEK 787

>CWC25_CRYNE (Q5KIP8) Pre-mRNA-splicing factor CWC25|
          Length = 434

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -3

Query: 531 RAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPR-KDRAISGDTQPKKRGRPRKDRAISGDT 355
           RAEK + + SK +  D    PSD    R   R +D   S D + ++  R R DR+ +   
Sbjct: 191 RAEKEERRKSKHRYHDSRSPPSDYYDDRDHRRHRDSYDSQDRENRRTYRDRSDRSRTRSE 250

Query: 354 QPKKK 340
            PK++
Sbjct: 251 SPKRE 255

>PRH_PETCR (P48786) Pathogenesis-related homeodomain protein (PRHP)|
          Length = 1088

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 3/153 (1%)
 Frame = -1

Query: 590 QRTHHYQGCFSRPHQMQRLSGQKN*RCRAPKEKLKMYV*NLVISLKKGAGLERIELYQVT 411
           Q  H           ++ + GQKN   ++P +        LV + K+G G  R       
Sbjct: 192 QLGHRSDDAIKNSGLVELVIGQKN-VAKSPSQ--------LVETGKRGRGRPR------- 235

Query: 410 LNLKKGAGLERIELYQVTLNLKKRGRPRKDRAISGDTQPKKRGRPPKEKNISES---SVH 240
              K   GLE++ + Q T          K  +  GDT  + RGRP K +N   S   +++
Sbjct: 236 ---KVQTGLEQLVIGQKTA--------AKSSSQLGDTGKRSRGRPRKVQNSPTSFLENIN 284

Query: 239 KRNAETVRAEKLKRESLRVQGA*PNNQSHCYNT 141
               ET+  +  +   L       +NQS  YN+
Sbjct: 285 MEQKETIPEQVTQNSILESLTIPTDNQSRTYNS 317

>H5_CHICK (P02259) Histone H5|
          Length = 189

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
 Frame = -3

Query: 531 RAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAIS-------------GDTQPKKRG 391
           +++K K    K+K     V+ S  PKK  RPRK R+ +                 PKK  
Sbjct: 97  KSDKAKRSPGKKKK---AVRRSTSPKKAARPRKARSPAKKPKATARKARKKSRASPKKAK 153

Query: 390 RPRKDRAISGDTQPKKKGQASK 325
           +P+  +A S      KK + SK
Sbjct: 154 KPKTVKAKSRKASKAKKVKRSK 175

>H12_VOLCA (Q08865) Histone H1-II|
          Length = 240

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -3

Query: 516 KMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPR--KDRAISGDTQPK- 346
           K+  +++       KP   PKK   P+K  A      PKK G  +  K ++     +PK 
Sbjct: 91  KLSDAQKSKAKAAAKPKAAPKKAAAPKKAAAPKKAKAPKKEGEKKAVKPKSEKKAAKPKT 150

Query: 345 -KKGQASK 325
            KK +A+K
Sbjct: 151 EKKPKAAK 158

>HIRA_CHICK (P79987) HIRA protein (TUP1-like enhancer of split protein 1)|
           (CHIRA)
          Length = 1018

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -3

Query: 546 NAETVRAEKLKMQS--SKRKTEDVCVKPSDQPKK------RGRPRKDRAISGDT-QPKKR 394
           N      ++LK Q+   + K +D+    SD  +K         P++   + G+T + KK+
Sbjct: 588 NTNQTVVDRLKDQNFIKENKPKDILESSSDSEEKIPVAKPLSAPKRKLELEGETVEKKKK 647

Query: 393 GRPRKD 376
           GRPRKD
Sbjct: 648 GRPRKD 653

>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)|
          Length = 504

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -3

Query: 522 KLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDR 373
           K +++  KRK ED  +K   + KK  + +KD+    D + KK  + +K++
Sbjct: 3   KDELKDKKRKVEDEELKSKKKLKKDKKDKKDKKDKKDKKDKKEKKEKKEK 52

>RPOA_EUGAN (Q8SL94) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase alpha subunit) (RNA
           polymerase alpha subunit)
          Length = 207

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = -2

Query: 331 LERIELYQVTLNLKKEA---DLQKKRTYLRVVFISAMQRLSGQKN*REKACVFKGHNLTI 161
           LER+++  V  NLKK+     L K+ ++ + ++ +   ++S   N  +K C  K HN+ I
Sbjct: 92  LERLKIKLVNKNLKKKIICITLTKENSFFKEIYKTI--KIS---NLNQKICTIKSHNVEI 146

Query: 160 NLTVTIQ 140
            L + I+
Sbjct: 147 KLLLKIE 153

>YR871_MIMIV (Q5UP41) Hypothetical protein R871|
          Length = 561

 Score = 25.4 bits (54), Expect(2) = 5.4
 Identities = 19/80 (23%), Positives = 30/80 (37%)
 Frame = -3

Query: 597 QQSKNXXXXXXXXXXXSNAETVRAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAIS 418
           + SK             +  + R +  K   S +K +    K    P       +DR+ S
Sbjct: 141 KSSKKHKSSKKHKSSKHDKSSKRDKSSKRHKSHKKKDKSHKKRYRSPSSDRSLSRDRSSS 200

Query: 417 GDTQPKKRGRPRKDRAISGD 358
            D   KKR    +DR++S D
Sbjct: 201 RDRSYKKRRLYSRDRSLSRD 220



 Score = 23.5 bits (49), Expect(2) = 5.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 326 KDRAISGDTQPKKRGRPPKEKNISESSVHKRN 231
           +DR++S D    +   PP+++++S      RN
Sbjct: 219 RDRSLSRDRSLSRDRSPPRDRSLSRDRSPPRN 250

>BXDC1_HUMAN (Q9H7B2) Brix domain-containing protein 1|
          Length = 306

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
 Frame = -1

Query: 488 KMYV*NLVISLKK-GAGLERIELYQVTLNLK---KGAGLERIELYQVTLNLKKRGRPRKD 321
           K+Y  +  + LKK G    RIEL ++  +L    +   L   +LY++++ + K  +P+K 
Sbjct: 192 KIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPKALKPKKK 251

Query: 320 RAISGDTQPKKRGRPPKEK-NISE------SSVHKRNAETVRAEKLKRESLRVQ 180
           + IS DT     GR   +K ++S+        + KR AE +  E  +++S R++
Sbjct: 252 KNISHDTFGTTYGRIHMQKQDLSKLQTRKMKGLKKRPAERI-TEDHEKKSKRIK 304

>H11_ARATH (P26568) Histone H1.1|
          Length = 274

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = -3

Query: 543 AETVRAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAIS 364
           A+   A K K  ++K+ T     KP   P+      K +A+  D +PK + RP K    +
Sbjct: 170 AKKTIAVKPKTAAAKKVTAKAKAKPV--PRATAAATKRKAV--DAKPKAKARPAKAAKTA 225

Query: 363 GDTQPKKKGQAS 328
             T P KK  A+
Sbjct: 226 KVTSPAKKAVAA 237

>3F_DICDI (P13475) 3F protein precursor (Fragment)|
          Length = 215

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 15/67 (22%), Positives = 28/67 (41%)
 Frame = -3

Query: 525 EKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPK 346
           ++LK  +    TE+    P+ Q  ++G P+ D   +      K   P+ D   +      
Sbjct: 118 DRLKDNADAANTENAQKSPNTQSTQKGSPKSDAKEASPKTDAKEASPKSDAKEASPKTDT 177

Query: 345 KKGQASK 325
           K+G + K
Sbjct: 178 KQGSSPK 184

>ORC1_YEAST (P54784) Origin recognition complex subunit 1 (Origin recognition|
           complex protein 120 kDa subunit)
          Length = 914

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
 Frame = -3

Query: 534 VRAEKLKMQSSKRKTEDVCVKPS---DQPKKRGRPRK----DRAISGDTQPKKRGRPRKD 376
           + A++L+ +  + + ED   K +   + P+KRGR  K    D   S    PKKRGR  KD
Sbjct: 277 ISADELEEEEDEEEDEDEEEKEARHTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKD 336

>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = -3

Query: 510  QSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPKKKGQA 331
            +SSK+ ++   V P  QP   G PRK+   +  ++PKK+  P  +   SG  Q K+K  A
Sbjct: 1293 KSSKQVSQPALVIPP-QPPTTGPPRKEVPKTTPSEPKKKQPPPPE---SGPEQSKQKKVA 1348

Query: 330  SK 325
             +
Sbjct: 1349 PR 1350

>41_DROME (Q9V8R9) Protein 4.1 homolog (Protein coracle)|
          Length = 1698

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/75 (28%), Positives = 32/75 (42%)
 Frame = -3

Query: 546 NAETVRAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAI 367
           NA    AEKLK      +T+D   +    PK R +  +D  +S  T+ K +G      A+
Sbjct: 617 NALKETAEKLKAGQLSPRTQDKLNRGQLSPKSRAKLLQDPLLSPTTRAKLQGSAVDAAAV 676

Query: 366 SGDTQPKKKGQASKG 322
                 K+    +KG
Sbjct: 677 PLSDSQKRSYSPTKG 691

>YQFQ_BACSU (P54474) Hypothetical protein yqfQ|
          Length = 247

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
 Frame = -3

Query: 546 NAETVRAEKLKMQS----SKRKTEDVCVKPSD-----QPKKRGRPRKDRAISGDTQPKKR 394
           + ET   E+ + QS    S  K ++   K SD     +PK    P+K +      Q  K 
Sbjct: 162 DTETEANEESEKQSVSEESSEKEKETETKTSDGNKKSKPKSSSLPKKSKTTDNKEQELKT 221

Query: 393 GRPRKDRAISGDTQPKKKGQASKG*SYI 310
             P+K  A S    PK+   +SK   YI
Sbjct: 222 SAPKKKEAAS--PAPKRTSGSSKPRLYI 247

>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1387

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
 Frame = -3

Query: 693 KHQNPDYRLKVARSSQGTNVASNQMVVRAVNGQQSKNXXXXXXXXXXXSNAETVRAEKLK 514
           K ++   R K A ++  T+  SN+ V  A NG +  +           S+    R ++  
Sbjct: 247 KVEHKSRRRKPAATTSTTD-DSNKAVAAAANGTKDHSATAGTTASANGSDTPDRRHQRQS 305

Query: 513 MQSS-----KRKTEDVCVKPSDQPKKRGRPR-KDRAISGDTQPKKRGRPRKDRAISGDTQ 352
            + S     K KTE     P  QP++  RP+ K +A   + +   +            TQ
Sbjct: 306 SKPSTPILIKPKTEPGKGSPEIQPRRSSRPKVKRKAFEDELETADK---------QSSTQ 356

Query: 351 PKKKGQASKG 322
             KK Q S G
Sbjct: 357 QVKKSQESTG 366

>HMGN2_MOUSE (P09602) Nonhistone chromosomal protein HMG-17 (High-mobility group|
           nucleosome-binding domain-containing protein 2)
          Length = 89

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -3

Query: 501 KRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGDTQPK-KKGQASK 325
           KRK E        + K   + R  R  +    PK   +P+K  A  G+  PK KKG+A  
Sbjct: 2   KRKAEGDAKGDKTKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADA 61

Query: 324 G 322
           G
Sbjct: 62  G 62

>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3|
           homolog (Histone-lysine N-methyltransferase, H3 lysine-4
           specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 347 KKRGRPRKDRAIS---GDTQPKKRGRPPKEKNISESSVHKRNAETVRAEKLKRES 192
           + RGRPRKD A        +P+ RG+   E   S   +     ET+   ++K +S
Sbjct: 35  RPRGRPRKDGASPFQRARKKPRSRGKTAVEDEDSMDGLETTETETIVETEIKEQS 89

>H12_GLYBA (P40264) Histone H1-II|
          Length = 232

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = -3

Query: 528 AEKLKMQSSKRKTEDVCVKPSDQ---PKKRGRPRKDRAISGDTQPKKRGRPRKDRAISGD 358
           A K+K   +K   +   VKP+ +   PK +  P+   A     +PKK  +P+K  A    
Sbjct: 159 ATKVKKPVAKSTKKQAAVKPAAKKAAPKPKAVPKPKAA-----KPKKEAKPKKAAAPKAA 213

Query: 357 TQP-KKKGQASK 325
            +P +KK +A+K
Sbjct: 214 KKPAQKKPKATK 225

>CN102_MOUSE (Q80XC6) Protein C14orf102 homolog|
          Length = 1172

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/69 (26%), Positives = 31/69 (44%)
 Frame = -3

Query: 546 NAETVRAEKLKMQSSKRKTEDVCVKPSDQPKKRGRPRKDRAISGDTQPKKRGRPRKDRAI 367
           + E+  +EKL   S K+K E    +     +K  R  +  + SG     + G+ R  R+I
Sbjct: 71  SGESNTSEKLAQTSRKKKKEKKKRRKHQHHRKTKRRHEQLSSSGSESDTEAGKDRASRSI 130

Query: 366 SGDTQPKKK 340
             D +  +K
Sbjct: 131 RDDQKEAEK 139

>ORC2_YEAST (P32833) Origin recognition complex subunit 2 (Origin recognition|
           complex protein 71 kDa subunit)
          Length = 620

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
 Frame = -3

Query: 525 EKLKMQSSKRK--TEDVCVKP---SDQPKKRGRPRK------DRAISGDTQPKKRGRPRK 379
           E++ +  ++RK  + D  +KP   S  P+KRGRPRK      DR    +       + RK
Sbjct: 48  ERISLVGNERKNTSPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRK 107

Query: 378 -DRAISGDTQPKKKGQASK 325
            D+  SG+   + K   +K
Sbjct: 108 LDKDTSGNVNEESKTSNNK 126

>RL22_MYCSM (O06115) 50S ribosomal protein L22|
          Length = 153

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 24/112 (21%), Positives = 46/112 (41%)
 Frame = -1

Query: 509 RAPKEKLKMYV*NLVISLKKGAGLERIELYQVTLNLKKGAGLERIELYQVTLNLKKRGRP 330
           +A  E +   + +   + +   GL+   L   T+   +G   +RI         + +GR 
Sbjct: 48  QAASEPVAKVIASAAANAQNNEGLDPSTLVVATVYADEGPTAKRIRP-------RAQGRA 100

Query: 329 RKDRAISGDTQPKKRGRPPKEKNISESSVHKRNAETVRAEKLKRESLRVQGA 174
            + R  +         RPPK+K  S +S   R A+  +A   K+ +   +G+
Sbjct: 101 FRIRKRTSHITVIVESRPPKQKGASAASARSRRAQGSKAAATKKSAETKEGS 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,279,385
Number of Sequences: 219361
Number of extensions: 1716952
Number of successful extensions: 5717
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5610
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)