| Clone Name | rbaal29d20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009282.1| Triticum aestivum clone wlm0.pk0003.f3:fis, full insert mRNA sequence Length = 2335 Score = 835 bits (421), Expect = 0.0 Identities = 501/524 (95%), Gaps = 4/524 (0%) Strand = Plus / Minus Query: 70 aggttatttgaagtacagtggtattcgtaatcctatatcaacacttcatctgtactttta 129 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2275 aggttatttgaagtat-gtggtattcgtaatcctatatcaacacttcatctgtactttta 2217 Query: 130 tcatgcacacagcgtgtccggactgtacagtatagtgca-ccacataacaggtatacaca 188 || ||||||||||||||||| ||||||||||||||| || |||||||||||||| |||| Sbjct: 2216 tcttgcacacagcgtgtccgtactgtacagtatagtacaaccacataacaggta--caca 2159 Query: 189 tttacgttgcatgtatcggctactctggcagcaaccactatacgctaagcttgggacggt 248 ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 2158 tttacgttgaatgtatcggctactctggcagtaaccactatacactaagcttgggacggt 2099 Query: 249 aatacacactcgcaaatttcttcgtaatggagtcaacacacgccatccttatcctttcag 308 ||||||||| |||||||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 2098 aatacacacacgcaaatttcttcgtaattgagtcaacacacgccattcttattctttcag 2039 Query: 309 gcgttgccgggttgtcgagggggaaccagtcgagatggccctcctccgccctagccgccg 368 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2038 gcgttgccgggttgtcgagagggaaccagtcgagatgaccctcctccgccctagctgccg 1979 Query: 369 cgatcgcgtcttttatcgcaaacaagacggcggaagcgaggaagaacggtggctctccga 428 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 1978 cgatcgcgtcttttatcgcaaacaagatggcggaagcgaggaagaacggtggctctccta 1919 Query: 429 cagccttggatgagtgtatggcccttggatttggaacacccttcaatagtgaaaccttga 488 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 cagccttggatgagtgtatagcccttggatttggaacacccttcaatagtgaaaccttga 1859 Query: 489 aattgagaggtatatcatttatagagggtattttgtaagagccaggaccacaagtgaaaa 548 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1858 aattgagaggtatatcatttacagagggtattttgtaagagccaggaccacaagtgaaaa 1799 Query: 549 ggtgtccaggtcgaatccacttgtggttgtcatccccccatttt 592 ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1798 ggtatccaggtcgaatccacttgtggttgtcatccccccatttt 1755
>dbj|AK103000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G02, full insert sequence Length = 3833 Score = 349 bits (176), Expect = 7e-93 Identities = 332/384 (86%) Strand = Plus / Minus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 3742 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 3683 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 3682 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 3623 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 3622 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 3563 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 3562 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 3503 Query: 449 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508 || ||||||| ||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 3502 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 3443 Query: 509 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3442 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3383 Query: 569 ttgtggttgtcatccccccatttt 592 |||||||| ||||||||||||||| Sbjct: 3382 ttgtggttatcatccccccatttt 3359
>dbj|AK065099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M21, full insert sequence Length = 4458 Score = 349 bits (176), Expect = 7e-93 Identities = 332/384 (86%) Strand = Plus / Minus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | |||||||||||||||||||||||||||||| || || ||| ||||| Sbjct: 4136 tactttggcagtagccactatacgctaagcttgggacggtaatatacgctagcagatttc 4077 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 4076 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 4017 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 4016 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 3957 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 3956 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 3897 Query: 449 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508 || ||||||| ||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 3896 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 3837 Query: 509 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3836 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3777 Query: 569 ttgtggttgtcatccccccatttt 592 |||||||| ||||||||||||||| Sbjct: 3776 ttgtggttatcatccccccatttt 3753
>dbj|AK073276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024D24, full insert sequence Length = 1653 Score = 341 bits (172), Expect = 2e-90 Identities = 331/384 (86%) Strand = Plus / Minus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 1486 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 1427 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| |||| || Sbjct: 1426 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcaagt 1367 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 1366 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 1307 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1306 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 1247 Query: 449 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508 || ||||||| ||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1246 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 1187 Query: 509 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 1186 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 1127 Query: 569 ttgtggttgtcatccccccatttt 592 |||||||| ||||||||||||||| Sbjct: 1126 ttgtggttatcatccccccatttt 1103
>dbj|AK067814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116P05, full insert sequence Length = 4485 Score = 341 bits (172), Expect = 2e-90 Identities = 331/384 (86%) Strand = Plus / Minus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 4257 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 4198 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 4197 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 4138 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 4137 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 4078 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 4077 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 4018 Query: 449 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 508 || ||||||| ||| ||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 4017 acctttggattcaaaacgtccttcaaaagtgagaccttgaagtttagaggtatatcattt 3958 Query: 509 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 568 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3957 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3898 Query: 569 ttgtggttgtcatccccccatttt 592 |||||||| ||||||||||||||| Sbjct: 3897 ttgtggttatcatccccccatttt 3874
>gb|AY105293.1| Zea mays PCO121721 mRNA sequence Length = 1825 Score = 311 bits (157), Expect = 1e-81 Identities = 289/333 (86%) Strand = Plus / Minus Query: 260 gcaaatttcttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccggg 319 ||||||||||| |||||||| || ||||| ||||| ||||| ||||| || || |||||| Sbjct: 1499 gcaaatttctttgtaatggaatccacacatgccattcttattctttccggtgtcgccggg 1440 Query: 320 ttgtcgagggggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtct 379 |||||||| || |||||||| | || |||||||| ||||| ||||| | |||||| || Sbjct: 1439 ttgtcgagtggaaaccagtccaagtgcccctcctcagcccttgccgcagagatcgcatcc 1380 Query: 380 tttatcgcaaacaagacggcggaagcgaggaagaacggtggctctccgacagccttggat 439 ||||||||||| |||||||||||| | ||||| || ||||||||||| || || ||||| Sbjct: 1379 tttatcgcaaataagacggcggaacctaggaaaaatggtggctctcccacggctttggaa 1320 Query: 440 gagtgtatggcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggt 499 || || || ||| ||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1319 gaatgaatagcctttggatttggaacaccctttaatagagaaaccttgaaattcagaggt 1260 Query: 500 atatcatttatagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggt 559 |||||||||| |||||||||||||||||| |||||||| || ||||| |||||||||||| Sbjct: 1259 atatcatttacagagggtattttgtaagaaccaggaccgcaggtgaagaggtgtccaggt 1200 Query: 560 cgaatccacttgtggttgtcatccccccatttt 592 ||||||||||| ||||| ||||||||||||||| Sbjct: 1199 cgaatccacttatggttatcatccccccatttt 1167
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 184 bits (93), Expect = 2e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 468 ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 527 ||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||| Sbjct: 82695 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 82754 Query: 528 agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 587 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 82755 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 82814 Query: 588 atttt 592 ||||| Sbjct: 82815 atttt 82819 Score = 180 bits (91), Expect = 3e-42 Identities = 211/251 (84%) Strand = Plus / Plus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 81705 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 81764 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 81765 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 81824 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 81825 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 81884 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 81885 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 81944 Query: 449 gcccttggatt 459 || ||||||| Sbjct: 81945 acctttggatt 81955
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 184 bits (93), Expect = 2e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 468 ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 527 ||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||| Sbjct: 17809420 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 17809361 Query: 528 agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 587 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 17809360 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 17809301 Query: 588 atttt 592 ||||| Sbjct: 17809300 atttt 17809296 Score = 180 bits (91), Expect = 3e-42 Identities = 211/251 (84%) Strand = Plus / Minus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 17810410 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 17810351 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 17810350 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 17810291 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 17810290 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 17810231 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 17810230 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 17810171 Query: 449 gcccttggatt 459 || ||||||| Sbjct: 17810170 acctttggatt 17810160
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 184 bits (93), Expect = 2e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 468 ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 527 ||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||| Sbjct: 17802961 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 17802902 Query: 528 agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 587 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 17802901 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 17802842 Query: 588 atttt 592 ||||| Sbjct: 17802841 atttt 17802837 Score = 180 bits (91), Expect = 3e-42 Identities = 211/251 (84%) Strand = Plus / Minus Query: 209 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 268 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 17803951 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 17803892 Query: 269 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 328 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 17803891 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 17803832 Query: 329 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 388 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 17803831 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 17803772 Query: 389 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 448 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 17803771 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 17803712 Query: 449 gcccttggatt 459 || ||||||| Sbjct: 17803711 acctttggatt 17803701
>ref|NM_011723.2| Mus musculus xanthine dehydrogenase (Xdh), mRNA Length = 4587 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 3851 ggtggctcgccgacagccttggatg 3827
>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence Length = 208462 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 ttcaatagtgaaaccttgaaa 490 ||||||||||||||||||||| Sbjct: 41754 ttcaatagtgaaaccttgaaa 41774
>gb|BC065699.1| Mus musculus cDNA clone IMAGE:4009388, **** WARNING: chimeric clone **** Length = 3748 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 3002 ggtggctcgccgacagccttggatg 2978
>emb|X62932.1|MMXD M.musculus mRNA for xanthine dehydrogenase Length = 4538 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 3799 ggtggctcgccgacagccttggatg 3775
>dbj|AK134156.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830460G01 product:xanthine dehydrogenase, full insert sequence Length = 3096 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 2351 ggtggctcgccgacagccttggatg 2327
>dbj|AK144700.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730024I24 product:xanthine dehydrogenase, full insert sequence Length = 4553 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 3817 ggtggctcgccgacagccttggatg 3793
>dbj|AK160010.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420044B05 product:xanthine dehydrogenase, full insert sequence Length = 4304 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 3564 ggtggctcgccgacagccttggatg 3540
>gb|BC003997.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA clone IMAGE:3492290), partial cds Length = 1124 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 337 ggtggctcgccgacagccttggatg 313
>dbj|AK008517.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010303G08 product:xanthine dehydrogenase, full insert sequence Length = 1327 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 782 ggtggctcgccgacagccttggatg 758
>dbj|AK090058.1| Mus musculus CRL-2116 JC cDNA, RIKEN full-length enriched library, clone:G430085P04 product:xanthine dehydrogenase, full insert sequence Length = 3747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 3008 ggtggctcgccgacagccttggatg 2984
>gb|BC032077.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA clone IMAGE:3583596) Length = 2824 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtggctctccgacagccttggatg 440 |||||||| |||||||||||||||| Sbjct: 2070 ggtggctcgccgacagccttggatg 2046
>gb|AF077529.1| Caenorhabditis elegans cosmid C09E8, complete sequence Length = 21615 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ccaaattttgaactaattgt 54 |||||||||||||||||||| Sbjct: 8687 ccaaattttgaactaattgt 8668
>gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence Length = 221526 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 gcccttggatttggaacacc 468 |||||||||||||||||||| Sbjct: 111483 gcccttggatttggaacacc 111502
>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3' end of the COL4A2 gene for collagen type IV alpha 2, the RAB20 gene for a RAS oncogene family member, a novel gene (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene (FLJ12118) and three CpG islands, complete sequence Length = 177392 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 atttgaagtacagtggtatt 94 |||||||||||||||||||| Sbjct: 101955 atttgaagtacagtggtatt 101974
>emb|AJ007510.1|BCE7510 Bacillus cereus mcrB (partial), t3mod and t3res genes, and 210b, 210e and 210f Length = 10915 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ttgaactaattgtttttgct 61 |||||||||||||||||||| Sbjct: 9989 ttgaactaattgtttttgct 9970
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gccgggttgtcgagggggaa 333 |||||||||||||||||||| Sbjct: 3143781 gccgggttgtcgagggggaa 3143800
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ttgaactaattgtttttgct 61 |||||||||||||||||||| Sbjct: 1054484 ttgaactaattgtttttgct 1054465
>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete sequence Length = 200375 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 gcccttggatttggaacacc 468 |||||||||||||||||||| Sbjct: 168945 gcccttggatttggaacacc 168964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,262,221 Number of Sequences: 3902068 Number of extensions: 4262221 Number of successful extensions: 107332 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107151 Number of HSP's gapped (non-prelim): 170 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)