| Clone Name | rbaal28p24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 2371 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||||| ||||||||||||||||||| Sbjct: 2049 cttctcgaacttctggatctgattcaag 2022
>dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1783 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||||| ||||||||||||||||||| Sbjct: 1502 cttctcgaacttctggatctgattcaag 1475
>dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||||| ||||||||||||||||||| Sbjct: 1029 cttctcgaacttctggatctgattcaag 1002
>gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7, complete sequence Length = 118334 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tataggtacaaagaagctaca 113 ||||||||||||||||||||| Sbjct: 118058 tataggtacaaagaagctaca 118078
>gb|BT016874.1| Zea mays clone Contig707 mRNA sequence Length = 1051 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||| | ||||||||||||||||||| Sbjct: 364 cttctcaaacttctggatctgattcaag 391
>gb|BT016861.1| Zea mays clone Contig694 mRNA sequence Length = 1412 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||| | ||||||||||||||||||| Sbjct: 368 cttctcaaacttctggatctgattcaag 395
>gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarate/malate translocator mRNA, complete cds; nuclear gene for mitochondrial product Length = 1416 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||| | ||||||||||||||||||| Sbjct: 1077 cttctcaatcttctggatctgattcaag 1050
>gb|AY103946.1| Zea mays PCO074099 mRNA sequence Length = 1530 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 cttctcgaccttctggatctgattcaag 196 |||||| | ||||||||||||||||||| Sbjct: 1075 cttctcaaacttctggatctgattcaag 1048
>gb|AE010338.1| Methanopyrus kandleri AV19 section 37 of 157 of the complete genome Length = 13014 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 162 cgacacgcttctcgacctt 180 ||||||||||||||||||| Sbjct: 7378 cgacacgcttctcgacctt 7396
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03 map S20262S, complete sequence Length = 149553 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 166 acgcttctcgaccttctggatct 188 ||||||||||| ||||||||||| Sbjct: 82633 acgcttctcgagcttctggatct 82611
>ref|XM_751706.1| Ustilago maydis 521 hypothetical protein (UM00652.1) partial mRNA Length = 2400 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 aggccgacacgcttctcga 176 ||||||||||||||||||| Sbjct: 1010 aggccgacacgcttctcga 1028
>emb|AL161622.12| Human DNA sequence from clone RP3-402H5 on chromosome 6p12.3-21.1 Contains the 3' end of a gene for a novel protein similar to seven transmembrane receptor (Rhodopsin family), complete sequence Length = 131967 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 atttatataggtacaaaga 106 ||||||||||||||||||| Sbjct: 88332 atttatataggtacaaaga 88314
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 ggcaaggatagcatagcat 147 ||||||||||||||||||| Sbjct: 5688 ggcaaggatagcatagcat 5706
>emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chromosome 11 Contains the 5' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 172823 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 actgctgatttatataggt 99 ||||||||||||||||||| Sbjct: 36263 actgctgatttatataggt 36245
>dbj|AK083869.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130032O11 product:unclassifiable, full insert sequence Length = 4614 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 actgctgatttatataggt 99 ||||||||||||||||||| Sbjct: 353 actgctgatttatataggt 371
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 ggcaaggatagcatagcat 147 ||||||||||||||||||| Sbjct: 9407567 ggcaaggatagcatagcat 9407585
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 166 acgcttctcgaccttctggatct 188 ||||||||||| ||||||||||| Sbjct: 13366280 acgcttctcgagcttctggatct 13366258
>gb|AC104621.5| Homo sapiens BAC clone RP11-409K3 from 2, complete sequence Length = 28670 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 tacactattacaatttgtc 128 ||||||||||||||||||| Sbjct: 18003 tacactattacaatttgtc 18021
>dbj|AK068090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N13, full insert sequence Length = 1354 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 166 acgcttctcgaccttctggatct 188 ||||||||||| ||||||||||| Sbjct: 1075 acgcttctcgagcttctggatct 1053
>dbj|AK058511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G08, full insert sequence Length = 1246 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 166 acgcttctcgaccttctggatct 188 ||||||||||| ||||||||||| Sbjct: 958 acgcttctcgagcttctggatct 936
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 166 acgcttctcgaccttctggatct 188 ||||||||||| ||||||||||| Sbjct: 13446459 acgcttctcgagcttctggatct 13446437
>gb|AF010583.1|AF010583 Oryza sativa 2-oxoglutarate/malate translocator mRNA, partial cds Length = 949 Score = 38.2 bits (19), Expect = 9.8 Identities = 31/35 (88%) Strand = Plus / Minus Query: 154 ttaaaggccgacacgcttctcgaccttctggatct 188 ||||||||| | || |||||||| ||||||||||| Sbjct: 657 ttaaaggcctaaacccttctcgagcttctggatct 623
>emb|AL627392.12| Mouse DNA sequence from clone RP23-185I12 on chromosome 4, complete sequence Length = 182520 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 atagcatggcactttaaag 159 ||||||||||||||||||| Sbjct: 132944 atagcatggcactttaaag 132962
>emb|AL929408.3| Mouse DNA sequence from clone RP23-456B2 on chromosome 4, complete sequence Length = 196915 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 gtacagattttgtctatca 74 ||||||||||||||||||| Sbjct: 187977 gtacagattttgtctatca 187959 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,395,178 Number of Sequences: 3902068 Number of extensions: 1395178 Number of successful extensions: 93756 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93642 Number of HSP's gapped (non-prelim): 114 length of query: 197 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 175 effective length of database: 17,147,199,772 effective search space: 3000759960100 effective search space used: 3000759960100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)