ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group... 367 3e-98
2ref|XM_483846.1| Oryza sativa (japonica cultivar-group), mRNA 367 3e-98
3dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
4dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 8e-96
5dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds 226 7e-56
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
7dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
8gb|AY389579.1| Hyacinthus orientalis unknown mRNA 60 1e-05
9dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds 56 2e-04
10gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 u... 52 0.002
11dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds 48 0.037
12emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9 46 0.15
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.57
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.57
15gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete se... 44 0.57
16gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete se... 44 0.57
17emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.57
18emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 44 0.57
19emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 44 0.57
20gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.57
21dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.57
22emb|Z35330.1|BJRIBRNA B.japonicum (110) genes for 16S, 23S, 5S r... 44 0.57
23gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.57
24emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosm... 44 0.57
25gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosom... 42 2.3
26emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in... 42 2.3
27emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L... 42 2.3
28gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.3
29dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950 42 2.3
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
31emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.3
32ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 ... 40 9.0
33gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, com... 40 9.0
34gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 9.0
35gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, co... 40 9.0
36gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 9.0
37gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete... 40 9.0
38ref|XM_960350.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.0
39ref|XM_331868.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.0
40gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 9.0
41gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, comp... 40 9.0
42emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 9.0
43gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome... 40 9.0
44gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosom... 40 9.0
45gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete... 40 9.0
46gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complet... 40 9.0
47emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in l... 40 9.0
48emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19... 40 9.0
49gb|AF332698.1| Sus scrofa CD47 antigen/integrin-associated prote... 40 9.0
50emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig... 40 9.0
51emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.0
52emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.0
53emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chr... 40 9.0
54gb|AE012532.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 9.0
55gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 9.0
56gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, co... 40 9.0
57gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome... 40 9.0
58gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 9.0
59gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 9.0
60gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Canc... 40 9.0
61gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, r... 40 9.0
62gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome... 40 9.0
63gb|AF270494.2|AF270494 Sus scrofa CD47 antigen/integrin-associat... 40 9.0
64ref|NM_213982.1| Sus scrofa CD47 antigen/integrin-associated pro... 40 9.0
65gb|AC096632.3| Homo sapiens chromosome 1 clone RP11-38O14, compl... 40 9.0
66gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 9.0
67gb|AY941330.1| Lycopersicon peruvianum putative sterol C-14 redu... 40 9.0
68dbj|AB109116.1| Streptomyces griseus SsgB mRNA, complete cds 40 9.0
69emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.0
70gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, compl... 40 9.0
71gb|AF117314.1|AF117314 Meriones unguiculatus prion protein (PrP)... 40 9.0
72gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 40 9.0
73gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97... 40 9.0
74gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 9.0
75gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 9.0
76emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 9.0
77gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, com... 40 9.0
78emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on ch... 40 9.0 
>ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0044E16.27
           mRNA
          Length = 886

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Minus

                                                                       
Query: 328 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 490 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 431

                                                                       
Query: 388 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctgggagtgcagcgcgatg 447
           |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 430 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctgcgagtgcagcgcgatg 371

                                                                       
Query: 448 gccttgcccctgagctggttgaagcgcttgcgtccaacgatgttgcgcaccaccaccacc 507
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 370 gcctttcccctgagctggttgaagcgcttgcggccaacgatgttgcgcaccaccaccacc 311

                                                                       
Query: 508 aagggcgcgaagatgcccttgccctcgtttacattgcccatcctggcgggcgtccgaagg 567
           |  || |||||||| |||||||||||||| || ||||||||||| || |||| ||| || 
Sbjct: 310 accggtgcgaagatccccttgccctcgttcacgttgcccatcctcgccggcgcccgcagt 251

                                    
Query: 568 ggccgcgccgaccgcggccgcgccg 592
           |||||||||||||| ||||||||||
Sbjct: 250 ggccgcgccgaccgaggccgcgccg 226
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>ref|XM_483846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 760

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Minus

                                                                       
Query: 328 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 443

                                                                       
Query: 388 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctgggagtgcagcgcgatg 447
           |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 442 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctgcgagtgcagcgcgatg 383

                                                                       
Query: 448 gccttgcccctgagctggttgaagcgcttgcgtccaacgatgttgcgcaccaccaccacc 507
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 gcctttcccctgagctggttgaagcgcttgcggccaacgatgttgcgcaccaccaccacc 323

                                                                       
Query: 508 aagggcgcgaagatgcccttgccctcgtttacattgcccatcctggcgggcgtccgaagg 567
           |  || |||||||| |||||||||||||| || ||||||||||| || |||| ||| || 
Sbjct: 322 accggtgcgaagatccccttgccctcgttcacgttgcccatcctcgccggcgcccgcagt 263

                                    
Query: 568 ggccgcgccgaccgcggccgcgccg 592
           |||||||||||||| ||||||||||
Sbjct: 262 ggccgcgccgaccgaggccgcgccg 238
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>dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J23, full
           insert sequence
          Length = 886

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Minus

                                                                       
Query: 328 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 490 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 431

                                                                       
Query: 388 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctgggagtgcagcgcgatg 447
           |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 430 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctgcgagtgcagcgcgatg 371

                                                                       
Query: 448 gccttgcccctgagctggttgaagcgcttgcgtccaacgatgttgcgcaccaccaccacc 507
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 370 gcctttcccctgagctggttgaagcgcttgcggccaacgatgttgcgcaccaccaccacc 311

                                                                       
Query: 508 aagggcgcgaagatgcccttgccctcgtttacattgcccatcctggcgggcgtccgaagg 567
           |  || |||||||| |||||||||||||| || ||||||||||| || |||| ||| || 
Sbjct: 310 accggtgcgaagatccccttgccctcgttcacgttgcccatcctcgccggcgcccgcagt 251

                                    
Query: 568 ggccgcgccgaccgcggccgcgccg 592
           |||||||||||||| ||||||||||
Sbjct: 250 ggccgcgccgaccgaggccgcgccg 226
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>dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A06, full
           insert sequence
          Length = 760

 Score =  359 bits (181), Expect = 8e-96
 Identities = 244/265 (92%)
 Strand = Plus / Minus

                                                                       
Query: 328 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 443

                                                                       
Query: 388 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctgggagtgcagcgcgatg 447
           |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 442 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctgcgagtgcagcgcgatg 383

                                                                       
Query: 448 gccttgcccctgagctggttgaagcgcttgcgtccaacgatgttgcgcaccaccaccacc 507
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 gcctttcccctgagctggttgaagcgcttgcggccaacgatgttgcgcaccaccaccacc 323

                                                                       
Query: 508 aagggcgcgaagatgcccttgccctcgtttacattgcccatcctggcgggcgtccgaagg 567
           |  || |||||||| |||||||||||||  || ||||||||||| || |||| ||| || 
Sbjct: 322 accggtgcgaagatccccttgccctcgtccacgttgcccatcctcgccggcgcccgcagt 263

                                    
Query: 568 ggccgcgccgaccgcggccgcgccg 592
           |||||||||||||| ||||||||||
Sbjct: 262 ggccgcgccgaccgaggccgcgccg 238
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>dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds
          Length = 596

 Score =  226 bits (114), Expect = 7e-56
 Identities = 195/222 (87%)
 Strand = Plus / Minus

                                                                       
Query: 328 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 471 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatgaggccctgccgctgc 412

                                                                       
Query: 388 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctgggagtgcagcgcgatg 447
           |||| ||| |||||||||||||||||||||||| |||| ||||| |||||||||||||| 
Sbjct: 411 ttggagtcggcgccgatggtcttgcagaactcgttgatgacctgcgagtgcagcgcgatt 352

                                                                       
Query: 448 gccttgcccctgagctggttgaagcgcttgcgtccaacgatgttgcgcaccaccaccacc 507
           || || ||||| |||||||||||||| ||||| |||| |||||||||| ||||||| || 
Sbjct: 351 gctttccccctcagctggttgaagcgtttgcggccaatgatgttgcgcgccaccacgacg 292

                                                     
Query: 508 aagggcgcgaagatgcccttgccctcgtttacattgcccatc 549
           |  || ||||| |  |||||||| ||||| || |||||||||
Sbjct: 291 agcggtgcgaacagccccttgccatcgttcacgttgcccatc 250



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 618 gtggtcgtcaccggacacagagctagaccacgtcgg 653
           ||||||||| ||||| || ||||| |||||||||||
Sbjct: 166 gtggtcgtcgccggaaaccgagctggaccacgtcgg 131
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  210 bits (106), Expect = 4e-51
 Identities = 151/166 (90%)
 Strand = Plus / Minus

                                                                            
Query: 427      acctgggagtgcagcgcgatggccttgcccctgagctggttgaagcgcttgcgtccaacg 486
                ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 28370994 acctgcgagtgcagcgcgatggcctttcccctgagctggttgaagcgcttgcggccaacg 28370935

                                                                            
Query: 487      atgttgcgcaccaccaccaccaagggcgcgaagatgcccttgccctcgtttacattgccc 546
                ||||||||||||||||||||||  || |||||||| |||||||||||||| || ||||||
Sbjct: 28370934 atgttgcgcaccaccaccaccaccggtgcgaagatccccttgccctcgttcacgttgccc 28370875

                                                              
Query: 547      atcctggcgggcgtccgaaggggccgcgccgaccgcggccgcgccg 592
                ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 28370874 atcctcgccggcgcccgcagtggccgcgccgaccgaggccgcgccg 28370829



 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                            
Query: 328      gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
                |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 28371283 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 28371224

                                                            
Query: 388      ttggggtcagcgccgatggtcttgcagaactcggtgatcacctg 431
                |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 28371223 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctg 28371180
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score =  210 bits (106), Expect = 4e-51
 Identities = 151/166 (90%)
 Strand = Plus / Minus

                                                                         
Query: 427   acctgggagtgcagcgcgatggccttgcccctgagctggttgaagcgcttgcgtccaacg 486
             ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 99800 acctgcgagtgcagcgcgatggcctttcccctgagctggttgaagcgcttgcggccaacg 99741

                                                                         
Query: 487   atgttgcgcaccaccaccaccaagggcgcgaagatgcccttgccctcgtttacattgccc 546
             ||||||||||||||||||||||  || |||||||| |||||||||||||| || ||||||
Sbjct: 99740 atgttgcgcaccaccaccaccaccggtgcgaagatccccttgccctcgttcacgttgccc 99681

                                                           
Query: 547   atcctggcgggcgtccgaaggggccgcgccgaccgcggccgcgccg 592
             ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 99680 atcctcgccggcgcccgcagtggccgcgccgaccgaggccgcgccg 99635



 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                          
Query: 328    gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 387
              |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 100089 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 100030

                                                          
Query: 388    ttggggtcagcgccgatggtcttgcagaactcggtgatcacctg 431
              |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 100029 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctg 99986
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>gb|AY389579.1| Hyacinthus orientalis unknown mRNA
          Length = 356

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                       
Query: 337 ccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgcttggggtca 396
           |||||| |||||||||||||||| || |  |||||||  || |||||||||||    || 
Sbjct: 229 ccgagcatctctccgttcttcttcgccaaccggatcagtccttgcctctgcttcccatct 170

                                                                       
Query: 397 gcgccgatggtcttgcagaactcggtgatcacctgggagtgcagcgcgatggccttgccc 456
           || || || |  |||||||||||| |||| ||||| ||||| || || |||||||| || 
Sbjct: 169 gctcctatcgatttgcagaactcgttgattacctgagagtggagggctatggcctttcct 110

                         
Query: 457 ctgagctggttgaa 470
           ||||||||||||||
Sbjct: 109 ctgagctggttgaa 96
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>dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds
          Length = 636

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 406 gtcttgcagaactcggtgatcacctgggagtgcagcgcgatggc 449
           |||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 418 gtcttgcagaactccgtgatcacctgtgagtgaagagcgatggc 375



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 331 aggaatccgagcttctctccgttcttctt 359
           |||||||| |||||||| |||||||||||
Sbjct: 493 aggaatcccagcttctccccgttcttctt 465
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>gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 unknown mRNA
          Length = 1286

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 331 aggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctg 380
           ||||| || |||||||| || ||||||||||||||||| |||| ||||||
Sbjct: 545 aggaagcccagcttctcgccattcttcttggcgaggcgaatcacgccctg 496
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>dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds
          Length = 660

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 406 gtcttgcagaactcggtgatcacctgggagtgcagcgcgatggc 449
           |||||||||||||| ||||| ||||| ||||| || ||||||||
Sbjct: 399 gtcttgcagaactccgtgatgacctgtgagtgaagagcgatggc 356
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>emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9
          Length = 878

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 368 ggatcaagccctgcctctgcttg 390
           |||||||||||||||||||||||
Sbjct: 336 ggatcaagccctgcctctgcttg 358
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 569     gccgcgccgaccgcggccgcgc 590
               ||||||||||||||||||||||
Sbjct: 2438545 gccgcgccgaccgcggccgcgc 2438524



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 569     gccgcgccgaccgcggccgcgccg 592
               |||||||||| |||||||||||||
Sbjct: 1247381 gccgcgccgagcgcggccgcgccg 1247404
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 569     gccgcgccgaccgcggccgcgc 590
               ||||||||||||||||||||||
Sbjct: 3653691 gccgcgccgaccgcggccgcgc 3653670



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 569     gccgcgccgaccgcggccgcgccg 592
               |||||||||| |||||||||||||
Sbjct: 2258017 gccgcgccgagcgcggccgcgccg 2257994
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>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
          Length = 108900

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    ctaccgctgaggccatcagtag 56
             ||||||||||||||||||||||
Sbjct: 27103 ctaccgctgaggccatcagtag 27082
to top
>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
          Length = 113345

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    ctaccgctgaggccatcagtag 56
             ||||||||||||||||||||||
Sbjct: 82325 ctaccgctgaggccatcagtag 82304
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 569     gccgcgccgaccgcggccgcgc 590
               ||||||||||||||||||||||
Sbjct: 3396399 gccgcgccgaccgcggccgcgc 3396378



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 569     gccgcgccgaccgcggccgcgccg 592
               |||||||||| |||||||||||||
Sbjct: 2116699 gccgcgccgagcgcggccgcgccg 2116722
to top
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 568   ggccgcgccgaccgcggccgcg 589
             ||||||||||||||||||||||
Sbjct: 35761 ggccgcgccgaccgcggccgcg 35740
to top
>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 371    tcaagccctgcctctgcttggg 392
              ||||||||||||||||||||||
Sbjct: 173719 tcaagccctgcctctgcttggg 173698
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 569     gccgcgccgaccgcggccgcgccgac 594
               ||||||||||||||||||||| ||||
Sbjct: 2430296 gccgcgccgaccgcggccgcggcgac 2430271
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 571     cgcgccgaccgcggccgcgccg 592
               ||||||||||||||||||||||
Sbjct: 1527699 cgcgccgaccgcggccgcgccg 1527678
to top
>emb|Z35330.1|BJRIBRNA B.japonicum (110) genes for 16S, 23S, 5S ribosomal RNA, transfer
           RNA-Ala transfer RNA-Ala
          Length = 6726

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 571 cgcgccgaccgcggccgcgccg 592
           ||||||||||||||||||||||
Sbjct: 314 cgcgccgaccgcggccgcgccg 293
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 567     gggccgcgccgaccgcggccgcgccgacaccgac 600
               |||||||||| ||| |||| ||||||||||||||
Sbjct: 2226117 gggccgcgcctaccacggcggcgccgacaccgac 2226150
to top
>emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosmid clone b3cf1.2.f09
          Length = 38920

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 568  ggccgcgccgaccgcggccgcgccga 593
            |||||||||| |||||||||||||||
Sbjct: 3500 ggccgcgccggccgcggccgcgccga 3475
to top
>gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosome 17, complete sequence
          Length = 204842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    gtatacatacatgcatgcaat 200
              |||||||||||||||||||||
Sbjct: 150338 gtatacatacatgcatgcaat 150318
to top
>emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in linkage group 5, complete
              sequence
          Length = 155542

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     catcatttgtccatccatcca 87
              |||||||||||||||||||||
Sbjct: 126044 catcatttgtccatccatcca 126024
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>emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L22 on chromosome 20 Contains the
             3' end of the GDAP1L1 gene for ganglioside-induced
             differentiation-associated protein 1-like 1, the R3HDML
             gene for R3HDML domain containing-like, the C20orf142
             gene, three novel genes, the 5' end of one variant of the
             HNF4A gene for hepatocyte nuclear factor 4 and two CpG
             islands, complete sequence
          Length = 131841

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    acatcatttgtccatccatcc 86
             |||||||||||||||||||||
Sbjct: 92887 acatcatttgtccatccatcc 92867
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 568    ggccgcgccgaccgcggccgcgccg 592
              |||||||||||| ||||||||||||
Sbjct: 638707 ggccgcgccgacggcggccgcgccg 638683
to top
>dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950
          Length = 1928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 66  acatcatttgtccatccatcc 86
           |||||||||||||||||||||
Sbjct: 582 acatcatttgtccatccatcc 602
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 578     accgcggccgcgccgacaccg 598
               |||||||||||||||||||||
Sbjct: 1996695 accgcggccgcgccgacaccg 1996715



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 575     ccgaccgcggccgcgccgacaccg 598
               |||||||| |||||||||||||||
Sbjct: 3960281 ccgaccgcagccgcgccgacaccg 3960304
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 569    gccgcgccgaccgcggccgcg 589
              |||||||||||||||||||||
Sbjct: 802828 gccgcgccgaccgcggccgcg 802848
to top
>ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 transcript variant
            AT1G13220.2 mRNA, complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 206  aactccaaggaaagatagaagagc 229
            |||||||| |||||||||||||||
Sbjct: 1208 aactccaaagaaagatagaagagc 1231
to top
>gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, complete sequence
          Length = 218246

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   agtatacatacatgcatgca 198
             ||||||||||||||||||||
Sbjct: 23531 agtatacatacatgcatgca 23512
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 571     cgcgccgaccgcggccgcgccgacaccg 598
               ||||||| ||||||||||||||| ||||
Sbjct: 1522380 cgcgccgcccgcggccgcgccgataccg 1522353
to top
>gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, complete sequence
          Length = 195322

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   gtatacatacatgcatgcaa 199
             ||||||||||||||||||||
Sbjct: 75284 gtatacatacatgcatgcaa 75265
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 572    gcgccgaccgcggccgcgccgaca 595
              ||||||||||||| ||||||||||
Sbjct: 822281 gcgccgaccgcggtcgcgccgaca 822258
to top
>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence
          Length = 193926

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   atctcccaactccaaggaaa 218
             ||||||||||||||||||||
Sbjct: 25039 atctcccaactccaaggaaa 25058
to top
>ref|XM_960350.1| Neurospora crassa OR74A hypothetical protein (NCU02670.1) partial
            mRNA
          Length = 2868

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 495  caccaccaccaccaagggcg 514
            ||||||||||||||||||||
Sbjct: 2761 caccaccaccaccaagggcg 2742
to top
>ref|XM_331868.1| Neurospora crassa OR74A hypothetical protein (NCU02670.1) partial
            mRNA
          Length = 2868

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 495  caccaccaccaccaagggcg 514
            ||||||||||||||||||||
Sbjct: 2761 caccaccaccaccaagggcg 2742
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 568     ggccgcgccgaccgcggccgcgcc 591
               |||||||||| |||||||||||||
Sbjct: 1699691 ggccgcgccgcccgcggccgcgcc 1699668
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>gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, complete sequence
          Length = 234479

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    agtatacatacatgcatgca 198
              ||||||||||||||||||||
Sbjct: 154419 agtatacatacatgcatgca 154400
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 489     gttgcgcaccaccaccacca 508
               ||||||||||||||||||||
Sbjct: 1577344 gttgcgcaccaccaccacca 1577363
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>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence
          Length = 244566

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   agtatacatacatgcatgca 198
             ||||||||||||||||||||
Sbjct: 55796 agtatacatacatgcatgca 55815
to top
>gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosome 14, complete sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     catcatttgtccatccatcc 86
              ||||||||||||||||||||
Sbjct: 122185 catcatttgtccatccatcc 122166
to top
>gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   agtatacatacatgcatgca 198
             ||||||||||||||||||||
Sbjct: 38637 agtatacatacatgcatgca 38618
to top
>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   agtatacatacatgcatgca 198
             ||||||||||||||||||||
Sbjct: 27615 agtatacatacatgcatgca 27596
to top
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete
              sequence
          Length = 235135

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     atcatttgtccatccatcca 87
              ||||||||||||||||||||
Sbjct: 178267 atcatttgtccatccatcca 178286
to top
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1,
             complete sequence
          Length = 114771

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ggagaaggaaggggtgattg 318
             ||||||||||||||||||||
Sbjct: 69743 ggagaaggaaggggtgattg 69762
to top
>gb|AF332698.1| Sus scrofa CD47 antigen/integrin-associated protein (CD47/IAP)
           mRNA, complete cds
          Length = 2759

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 494 gcaccaccaccaccaagggc 513
           ||||||||||||||||||||
Sbjct: 146 gcaccaccaccaccaagggc 127
to top
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8
          Length = 138191

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   caccaccaccaccaagggcg 514
             ||||||||||||||||||||
Sbjct: 75951 caccaccaccaccaagggcg 75970
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 568     ggccgcgccgaccgcggccgcgcc 591
               |||||||||| |||||||||||||
Sbjct: 3034593 ggccgcgccgcccgcggccgcgcc 3034570
to top
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 570   ccgcgccgaccgcggccgcgccga 593
             ||||| ||||||||||||||||||
Sbjct: 14050 ccgcggcgaccgcggccgcgccga 14073
to top
>emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chromosome 11, complete
             sequence
          Length = 129196

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   gtatacatacatgcatgcaa 199
             ||||||||||||||||||||
Sbjct: 71848 gtatacatacatgcatgcaa 71867
to top
>gb|AE012532.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 440
            of 460 of the complete genome
          Length = 10505

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 585  ccgcgccgacaccgacatggccag 608
            |||||||||||||||| |||||||
Sbjct: 2845 ccgcgccgacaccgacctggccag 2868
to top
>gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 136
            of 460 of the complete genome
          Length = 11820

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  gttgcgcaccaccaccacca 508
            ||||||||||||||||||||
Sbjct: 9120 gttgcgcaccaccaccacca 9139
to top
>gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, complete sequence
          Length = 127431

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     atacatcatttgtccatccatcca 87
              ||||||||| ||||||||||||||
Sbjct: 112953 atacatcatctgtccatccatcca 112976
to top
>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence
          Length = 202765

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tatacatacatgcatgcaat 200
              ||||||||||||||||||||
Sbjct: 140822 tatacatacatgcatgcaat 140841
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 585     ccgcgccgacaccgacatggccag 608
               |||||||||||||||| |||||||
Sbjct: 4935904 ccgcgccgacaccgacctggccag 4935927



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     gttgcgcaccaccaccacca 508
               ||||||||||||||||||||
Sbjct: 3532467 gttgcgcaccaccaccacca 3532448
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 568     ggccgcgccgaccgcggccgcgcc 591
               |||||||||| |||||||||||||
Sbjct: 2183403 ggccgcgccgcccgcggccgcgcc 2183380
to top
>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 198476

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    agtatacatacatgcatgca 198
              ||||||||||||||||||||
Sbjct: 194083 agtatacatacatgcatgca 194064
to top
>gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, region 97D-97E, BAC clone
              BACR05C10, complete sequence
          Length = 174894

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    atctcccaactccaaggaaa 218
              ||||||||||||||||||||
Sbjct: 134151 atctcccaactccaaggaaa 134170
to top
>gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome 9, complete sequence
          Length = 171391

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tatacatacatgcatgcaat 200
             ||||||||||||||||||||
Sbjct: 47610 tatacatacatgcatgcaat 47629
to top
>gb|AF270494.2|AF270494 Sus scrofa CD47 antigen/integrin-associated protein (CD47/IAP)
           mRNA, complete cds
          Length = 1402

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 494 gcaccaccaccaccaagggc 513
           ||||||||||||||||||||
Sbjct: 146 gcaccaccaccaccaagggc 127
to top
>ref|NM_213982.1| Sus scrofa CD47 antigen/integrin-associated protein (CD47/IAP),
           mRNA
          Length = 2759

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 494 gcaccaccaccaccaagggc 513
           ||||||||||||||||||||
Sbjct: 146 gcaccaccaccaccaagggc 127
to top
>gb|AC096632.3| Homo sapiens chromosome 1 clone RP11-38O14, complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 285    agtagaaaagggtaggagaaggaa 308
              |||||||| |||||||||||||||
Sbjct: 101863 agtagaaaggggtaggagaaggaa 101840
to top
>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    agtatacatacatgcatgca 198
              ||||||||||||||||||||
Sbjct: 115849 agtatacatacatgcatgca 115830
to top
>gb|AY941330.1| Lycopersicon peruvianum putative sterol C-14 reductase (CT143)
           gene, CT143-7235b allele, partial cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 tagaaaagggtaggagaagg 306
           ||||||||||||||||||||
Sbjct: 445 tagaaaagggtaggagaagg 464
to top
>dbj|AB109116.1| Streptomyces griseus SsgB mRNA, complete cds
          Length = 1248

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  gccgcgccgaccgcggccgc 588
            ||||||||||||||||||||
Sbjct: 1145 gccgcgccgaccgcggccgc 1126
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 570     ccgcgccgaccgcggccgcgccga 593
               ||||||||||| ||||||||||||
Sbjct: 2555054 ccgcgccgacctcggccgcgccga 2555031



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 570     ccgcgccgaccgcggccgcgccga 593
               |||||||| |||||||||||||||
Sbjct: 2444394 ccgcgccggccgcggccgcgccga 2444417
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>gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, complete sequence
          Length = 217930

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    caccaccaccaccaagggcg 514
              ||||||||||||||||||||
Sbjct: 173006 caccaccaccaccaagggcg 172987
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>gb|AF117314.1|AF117314 Meriones unguiculatus prion protein (PrP) gene, partial cds
          Length = 759

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 495 caccaccaccaccaagggcg 514
           ||||||||||||||||||||
Sbjct: 564 caccaccaccaccaagggcg 583
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>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   aactccaaggaaagatagaagagc 229
             |||||||| |||||||||||||||
Sbjct: 90365 aactccaaagaaagatagaagagc 90388
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>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the
             complete sequence
          Length = 222554

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   atctcccaactccaaggaaa 218
             ||||||||||||||||||||
Sbjct: 23704 atctcccaactccaaggaaa 23723
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 511     ggcgcgaagatgcccttgccctcg 534
               ||||||||||||||||||| ||||
Sbjct: 1253049 ggcgcgaagatgcccttgcgctcg 1253026
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     acatcatttgtccatccatc 85
              ||||||||||||||||||||
Sbjct: 144130 acatcatttgtccatccatc 144111
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
              sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    agtatacatacatgcatgca 198
              ||||||||||||||||||||
Sbjct: 155022 agtatacatacatgcatgca 155003
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>gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, complete sequence
          Length = 206095

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   agtatacatacatgcatgca 198
             ||||||||||||||||||||
Sbjct: 43825 agtatacatacatgcatgca 43844
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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
              sequence
          Length = 201671

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    ggagaaggaaggggtgattg 318
              ||||||||||||||||||||
Sbjct: 162441 ggagaaggaaggggtgattg 162422


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,971,009
Number of Sequences: 3902068
Number of extensions: 5971009
Number of successful extensions: 258966
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 256642
Number of HSP's gapped (non-prelim): 2324
length of query: 656
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 633
effective length of database: 17,143,297,704
effective search space: 10851707446632
effective search space used: 10851707446632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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