ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal29e23 |
|---|---|
| Clone Library Name | barley_pub |
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 52.8 bits (125), Expect = 9e-07 Identities = 40/114 (35%), Positives = 50/114 (43%), Gaps = 1/114 (0%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 +E LDLSHN+LSG IP G IPTG Q QT P S + GN G Sbjct: 583 LEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIPTGVQFQTF--PNSSFEGNQG 640 Query: 470 LCGSPLSWNCSQPEQVP-TTRERQGDAMSDMVSFFLATGSGYVMGLWVVFCTFL 312 LCG S C +Q P + + + +V+ + TG G V L V L Sbjct: 641 LCGEHAS-PCHITDQSPHGSAVKSKKNIRKIVAVAVGTGLGTVFLLTVTLLIIL 693
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/77 (38%), Positives = 34/77 (44%) Frame = -3 Query: 641 LDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLCG 462 LDLSHN+L G +P G IP G QL T P S Y N GLCG Sbjct: 692 LDLSHNNLQGYLPGSLGSLSFLSDLDVSNNNLTGPIPFGGQLTTF--PVSRYANNSGLCG 749 Query: 461 SPLSWNCSQPEQVPTTR 411 PL S P + T+R Sbjct: 750 VPLRPCGSAPRRPITSR 766
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 46.6 bits (109), Expect = 7e-05 Identities = 27/68 (39%), Positives = 32/68 (47%) Frame = -3 Query: 644 SLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLC 465 SLDLSHN LSG IP G+IPTG LE A+ + N LC Sbjct: 307 SLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLE--ATSFSDNQCLC 364 Query: 464 GSPLSWNC 441 G PL+ +C Sbjct: 365 GGPLTTSC 372
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 46.2 bits (108), Expect = 9e-05 Identities = 26/63 (41%), Positives = 28/63 (44%) Frame = -3 Query: 641 LDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLCG 462 LDLSHNDL G +P G IP G QL T P + Y N GLCG Sbjct: 692 LDLSHNDLQGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTF--PLTRYANNSGLCG 749 Query: 461 SPL 453 PL Sbjct: 750 VPL 752
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/77 (36%), Positives = 32/77 (41%) Frame = -3 Query: 638 DLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLCGS 459 D S N L G+IP G IP QL TL PA+ Y NPGLCG Sbjct: 665 DASDNRLQGQIPESFSNLSFLVQIDLSNNELTGPIPQRGQLSTL--PATQYANNPGLCGV 722 Query: 458 PLSWNCSQPEQVPTTRE 408 PL + Q+P E Sbjct: 723 PLPECKNGNNQLPAGTE 739
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/63 (36%), Positives = 27/63 (42%) Frame = -3 Query: 641 LDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLCG 462 LDLS N L G IP G IP Q +T P + ++ NPGLCG Sbjct: 707 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETF--PPAKFLNNPGLCG 764 Query: 461 SPL 453 PL Sbjct: 765 YPL 767
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 38.1 bits (87), Expect = 0.023 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 +E+LDLS+N LSG IP G IP+G Q QT P S + N Sbjct: 573 LEALDLSNNRLSGSIPVSLQQLSFLSKFSVAYNNLSGVIPSGGQFQTF--PNSSFESN-H 629 Query: 470 LCGSPLSWNCSQ-PEQVPTTRERQGDAMSDMVSFFLATGSGYVMGL 336 LCG + CS+ E R R+ ++ +A GS +++ L Sbjct: 630 LCGEH-RFPCSEGTESALIKRSRRSRGGDIGMAIGIAFGSVFLLTL 674
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 37.0 bits (84), Expect = 0.052 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Frame = -3 Query: 653 QVESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPA-SIYIGN 477 Q+E LD+S N LSGEIP RG++P+ Q DP+ ++ GN Sbjct: 749 QLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQ---DPSKALLSGN 805 Query: 476 PGLCGSPLSWNCSQPEQVPTTRERQGDAMSDMVSFFLATGSGYVMGLWVVFCTFLFK-RR 300 LCG + +C ++ T+ R + +G ++G ++ F+F RR Sbjct: 806 KELCGRVVGSDC----KIEGTKLRSAWGI-----------AGLMLGFTIIVFVFVFSLRR 850 Query: 299 W 297 W Sbjct: 851 W 851
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 37.0 bits (84), Expect = 0.052 Identities = 23/63 (36%), Positives = 30/63 (47%) Frame = -3 Query: 641 LDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLCG 462 LDL+HN ++G IP G IPTG +LQT + + Y N LCG Sbjct: 267 LDLNHNGITGNIP-VQWTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYS--YFHNKCLCG 323 Query: 461 SPL 453 +PL Sbjct: 324 APL 326
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 35.4 bits (80), Expect = 0.15 Identities = 21/66 (31%), Positives = 27/66 (40%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 + LDL +N + G +P G+IP G LQ + S Y N Sbjct: 275 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD--VSAYANNKC 332 Query: 470 LCGSPL 453 LCGSPL Sbjct: 333 LCGSPL 338
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 35.4 bits (80), Expect = 0.15 Identities = 21/66 (31%), Positives = 27/66 (40%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 + LDL +N + G +P G+IP G LQ + S Y N Sbjct: 275 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD--VSAYANNKC 332 Query: 470 LCGSPL 453 LCGSPL Sbjct: 333 LCGSPL 338
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 34.7 bits (78), Expect = 0.26 Identities = 28/112 (25%), Positives = 39/112 (34%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 V LDLS+N +G IP G IP T D N Sbjct: 713 VAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPD---YRFANNS 769 Query: 470 LCGSPLSWNCSQPEQVPTTRERQGDAMSDMVSFFLATGSGYVMGLWVVFCTF 315 LCG PL CS + + ++ ++ +A G L+ +FC F Sbjct: 770 LCGYPLPLPCSSGPKSDANQHQKSHRRQASLAGSVAMGL-----LFSLFCIF 816
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 34.7 bits (78), Expect = 0.26 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = -3 Query: 644 SLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLC 465 SLD++HN + G IP G+IP G +LQ+ ++ + Y N LC Sbjct: 266 SLDINHNKIYGSIP-VEFTQLNFQFLNVSYNRLCGQIPVGGKLQSFDEYS--YFHNRCLC 322 Query: 464 GSPL 453 G+PL Sbjct: 323 GAPL 326
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC 2.7.11.1)| (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 34.3 bits (77), Expect = 0.34 Identities = 28/112 (25%), Positives = 39/112 (34%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 V LDLS+N +G IP G IP T D N Sbjct: 713 VAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPD---YRFANNS 769 Query: 470 LCGSPLSWNCSQPEQVPTTRERQGDAMSDMVSFFLATGSGYVMGLWVVFCTF 315 LCG PL CS + + ++ ++ +A G L+ +FC F Sbjct: 770 LCGYPLPIPCSSGPKSDANQHQKSHRRQASLAGSVAMGL-----LFSLFCIF 816
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 33.5 bits (75), Expect = 0.57 Identities = 20/66 (30%), Positives = 27/66 (40%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 + LDL +N + G +P G+IP G L+ + S Y N Sbjct: 275 LNGLDLRNNRIYGTLPQGLTQLKFLQSLNVSFNNLCGEIPQGGNLKRFD--VSSYANNKC 332 Query: 470 LCGSPL 453 LCGSPL Sbjct: 333 LCGSPL 338
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 32.7 bits (73), Expect = 0.98 Identities = 32/102 (31%), Positives = 43/102 (42%) Frame = -3 Query: 641 LDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPGLCG 462 LDLS N SGEIP GKIP L + A +IGNPGLC Sbjct: 552 LDLSSNQFSGEIP-LELQNLKLNVLNLSYNHLSGKIP---PLYANKIYAHDFIGNPGLC- 606 Query: 461 SPLSWNCSQPEQVPTTRERQGDAMSDMVSFFLATGSGYVMGL 336 L C + TR + + +++ FL G +V+G+ Sbjct: 607 VDLDGLCRK-----ITRSKNIGYVWILLTIFLLAGLVFVVGI 643
>LY75_MOUSE (Q60767) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)| Length = 1723 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = +3 Query: 267 IVAQRVPSSSPSPLEQECAKDHPETHHISRTRGEEKRNHVAHCISLALSGSWNLLGL 437 I R + +P ++ C K HP+ H +S EE V + SW +LG+ Sbjct: 1261 ITNNRHKTVTPEEVQSTCEKLHPKAHSLSIRNEEENTFVVEQLLYFNYIASWVMLGI 1317
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 31.2 bits (69), Expect = 2.8 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -3 Query: 650 VESLDLSHNDLSGEIPXXXXXXXXXXXXXXXXXXXRGKIPTGNQLQTLEDPASIYIGNPG 471 + +LD++HN ++G IP G+IP G +Q + + + N Sbjct: 264 LNNLDMNHNGITGSIP-AEWSKAYFQLLNVSYNRLCGRIPKGEYIQRFDSYS--FFHNKC 320 Query: 470 LCGSPL 453 LCG+PL Sbjct: 321 LCGAPL 326
>PEX3_DEBHA (Q6BK00) Peroxisomal biogenesis factor 3 (Peroxin-3)| Length = 420 Score = 31.2 bits (69), Expect = 2.8 Identities = 25/95 (26%), Positives = 49/95 (51%) Frame = +3 Query: 237 SHLHINMVIQIVAQRVPSSSPSPLEQECAKDHPETHHISRTRGEEKRNHVAHCISLALSG 416 +HL I ++ Q + + +S+P+P QE + T +++ + + ++H +SL+ + Sbjct: 85 NHLPIELITQALKLKKTNSNPTP--QEISDSLLTTDNLTMHQNTNDSSDLSHYMSLSKTE 142 Query: 417 SWNLLGL*TIP*ERRTAEARVADINRCRVLKRLQL 521 W LL + T+ RT + I+ +L RLQL Sbjct: 143 LWKLLKIKTL---TRTL-TLMYSISGLLLLTRLQL 173
>SEPP1_MOUSE (P70274) Selenoprotein P precursor (SeP) (Plasma selenoprotein P)| Length = 380 Score = 31.2 bits (69), Expect = 2.8 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Frame = +3 Query: 201 TINSTSKGSPGNSHL--HINMVIQIVAQRVPSSSPSPLEQECAKDHPETHHISRTRGEEK 374 T N T++ S +SH H + + PS + P E HH R RG+ + Sbjct: 193 TANKTAEPSEAHSHHKHHNKHGQEHLGSSKPSENQQPGPSETTLPPSGLHHHHRHRGQHR 252 Query: 375 RNHVAHCISLALSG 416 + H+ C + A G Sbjct: 253 QGHLESCDTTASEG 266
>MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 8) Length = 544 Score = 30.0 bits (66), Expect = 6.3 Identities = 18/65 (27%), Positives = 23/65 (35%) Frame = +3 Query: 225 SPGNSHLHINMVIQIVAQRVPSSSPSPLEQECAKDHPETHHISRTRGEEKRNHVAHCISL 404 SP +HLH + R P P P Q P H R R + A + Sbjct: 362 SPSQAHLHKPRADPQLPSRTPVQGPRPRPQSSPGHDPAEHESPRAAKNVPRQNSAPLLQT 421 Query: 405 ALSGS 419 AL G+ Sbjct: 422 ALLGN 426
>HIG_DROME (Q09101) Locomotion-related protein Hikaru genki precursor| Length = 958 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +3 Query: 276 QRVPSSSPSPLEQECAKDHPET---HHISRTRGEEKRNHVAHCISLALSGSW 422 ++VP + +P E E DHPET HH R RG+ +H A S W Sbjct: 289 EKVPENGQTPKEDELELDHPETAAAHH--RRRGD---SHAAELDQRDRSPRW 335 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,945,512 Number of Sequences: 219361 Number of extensions: 2264039 Number of successful extensions: 6068 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5691 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6061 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
