ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29d20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009282.1| Triticum aestivum clone wlm0.pk0003.f3:fis, full ... 835 0.0
2dbj|AK103000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 7e-93
3dbj|AK065099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 7e-93
4dbj|AK073276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
5dbj|AK067814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
6gb|AY105293.1| Zea mays PCO121721 mRNA sequence 311 1e-81
7gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genom... 184 2e-43
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 184 2e-43
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
10ref|NM_011723.2| Mus musculus xanthine dehydrogenase (Xdh), mRNA 42 2.0
11gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 42 2.0
12gb|BC065699.1| Mus musculus cDNA clone IMAGE:4009388, **** WARNI... 42 2.0
13emb|X62932.1|MMXD M.musculus mRNA for xanthine dehydrogenase 42 2.0
14dbj|AK134156.1| Mus musculus adult male thymus cDNA, RIKEN full-... 42 2.0
15dbj|AK144700.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 42 2.0
16dbj|AK160010.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 42 2.0
17gb|BC003997.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA c... 42 2.0
18dbj|AK008517.1| Mus musculus adult male small intestine cDNA, RI... 42 2.0
19dbj|AK090058.1| Mus musculus CRL-2116 JC cDNA, RIKEN full-length... 42 2.0
20gb|BC032077.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA c... 42 2.0
21gb|AF077529.1| Caenorhabditis elegans cosmid C09E8, complete seq... 40 8.1
22gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence 40 8.1
23emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chro... 40 8.1
24emb|AJ007510.1|BCE7510 Bacillus cereus mcrB (partial), t3mod and... 40 8.1
25emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 8.1
26gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 8.1
27emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chro... 40 8.1

>gb|BT009282.1| Triticum aestivum clone wlm0.pk0003.f3:fis, full insert mRNA sequence
          Length = 2335

 Score =  835 bits (421), Expect = 0.0
 Identities = 501/524 (95%), Gaps = 4/524 (0%)
 Strand = Plus / Minus

                                                                        
Query: 70   aggttatttgaagtacagtggtattcgtaatcctatatcaacacttcatctgtactttta 129
            |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2275 aggttatttgaagtat-gtggtattcgtaatcctatatcaacacttcatctgtactttta 2217

                                                                        
Query: 130  tcatgcacacagcgtgtccggactgtacagtatagtgca-ccacataacaggtatacaca 188
            || ||||||||||||||||| ||||||||||||||| || ||||||||||||||  ||||
Sbjct: 2216 tcttgcacacagcgtgtccgtactgtacagtatagtacaaccacataacaggta--caca 2159

                                                                        
Query: 189  tttacgttgcatgtatcggctactctggcagcaaccactatacgctaagcttgggacggt 248
            ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 2158 tttacgttgaatgtatcggctactctggcagtaaccactatacactaagcttgggacggt 2099

                                                                        
Query: 249  aatacacactcgcaaatttcttcgtaatggagtcaacacacgccatccttatcctttcag 308
            ||||||||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 2098 aatacacacacgcaaatttcttcgtaattgagtcaacacacgccattcttattctttcag 2039

                                                                        
Query: 309  gcgttgccgggttgtcgagggggaaccagtcgagatggccctcctccgccctagccgccg 368
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 2038 gcgttgccgggttgtcgagagggaaccagtcgagatgaccctcctccgccctagctgccg 1979

                                                                        
Query: 369  cgatcgcgtcttttatcgcaaacaagacggcggaagcgaggaagaacggtggctctccga 428
            ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1978 cgatcgcgtcttttatcgcaaacaagatggcggaagcgaggaagaacggtggctctccta 1919

                                                                        
Query: 429  cagccttggatgagtgtatggcccttggatttggaacacccttcaatagtgaaaccttga 488
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1918 cagccttggatgagtgtatagcccttggatttggaacacccttcaatagtgaaaccttga 1859

                                                                        
Query: 489  aattgagaggtatatcatttatagagggtattttgtaagagccaggaccacaagtgaaaa 548
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1858 aattgagaggtatatcatttacagagggtattttgtaagagccaggaccacaagtgaaaa 1799

                                                        
Query: 549  ggtgtccaggtcgaatccacttgtggttgtcatccccccatttt 592
            ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1798 ggtatccaggtcgaatccacttgtggttgtcatccccccatttt 1755



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>dbj|AK103000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G02, full
            insert sequence
          Length = 3833

 Score =  349 bits (176), Expect = 7e-93
 Identities = 332/384 (86%)
 Strand = Plus / Minus

                                                                        
Query: 209  tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
            |||| |||||| | ||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 3742 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 3683

                                                                        
Query: 269  ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
            || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| 
Sbjct: 3682 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 3623

                                                                        
Query: 329  gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
            |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 3622 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 3563

                                                                        
Query: 389  aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
            ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 3562 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 3503

                                                                        
Query: 449  gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508
             || |||||||   ||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 3502 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 3443

                                                                        
Query: 509  atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568
            | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 3442 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3383

                                    
Query: 569  ttgtggttgtcatccccccatttt 592
            |||||||| |||||||||||||||
Sbjct: 3382 ttgtggttatcatccccccatttt 3359



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>dbj|AK065099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M21, full
            insert sequence
          Length = 4458

 Score =  349 bits (176), Expect = 7e-93
 Identities = 332/384 (86%)
 Strand = Plus / Minus

                                                                        
Query: 209  tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
            |||| |||||| | |||||||||||||||||||||||||||||| || || ||| |||||
Sbjct: 4136 tactttggcagtagccactatacgctaagcttgggacggtaatatacgctagcagatttc 4077

                                                                        
Query: 269  ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
            || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| 
Sbjct: 4076 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 4017

                                                                        
Query: 329  gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
            |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 4016 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 3957

                                                                        
Query: 389  aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
            ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 3956 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 3897

                                                                        
Query: 449  gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508
             || |||||||   ||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 3896 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 3837

                                                                        
Query: 509  atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568
            | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 3836 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3777

                                    
Query: 569  ttgtggttgtcatccccccatttt 592
            |||||||| |||||||||||||||
Sbjct: 3776 ttgtggttatcatccccccatttt 3753



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>dbj|AK073276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024D24, full
            insert sequence
          Length = 1653

 Score =  341 bits (172), Expect = 2e-90
 Identities = 331/384 (86%)
 Strand = Plus / Minus

                                                                        
Query: 209  tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
            |||| |||||| | ||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 1486 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 1427

                                                                        
Query: 269  ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
            || || ||||| || || || ||||| ||||| ||||| || ||||| ||| |||| || 
Sbjct: 1426 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcaagt 1367

                                                                        
Query: 329  gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
            |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 1366 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 1307

                                                                        
Query: 389  aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
            ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 1306 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 1247

                                                                        
Query: 449  gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508
             || |||||||   ||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 1246 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 1187

                                                                        
Query: 509  atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568
            | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1186 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 1127

                                    
Query: 569  ttgtggttgtcatccccccatttt 592
            |||||||| |||||||||||||||
Sbjct: 1126 ttgtggttatcatccccccatttt 1103



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>dbj|AK067814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116P05, full
            insert sequence
          Length = 4485

 Score =  341 bits (172), Expect = 2e-90
 Identities = 331/384 (86%)
 Strand = Plus / Minus

                                                                        
Query: 209  tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
            |||| |||||| | ||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 4257 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 4198

                                                                        
Query: 269  ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
            || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| 
Sbjct: 4197 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 4138

                                                                        
Query: 329  gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
            |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 4137 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 4078

                                                                        
Query: 389  aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
            ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 4077 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 4018

                                                                        
Query: 449  gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508
             || |||||||   |||  ||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 4017 acctttggattcaaaacgtccttcaaaagtgagaccttgaagtttagaggtatatcattt 3958

                                                                        
Query: 509  atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568
            | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 3957 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3898

                                    
Query: 569  ttgtggttgtcatccccccatttt 592
            |||||||| |||||||||||||||
Sbjct: 3897 ttgtggttatcatccccccatttt 3874



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>gb|AY105293.1| Zea mays PCO121721 mRNA sequence
          Length = 1825

 Score =  311 bits (157), Expect = 1e-81
 Identities = 289/333 (86%)
 Strand = Plus / Minus

                                                                        
Query: 260  gcaaatttcttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccggg 319
            ||||||||||| |||||||| || ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 1499 gcaaatttctttgtaatggaatccacacatgccattcttattctttccggtgtcgccggg 1440

                                                                        
Query: 320  ttgtcgagggggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtct 379
            |||||||| || |||||||| |  || |||||||| ||||| ||||| | |||||| || 
Sbjct: 1439 ttgtcgagtggaaaccagtccaagtgcccctcctcagcccttgccgcagagatcgcatcc 1380

                                                                        
Query: 380  tttatcgcaaacaagacggcggaagcgaggaagaacggtggctctccgacagccttggat 439
            ||||||||||| |||||||||||| | ||||| || ||||||||||| || || ||||| 
Sbjct: 1379 tttatcgcaaataagacggcggaacctaggaaaaatggtggctctcccacggctttggaa 1320

                                                                        
Query: 440  gagtgtatggcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggt 499
            || || || ||| ||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1319 gaatgaatagcctttggatttggaacaccctttaatagagaaaccttgaaattcagaggt 1260

                                                                        
Query: 500  atatcatttatagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggt 559
            |||||||||| |||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1259 atatcatttacagagggtattttgtaagaaccaggaccgcaggtgaagaggtgtccaggt 1200

                                             
Query: 560  cgaatccacttgtggttgtcatccccccatttt 592
            ||||||||||| ||||| |||||||||||||||
Sbjct: 1199 cgaatccacttatggttatcatccccccatttt 1167



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>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete
             sequence
          Length = 115815

 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                         
Query: 468   ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 527
             ||||||| ||||| |||||||| || |||||||||||||||| |||||||||||||||||
Sbjct: 82695 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 82754

                                                                         
Query: 528   agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 587
             ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 82755 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 82814

                  
Query: 588   atttt 592
             |||||
Sbjct: 82815 atttt 82819



 Score =  180 bits (91), Expect = 3e-42
 Identities = 211/251 (84%)
 Strand = Plus / Plus

                                                                         
Query: 209   tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
             |||| |||||| | ||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 81705 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 81764

                                                                         
Query: 269   ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
             || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| 
Sbjct: 81765 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 81824

                                                                         
Query: 329   gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
             |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 81825 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 81884

                                                                         
Query: 389   aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
             ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 81885 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 81944

                        
Query: 449   gcccttggatt 459
              || |||||||
Sbjct: 81945 acctttggatt 81955



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Minus

                                                                            
Query: 468      ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 527
                ||||||| ||||| |||||||| || |||||||||||||||| |||||||||||||||||
Sbjct: 17809420 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 17809361

                                                                            
Query: 528      agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 587
                ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 17809360 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 17809301

                     
Query: 588      atttt 592
                |||||
Sbjct: 17809300 atttt 17809296



 Score =  180 bits (91), Expect = 3e-42
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                            
Query: 209      tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
                |||| |||||| | ||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 17810410 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 17810351

                                                                            
Query: 269      ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
                || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| 
Sbjct: 17810350 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 17810291

                                                                            
Query: 329      gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
                |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 17810290 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 17810231

                                                                            
Query: 389      aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
                ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 17810230 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 17810171

                           
Query: 449      gcccttggatt 459
                 || |||||||
Sbjct: 17810170 acctttggatt 17810160



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Minus

                                                                            
Query: 468      ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 527
                ||||||| ||||| |||||||| || |||||||||||||||| |||||||||||||||||
Sbjct: 17802961 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 17802902

                                                                            
Query: 528      agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 587
                ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 17802901 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 17802842

                     
Query: 588      atttt 592
                |||||
Sbjct: 17802841 atttt 17802837



 Score =  180 bits (91), Expect = 3e-42
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                            
Query: 209      tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268
                |||| |||||| | ||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 17803951 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 17803892

                                                                            
Query: 269      ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328
                || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| 
Sbjct: 17803891 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 17803832

                                                                            
Query: 329      gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388
                |||||||||||||  || |||||||| || || || || |  ||||| || ||||| |||
Sbjct: 17803831 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 17803772

                                                                            
Query: 389      aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448
                ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 17803771 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 17803712

                           
Query: 449      gcccttggatt 459
                 || |||||||
Sbjct: 17803711 acctttggatt 17803701



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>ref|NM_011723.2| Mus musculus xanthine dehydrogenase (Xdh), mRNA
          Length = 4587

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 3851 ggtggctcgccgacagccttggatg 3827



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>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete
             sequence
          Length = 208462

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 470   ttcaatagtgaaaccttgaaa 490
             |||||||||||||||||||||
Sbjct: 41754 ttcaatagtgaaaccttgaaa 41774



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>gb|BC065699.1| Mus musculus cDNA clone IMAGE:4009388, **** WARNING: chimeric clone
            ****
          Length = 3748

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 3002 ggtggctcgccgacagccttggatg 2978



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>emb|X62932.1|MMXD M.musculus mRNA for xanthine dehydrogenase
          Length = 4538

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 3799 ggtggctcgccgacagccttggatg 3775



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>dbj|AK134156.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830460G01 product:xanthine dehydrogenase,
            full insert sequence
          Length = 3096

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 2351 ggtggctcgccgacagccttggatg 2327



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>dbj|AK144700.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730024I24 product:xanthine dehydrogenase,
            full insert sequence
          Length = 4553

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 3817 ggtggctcgccgacagccttggatg 3793



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>dbj|AK160010.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420044B05 product:xanthine dehydrogenase,
            full insert sequence
          Length = 4304

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 3564 ggtggctcgccgacagccttggatg 3540



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>gb|BC003997.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA clone
           IMAGE:3492290), partial cds
          Length = 1124

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 416 ggtggctctccgacagccttggatg 440
           |||||||| ||||||||||||||||
Sbjct: 337 ggtggctcgccgacagccttggatg 313



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>dbj|AK008517.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010303G08 product:xanthine
           dehydrogenase, full insert sequence
          Length = 1327

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 416 ggtggctctccgacagccttggatg 440
           |||||||| ||||||||||||||||
Sbjct: 782 ggtggctcgccgacagccttggatg 758



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>dbj|AK090058.1| Mus musculus CRL-2116 JC cDNA, RIKEN full-length enriched library,
            clone:G430085P04 product:xanthine dehydrogenase, full
            insert sequence
          Length = 3747

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 3008 ggtggctcgccgacagccttggatg 2984



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>gb|BC032077.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA clone IMAGE:3583596)
          Length = 2824

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 416  ggtggctctccgacagccttggatg 440
            |||||||| ||||||||||||||||
Sbjct: 2070 ggtggctcgccgacagccttggatg 2046



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>gb|AF077529.1| Caenorhabditis elegans cosmid C09E8, complete sequence
          Length = 21615

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ccaaattttgaactaattgt 54
            ||||||||||||||||||||
Sbjct: 8687 ccaaattttgaactaattgt 8668



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>gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence
          Length = 221526

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    gcccttggatttggaacacc 468
              ||||||||||||||||||||
Sbjct: 111483 gcccttggatttggaacacc 111502



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>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3'
              end of the COL4A2 gene for collagen type IV alpha 2, the
              RAB20 gene for a RAS oncogene family member, a novel gene
              (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene
              (FLJ12118) and three CpG islands, complete sequence
          Length = 177392

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     atttgaagtacagtggtatt 94
              ||||||||||||||||||||
Sbjct: 101955 atttgaagtacagtggtatt 101974



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>emb|AJ007510.1|BCE7510 Bacillus cereus mcrB (partial), t3mod and t3res genes, and 210b, 210e
            and 210f
          Length = 10915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   ttgaactaattgtttttgct 61
            ||||||||||||||||||||
Sbjct: 9989 ttgaactaattgtttttgct 9970



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 314     gccgggttgtcgagggggaa 333
               ||||||||||||||||||||
Sbjct: 3143781 gccgggttgtcgagggggaa 3143800



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 42      ttgaactaattgtttttgct 61
               ||||||||||||||||||||
Sbjct: 1054484 ttgaactaattgtttttgct 1054465



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>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete
              sequence
          Length = 200375

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    gcccttggatttggaacacc 468
              ||||||||||||||||||||
Sbjct: 168945 gcccttggatttggaacacc 168964


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,262,221
Number of Sequences: 3902068
Number of extensions: 4262221
Number of successful extensions: 107332
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107151
Number of HSP's gapped (non-prelim): 170
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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