>gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complete sequence
          Length = 197633

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 149   aaatggaataaattgttttaagta 172
             ||||||||||||||||||||||||
Sbjct: 90563 aaatggaataaattgttttaagta 90586

>emb|AL390060.14| Human DNA sequence from clone RP11-56H2 on chromosome Xp11.22-11.3
             Contains a pseudogene similar to part of p30 (nuclear
             protein p30), a novel gene and a CpG island, complete
             sequence
          Length = 135378

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    aacaaaatatggtggggaaaaa 100
             ||||||||||||||||||||||
Sbjct: 86283 aacaaaatatggtggggaaaaa 86304

>gb|AC021118.6| Homo sapiens BAC clone RP11-332D24 from 4, complete sequence
          Length = 194612

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 153   ggaataaattgttttaagtact 174
             ||||||||||||||||||||||
Sbjct: 14751 ggaataaattgttttaagtact 14730

>gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, complete sequence
          Length = 218515

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   aggcaaatgtagcatcagaaa 269
             |||||||||||||||||||||
Sbjct: 45370 aggcaaatgtagcatcagaaa 45350

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 90      gtggggaaaaagaaatgcatg 110
               |||||||||||||||||||||
Sbjct: 2214605 gtggggaaaaagaaatgcatg 2214585

>emb|AL731602.3|OSJN00251 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059H15,
              complete sequence
          Length = 149181

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     gtggggaaaaagaaatgcatg 110
              |||||||||||||||||||||
Sbjct: 129233 gtggggaaaaagaaatgcatg 129213

>gb|AC122134.4| Homo sapiens BAC clone RP11-309M7 from 2, complete sequence
          Length = 15049

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    caaggaacacactggagatgc 60
             |||||||||||||||||||||
Sbjct: 11285 caaggaacacactggagatgc 11265

>gb|AF186997.6| Homo sapiens chromosome 8 clone CTA-398F10 map p22-p21, complete
             sequence
          Length = 162504

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaaaagaaatgcatgggggca 116
             |||||||||||||||||||||
Sbjct: 73833 aaaaagaaatgcatgggggca 73813

>gb|AC103957.8| Homo sapiens chromosome 8, clone CTA-398F10, complete sequence
          Length = 162398

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaaaagaaatgcatgggggca 116
             |||||||||||||||||||||
Sbjct: 88673 aaaaagaaatgcatgggggca 88693

>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17,
             complete sequence
          Length = 163376

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    gtggggaaaaagaaatgcatg 110
             |||||||||||||||||||||
Sbjct: 39612 gtggggaaaaagaaatgcatg 39592

>dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034a,
             complete sequence
          Length = 83232

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    caagagaaacaaaatatggtg 92
             |||||||||||||||||||||
Sbjct: 15547 caagagaaacaaaatatggtg 15567

>gb|AC127573.4| Mus musculus BAC clone RP24-231H7 from chromosome 9, complete sequence
          Length = 148263

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    caaggaacacactggagatg 59
             ||||||||||||||||||||
Sbjct: 66160 caaggaacacactggagatg 66141

>gb|AC111647.10| Rattus norvegicus 4 BAC CH230-103E9 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 232538

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   aaaagaaatgcatgggggca 116
            ||||||||||||||||||||
Sbjct: 5210 aaaagaaatgcatgggggca 5191

>emb|AL590639.9| Human DNA sequence from clone RP11-496H15 on chromosome 1 Contains the
             3' end of the gene for retinoid binding protein 7
             (CRBPIV), the 5' end of the UBE4B gene for ubiquitination
             factor E4B (UFD2 homolog, yeast), a pseudogene similar to
             part of ribosomal protein L21 (RPL21) and a pseudogene
             similar to part of phosphoglycerate mutase, complete
             sequence
          Length = 96075

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ccaagagaaacaaaatatgg 90
             ||||||||||||||||||||
Sbjct: 46651 ccaagagaaacaaaatatgg 46632

>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24
             Contains part of a novel gene similar to human DECR2
             (peroxisomal 2,4-dienoyl CoA reductase 2),  a novel gene
             similar to human KIAA0665, a novel gene similar to human
             KIAA0683, a novel gene similar to human KIAA0590, part of
             a novel gene and three CpG islands, complete sequence
          Length = 161218

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ttccaagagaaacaaaatat 88
             ||||||||||||||||||||
Sbjct: 22579 ttccaagagaaacaaaatat 22560

>emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 in linkage group 24,
             complete sequence
          Length = 152545

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ttccaagagaaacaaaatat 88
             ||||||||||||||||||||
Sbjct: 10694 ttccaagagaaacaaaatat 10713

>gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosome 9, complete sequence
          Length = 218664

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    caaggaacacactggagatg 59
             ||||||||||||||||||||
Sbjct: 20044 caaggaacacactggagatg 20063

>gb|AC022148.6| Homo sapiens chromosome 19 clone CTD-3064H18, complete sequence
          Length = 196954

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     atatggtggggaaaaagaaa 104
              ||||||||||||||||||||
Sbjct: 136975 atatggtggggaaaaagaaa 136994

>gb|AC005932.1|AC005932 Homo sapiens chromosome 19, cosmid R31317, complete sequence
          Length = 41696

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  caacctggcatgacatcctc 231
            ||||||||||||||||||||
Sbjct: 3426 caacctggcatgacatcctc 3445

>emb|AL805948.9| Mouse DNA sequence from clone RP23-18C13 on chromosome 2, complete
             sequence
          Length = 204871

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    atatggtggggaaaaagaaa 104
             ||||||||||||||||||||
Sbjct: 91207 atatggtggggaaaaagaaa 91188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,635,106
Number of Sequences: 3902068
Number of extensions: 3635106
Number of successful extensions: 73084
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73031
Number of HSP's gapped (non-prelim): 53
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)