ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29e24 |
|---|---|
| Clone Library Name | barley_pub |
>MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd| Length = 72 Score = 35.8 bits (81), Expect = 0.028 Identities = 15/43 (34%), Positives = 17/43 (39%) Frame = +2 Query: 8 GRCCSPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGR 136 G CC PC C PC P P P P C + + G R Sbjct: 26 GPCCGPCCGPCGPCCGPCGPRCGPCGPCGPCCGTMEKRNGLQR 68
>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 35.0 bits (79), Expect = 0.049 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 11/74 (14%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRLRHREQ-----GHWPGHQ------ALPRPVPPCASGAVQPGLP 88 +GH+ +HQHQ P HR+Q GH HQ A PR S + Sbjct: 176 RGHQHQHQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARPRGSNQGHSSSRHQADS 235 Query: 87 GRVGAVDGEQGRGQ 46 RV A G GRGQ Sbjct: 236 PRVSARSGSGGRGQ 249
>OST6_HUMAN (Q96QI5) Heparan sulfate glucosamine 3-O-sulfotransferase 6 (EC| 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 6) (Heparan sulfate 3-O-sulfotransferase 6) (h3-OST-6) Length = 342 Score = 32.7 bits (73), Expect = 0.24 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 17 CSPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQG 124 C P AR + P P PS++ RPG+PG G Sbjct: 51 CPPAARAPAPAPAPSEPSSSVHRPGAPGLPLASGPG 86
>ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) Length = 670 Score = 32.7 bits (73), Expect = 0.24 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -1 Query: 158 GQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRD 54 G +++ + SH R+ P PD ++E + WT+ RD Sbjct: 221 GHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRD 255
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 32.3 bits (72), Expect = 0.32 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = -3 Query: 207 QGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQG 55 QG GG + G+ PG Q L P A+ A PG G G G+QG Sbjct: 218 QGPGGYGPGQQGPGGYGPGQQGLSGPGSAAAAAAAGPGQQGPGGYGPGQQG 268
>ELN_RAT (Q99372) Elastin precursor (Tropoelastin)| Length = 870 Score = 31.2 bits (69), Expect = 0.70 Identities = 22/50 (44%), Positives = 22/50 (44%) Frame = -3 Query: 204 GRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQG 55 G GG L G PG ALP VP GAV LPG V V G G Sbjct: 490 GAGGAGTLGGLVPGAVPG--ALPGAVPGALPGAVPGALPGAVPGVPGTGG 537
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 30.8 bits (68), Expect = 0.92 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 17 CSPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQGG 127 C PC + P P P P PG+PG DA G Sbjct: 56 CKPCPQGRPGPPGPIGPPGEPGTPGNPGAPGNDAPPG 92
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 30.8 bits (68), Expect = 0.92 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 Query: 56 PCSPSTAPTRPGSPGCTAPDAQGGTGRGSA*WPG 157 P PS P PGSPG + P +G G WPG Sbjct: 370 PQGPSGPPGVPGSPGSSRPGLRGAPG-----WPG 398
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 30.8 bits (68), Expect = 0.92 Identities = 18/39 (46%), Positives = 19/39 (48%) Frame = +2 Query: 41 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRGSA*WPG 157 S PRP AP RPGSP AP GG +G PG Sbjct: 195 SNIPRP-----APPRPGSPRIGAPRPGGGQRQGGGGRPG 228
>SPR2H_MOUSE (O70559) Small proline-rich protein 2H| Length = 108 Score = 30.8 bits (68), Expect = 0.92 Identities = 13/34 (38%), Positives = 15/34 (44%) Frame = +2 Query: 11 RCCSPCART*SRCPRPCSPSTAPTRPGSPGCTAP 112 +C PC +CP PC P P P CT P Sbjct: 49 KCPEPCPPP--KCPEPCPPPKCPEPCPPPKCTEP 80 Score = 27.7 bits (60), Expect = 7.8 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = +2 Query: 44 RCPRPCSPSTAPTRPGSPGCTAP 112 +CP PC P P P CT P Sbjct: 22 QCPEPCPPPKCPEPCPPPKCTEP 44
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +2 Query: 41 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 139 +R PRP +P RPG+PG DA GG RG Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +2 Query: 41 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 139 +R PRP +P RPG+PG DA GG RG Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = +2 Query: 8 GRCCSPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQGGT 130 G P T S PRP PS P+ S G T P GT Sbjct: 468 GGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGT 508
>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 498 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 11/68 (16%) Frame = -1 Query: 209 IKDEEGYPAFAIVNKATGQAIKHSLGQ-----SHPVRLVPY------NPDFLDESVLWTE 63 I+ ++ + A+VN + +H L Q +HP + P NP+ D L+ Sbjct: 354 IEVQKSWGLGAVVNAIFEEVAEHQLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIG 413 Query: 62 SRDVGNGF 39 R++GNGF Sbjct: 414 GREIGNGF 421
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 30.4 bits (67), Expect = 1.2 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = +2 Query: 8 GRCCSPCART*SRCPRPCSPSTAPTRPGSPGCT-APDAQGGTGRGSA 145 G C C P P P +P +PG PG AP A G G+G++ Sbjct: 95 GGGCDGCCN-----PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGAS 136
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 30.0 bits (66), Expect = 1.6 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 61 +G + + +G G P L+ + PG P P+ P + + PGLPG GA + Sbjct: 266 RGFDGRNGEKGETGAPGLKG--ENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGND 323 Query: 60 QGRG 49 RG Sbjct: 324 GARG 327
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 30.0 bits (66), Expect = 1.6 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRL-----RHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAV 70 QG E +Q + G P +++ +G QA P P+PP +G+++ G G+ G V Sbjct: 357 QGQEGGYQQRPPGQQPNQTQSQGQYQSRGPPQQQQAAPLPLPPQPAGSIKRGTIGKPGQV 416
>SPR2F_MOUSE (O70557) Small proline-rich protein 2F| Length = 76 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 44 RCPRPCSPSTAPTRPGSPGCTAP 112 +CP PCSPS P P C P Sbjct: 22 KCPEPCSPSVCPEPCPPPKCPEP 44
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 61 +G + + +G G P L+ + PG P P+ P + + PGLPG GA + Sbjct: 265 RGFDGRNGEKGETGAPGLKG--ENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGND 322 Query: 60 QGRG 49 RG Sbjct: 323 GARG 326
>LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 241 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = -3 Query: 216 HQHQGRGGLPRLRHREQGHWPGH-------QALPRPVPPCASGAVQPGLPGRVGA 73 +Q G GG P + G +PGH QA P P P + PG PG GA Sbjct: 27 NQPAGPGGYPGAAY--PGAYPGHAPGAYPGQAPPGPYPGPGAHGAYPGQPGGPGA 79
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Frame = -3 Query: 207 QGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAV--------QPGLPGRVGAVDGEQGR 52 +G GLP + + +PG LP PV P S +PGLPG G + Sbjct: 1177 RGLDGLPG--QKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMK 1234 Query: 51 GQRLQVRAHGEQHLPQL 1 G+ A G LP L Sbjct: 1235 GEAGLPGAPGRDGLPGL 1251
>CRU1_BRANA (P33523) Cruciferin BnC1 precursor (11S globulin) (12S storage| protein) [Contains: Cruciferin BnC1 alpha subunit; Cruciferin BnC1 beta subunit] Length = 490 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -3 Query: 153 GHQALPRPVPPCA-----SGAVQP--GLPGRVGAVDGEQGRGQRLQVRAHGEQ 16 G + R VP CA S QP G P G G+QG+GQ Q + G+Q Sbjct: 95 GEGLMGRVVPGCAETFQDSSVFQPSGGSPSGEGQGQGQQGQGQGHQGQGQGQQ 147
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 29.6 bits (65), Expect = 2.0 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 16/78 (20%) Frame = -3 Query: 207 QGRGGLPRLRHREQGHWPGHQALPR----------PVPPCASGAVQPGLPG-----RVGA 73 QG GLP + Q PG P P PP G +PG PG +G Sbjct: 307 QGPPGLPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGDRGIGG 366 Query: 72 VDGEQG-RGQRLQVRAHG 22 V G G RG++ V A G Sbjct: 367 VPGALGPRGEKGPVGAPG 384
>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein| 2.4) (High sulfur keratin-associated protein 2.4) Length = 128 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Frame = +2 Query: 8 GRCCSPCART*SRCPRPCSPSTAPTRPGS--PGCTAP 112 G CC PC C RP + T RP + P CT P Sbjct: 17 GGCCQPCCCRDPCCCRPVTCQTTVCRPVTCVPRCTRP 53
>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)| (HDC) Length = 290 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = +2 Query: 11 RCCSP-CART*SRCPRPCSPSTAPTRPGSPGCTAPDAQGG 127 RC P T CPR P + T P P C AP+ GG Sbjct: 41 RCPEPKSCDTPPPCPRCPEPKSCDTPPPCPRCPAPELLGG 80
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 61 +G + + +G G P L+ + PG P P+ P + + PGLPG GA + Sbjct: 265 RGFDGRNGEKGETGAPGLKG--ENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGND 322 Query: 60 QGRG 49 RG Sbjct: 323 GARG 326
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 61 +G + + +G G P L+ + PG P P+ P + + PGLPG GA + Sbjct: 110 RGFDGRNGEKGEPGAPGLKG--ENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGND 167 Query: 60 QGRG 49 RG Sbjct: 168 GARG 171
>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)| (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary mucin) (PUM) Length = 1255 Score = 25.0 bits (53), Expect(2) = 2.0 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 10/36 (27%) Frame = +2 Query: 53 RPCSPSTAP----------TRPGSPGCTAPDAQGGT 130 RP STAP TRP +PG TAP A G T Sbjct: 905 RPAPGSTAPPAHGVTSAPDTRP-APGSTAPPAHGVT 939 Score = 23.1 bits (48), Expect(2) = 2.0 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +3 Query: 117 HRVGLAEGVLDGLASGLVHDG 179 H V A G G AS LVH+G Sbjct: 956 HNVTSASGSASGSASTLVHNG 976
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = +2 Query: 65 PSTAPTRPGSPGCTAPDAQGGTGRGSA*WPG 157 P P PG PG AP A G G+ PG Sbjct: 304 PPAPPAAPGGPGAPAPGAPGAPAPGAPAAPG 334
>SFTPA_RAT (P08427) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 29.3 bits (64), Expect = 2.7 Identities = 22/66 (33%), Positives = 26/66 (39%) Frame = -3 Query: 204 GRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQGRGQRLQVRAH 25 G GLP R+ G + P P P PGLPGR G G+R Sbjct: 37 GNHGLPGRDGRD-----GVKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGERGDKGEP 91 Query: 24 GEQHLP 7 GE+ LP Sbjct: 92 GERGLP 97
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -3 Query: 126 PPCASGAVQPGLPGRVGAVDGEQGRGQRLQVRAHGE 19 P G P GR G V G++GR +QVR G+ Sbjct: 46 PASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRDGGK 81
>Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor| Length = 544 Score = 29.3 bits (64), Expect = 2.7 Identities = 26/71 (36%), Positives = 30/71 (42%) Frame = -3 Query: 249 LPALDQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAV 70 +P L G ++ H GRGG+ R R PG LPRP P PGR G Sbjct: 135 IPVLPAGWSNDN-HGGRGGMGRGRWSNGRGGPG--LLPRPGP----------YPGRGGNR 181 Query: 69 DGEQGRGQRLQ 37 G GR Q Q Sbjct: 182 GGFGGRYQNYQ 192
>SASH1_MOUSE (P59808) SAM and SH3 domain-containing protein 1| Length = 1230 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Frame = +2 Query: 41 SRCPRPCSPS-TAPTRPGSPGCTAP 112 S CP P P ++ T PGSP CT P Sbjct: 1016 SDCPSPREPRPSSGTEPGSPACTRP 1040
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 4/53 (7%) Frame = +2 Query: 8 GRCCSPCART*---SRCPRPCSPSTAPTRPGSPGCT-APDAQGGTGRGSA*WP 154 G CC C +T + P P P PGSPG T AP G G A P Sbjct: 81 GECCPVCPQTTPQPTELPYTQGPKGDPGSPGSPGRTGAPGPPGQPGSPGAPGP 133
>CDX2_MESAU (Q04649) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 313 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 5/50 (10%) Frame = -3 Query: 177 HREQGHWPGHQALPRPVPPCASGAVQ---PGLPG--RVGAVDGEQGRGQR 43 H H P H P P CASG +Q PG PG GA + GQR Sbjct: 115 HHHPHHHPHH---PAAAPSCASGLLQTLNPGPPGPAATGAAEQLSPSGQR 161
>CDX2_HUMAN (Q99626) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| (CDX-3) Length = 313 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%) Frame = -3 Query: 177 HREQGHWPGHQALPRPVPPCASGAVQ---PGLPGRVGAVDGEQ 58 H H P H P P CASG +Q PG PG EQ Sbjct: 116 HHHPHHHPHH---PAAAPSCASGLLQTLNPGPPGPAATAAAEQ 155
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 29.3 bits (64), Expect = 2.7 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -3 Query: 156 PGHQALPRPVPPCASGAV-QPGLPGRVGAVDGEQG 55 PGH LP PV P G V PG PG+ G +DG G Sbjct: 387 PGHDGLPGPVGP--RGPVGAPGAPGQPG-IDGMPG 418
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 156 PGHQALPRPV-PPCASGAV-QPGLPGRVGAVDGEQGRGQR 43 PG Q LP P PP +G + G+PG +GA RG+R Sbjct: 640 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 679
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 156 PGHQALPRPV-PPCASGAV-QPGLPGRVGAVDGEQGRGQR 43 PG Q LP P PP +G + G+PG +GA RG+R Sbjct: 629 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 668
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 156 PGHQALPRPV-PPCASGAV-QPGLPGRVGAVDGEQGRGQR 43 PG Q LP P PP +G + G+PG +GA RG+R Sbjct: 629 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 668
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = -3 Query: 156 PGHQALPRPV-PPCASGAV-QPGLPGRVGAVDGEQGRGQR 43 PG Q LP P PP +G + G+PG GA RG+R Sbjct: 629 PGFQGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGER 668
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 156 PGHQALPRPV-PPCASGAV-QPGLPGRVGAVDGEQGRGQR 43 PG Q LP P PP +G + G+PG +GA RG+R Sbjct: 636 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 675
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 156 PGHQALPRPV-PPCASGAV-QPGLPGRVGAVDGEQGRGQR 43 PG Q LP P PP +G + G+PG +GA RG+R Sbjct: 205 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 244
>SYV_PARUW (Q6MAM1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 949 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = -1 Query: 296 VRNGKVVLAPANPKDDYQHWIKDMR-WSTS 210 V+NG+V L P++ + Y HWI ++R W S Sbjct: 376 VQNGQVKLIPSHWESTYFHWIDNLRDWCIS 405
>SYV_NOCFA (Q5Z048) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 893 Score = 28.9 bits (63), Expect = 3.5 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Frame = -1 Query: 296 VRNGKVVLAPANPKDDYQHWIKDMR-WSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSHP 120 VRNG+VV+ PA+ + + W+ +M W+ S + G+ I G+ + G++ P Sbjct: 389 VRNGQVVIHPASQEPRWFEWVDNMHDWTISRQLWWGH-RIPIWYGPDGEVVCLGPGETPP 447 Query: 119 VRLVPYNPDFLD---ESVLW 69 V +PD LD S LW Sbjct: 448 EGWV-QDPDVLDTWFSSGLW 466
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.9 bits (63), Expect = 3.5 Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 11/74 (14%) Frame = -3 Query: 204 GRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ-------PGLPGRVGAVDGEQG--- 55 G GL R P AL PP SG PGLPGR G V GE G Sbjct: 2000 GERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGV-GEAGRPG 2058 Query: 54 -RGQRLQVRAHGEQ 16 RG+R + GEQ Sbjct: 2059 ERGERGEKGERGEQ 2072
>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 841 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/49 (38%), Positives = 20/49 (40%) Frame = -3 Query: 243 ALDQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQP 97 A D G VEH P R R + P PRP PP A A QP Sbjct: 27 AQDGGGPVEHDRSAPADKPAERTRPK---PAPPERPRPPPPRARAAGQP 72
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 28.9 bits (63), Expect = 3.5 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 50 PRPCSPSTAPTRPGSPGCTAPDAQGG 127 P P T P+ +PG T+PD+ GG Sbjct: 635 PPPARGDTPPSEGSAPGSTSPDSPGG 660
>GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-5) (Cellulase E5) Length = 466 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Frame = +2 Query: 56 PCSPSTAPTRPGSPGCTAPD--AQGGTG 133 PC + P PG PG +PD Q GTG Sbjct: 135 PCDEGSEPGGPGGPGTPSPDPGTQPGTG 162
>ZN646_HUMAN (O15015) Zinc finger protein 646| Length = 1829 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = -3 Query: 192 LPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPG 85 LP LR Q H PG +P C G + PG G Sbjct: 860 LPALRSHFQNHRPGEATSAQPFLCCLCGMIFPGRAG 895
>AGALC_ASPNG (Q9UUZ4) Alpha-galactosidase C precursor (EC 3.2.1.22) (Melibiase)| Length = 747 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -3 Query: 141 LPRPVPPCASGAVQPGLPGRVGAVDGEQGRG 49 +P PV P +G V G+PGR+ +QGRG Sbjct: 74 IPSPVEPAVNGWV--GMPGRIRREFPDQGRG 102
>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 467 Score = 28.9 bits (63), Expect = 3.5 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 7/44 (15%) Frame = +2 Query: 8 GRCCSPCART*SRCPR-PCSPSTAPTRPGSP------GCTAPDA 118 G C CA P+ PC P AP PG P C PDA Sbjct: 320 GPCGPDCAPPAPGLPQDPCGPDCAPPAPGLPPDPCGSNCAPPDA 363
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 28.9 bits (63), Expect = 3.5 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -3 Query: 162 HWPGHQALPRPVPPCASGAVQPGLPGRV---GAVDGE 61 H PG A PRP P S +QP P V G + GE Sbjct: 356 HRPGRPAQPRPPSPKTSALLQPKAPTGVDSTGVIAGE 392
>LCE2B_HUMAN (O14633) Late cornified envelope protein 2B (Late envelope protein| 10) (Small proline-rich-like epidermal differentiation complex protein 1B) (Skin-specific protein Xp5) Length = 110 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +2 Query: 44 RCPRPCSPSTAP-TRPGSPGCTAPDAQGGTGRGS 142 +CP PCSP+ + P S GC P + G G+ Sbjct: 35 QCPAPCSPAVSSCCGPISGGCCGPSSGGCCNSGA 68
>SPR2B_MOUSE (O70554) Small proline-rich protein 2B| Length = 98 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/33 (36%), Positives = 13/33 (39%) Frame = +2 Query: 14 CCSPCART*SRCPRPCSPSTAPTRPGSPGCTAP 112 CC PC +CP PC P P C P Sbjct: 41 CCEPCPPP--KCPEPCPPPVCCEPCPPPVCCEP 71
>MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db| Length = 74 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +2 Query: 8 GRCCSPCART*SRCPRPCSPSTAPTRPGSPGC 103 G CCSPC C PC P P P GC Sbjct: 29 GSCCSPC----GSCCAPCGP-CGPCGPCCGGC 55
>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2321 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Frame = +2 Query: 26 CART*SRC-PRPCSPSTAPTRPGSPGCTAPDAQGG 127 CAR C PC P T S CT P GG Sbjct: 884 CARDVDECLSNPCGPGTCTDHVASFTCTCPPGYGG 918
>MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding| protein MBD1) (Protein containing methyl-CpG-binding domain 1) Length = 605 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Frame = -3 Query: 192 LPRLRHRE---QGHW-PGHQALPRPV--PPCASGAVQPGLP 88 LP+++ + Q W PG L PV P C S AV PGLP Sbjct: 495 LPQVKQEKADTQDEWTPGTAVLTSPVLVPGCPSKAVDPGLP 535
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 28.5 bits (62), Expect = 4.5 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 14/81 (17%) Frame = -3 Query: 207 QGRGGLPRLRHR--EQGHW----PGHQALPRPV-------PPCASGAVQPGLPGRVGAVD 67 +G G+P L + E GH PG + LP P PP + GLPG+ G + Sbjct: 176 KGTSGVPGLNGQKGEMGHCTPCRPGERGLPGPQGPTGPPGPPGVGKRGENGLPGQPG-LK 234 Query: 66 GEQG-RGQRLQVRAHGEQHLP 7 G+QG G+R G Q P Sbjct: 235 GDQGVPGERGAAGPSGPQGPP 255 Score = 27.7 bits (60), Expect = 7.8 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -3 Query: 156 PGHQALPR-PVPPCASGAVQPGLPGRVGAVDGEQG 55 PG Q P P PP S +PGLPG G GE+G Sbjct: 88 PGPQGQPGLPGPPGPSATGKPGLPGLPGK-QGERG 121
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +2 Query: 50 PRPCSPSTAPTRPGSPGCTAP 112 PRP P AP RP PG AP Sbjct: 236 PRPPPPRPAPPRPAPPGQAAP 256
>SPR2D_MOUSE (O70555) Small proline-rich protein 2D| Length = 85 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/34 (35%), Positives = 14/34 (41%) Frame = +2 Query: 11 RCCSPCART*SRCPRPCSPSTAPTRPGSPGCTAP 112 +C PC +CP PC P P P C P Sbjct: 22 KCPEPCPPL--KCPEPCPPPKCPEPCPPPKCPEP 53
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.5 bits (62), Expect = 4.5 Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Frame = -3 Query: 249 LPAL--DQGHEVEHQHQGRGGLP-----RLRHREQG--HWPGHQALPRPVPPCASGAVQP 97 LP L D+GH E QG GLP R E G PG +A PR + P Sbjct: 603 LPGLPGDKGHRGERGPQGPPGLPGDDGMRGEDGEIGPRGLPG-EAGPRGLLGPRGTPGPP 661 Query: 96 GLPGRVGAVDGEQG 55 G PG +G +DG QG Sbjct: 662 GQPG-IGGIDGPQG 674
>SSPO_BOVIN (P98167) SCO-spondin (Fragment)| Length = 867 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Frame = +2 Query: 17 CSPCART*SRCPRPCSPSTAPT-RP-GSPGCTAPDAQGGTGRGSA*WPGQ 160 C PC T C +T P RP G PGC P Q +G WP Q Sbjct: 100 CVPCPLT---CDDISGQATCPPDRPCGGPGCWCPAGQVLGAQGRCVWPRQ 146
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Frame = +2 Query: 11 RCCSPCART*SRCP-RPCSPSTAPTRPGSPGC 103 +C PC CP +PC P P P SP C Sbjct: 9 QCPPPCCPPKPCCPPKPCCPQKPPCCPKSPCC 40
>GSLG1_CHICK (Q02391) Golgi apparatus protein 1 precursor (Cysteine-rich| fibroblast growth factor receptor) Length = 1142 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Frame = +2 Query: 20 SPCART*SRCPRPC--SPSTAPTRPGSPGCTAPDAQGGTGRGSA*WPGQ 160 +PC R SRCP P RP G A Q G G +A P Q Sbjct: 2 APCGRVRSRCPGPALLLLLALAARPALAGPPAAALQAGPGLNAAGQPAQ 50
>MYCN_BRARE (Q9PSJ0) N-myc protein (zN-Myc) (Fragment)| Length = 93 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -3 Query: 159 WPGHQALPRPVPPCASGAVQPGLPGRVGAVDGE 61 W + LP P P S A PG PG +GAV G+ Sbjct: 4 WKKFELLPTP-PLSPSRAALPGDPGELGAVAGD 35
>OM3_CHLPS (P27606) Cysteine-rich outer membrane protein 3 precursor (9| kDa-cysteine-rich lipoprotein) (9KD-CRP) Length = 87 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Frame = +2 Query: 17 CSPCART*SRCPRPCSPSTAP--TRPGSPGCTAPDAQ 121 CSPC C +PC P P + GCT+ D + Sbjct: 48 CSPCGVYTPSCSKPCGSECNPGVQGPQAKGCTSLDGR 84
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 28.1 bits (61), Expect = 5.9 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 16/78 (20%) Frame = -3 Query: 207 QGRGGLPRLRHREQGHWPGHQALPR----------PVPPCASGAVQPGLPG-----RVGA 73 QG G+P + Q PG P P PP G +PG PG +G Sbjct: 307 QGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGDRGIGG 366 Query: 72 VDGEQG-RGQRLQVRAHG 22 V G G RG++ + A G Sbjct: 367 VPGVLGPRGEKGPIGAPG 384
>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 50 PRPCSPSTAPTRPGSPGCTAPDAQGG 127 P P T P+ +PG T+PD+ GG Sbjct: 668 PPPPQGDTPPSEGSAPGSTSPDSPGG 693
>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 50 PRPCSPSTAPTRPGSPGCTAPDAQGG 127 P P T P+ +PG T+PD+ GG Sbjct: 668 PPPPQGDTPPSEGSAPGSTSPDSPGG 693
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 28.1 bits (61), Expect = 5.9 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 8/44 (18%) Frame = -3 Query: 153 GHQALPR-PVPP---CASGAV----QPGLPGRVGAVDGEQGRGQ 46 GH P P PP C GA QPGLPG G+ G+GQ Sbjct: 813 GHAGFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPGAPGGKGQ 856
>MS87F_DROME (P08175) Male-specific sperm protein Mst87F| Length = 56 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/37 (32%), Positives = 13/37 (35%) Frame = +2 Query: 14 CCSPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQG 124 CC PC C PC P G C P+ G Sbjct: 2 CCGPCGPCCGPCCGPCCGPCGPCGGGCGPCYGPNVCG 38
>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2319 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Frame = +2 Query: 26 CART*SRC-PRPCSPSTAPTRPGSPGCTAPDAQGG 127 CAR C PC P T S CT P GG Sbjct: 886 CARDVDECLSSPCGPGTCTDHVASFTCTCPPGYGG 920
>POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = +2 Query: 17 CSPCAR--T*SRCPRPCSPSTAPTRPGS 94 C PC R S+C P SP+ A +RPG+ Sbjct: 225 CIPCVRLNNASKCWTPVSPTVAVSRPGA 252
>DNAJ_BRAJA (P94319) Chaperone protein dnaJ| Length = 377 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 96 RVVRHQTHRVGLAEGVLDGLASGLVHDGEGGV 191 RV R +T V + +GV DG L +GE GV Sbjct: 209 RVTRERTLSVNIPQGVEDGTRIRLAGEGEAGV 240
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 5.9 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -3 Query: 246 PALDQGHEVEHQHQGRGGLPRLRHRE-QGHWPGHQALPRPVPPCASGAVQPGLPGRVGAV 70 PA GH+ QG G+P +R PG L P P PG PGR G + Sbjct: 744 PAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQG----LPGTPGRPG-I 798 Query: 69 DGEQG 55 GE G Sbjct: 799 KGEPG 803
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = +2 Query: 17 CSPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQGG 127 C PC + P P P PGSPG DA G Sbjct: 145 CKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPG 181
>SYK_PASMU (P57822) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 501 Score = 28.1 bits (61), Expect = 5.9 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 11/68 (16%) Frame = -1 Query: 209 IKDEEGYPAFAIVNKATGQAIKHSLGQ-----SHPVRLVPY------NPDFLDESVLWTE 63 I+ ++ + ++VN + +H L Q +HP + P NP+ D L+ Sbjct: 357 IEVQKSWGLGSLVNVIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIG 416 Query: 62 SRDVGNGF 39 R++GNGF Sbjct: 417 GREIGNGF 424
>PIGR_BOVIN (P81265) Polymeric-immunoglobulin receptor precursor (Poly-Ig| receptor) (PIGR) [Contains: Secretory component] Length = 757 Score = 28.1 bits (61), Expect = 5.9 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Frame = -1 Query: 266 ANPKDDYQHWIKDMRWSTSIKDEEGYPAF-AIVNKATGQAIKHSLGQSHPVRLVPYNPDF 90 A P+ + Q W + +E PA ++V G ++ S PYNP Sbjct: 326 AQPEGEPQDGWPVQAWQLFVNEETAIPASPSVVKGVRGGSVTVSC---------PYNPKD 376 Query: 89 LDESVLWTESRDVGNGFRCVRMVNN 15 + + W + NG RC R+V + Sbjct: 377 ANSAKYWCHWEEAQNG-RCPRLVES 400
>SFTPA_RABIT (P12842) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 247 Score = 27.7 bits (60), Expect = 7.8 Identities = 22/68 (32%), Positives = 27/68 (39%) Frame = -3 Query: 204 GRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQGRGQRLQVRAH 25 G GLP R+ G + P P P PGLPGR G + G+R Sbjct: 36 GSHGLPGRDGRD-----GVKGDPGPPGPMGPPGGMPGLPGRDGLIGAPGVPGERGDKGEP 90 Query: 24 GEQHLPQL 1 GE+ P L Sbjct: 91 GERGPPGL 98
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = -3 Query: 177 HREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQGRG 49 HR G RP G +PG G VGA G GRG Sbjct: 400 HRNAGPSGPGTGQARPYAKKGPGGARPGTGGPVGARSGGPGRG 442
>CAC1C_RAT (P22002) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (RAT brain class C) (RBC) Length = 2169 Score = 27.7 bits (60), Expect = 7.8 Identities = 20/49 (40%), Positives = 20/49 (40%) Frame = -3 Query: 228 HEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGR 82 H V HQ GL L R H P PRP PP V PG GR Sbjct: 1952 HLVHHQALAVAGLSPLLQRS--HSPSTFPRPRPTPP-----VTPGSRGR 1993
>SPR2D_HUMAN (P22532) Small proline-rich protein 2D (SPR-2D) (Small proline-rich| protein II) (SPR-II) Length = 72 Score = 27.7 bits (60), Expect = 7.8 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = +2 Query: 44 RCPRPCSPSTAPTRPGSPGCTAP 112 +CP PC P P SP C P Sbjct: 22 KCPEPCPPPKCPEPCPSPKCPQP 44
>RELB_CHICK (P51509) Transcription factor RelB homolog| Length = 549 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +2 Query: 44 RCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRGS 142 R P P T PT P C+ ++GG GR S Sbjct: 497 RTPPPTETPTPPTASWGPICSQGTSEGGGGRTS 529
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 27.7 bits (60), Expect = 7.8 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 16/78 (20%) Frame = -3 Query: 207 QGRGGLPRLRHREQGHWPGHQALPR----------PVPPCASGAVQPGLPG-----RVGA 73 QG G+P + Q PG P P PP G +PG PG +G Sbjct: 307 QGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGG 366 Query: 72 VDGEQG-RGQRLQVRAHG 22 V G G RG++ + A G Sbjct: 367 VPGALGPRGEKGPIGAPG 384
>HGFA_CANFA (Q6QNF4) Hepatocyte growth factor activator precursor (EC 3.4.21.-)| (HGF activator) (HGFA) [Contains: Hepatocyte growth factor activator short chain; Hepatocyte growth factor activator long chain] Length = 654 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 56 PCSPSTAPTRPGSPGCTAPDAQGGTGRG 139 P P T+ T P +P +AP+AQG GRG Sbjct: 54 PMIPVTSVT-PVTPATSAPEAQGPRGRG 80
>ADRB3_BOVIN (P46626) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 405 Score = 27.7 bits (60), Expect = 7.8 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = -3 Query: 186 RLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQGRGQR----LQVRAH 25 RL RE G +P P PP S + PGL G + G G+R L +R H Sbjct: 236 RLLRRELGRFP-----PEESPPAPSRSGSPGLAGPCASPAGVPSYGRRPARLLPLREH 288
>ZDHC1_MOUSE (Q8R0N9) Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 1) (DHHC-1) Length = 484 Score = 27.7 bits (60), Expect = 7.8 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +1 Query: 55 SLLSVHSTDSSRKSGLYG--TRRTGWDWPRECL--MAWPVALF 171 S+ + S DS L G +RR GW WP L +AW + LF Sbjct: 16 SVWTAPSQDSGPSPELQGQRSRRNGWSWPPHPLQIVAWLLYLF 58
>SEM5A_MOUSE (Q62217) Semaphorin-5A precursor (Semaphorin F) (Sema F)| Length = 1077 Score = 27.7 bits (60), Expect = 7.8 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -1 Query: 197 EGYPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGN 45 E Y A A+ AI SLG P+R YN +L+E + S D+GN Sbjct: 178 ELYAATAMDFPGRDPAIYRSLGTLPPLRTAQYNSKWLNEP-NFVSSYDIGN 227
>FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related protein FKHL8)| (Forkhead-related transcription factor 4) (FREAC-4) (Brain factor-2) (HFH-BF-2) Length = 456 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 50 PRPCSPSTAPTRPGSPGCTAPDAQGGTGRGS 142 P P P+ AP GS GC+ A GG G G+ Sbjct: 87 PAPPGPAPAPGT-GSGGCSGAGAGGGAGGGT 116
>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)| Length = 290 Score = 27.7 bits (60), Expect = 7.8 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = -3 Query: 234 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQ 58 +G E+ H G GG P ++ P H P P PPC G G P + D Q Sbjct: 87 EGRGQEYFHPG-GGSPAAAYQAAPPPPPHPPPPPPPPPC-GGIACHGEPAKFYGYDNLQ 143
>TECTA_CHICK (Q9YH85) Alpha-tectorin precursor| Length = 2120 Score = 27.7 bits (60), Expect = 7.8 Identities = 17/35 (48%), Positives = 18/35 (51%) Frame = +2 Query: 20 SPCART*SRCPRPCSPSTAPTRPGSPGCTAPDAQG 124 S CA S CP CS TAP R CTAP +G Sbjct: 584 SGCA---SGCPATCSDLTAPLR-----CTAPCPEG 610
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 27.7 bits (60), Expect = 7.8 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 4/81 (4%) Frame = -3 Query: 237 DQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPG----LPGRVGAV 70 + H H H H H P+P PP A+ QP P GA Sbjct: 30 NDNHHASHGHHNSHHPQHHHHHHHHHHHPPPPAPQPPPPRAAQQQQPPPPPLAPQAGGAA 89 Query: 69 DGEQGRGQRLQVRAHGEQHLP 7 +G +L + + H P Sbjct: 90 QSNDEKGPQLLLLPPTDHHRP 110
>SYV_BACST (P11931) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 27.7 bits (60), Expect = 7.8 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Frame = -1 Query: 290 NGKVVLAPANPKDDYQHWIKDMR-WSTSIKDEEGYPAFAIVNKATGQA-IKHSLGQSHPV 117 +GKV P + Y HW++++R W S + G+ A +K TG+ + H + Sbjct: 382 DGKVQFVPERFEKTYLHWLENIRHWCISRQLWWGHRIPAWYHKETGEIYVDHE--PPKDI 439 Query: 116 RLVPYNPDFLD---ESVLW 69 +PD LD S LW Sbjct: 440 ENWEQDPDVLDTWFSSALW 458
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 27.7 bits (60), Expect = 7.8 Identities = 17/60 (28%), Positives = 26/60 (43%) Frame = -3 Query: 237 DQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQ 58 ++G E E H+G+G + +E+G PP +G + LP AVD Q Sbjct: 3242 EKGKEKEKAHKGKGEPLPVPKKEKGE----------APPAGTGTISAPLPAMEYAVDPAQ 3291
>SYV_MYCLE (Q9CBY7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 886 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -1 Query: 296 VRNGKVVLAPANPKDDYQHWIKDMR-WSTS 210 VRNG V+ PA+ + + W+ DMR W S Sbjct: 385 VRNGDTVIHPASMESRWFAWVDDMRDWCIS 414
>B4GN2_HUMAN (Q8NHY0) Beta-1,4 N-acetylgalactosaminyltransferase 2 (EC 2.4.1.-)| (Sd(a) beta-1,4-GalNAc transferase) (UDP-GalNAc:Neu5Aca2-3Galb-R b1,4-N-acetylgalactosaminyltransferase) Length = 566 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = -3 Query: 204 GRGGLPRLRHREQG---HWPGHQALPRPVPPCASGAVQPGLP 88 G+ LP ++ R Q H+ + LPRP+P VQP LP Sbjct: 157 GQSDLPAVKARRQAEFEHFQRREGLPRPLPL----LVQPNLP 194
>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor| Length = 3137 Score = 27.7 bits (60), Expect = 7.8 Identities = 22/65 (33%), Positives = 28/65 (43%) Frame = -3 Query: 246 PALDQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVD 67 PA +QG G+ G P +R G Q +P P +G QPG PG G + Sbjct: 2225 PAGEQGMRGPQGPPGQIGTPGIR--------GEQGIPGP----RAGGGQPGAPGERGRI- 2271 Query: 66 GEQGR 52 G GR Sbjct: 2272 GPLGR 2276
>NTRY_AZOBR (P45675) Nitrogen regulation protein ntrY homolog (EC 2.7.13.3)| Length = 777 Score = 27.7 bits (60), Expect = 7.8 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -3 Query: 207 QGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVG--AVDGEQGR 52 + GG+ L RE G +P+ +PP ASG PG VG A GE+ R Sbjct: 719 EDHGGVLTLEDREGGGARVGLVIPQHIPP-ASGTAAGDAPGGVGTPAETGEEKR 771
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/52 (28%), Positives = 21/52 (40%) Frame = -3 Query: 177 HREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQGRGQRLQVRAHG 22 H H ALP P PP A+ V G+ G + G G + + +G Sbjct: 558 HHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNHYG 609
>TRPG_SERMA (P00900) Anthranilate synthase component II (EC 4.1.3.27)| (Glutamine amido-transferase) Length = 192 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 120 RVGLAEGVLDGLASGLVHDGEG 185 +VG A +L G AS + HDGEG Sbjct: 96 QVGQAGEILHGKASAIAHDGEG 117
>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (38 kDa mitochondrial outer membrane protein) (OM38) Length = 361 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +2 Query: 50 PRPCSPSTAPTRPGSPGCTAPDAQGGTGRGS 142 P P P P PG T P GG G GS Sbjct: 18 PTPSLVGLPPPPPSPPGFTLPPLGGGLGTGS 48 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,144,137 Number of Sequences: 219361 Number of extensions: 816614 Number of successful extensions: 5503 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 4538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5436 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
