ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
2dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
3gb|AY109051.1| Zea mays PCO106076 mRNA sequence 127 5e-26
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
6emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374... 105 2e-19
7gb|AY108057.1| Zea mays PCO106075 mRNA sequence 84 7e-13
8ref|XM_469061.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-07
9dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
10dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
11gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
12gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genom... 42 2.3
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.3
14emb|CR752642.5| Zebrafish DNA sequence from clone DKEY-165D23 in... 42 2.3
15emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 i... 42 2.3
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 8.9
18gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 8.9
19gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome... 40 8.9
20ref|XM_746503.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.9
21gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, comple... 40 8.9
22emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on ch... 40 8.9
23emb|AL358034.18| Human DNA sequence from clone RP11-51K14 on chr... 40 8.9
24emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 i... 40 8.9
25gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete se... 40 8.9
26gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.9
27dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
28emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, com... 40 8.9
29gb|CP000225.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.9
30gb|CP000223.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.9
31gb|CP000203.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.9
32gb|CP000191.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.9
33gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complet... 40 8.9 
>dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F01, full
            insert sequence
          Length = 2516

 Score =  194 bits (98), Expect = 3e-46
 Identities = 236/282 (83%)
 Strand = Plus / Minus

                                                                        
Query: 356  ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 415
            |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 2110 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 2051

                                                                        
Query: 416  gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 475
             || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 2050 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 1991

                                                                        
Query: 476  ccccattaccagccataccccgacccgcatccacgtgccaccccctagatttatgagcaa 535
             |||||||||||||||||||| || | |||||| || || || || |  ||||  | |||
Sbjct: 1990 tcccattaccagccataccccaactctcatccatgtccctccacccaagtttactaacaa 1931

                                                                        
Query: 536  gtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaatcc 595
            ||||||||| | ||| |||||||||||||||| ||  |||||||| ||||||||||||||
Sbjct: 1930 gtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaatcc 1871

                                                      
Query: 596  tccagaatgaccaaatgagtgccttccatcgtcttggtcgat 637
            |||||| ||||||||||||||||| || || |||||||||||
Sbjct: 1870 tccagagtgaccaaatgagtgcctcccgtcatcttggtcgat 1829
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>dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D03, full
            insert sequence
          Length = 2272

 Score =  194 bits (98), Expect = 3e-46
 Identities = 236/282 (83%)
 Strand = Plus / Minus

                                                                        
Query: 356  ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 415
            |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 1866 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 1807

                                                                        
Query: 416  gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 475
             || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1806 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 1747

                                                                        
Query: 476  ccccattaccagccataccccgacccgcatccacgtgccaccccctagatttatgagcaa 535
             |||||||||||||||||||| || | |||||| || || || || |  ||||  | |||
Sbjct: 1746 tcccattaccagccataccccaactctcatccatgtccctccacccaagtttactaacaa 1687

                                                                        
Query: 536  gtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaatcc 595
            ||||||||| | ||| |||||||||||||||| ||  |||||||| ||||||||||||||
Sbjct: 1686 gtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaatcc 1627

                                                      
Query: 596  tccagaatgaccaaatgagtgccttccatcgtcttggtcgat 637
            |||||| ||||||||||||||||| || || |||||||||||
Sbjct: 1626 tccagagtgaccaaatgagtgcctcccgtcatcttggtcgat 1585
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>gb|AY109051.1| Zea mays PCO106076 mRNA sequence
          Length = 1172

 Score =  127 bits (64), Expect = 5e-26
 Identities = 190/232 (81%)
 Strand = Plus / Minus

                                                                       
Query: 417 acgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagacc 476
           ||||| ||||| || || || ||||||||||| ||||||||||||||||||| ||  || 
Sbjct: 829 acgtagacgacatctgttagggagctgtgggttcgtccgtagaaaatgtacaggagaaca 770

                                                                       
Query: 477 cccattaccagccataccccgacccgcatccacgtgccaccccctagatttatgagcaag 536
           ||||| | ||||||||  || || | |||||| ||| |||| || || ||||| | ||  
Sbjct: 769 cccatcagcagccatatgccaactctcatccatgtgtcaccacccaggtttatcaacaga 710

                                                                       
Query: 537 tatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaatcct 596
           || || ||||| || |||||||  || ||||||| |||||| || |||||  ||||||||
Sbjct: 709 tacgtatttatcaggatgcacaaaactggcagcactggaacaaaagggcatgtgaatcct 650

                                                               
Query: 597 ccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagca 648
           |||||||||||||| |||||||| ||| | ||||||||||||||||||||||
Sbjct: 649 ccagaatgaccaaaagagtgcctgccagcatcttggtcgatccaggagagca 598
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                            
Query: 356      ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 415
                |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 26655170 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 26655229

                                                                            
Query: 416      gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 475
                 || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 26655230 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 26655289

                                     
Query: 476      ccccattaccagccatacccc 496
                 ||||||||||||||||||||
Sbjct: 26655290 tcccattaccagccatacccc 26655310



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 533      caagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaa 592
                |||||||||||| | ||| |||||||||||||||| ||  |||||||| |||||||||||
Sbjct: 26655443 caagtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaa 26655502

                    
Query: 593      tcct 596
                ||||
Sbjct: 26655503 tcct 26655506



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 594      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgat 637
                |||||||| ||||||||||||||||| || || |||||||||||
Sbjct: 26655602 cctccagagtgaccaaatgagtgcctcccgtcatcttggtcgat 26655645
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                            
Query: 356      ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 415
                |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 26583339 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 26583398

                                                                            
Query: 416      gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 475
                 || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 26583399 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 26583458

                                     
Query: 476      ccccattaccagccatacccc 496
                 ||||||||||||||||||||
Sbjct: 26583459 tcccattaccagccatacccc 26583479



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 533      caagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaa 592
                |||||||||||| | ||| |||||||||||||||| ||  |||||||| |||||||||||
Sbjct: 26583612 caagtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaa 26583671

                    
Query: 593      tcct 596
                ||||
Sbjct: 26583672 tcct 26583675



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 594      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgat 637
                |||||||| ||||||||||||||||| || || |||||||||||
Sbjct: 26583771 cctccagagtgaccaaatgagtgcctcccgtcatcttggtcgat 26583814
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>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101173

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                         
Query: 356   ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 415
             |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 74040 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 74099

                                                                         
Query: 416   gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 475
              || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 74100 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 74159

                                  
Query: 476   ccccattaccagccatacccc 496
              ||||||||||||||||||||
Sbjct: 74160 tcccattaccagccatacccc 74180



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 533   caagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaa 592
             |||||||||||| | ||| |||||||||||||||| ||  |||||||| |||||||||||
Sbjct: 74313 caagtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaa 74372

                 
Query: 593   tcct 596
             ||||
Sbjct: 74373 tcct 74376



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 594   cctccagaatgaccaaatgagtgccttccatcgtcttggtcgat 637
             |||||||| ||||||||||||||||| || || |||||||||||
Sbjct: 74472 cctccagagtgaccaaatgagtgcctcccgtcatcttggtcgat 74515
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>gb|AY108057.1| Zea mays PCO106075 mRNA sequence
          Length = 668

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                       
Query: 567 agcagtggaacgaatgggcagatgaatcctccagaatgaccaaatgagtgccttccatcg 626
           |||| |||||| || |||||  |||||||||| ||||||||||| |||||||| ||| | 
Sbjct: 246 agcactggaacaaaagggcatgtgaatcctccggaatgaccaaaagagtgcctgccagca 187

                                 
Query: 627 tcttggtcgatccaggagagca 648
           ||||||||||||||||||||||
Sbjct: 186 tcttggtcgatccaggagagca 165



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 438 gagctgtgggtccgtccgtagaaa 461
           ||||||||||| ||||||||||||
Sbjct: 375 gagctgtgggttcgtccgtagaaa 352
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>ref|XM_469061.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 522  agatttatgagcaagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaat 581
            |||||||| | || ||||||||||| ||| ||  |||  || ||||| ||||||||||| 
Sbjct: 1760 agatttatcaacaggtatgtgtttacgaggatagacaagactggcagaagtggaacgaaa 1701

                                                                        
Query: 582  gggcagatgaatcctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccag 641
            |||||  | ||||||||||| || || || || ||||| ||||| |||||||||||||||
Sbjct: 1700 gggcatgtaaatcctccagattggccgaaagaatgcctgccatcatcttggtcgatccag 1641

                 
Query: 642  gagag 646
             ||||
Sbjct: 1640 cagag 1636
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>dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A08, full
            insert sequence
          Length = 2110

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 522  agatttatgagcaagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaat 581
            |||||||| | || ||||||||||| ||| ||  |||  || ||||| ||||||||||| 
Sbjct: 1669 agatttatcaacaggtatgtgtttacgaggatagacaagactggcagaagtggaacgaaa 1610

                                                                        
Query: 582  gggcagatgaatcctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccag 641
            |||||  | ||||||||||| || || || || ||||| ||||| |||||||||||||||
Sbjct: 1609 gggcatgtaaatcctccagattggccgaaagaatgcctgccatcatcttggtcgatccag 1550

                 
Query: 642  gagag 646
             ||||
Sbjct: 1549 cagag 1545
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>dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063A11, full
            insert sequence
          Length = 2455

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 522  agatttatgagcaagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaat 581
            |||||||| | || ||||||||||| ||| ||  |||  || ||||| ||||||||||| 
Sbjct: 2024 agatttatcaacaggtatgtgtttacgaggatagacaagactggcagaagtggaacgaaa 1965

                                                                        
Query: 582  gggcagatgaatcctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccag 641
            |||||  | ||||||||||| || || || || ||||| ||||| |||||||||||||||
Sbjct: 1964 gggcatgtaaatcctccagattggccgaaagaatgcctgccatcatcttggtcgatccag 1905

                 
Query: 642  gagag 646
             ||||
Sbjct: 1904 cagag 1900
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>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01,
              complete sequence
          Length = 161741

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 594    cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 646
              |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 114781 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 114833
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>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete
             sequence
          Length = 130193

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 594   cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 646
             |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 83966 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 83914
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 594      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 646
                |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 25218742 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 25218794
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>emb|CR752642.5| Zebrafish DNA sequence from clone DKEY-165D23 in linkage group 5,
           complete sequence
          Length = 16751

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 66  gcaaatgaatcagccctcgca 86
           |||||||||||||||||||||
Sbjct: 249 gcaaatgaatcagccctcgca 229
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>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5,
              complete sequence
          Length = 142908

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gcaaatgaatcagccctcgca 86
              |||||||||||||||||||||
Sbjct: 141157 gcaaatgaatcagccctcgca 141137
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 594      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 646
                |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 25310114 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 25310166
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tttatacatattaactattt 148
              ||||||||||||||||||||
Sbjct: 322619 tttatacatattaactattt 322600
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      gctgcgatgtctgccgccag 29
               ||||||||||||||||||||
Sbjct: 1903748 gctgcgatgtctgccgccag 1903729
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>gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome 9, complete sequence
          Length = 203891

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    gtttgcctgagccagggaga 417
              ||||||||||||||||||||
Sbjct: 193511 gtttgcctgagccagggaga 193530
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>ref|XM_746503.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g12350) partial
            mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 304  tcagggtgcttgaggtctccgtga 327
            ||||||||||||||||||| ||||
Sbjct: 1411 tcagggtgcttgaggtctcggtga 1388
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>gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, complete sequence
          Length = 213989

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     gcattgctgcacacattgca 113
              ||||||||||||||||||||
Sbjct: 211860 gcattgctgcacacattgca 211841
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>emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on chromosome 6 Contains a
             ribosomal protein L27a (60S ribosomal protein L27a)
             (RPL27A) pseudogene and a novel gene, complete sequence
          Length = 63621

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   acttctatttatacatatta 141
             ||||||||||||||||||||
Sbjct: 14745 acttctatttatacatatta 14726
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>emb|AL358034.18| Human DNA sequence from clone RP11-51K14 on chromosome 10, complete
             sequence
          Length = 108373

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 352   ttctctaggccacaaaccctgatg 375
             ||||||||||||||||||| ||||
Sbjct: 45453 ttctctaggccacaaacccagatg 45430
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>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18,
             complete sequence
          Length = 143863

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   atacatattaactatttaca 151
             ||||||||||||||||||||
Sbjct: 83431 atacatattaactatttaca 83412
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>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence
          Length = 139631

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tttatacatattaactattt 148
              ||||||||||||||||||||
Sbjct: 133113 tttatacatattaactattt 133094
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>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete
              sequence
          Length = 228371

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    atgcaggatgcagcagcaac 282
              ||||||||||||||||||||
Sbjct: 207380 atgcaggatgcagcagcaac 207399
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>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete
             sequence
          Length = 147533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   gtttgcctgagccagggaga 417
             ||||||||||||||||||||
Sbjct: 28201 gtttgcctgagccagggaga 28220
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>emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, complete sequence
          Length = 120606

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   cgagctgtgggtccgtccgt 456
             ||||||||||||||||||||
Sbjct: 55476 cgagctgtgggtccgtccgt 55457
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>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724
          Length = 820587

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     tcgcattgctgcacacattg 111
              ||||||||||||||||||||
Sbjct: 430043 tcgcattgctgcacacattg 430062
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>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790
          Length = 626829

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    tcttacacttctatttatac 135
              ||||||||||||||||||||
Sbjct: 559851 tcttacacttctatttatac 559832
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>gb|CP000203.1| Drosophila melanogaster genomic scaffold 211000022280760
          Length = 90124

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   tcttacacttctatttatac 135
             ||||||||||||||||||||
Sbjct: 36176 tcttacacttctatttatac 36157
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>gb|CP000191.1| Drosophila melanogaster genomic scaffold 211000022280172
          Length = 132906

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tcttacacttctatttatac 135
             ||||||||||||||||||||
Sbjct: 30245 tcttacacttctatttatac 30264
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>gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complete sequence
          Length = 169272

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    gtttgcctgagccagggaga 417
              ||||||||||||||||||||
Sbjct: 132446 gtttgcctgagccagggaga 132427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,916,163
Number of Sequences: 3902068
Number of extensions: 4916163
Number of successful extensions: 108987
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108752
Number of HSP's gapped (non-prelim): 234
length of query: 655
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 632
effective length of database: 17,143,297,704
effective search space: 10834564148928
effective search space used: 10834564148928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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