ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29e24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 523 bits (264), Expect = e-145 Identities = 288/296 (97%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 495 aagttgaggtagatgttgttcaccatgcgcacgcacctgaacccgttgcccacgtccctg 436 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 435 ctctccgtccacagcaccgactcgtccaggtagtctgggttgtacggcaccagacgcaca 376 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 ||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 375 gggtgtgactggccgagggagtgcttgatggcctgcccggtggccttgttcaccatggcg 316 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 256 Query: 241 tgctggtagtcgtccttggggttggccggcgcgagcaccaccttgccgttgcgcac 296 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 255 tgctggtagtcgtccttggggttggccggcgccagcaccaccttgccgttgcgcac 200
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 392 bits (198), Expect = e-106 Identities = 261/282 (92%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | | Sbjct: 599 aagttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcgg 540 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 |||||||||||||||||||||||||||| | |||||||||||||||||||| | |||| Sbjct: 539 ctctccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccagcctcaca 480 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| Sbjct: 479 gggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagggcg 420 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aaggcagggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccaa 360 Query: 241 tgctggtagtcgtccttggggttggccggcgcgagcaccacc 282 |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 359 tgctggtactcgtccttggggttcgccggcgccagcaccacc 318
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 392 bits (198), Expect = e-106 Identities = 261/282 (92%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | | Sbjct: 598 aagttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcgg 539 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 |||||||||||||||||||||||||||| | |||||||||||||||||||| | |||| Sbjct: 538 ctctccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccagcctcaca 479 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| Sbjct: 478 gggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagggcg 419 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 aaggcagggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccaa 359 Query: 241 tgctggtagtcgtccttggggttggccggcgcgagcaccacc 282 |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 358 tgctggtactcgtccttggggttcgccggcgccagcaccacc 317
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 319 bits (161), Expect = 3e-84 Identities = 257/289 (88%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| ||||| | |||||||||||| ||||| | | Sbjct: 324 aagttgaggtagatgttgttgaccatgcggacgcagcggaagccgttgccgacgtcgcgg 265 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 264 ctctccgtccacagcaccgactcgtccaaaaagtccgggttgtagggcaccaggcgcacc 205 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 ||||||||||| || || |||||||||||||||| || || ||||||||||| | ||| Sbjct: 204 gggtgggactgccccagcgagtgcttgatggcctccccggtcgccttgttcaccagcgcg 145 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || ||||| || ||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 144 aacgccgggtaaccttcctcgtccttgatgctcgtgctccaccgcatgtccttgatccag 85 Query: 241 tgctggtagtcgtccttggggttggccggcgcgagcaccaccttgccgt 289 |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 84 tgctggtactcgtccttggggttcgccggcgccagcaccaccttcccgt 36
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 256 bits (129), Expect = 3e-65 Identities = 156/165 (94%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 28955777 acagggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagg 28955718 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28955717 gcgaaggcagggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 28955658 Query: 238 cagtgctggtagtcgtccttggggttggccggcgcgagcaccacc 282 || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 28955657 caatgctggtactcgtccttggggttcgccggcgccagcaccacc 28955613 Score = 145 bits (73), Expect = 9e-32 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | | Sbjct: 28955976 aagttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcgg 28955917 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 28955916 ctctccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccag 28955864 Score = 145 bits (73), Expect = 9e-32 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| ||||| | |||||| | ||| |||||| || Sbjct: 28940794 aagttgaggtagatgttgttcaccatgcggacgcagcggaagccatggccgacgtccttg 28940735 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||||||||||||||||||||||||||| | ||||||||||| |||||||| Sbjct: 28940734 ctctccgtccacagcaccgactcgtccaggtactccgggttgtatggcaccag 28940682 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| || Sbjct: 28952004 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatccttg 28951945 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||| ||||||||| || | || |||||||| || ||||| Sbjct: 28951944 ctctccgtccacagcacagactcgtcctggtactctgggttgtagggaaccag 28951892 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| | ||| | |||||| | ||| |||||| || Sbjct: 28939792 aagttgaggtagatgttgttgaccatgcggatgcagcggaagccatggccgacgtccttg 28939733 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||| ||||||||||||||||||||| || | || ||||||||||||||||| Sbjct: 28939732 ctctcggtccacagcaccgactcgtcctggtactctgggttgtacggcaccag 28939680 Score = 103 bits (52), Expect = 3e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 ||||||||| ||| |||||||||||||||||||| | || |||||||||||||| | Sbjct: 28940462 acagggtggctctgtccgagggagtgcttgatggcttccccggtggccttgttcaccagc 28940403 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 ||||| || |||||||| ||||||||||||||||| ||||| |||||||||||| | | Sbjct: 28940402 gcgaacgccgggtagccttcctcgtccttgatgctcgtgctgtgcctcatgtccttcacc 28940343 Query: 238 cagtgctg 245 |||||||| Sbjct: 28940342 cagtgctg 28940335 Score = 89.7 bits (45), Expect = 5e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 28951090 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 28951031 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 28951030 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 28950971 Query: 241 tgctg 245 ||||| Sbjct: 28950970 tgctg 28950966 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 28951317 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 28951258 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcac 110 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| Sbjct: 28951257 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcac 28951208 Score = 69.9 bits (35), Expect = 4e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 ||||||||||||||| | ||| ||| ||||||| || | ||||| || |||||||| || Sbjct: 28951777 ggagtgcttgatggcttcgccggtgaccttgttgaccagcgcgaacgccgggtagccttc 28951718 Query: 198 ctcgtccttgatgctggtgctccacctcatgtccttgatccagtgct 244 ||||||| |||| || |||| ||||||||||||||||||||||| Sbjct: 28951717 ctcgtccctgatcttgttgctgtgcctcatgtccttgatccagtgct 28951671 Score = 44.1 bits (22), Expect = 0.25 Identities = 70/86 (81%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| |||||||| |||||||||| ||| |||| ||||| || |||| ||| Sbjct: 28939573 gggtgggattggccgagcgagtgcttgacggcgaggccggtggcgcgattgacgagcgcg 28939514 Query: 181 aaggcggggtagccctcctcgtcctt 206 || || |||| ||||||||||||||| Sbjct: 28939513 aacgccgggtggccctcctcgtcctt 28939488
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 256 bits (129), Expect = 3e-65 Identities = 156/165 (94%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 73314 acagggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagg 73255 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73254 gcgaaggcagggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 73195 Query: 238 cagtgctggtagtcgtccttggggttggccggcgcgagcaccacc 282 || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 73194 caatgctggtactcgtccttggggttcgccggcgccagcaccacc 73150 Score = 145 bits (73), Expect = 9e-32 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | | Sbjct: 73513 aagttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcgg 73454 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 73453 ctctccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccag 73401 Score = 145 bits (73), Expect = 9e-32 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| ||||| | |||||| | ||| |||||| || Sbjct: 58331 aagttgaggtagatgttgttcaccatgcggacgcagcggaagccatggccgacgtccttg 58272 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||||||||||||||||||||||||||| | ||||||||||| |||||||| Sbjct: 58271 ctctccgtccacagcaccgactcgtccaggtactccgggttgtatggcaccag 58219 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| || Sbjct: 69541 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatccttg 69482 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||| ||||||||| || | || |||||||| || ||||| Sbjct: 69481 ctctccgtccacagcacagactcgtcctggtactctgggttgtagggaaccag 69429 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| | ||| | |||||| | ||| |||||| || Sbjct: 57329 aagttgaggtagatgttgttgaccatgcggatgcagcggaagccatggccgacgtccttg 57270 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||| ||||||||||||||||||||| || | || ||||||||||||||||| Sbjct: 57269 ctctcggtccacagcaccgactcgtcctggtactctgggttgtacggcaccag 57217 Score = 103 bits (52), Expect = 3e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 ||||||||| ||| |||||||||||||||||||| | || |||||||||||||| | Sbjct: 57999 acagggtggctctgtccgagggagtgcttgatggcttccccggtggccttgttcaccagc 57940 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 ||||| || |||||||| ||||||||||||||||| ||||| |||||||||||| | | Sbjct: 57939 gcgaacgccgggtagccttcctcgtccttgatgctcgtgctgtgcctcatgtccttcacc 57880 Query: 238 cagtgctg 245 |||||||| Sbjct: 57879 cagtgctg 57872 Score = 89.7 bits (45), Expect = 5e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 68627 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 68568 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 68567 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 68508 Query: 241 tgctg 245 ||||| Sbjct: 68507 tgctg 68503 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 68854 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 68795 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcac 110 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| Sbjct: 68794 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcac 68745 Score = 69.9 bits (35), Expect = 4e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 ||||||||||||||| | ||| ||| ||||||| || | ||||| || |||||||| || Sbjct: 69314 ggagtgcttgatggcttcgccggtgaccttgttgaccagcgcgaacgccgggtagccttc 69255 Query: 198 ctcgtccttgatgctggtgctccacctcatgtccttgatccagtgct 244 ||||||| |||| || |||| ||||||||||||||||||||||| Sbjct: 69254 ctcgtccctgatcttgttgctgtgcctcatgtccttgatccagtgct 69208 Score = 44.1 bits (22), Expect = 0.25 Identities = 70/86 (81%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| |||||||| |||||||||| ||| |||| ||||| || |||| ||| Sbjct: 57110 gggtgggattggccgagcgagtgcttgacggcgaggccggtggcgcgattgacgagcgcg 57051 Query: 181 aaggcggggtagccctcctcgtcctt 206 || || |||| ||||||||||||||| Sbjct: 57050 aacgccgggtggccctcctcgtcctt 57025
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 256 bits (129), Expect = 3e-65 Identities = 156/165 (94%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 1017 acagggtgtgactggccgagggagtgcttgatggcctggccggtggccttgttgacgagg 958 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 gcgaaggcagggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 898 Query: 238 cagtgctggtagtcgtccttggggttggccggcgcgagcaccacc 282 || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 897 caatgctggtactcgtccttggggttcgccggcgccagcaccacc 853 Score = 145 bits (73), Expect = 9e-32 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | | Sbjct: 1216 aagttgaggtagatgttgttcaccatgcggatgcacctgaacccgttccccacgtcgcgg 1157 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1156 ctctccgtccacagcaccgactcgtccatcacctccgggttgtacggcaccag 1104
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 226 bits (114), Expect = 3e-56 Identities = 219/254 (86%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||||| || ||||| | | Sbjct: 935 aagttgaggtagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcgg 876 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || | | ||||||||||||||||| |||| Sbjct: 875 ctctccgtccacagcaccgactcgtcctggtatccggggttgtacggcaccagcttcaca 816 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| | ||| |||||||||||||||||| ||| ||| || |||| |||| |||| Sbjct: 815 gggtggccttcgccttgggagtgcttgatggcctcgccggtgaccctgttgacgagggcg 756 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 755 aaggcggggtagccttcctcgtccttgatgctgttgctgtgcctcatgtccttgatccag 696 Query: 241 tgctggtagtcgtc 254 |||||||| ||||| Sbjct: 695 tgctggtactcgtc 682 Score = 172 bits (87), Expect = 4e-40 Identities = 207/247 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| ||||||||||| |||||| | ||| | ||||| ||||||||||| | | Sbjct: 428 aagttgaggcggatgttgttcagcatgcggatgcagcggaagctcttgcccacgtcgccg 369 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || | ||||||||| ||||| |||| ||| Sbjct: 368 ctctccgtccacagcaccgactcgtccgggtactccgggttgaacggcgccagcttcacc 309 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| |||||||||||||||||||||||| |||| ||||||||||| |||| ||| Sbjct: 308 gggtggccctggccgagggagtgcttgatggcgaggccggtggccttgttgacgagcgcg 249 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||| |||||||||||||||||| ||| ||| | | |||||||||| |||| Sbjct: 248 aacgccgggttgccctcctcgtccttgatcttggcgctgaagcgcatgtccttgtaccag 189 Query: 241 tgctggt 247 ||||||| Sbjct: 188 tgctggt 182
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 226 bits (114), Expect = 3e-56 Identities = 219/254 (86%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||||| || ||||| | | Sbjct: 1010 aagttgaggtagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcgg 951 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || | | ||||||||||||||||| |||| Sbjct: 950 ctctccgtccacagcaccgactcgtcctggtatccggggttgtacggcaccagcttcaca 891 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| | ||| |||||||||||||||||| ||| ||| || |||| |||| |||| Sbjct: 890 gggtggccttcgccttgggagtgcttgatggcctcgccggtgaccctgttgacgagggcg 831 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 830 aaggcggggtagccttcctcgtccttgatgctgttgctgtgcctcatgtccttgatccag 771 Query: 241 tgctggtagtcgtc 254 |||||||| ||||| Sbjct: 770 tgctggtactcgtc 757 Score = 172 bits (87), Expect = 4e-40 Identities = 207/247 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| ||||||||||| |||||| | ||| | ||||| ||||||||||| | | Sbjct: 503 aagttgaggcggatgttgttcagcatgcggatgcagcggaagctcttgcccacgtcgccg 444 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || | ||||||||| ||||| |||| ||| Sbjct: 443 ctctccgtccacagcaccgactcgtccgggtactccgggttgaacggcgccagcttcacc 384 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| |||||||||||||||||||||||| |||| ||||||||||| |||| ||| Sbjct: 383 gggtggccctggccgagggagtgcttgatggcgaggccggtggccttgttgacgagcgcg 324 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||| |||||||||||||||||| ||| ||| | | |||||||||| |||| Sbjct: 323 aacgccgggttgccctcctcgtccttgatcttggcgctgaagcgcatgtccttgtaccag 264 Query: 241 tgctggt 247 ||||||| Sbjct: 263 tgctggt 257
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 218 bits (110), Expect = 8e-54 Identities = 218/254 (85%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||||| || ||||| | | Sbjct: 997 aagttgaggtagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcgg 938 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || | | ||||||||||||||||| |||| Sbjct: 937 ctctccgtccacagcaccgactcgtcctggtatccggggttgtacggcaccagcttcaca 878 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| | ||| |||||||||||||||||| ||| ||| || |||| |||| |||| Sbjct: 877 gggtggccttcgccttgggagtgcttgatggcctcgccggtgaccctgttgacgagggcg 818 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 ||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 817 aaggcggggtacccttcctcgtccttgatgctgttgctgtgcctcatgtccttgatccag 758 Query: 241 tgctggtagtcgtc 254 |||||||| ||||| Sbjct: 757 tgctggtactcgtc 744 Score = 172 bits (87), Expect = 4e-40 Identities = 207/247 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| ||||||||||| |||||| | ||| | ||||| ||||||||||| | | Sbjct: 490 aagttgaggcggatgttgttcagcatgcgaatgcagcggaagctcttgcccacgtcgccg 431 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || | ||||||||| ||||| |||| ||| Sbjct: 430 ctctccgtccacagcaccgactcgtccgggtactccgggttgaacggcgccagcttcacc 371 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| |||||||||||||||||||||||| |||| ||||||||||| |||| ||| Sbjct: 370 gggtggccctggccgagggagtgcttgatggcgaggccggtggccttgttgacgagcgcg 311 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||| |||||||||||||||||| ||| ||| | | |||||||||| |||| Sbjct: 310 aacgccgggttgccctcctcgtccttgatcttggcgctgaagcgcatgtccttgtaccag 251 Query: 241 tgctggt 247 ||||||| Sbjct: 250 tgctggt 244
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 210 bits (106), Expect = 2e-51 Identities = 213/248 (85%), Gaps = 3/248 (1%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| ||||| | |||||| | ||| |||||| || Sbjct: 1091 aagttgaggtagatgttgttcaccatgcggacgcagcggaagccatggccgacgtccttg 1032 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag---acgc 117 |||||||||||||||||||||||||||||| | ||||||||||| |||||||| | Sbjct: 1031 ctctccgtccacagcaccgactcgtccaggtactccgggttgtatggcaccagcctaact 972 Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 ||||||||| ||| |||||||||||||||||||| | || |||||||||||||| | Sbjct: 971 acagggtggctctgtccgagggagtgcttgatggcttccccggtggccttgttcaccagc 912 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 ||||| || |||||||| ||||||||||||||||| ||||| |||||||||||| | | Sbjct: 911 gcgaacgccgggtagccttcctcgtccttgatgctcgtgctgtgcctcatgtccttcacc 852 Query: 238 cagtgctg 245 |||||||| Sbjct: 851 cagtgctg 844 Score = 131 bits (66), Expect = 1e-27 Identities = 172/206 (83%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| | ||| | |||||| | ||| |||||| || Sbjct: 403 aagttgaggtagatgttgttgaccatgcggatgcagcggaagccatggccgacgtccttg 344 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||| ||||||||||||||||||||| || | || ||||||||||||||||| | || Sbjct: 343 ctctcggtccacagcaccgactcgtcctggtactctgggttgtacggcaccag-cttacg 285 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| |||||||| |||||||||| ||| |||| ||||| || |||| ||| Sbjct: 284 gggtgggattggccgagcgagtgcttgacggcgaggccggtggcgcgattgacgagcgcg 225 Query: 181 aaggcggggtagccctcctcgtcctt 206 || || |||| ||||||||||||||| Sbjct: 224 aacgccgggtggccctcctcgtcctt 199
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 188 bits (95), Expect = 7e-45 Identities = 221/263 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| || Sbjct: 785 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatccttg 726 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| ||||||||| || | || |||||||| || ||||| ||| Sbjct: 725 ctctccgtccacagcacagactcgtcctggtactctgggttgtagggaaccagcttcacc 666 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| ||| ||| ||||||||||||||| | ||| ||| ||||||| || | ||| Sbjct: 665 gggtggccctgtccggtggagtgcttgatggcttcgccggtgaccttgttgaccagcgcg 606 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||||||| ||||||||| |||| || |||| ||||||||||||||||||| Sbjct: 605 aacgccgggtagccttcctcgtccctgatcttgttgctgtgcctcatgtccttgatccag 546 Query: 241 tgctggtagtcgtccttggggtt 263 ||||||||||||||| ||||||| Sbjct: 545 tgctggtagtcgtccctggggtt 523 Score = 153 bits (77), Expect = 4e-34 Identities = 203/245 (82%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 266 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 207 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| || ||| Sbjct: 206 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcacaagcttcacg 147 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 146 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 87 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 86 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 27 Query: 241 tgctg 245 ||||| Sbjct: 26 tgctg 22
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 188 bits (95), Expect = 7e-45 Identities = 221/263 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| || Sbjct: 1000 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatccttg 941 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| ||||||||| || | || |||||||| || ||||| ||| Sbjct: 940 ctctccgtccacagcacagactcgtcctggtactctgggttgtagggaaccagcttcacc 881 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| ||| ||| ||||||||||||||| | ||| ||| ||||||| || | ||| Sbjct: 880 gggtggccctgtccggtggagtgcttgatggcttcgccggtgaccttgttgaccagcgcg 821 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||||||| ||||||||| |||| || |||| ||||||||||||||||||| Sbjct: 820 aacgccgggtagccttcctcgtccctgatcttgttgctgtgcctcatgtccttgatccag 761 Query: 241 tgctggtagtcgtccttggggtt 263 ||||||||||||||| ||||||| Sbjct: 760 tgctggtagtcgtccctggggtt 738 Score = 174 bits (88), Expect = 1e-40 Identities = 220/264 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 481 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 422 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| || ||| Sbjct: 421 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcacaagcttcacg 362 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 361 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 302 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 301 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 242 Query: 241 tgctggtagtcgtccttggggttg 264 ||||||| ||||||||||||||| Sbjct: 241 tgctggtgctcgtccttggggttg 218
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 188 bits (95), Expect = 7e-45 Identities = 221/263 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| || Sbjct: 1000 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatccttg 941 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| ||||||||| || | || |||||||| || ||||| ||| Sbjct: 940 ctctccgtccacagcacagactcgtcctggtactctgggttgtagggaaccagcttcacc 881 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| ||| ||| ||||||||||||||| | ||| ||| ||||||| || | ||| Sbjct: 880 gggtggccctgtccggtggagtgcttgatggcttcgccggtgaccttgttgaccagcgcg 821 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||||||| ||||||||| |||| || |||| ||||||||||||||||||| Sbjct: 820 aacgccgggtagccttcctcgtccctgatcttgttgctgtgcctcatgtccttgatccag 761 Query: 241 tgctggtagtcgtccttggggtt 263 ||||||||||||||| ||||||| Sbjct: 760 tgctggtagtcgtccctggggtt 738 Score = 174 bits (88), Expect = 1e-40 Identities = 220/264 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 481 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 422 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| || ||| Sbjct: 421 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcacaagcttcacg 362 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 361 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 302 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 301 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 242 Query: 241 tgctggtagtcgtccttggggttg 264 ||||||| ||||||||||||||| Sbjct: 241 tgctggtgctcgtccttggggttg 218
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 184 bits (93), Expect = 1e-43 Identities = 219/261 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| || Sbjct: 785 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatccttg 726 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| ||||||||| || | || |||||||| || ||||| ||| Sbjct: 725 ctctccgtccacagcacagactcgtcctggtactctgggttgtagggaaccagcttcacc 666 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| ||| ||| ||||||||||||||| | ||| ||| ||||||| || | ||| Sbjct: 665 gggtggccctgtccggtggagtgcttgatggcttcgccggtgaccttgttgaccagcgcg 606 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||||||| ||||||||| |||| || |||| ||||||||||||||||||| Sbjct: 605 aacgccgggtagccttcctcgtccctgatcttgttgctgtgcctcatgtccttgatccag 546 Query: 241 tgctggtagtcgtccttgggg 261 ||||||||||||||| ||||| Sbjct: 545 tgctggtagtcgtccctgggg 525 Score = 153 bits (77), Expect = 4e-34 Identities = 203/245 (82%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 266 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 207 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| || ||| Sbjct: 206 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcacaagcttcacg 147 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 146 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 87 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 86 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 27 Query: 241 tgctg 245 ||||| Sbjct: 26 tgctg 22
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 178 bits (90), Expect = 7e-42 Identities = 213/254 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| ||||| | |||||||| ||| ||||| | | Sbjct: 447 aagttgaggtagatgttgttgaccatgcggacgcagcggaagccgtggccgacgtcgcgg 388 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||||||||||||| || || | |||||||| |||||||| || Sbjct: 387 ctctccgtccacagcaccgactcgtcctggtagccggggttgtagggcaccagcttgacc 328 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| || ||| |||||||||||||||||| ||| ||| || |||| |||| ||| Sbjct: 327 gggtggccctcgccctgggagtgcttgatggcctcgccggtgaccctgttgacgagcgcg 268 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 ||||| ||||| || ||||||||||||| |||| |||| | |||||||||||||||| Sbjct: 267 aaggccgggtacccttcctcgtccttgacgctgttgctgtggcgcatgtccttgatccag 208 Query: 241 tgctggtagtcgtc 254 |||||||| ||||| Sbjct: 207 tgctggtactcgtc 194
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 139 bits (70), Expect = 6e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 137 gggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccct 196 |||||||||||||||||| ||| ||| || |||| |||| |||||||||||||||||| | Sbjct: 11931709 gggagtgcttgatggcctcgccggtgaccctgttgacgagggcgaaggcggggtagcctt 11931768 Query: 197 cctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggtagtcgtc 254 ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 11931769 cctcgtccttgatgctgttgctgtgcctcatgtccttgatccagtgctggtactcgtc 11931826 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||||| || ||||| | | Sbjct: 11931464 aagttgaggtagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcgg 11931523 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | | ||||||||||||||||| Sbjct: 11931524 ctctccgtccacagcaccgactcgtcctggtatccggggttgtacggcaccag 11931576 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| ||||||||||| |||||| | ||| | ||||| ||||||||||| | | Sbjct: 11932080 aagttgaggcggatgttgttcagcatgcggatgcagcggaagctcttgcccacgtcgccg 11932139 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | ||||||||| ||||| |||| Sbjct: 11932140 ctctccgtccacagcaccgactcgtccgggtactccgggttgaacggcgccag 11932192 Score = 93.7 bits (47), Expect = 3e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 129 ctggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggg 188 |||||||||||||||||||||||| |||| ||||||||||| |||| ||||| || || Sbjct: 11932317 ctggccgagggagtgcttgatggcgaggccggtggccttgttgacgagcgcgaacgccgg 11932376 Query: 189 gtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggt 247 || |||||||||||||||||| ||| ||| | | |||||||||| ||||||||||| Sbjct: 11932377 gttgccctcctcgtccttgatcttggcgctgaagcgcatgtccttgtaccagtgctggt 11932435 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 |||||| |||| ||| | |||||||||||||||||||| |||||||| || ||| | Sbjct: 11843006 ggagtgtttgagggcatcgccagtggccttgttcacgagtgcgaaggcaggacggcctgc 11842947 Query: 198 ctcgtccttgatgc 211 |||||||||||||| Sbjct: 11842946 ctcgtccttgatgc 11842933 Score = 46.1 bits (23), Expect = 0.063 Identities = 62/75 (82%) Strand = Plus / Minus Query: 15 gttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacag 74 |||||||| |||| | | || |||| |||||| | |||||||| |||| | |||||||| Sbjct: 11843241 gttgttcatcatgtggatgcgcctgtagccgtcggccacgtccacgctcgcagtccacag 11843182 Query: 75 caccgactcgtccag 89 |||||||||||||| Sbjct: 11843181 gaccgactcgtccag 11843167 Score = 42.1 bits (21), Expect = 0.98 Identities = 33/37 (89%) Strand = Plus / Minus Query: 139 gagtgcttgatggcctggccagtggccttgttcacga 175 |||||||||||||| | ||| |||||||| ||||||| Sbjct: 11852621 gagtgcttgatggcttcgccggtggccttattcacga 11852585
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 139 bits (70), Expect = 6e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 137 gggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccct 196 |||||||||||||||||| ||| ||| || |||| |||| |||||||||||||||||| | Sbjct: 11928472 gggagtgcttgatggcctcgccggtgaccctgttgacgagggcgaaggcggggtagcctt 11928531 Query: 197 cctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggtagtcgtc 254 ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 11928532 cctcgtccttgatgctgttgctgtgcctcatgtccttgatccagtgctggtactcgtc 11928589 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||||| || ||||| | | Sbjct: 11928227 aagttgaggtagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcgg 11928286 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | | ||||||||||||||||| Sbjct: 11928287 ctctccgtccacagcaccgactcgtcctggtatccggggttgtacggcaccag 11928339 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| ||||||||||| |||||| | ||| | ||||| ||||||||||| | | Sbjct: 11928843 aagttgaggcggatgttgttcagcatgcggatgcagcggaagctcttgcccacgtcgccg 11928902 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | ||||||||| ||||| |||| Sbjct: 11928903 ctctccgtccacagcaccgactcgtccgggtactccgggttgaacggcgccag 11928955 Score = 93.7 bits (47), Expect = 3e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 129 ctggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggg 188 |||||||||||||||||||||||| |||| ||||||||||| |||| ||||| || || Sbjct: 11929080 ctggccgagggagtgcttgatggcgaggccggtggccttgttgacgagcgcgaacgccgg 11929139 Query: 189 gtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggt 247 || |||||||||||||||||| ||| ||| | | |||||||||| ||||||||||| Sbjct: 11929140 gttgccctcctcgtccttgatcttggcgctgaagcgcatgtccttgtaccagtgctggt 11929198 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 |||||| |||| ||| | |||||||||||||||||||| |||||||| || ||| | Sbjct: 11839769 ggagtgtttgagggcatcgccagtggccttgttcacgagtgcgaaggcaggacggcctgc 11839710 Query: 198 ctcgtccttgatgc 211 |||||||||||||| Sbjct: 11839709 ctcgtccttgatgc 11839696 Score = 46.1 bits (23), Expect = 0.063 Identities = 62/75 (82%) Strand = Plus / Minus Query: 15 gttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacag 74 |||||||| |||| | | || |||| |||||| | |||||||| |||| | |||||||| Sbjct: 11840004 gttgttcatcatgtggatgcgcctgtagccgtcggccacgtccacgctcgcagtccacag 11839945 Query: 75 caccgactcgtccag 89 |||||||||||||| Sbjct: 11839944 gaccgactcgtccag 11839930 Score = 42.1 bits (21), Expect = 0.98 Identities = 33/37 (89%) Strand = Plus / Minus Query: 139 gagtgcttgatggcctggccagtggccttgttcacga 175 |||||||||||||| | ||| |||||||| ||||||| Sbjct: 11849384 gagtgcttgatggcttcgccggtggccttattcacga 11849348
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 139 bits (70), Expect = 6e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 137 gggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccct 196 |||||||||||||||||| ||| ||| || |||| |||| |||||||||||||||||| | Sbjct: 32971 gggagtgcttgatggcctcgccggtgaccctgttgacgagggcgaaggcggggtagcctt 33030 Query: 197 cctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggtagtcgtc 254 ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 33031 cctcgtccttgatgctgttgctgtgcctcatgtccttgatccagtgctggtactcgtc 33088 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||||| || ||||| | | Sbjct: 32726 aagttgaggtagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcgg 32785 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | | ||||||||||||||||| Sbjct: 32786 ctctccgtccacagcaccgactcgtcctggtatccggggttgtacggcaccag 32838 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| ||||||||||| |||||| | ||| | ||||| ||||||||||| | | Sbjct: 33342 aagttgaggcggatgttgttcagcatgcggatgcagcggaagctcttgcccacgtcgccg 33401 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | ||||||||| ||||| |||| Sbjct: 33402 ctctccgtccacagcaccgactcgtccgggtactccgggttgaacggcgccag 33454 Score = 93.7 bits (47), Expect = 3e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 129 ctggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggg 188 |||||||||||||||||||||||| |||| ||||||||||| |||| ||||| || || Sbjct: 33579 ctggccgagggagtgcttgatggcgaggccggtggccttgttgacgagcgcgaacgccgg 33638 Query: 189 gtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggt 247 || |||||||||||||||||| ||| ||| | | |||||||||| ||||||||||| Sbjct: 33639 gttgccctcctcgtccttgatcttggcgctgaagcgcatgtccttgtaccagtgctggt 33697
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 135 bits (68), Expect = 9e-29 Identities = 170/204 (83%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| ||||| | |||||||||||| ||||| | | Sbjct: 957 aagttgaggtagatgttgttgaccatgcggacgcagcggaagccgttgccgacgtcgcgg 898 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||| ||||| ||||| ||||||||| || ||||||||||||| ||||| || || Sbjct: 897 ctctcggtccagagcacggactcgtcctggtagtccgggttgtagggcacgagcttgacg 838 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||| ||| || ||||||||||| |||| ||| ||| ||||||| |||| ||| Sbjct: 837 gggtggccctgccccgtggagtgcttgagcgcctcgccggtgaccttgttgacgagcgcg 778 Query: 181 aaggcggggtagccctcctcgtcc 204 ||||| |||||||||||||||||| Sbjct: 777 aaggccgggtagccctcctcgtcc 754 Score = 107 bits (54), Expect = 2e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||||||| | || ||||||||||| |||| ||| Sbjct: 339 gggtgggactggccgagggagtgcttgatggcgagccccgtggccttgttgacgagcgcg 280 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||| ||||||||||||| | |||||| | | |||||||||| |||| Sbjct: 279 aacgccggcatgccttcctcgtccttgacccgggtgctgaagcgcatgtccttgtaccag 220 Query: 241 tgctggtagtcgtccttggggttggccggcgcgagcac 278 ||||||| |||||||||||||||| |||| || ||||| Sbjct: 219 tgctggtggtcgtccttggggttgaccggggccagcac 182 Score = 85.7 bits (43), Expect = 7e-14 Identities = 76/87 (87%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| |||||||||||| || Sbjct: 459 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgcccacgtccttg 400 Query: 61 ctctccgtccacagcaccgactcgtcc 87 ||||||||||||||||||||| ||||| Sbjct: 399 ctctccgtccacagcaccgacgcgtcc 373
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 129 bits (65), Expect = 5e-27 Identities = 200/245 (81%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 698 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 639 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| |||||||||| | | || || ||||| |||||| ||| ||| Sbjct: 638 ctctccgtccacagcacagactcgtccatgtactctggattgtagcgcaccaaacggaca 579 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| || Sbjct: 578 gggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagcgcc 519 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 | ||| ||||| || |||||||| || | || ||||| || |||||||||| | |||| Sbjct: 518 atggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacccag 459 Query: 241 tgctg 245 ||||| Sbjct: 458 tgctg 454
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 129 bits (65), Expect = 5e-27 Identities = 200/245 (81%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 698 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 639 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| |||||||||| | | || || ||||| |||||| ||| ||| Sbjct: 638 ctctccgtccacagcacagactcgtccatgtactctggattgtagcgcaccaaacggaca 579 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| || Sbjct: 578 gggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagcgcc 519 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 | ||| ||||| || |||||||| || | || ||||| || |||||||||| | |||| Sbjct: 518 atggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacccag 459 Query: 241 tgctg 245 ||||| Sbjct: 458 tgctg 454
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 129 bits (65), Expect = 5e-27 Identities = 200/245 (81%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 695 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 636 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| |||||||||| | | || || ||||| |||||| ||| ||| Sbjct: 635 ctctccgtccacagcacagactcgtccatgtactctggattgtagcgcaccaaacggaca 576 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| || Sbjct: 575 gggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagcgcc 516 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 | ||| ||||| || |||||||| || | || ||||| || |||||||||| | |||| Sbjct: 515 atggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacccag 456 Query: 241 tgctg 245 ||||| Sbjct: 455 tgctg 451
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 129 bits (65), Expect = 5e-27 Identities = 200/245 (81%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 981 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 922 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| |||||||||| | | || || ||||| |||||| ||| ||| Sbjct: 921 ctctccgtccacagcacagactcgtccatgtactctggattgtagcgcaccaaacggaca 862 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| || Sbjct: 861 gggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagcgcc 802 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 | ||| ||||| || |||||||| || | || ||||| || |||||||||| | |||| Sbjct: 801 atggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacccag 742 Query: 241 tgctg 245 ||||| Sbjct: 741 tgctg 737
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 129 bits (65), Expect = 5e-27 Identities = 200/245 (81%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 738 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 679 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccagacgcaca 120 ||||||||||||||||| |||||||||| | | || || ||||| |||||| ||| ||| Sbjct: 678 ctctccgtccacagcacagactcgtccatgtactctggattgtagcgcaccaaacggaca 619 Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| || Sbjct: 618 gggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagcgcc 559 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 | ||| ||||| || |||||||| || | || ||||| || |||||||||| | |||| Sbjct: 558 atggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacccag 499 Query: 241 tgctg 245 ||||| Sbjct: 498 tgctg 494
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 121 bits (61), Expect = 1e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| |||||||||||||||||| | ||| | |||||| ||||||||||| | | Sbjct: 582 aagttgaggcggatgttgttcaccatgcggatgcagcggaagcccttgcccacgtcgccg 523 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 ||||||||||||||||||||||||||| || | ||||||||| |||||||||| Sbjct: 522 ctctccgtccacagcaccgactcgtcctggtactccgggttgaacggcaccag 470 Score = 113 bits (57), Expect = 3e-22 Identities = 141/169 (83%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||| Sbjct: 369 gggtgggactggccgagggagtgcttgatggcgagcccagtggccttgttgacgagggcg 310 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || |||| ||||||||||||||||| |||||| | | |||||||||| |||| Sbjct: 309 aacgcagggttgccctcctcgtccttgacctgggtgctgaagcgcatgtccttgtaccag 250 Query: 241 tgctggtagtcgtccttggggttggccggcgcgagcaccaccttgccgt 289 ||||||| ||||| |||||||| || || |||||||| ||||||| Sbjct: 249 tgctggtgctcgtcgcgcgggttggcgggggccagcaccacgttgccgt 201
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 111 bits (56), Expect = 1e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||| |||||||| ||||| | |||||||||||| ||||| | | Sbjct: 391 aagttgaggtagatgttgttgaccatgcggacgcagcggaagccgttgccgacgtcgcgg 332 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgta 104 ||||| ||||| ||||| ||||||||| || ||||||||||||| Sbjct: 331 ctctcggtccagagcacggactcgtcctggtagtccgggttgta 288 Score = 81.8 bits (41), Expect = 1e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 ||||||||||| |||| ||| ||| ||||||| |||| |||||||| ||||||||||| Sbjct: 254 ggagtgcttgagcgcctcgccggtgaccttgttgacgagcgcgaaggccgggtagccctc 195 Query: 198 ctcgtccttgatgctggtgctccacctcatgtccttgatccagtgctggtagtcgtcctt 257 ||||||| | | |||||| | | |||||||||| ||||||||||| ||||||||| Sbjct: 194 ctcgtcccgcacccgggtgctgaagcgcatgtccttgtaccagtgctggtggtcgtcctt 135 Query: 258 ggggttggccggcgcgagcac 278 ||||||| |||| || ||||| Sbjct: 134 ggggttgaccggggccagcac 114
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 91.7 bits (46), Expect = 1e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 4 ttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctc 63 |||||||| |||||||| |||||||| ||||| | |||||||| ||| ||||| | | || Sbjct: 128 ttgaggtaaatgttgttgaccatgcggacgcagcggaagccgtggccgacgtcgcggttc 69 Query: 64 tccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||||||||||||||||||||| || | | |||||||| |||||||| Sbjct: 68 tccgtccacagcaccgactcgtcctggtaaccggggttgtagggcaccag 19
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 89.7 bits (45), Expect = 5e-15 Identities = 96/113 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||||||||||||||| | ||| | |||||| |||||||| | | || Sbjct: 1931 aagttgaggtagatgttgttcaccatgcggatgcagcggaagcccttgcccacatgcttg 1872 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcaccag 113 |||||| ||||||| || ||||||||| || | || |||||||| || ||||| Sbjct: 1871 ctctccctccacagtacagactcgtcctggtactctgggttgtagggaaccag 1819 Score = 89.7 bits (45), Expect = 5e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatggcg 180 |||||||||||||||||||||||||||| ||| | || ||||||||||| |||| |||| Sbjct: 1017 gggtgggactggccgagggagtgcttgacggcgagtccggtggccttgttgacgagggcg 958 Query: 181 aaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatccag 240 || || || ||||||| ||||||| | ||||||| ||||||||||||||| |||| Sbjct: 957 aacgccggcatgccctccccgtccttcaccttggtgctgaacctcatgtccttgaaccag 898 Query: 241 tgctg 245 ||||| Sbjct: 897 tgctg 893 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| ||||| |||||| || Sbjct: 1244 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgccgacgtccttg 1185 Query: 61 ctctccgtccacagcaccgactcgtccaggaagtccgggttgtacggcac 110 ||||||||||||||||||||| ||||| | | ||||||||| ||||||| Sbjct: 1184 ctctccgtccacagcaccgacgcgtcctcgtactccgggttgaacggcac 1135 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 ||||||||||||||| | ||| ||| ||||||| || | ||||| || |||||||| || Sbjct: 1704 ggagtgcttgatggcttcgccggtgaccttgttgaccagcgcgaacgccgggtagccttc 1645 Query: 198 ctcgtccttgatgctggtgctccacctcatgtccttgatccagt 241 ||||||| |||| || |||| |||||||||||||||||||| Sbjct: 1644 ctcgtccctgatcttgttgctgtgcctcatgtccttgatccagt 1601
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 85.7 bits (43), Expect = 7e-14 Identities = 76/87 (87%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||| | ||||||| |||||||| | ||| | |||||| |||||||||||| || Sbjct: 209 aagttgaggcgggtgttgttgaccatgcggatgcagcggaagcccttgcccacgtccttg 150 Query: 61 ctctccgtccacagcaccgactcgtcc 87 ||||||||||||||||||||| ||||| Sbjct: 149 ctctccgtccacagcaccgacgcgtcc 123 Score = 69.9 bits (35), Expect = 4e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 gggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacga 175 |||||||||||||||||||||||||||||||| | || ||||||||||| |||| Sbjct: 89 gggtgggactggccgagggagtgcttgatggcgagccccgtggccttgttgacga 35
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 5e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 227675 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 227616 Query: 61 ctctccgtccacagcaccgactcgtcca 88 ||||||||||||||||| |||||||||| Sbjct: 227615 ctctccgtccacagcacagactcgtcca 227588 Score = 63.9 bits (32), Expect = 3e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 ||||||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| Sbjct: 226866 acagggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagc 226807 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 || | ||| ||||| || |||||||| || | || ||||| || |||||||||| | | Sbjct: 226806 gccatggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacc 226747 Query: 238 cagtgctg 245 |||||||| Sbjct: 226746 cagtgctg 226739
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 79.8 bits (40), Expect = 5e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 |||||||||||||||||||||||||| | | ||||| || || | || ||||||||| Sbjct: 69345 aagttgaggtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctg 69286 Query: 61 ctctccgtccacagcaccgactcgtcca 88 ||||||||||||||||| |||||||||| Sbjct: 69285 ctctccgtccacagcacagactcgtcca 69258 Score = 63.9 bits (32), Expect = 3e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 118 acagggtgggactggccgagggagtgcttgatggcctggccagtggccttgttcacgatg 177 ||||||||||| ||||||| ||||||||||| ||| | ||| ||||||||||| |||| Sbjct: 68536 acagggtgggattggccgatggagtgcttgagggcgtcgccggtggccttgttgacgagc 68477 Query: 178 gcgaaggcggggtagccctcctcgtccttgatgctggtgctccacctcatgtccttgatc 237 || | ||| ||||| || |||||||| || | || ||||| || |||||||||| | | Sbjct: 68476 gccatggcagggtacccttcctcgtctttcactctcgtgctgtacttcatgtccttcacc 68417 Query: 238 cagtgctg 245 |||||||| Sbjct: 68416 cagtgctg 68409
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 133 ccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtag 192 |||||||||||||||||||| |||| |||||||||||||| | ||||| || ||||| Sbjct: 162328 ccgagggagtgcttgatggcttggctggtggccttgttcaccagcgcgaacgccaggtag 162387 Query: 193 ccctcctcgtccttga 208 || |||| |||||||| Sbjct: 162388 ccttccttgtccttga 162403 Score = 58.0 bits (29), Expect = 2e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||| |||||| || ||||| | |||||||| ||| | || | || Sbjct: 161971 aagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgttcttg 162027 Query: 61 ctctccgtccacagcaccgactc 83 ||||||| ||||||||||||||| Sbjct: 162028 ctctccgcccacagcaccgactc 162050
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 133 ccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtag 192 |||||||||||||||||||| |||| |||||||||||||| | ||||| || ||||| Sbjct: 56395 ccgagggagtgcttgatggcttggctggtggccttgttcaccagcgcgaacgccaggtag 56454 Query: 193 ccctcctcgtccttga 208 || |||| |||||||| Sbjct: 56455 ccttccttgtccttga 56470 Score = 58.0 bits (29), Expect = 2e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||| |||||| || ||||| | |||||||| ||| | || | || Sbjct: 56038 aagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgttcttg 56094 Query: 61 ctctccgtccacagcaccgactc 83 ||||||| ||||||||||||||| Sbjct: 56095 ctctccgcccacagcaccgactc 56117
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 133 ccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtag 192 |||||||||||||||||||| |||| |||||||||||||| | ||||| || ||||| Sbjct: 4394787 ccgagggagtgcttgatggcttggctggtggccttgttcaccagcgcgaacgccaggtag 4394846 Query: 193 ccctcctcgtccttga 208 || |||| |||||||| Sbjct: 4394847 ccttccttgtccttga 4394862 Score = 58.0 bits (29), Expect = 2e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||| |||||| || ||||| | |||||||| ||| | || | || Sbjct: 4394430 aagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgttcttg 4394486 Query: 61 ctctccgtccacagcaccgactc 83 ||||||| ||||||||||||||| Sbjct: 4394487 ctctccgcccacagcaccgactc 4394509
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 133 ccgagggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtag 192 |||||||||||||||||||| |||| |||||||||||||| | ||||| || ||||| Sbjct: 4395608 ccgagggagtgcttgatggcttggctggtggccttgttcaccagcgcgaacgccaggtag 4395667 Query: 193 ccctcctcgtccttga 208 || |||| |||||||| Sbjct: 4395668 ccttccttgtccttga 4395683 Score = 58.0 bits (29), Expect = 2e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Plus Query: 1 aagttgaggtagatgttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctg 60 ||||||||||||||||| |||||| || ||||| | |||||||| ||| | || | || Sbjct: 4395251 aagttgaggtagatgtt---caccatccggacgcagcggaagccgtggccgatgttcttg 4395307 Query: 61 ctctccgtccacagcaccgactc 83 ||||||| ||||||||||||||| Sbjct: 4395308 ctctccgcccacagcaccgactc 4395330
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 138 ggagtgcttgatggcctggccagtggccttgttcacgatggcgaaggcggggtagccctc 197 |||||| |||| ||| | |||||||||||||||||||| |||||||| || ||| | Sbjct: 67647 ggagtgtttgagggcatcgccagtggccttgttcacgagtgcgaaggcaggacggcctgc 67706 Query: 198 ctcgtccttgatgc 211 |||||||||||||| Sbjct: 67707 ctcgtccttgatgc 67720 Score = 46.1 bits (23), Expect = 0.063 Identities = 62/75 (82%) Strand = Plus / Plus Query: 15 gttgttcaccatgcgcacgcacctgaagccgttgcccacgtccctgctctccgtccacag 74 |||||||| |||| | | || |||| |||||| | |||||||| |||| | |||||||| Sbjct: 67412 gttgttcatcatgtggatgcgcctgtagccgtcggccacgtccacgctcgcagtccacag 67471 Query: 75 caccgactcgtccag 89 |||||||||||||| Sbjct: 67472 gaccgactcgtccag 67486 Score = 42.1 bits (21), Expect = 0.98 Identities = 33/37 (89%) Strand = Plus / Plus Query: 139 gagtgcttgatggcctggccagtggccttgttcacga 175 |||||||||||||| | ||| |||||||| ||||||| Sbjct: 58032 gagtgcttgatggcttcgccggtggccttattcacga 58068
>dbj|AB205052.1| Chrysanthemum x morifolium ZDS mRNA for zeta-carotene desaturase, complete cds Length = 2144 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 tccacctcatgtccttgatcca 239 |||||||||||||||||||||| Sbjct: 562 tccacctcatgtccttgatcca 541
>gb|DQ412572.1| Lycopersicon esculentum zeta-carotene desaturase (ZDS) mRNA, complete cds Length = 1850 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 tccacctcatgtccttgatcca 239 |||||||||||||||||||||| Sbjct: 317 tccacctcatgtccttgatcca 296
>dbj|AB180798.1| Actinobacterium Aac-15 gene for DNA gyrase subunit B, partial cds Length = 1197 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 aggcggggtagccctcctcgtccttg 207 ||||||||| |||||||||||||||| Sbjct: 343 aggcggggttgccctcctcgtccttg 318
>emb|X89897.1|CAZDSGENE C.annuum mRNA for zeta-carotene / neurosporene dehydrogenase Length = 1982 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 tccacctcatgtccttgatcca 239 |||||||||||||||||||||| Sbjct: 326 tccacctcatgtccttgatcca 305
>gb|AF195507.1|AF195507 Lycopersicon esculentum zeta-carotene desaturase (zds) mRNA, complete cds Length = 1931 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 tccacctcatgtccttgatcca 239 |||||||||||||||||||||| Sbjct: 417 tccacctcatgtccttgatcca 396
>emb|X97189.1|CACCEL3 Capsicum annuum mRNA for endo-beta-1,4-glucanase, ccel3 Length = 2352 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cccacgtccctgctctccgtccaca 73 ||||||||||||||||| ||||||| Sbjct: 382 cccacgtccctgctctctgtccaca 406
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 0.98 Identities = 30/33 (90%) Strand = Plus / Plus Query: 65 ccgtccacagcaccgactcgtccaggaagtccg 97 |||||||||||| ||||| ||||||||||||| Sbjct: 30507 ccgtccacagcagcgactgctccaggaagtccg 30539
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ggttgtacggcaccagacgc 117 |||||||||||||||||||| Sbjct: 171151 ggttgtacggcaccagacgc 171170
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 agcaccaccttgccgttgcg 293 |||||||||||||||||||| Sbjct: 23956 agcaccaccttgccgttgcg 23975
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 agcaccaccttgccgttgcg 293 |||||||||||||||||||| Sbjct: 23957 agcaccaccttgccgttgcg 23976
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 agcaccaccttgccgttgcg 293 |||||||||||||||||||| Sbjct: 23957 agcaccaccttgccgttgcg 23976
>dbj|AB017370.1| Gentiana lutea mRNA for zeta-Carotene Desaturase, complete cds Length = 2228 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tccacctcatgtccttgatc 237 |||||||||||||||||||| Sbjct: 539 tccacctcatgtccttgatc 520
>gb|AY118358.1| Drosophila melanogaster RE04357 full insert cDNA Length = 4217 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ggttgtacggcaccagacgc 117 |||||||||||||||||||| Sbjct: 2391 ggttgtacggcaccagacgc 2372
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ggttgtacggcaccagacgc 117 |||||||||||||||||||| Sbjct: 43414 ggttgtacggcaccagacgc 43433
>ref|NM_167312.1| Drosophila melanogaster CG10353-RB, transcript variant B (CG10353), mRNA Length = 4660 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ggttgtacggcaccagacgc 117 |||||||||||||||||||| Sbjct: 2850 ggttgtacggcaccagacgc 2831
>ref|NM_132534.1| Drosophila melanogaster CG10353-RA, transcript variant A (CG10353), mRNA Length = 4378 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ggttgtacggcaccagacgc 117 |||||||||||||||||||| Sbjct: 2568 ggttgtacggcaccagacgc 2549
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 tgcccacgtccctgctctccgtcc 70 |||||||||||||| ||||||||| Sbjct: 16708161 tgcccacgtccctgatctccgtcc 16708184 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 accaccttgccgttgcgcac 296 |||||||||||||||||||| Sbjct: 11769876 accaccttgccgttgcgcac 11769857
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 atggcctggccagtggcctt 167 |||||||||||||||||||| Sbjct: 106558 atggcctggccagtggcctt 106539
>ref|XM_316089.2| Anopheles gambiae str. PEST ENSANGP00000005867 (ENSANGG00000004462), partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gatgctggtgctccacctcatgtc 230 |||||||||||||||| ||||||| Sbjct: 591 gatgctggtgctccacgtcatgtc 568
>dbj|AK102139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085J19, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 tgcccacgtccctgctctccgtcc 70 |||||||||||||| ||||||||| Sbjct: 176 tgcccacgtccctgatctccgtcc 153
>dbj|AK063869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-E07, full insert sequence Length = 655 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 tgcccacgtccctgctctccgtcc 70 |||||||||||||| ||||||||| Sbjct: 173 tgcccacgtccctgatctccgtcc 150
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ggttgtacggcaccagacgc 117 |||||||||||||||||||| Sbjct: 170855 ggttgtacggcaccagacgc 170874
>dbj|AP002989.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-475J2, complete sequence Length = 107893 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cttgatggcctggccagtgg 163 |||||||||||||||||||| Sbjct: 44732 cttgatggcctggccagtgg 44751
>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-281I13 (complete covert by PAC RP1-253P07), complete sequence Length = 159876 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 atggcctggccagtggcctt 167 |||||||||||||||||||| Sbjct: 53311 atggcctggccagtggcctt 53330
>gb|DQ192189.1| Daucus carota subsp. sativus putative zeta carotene desaturase (ZDS2) mRNA, complete cds Length = 2038 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tccacctcatgtccttgatc 237 |||||||||||||||||||| Sbjct: 388 tccacctcatgtccttgatc 369 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,008,843 Number of Sequences: 3902068 Number of extensions: 2008843 Number of successful extensions: 40542 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40036 Number of HSP's gapped (non-prelim): 476 length of query: 296 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 274 effective length of database: 17,147,199,772 effective search space: 4698332737528 effective search space used: 4698332737528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
