>ERBB2_CANFA (O18735) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2)
          Length = 1259

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 192 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 76
           S C+ A L F+H+G C L C A+V + T    + P P G
Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMPNPEG 287

>ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
          Length = 1254

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 192 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 76
           S C+ A L F+H+G C L C A+V + T    + P P G
Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMPNPEG 287

>ERBB2_HUMAN (P04626) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
           (Tyrosine kinase-type cell surface receptor HER2) (MLN
           19)
          Length = 1255

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 192 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 76
           S C+ A L F+H+G C L C A+V + T    + P P G
Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMPNPEG 287

>ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
           (Epidermal growth factor receptor-related protein)
          Length = 1257

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 192 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 76
           S C+ A L F+H+G C L C A+V + T    +   P G
Sbjct: 251 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMHNPEG 288

>ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
          Length = 1256

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 192 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 76
           S C+ A L F+H+G C L C A++ + T    +   P G
Sbjct: 251 SDCL-ACLHFNHSGICELHCPALITYNTDTFESMLNPEG 288

>HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 690

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 216 PKSICATSSSCVFAALSFHHAGFCN 142
           P S C   + C+ A ++FHHAG  N
Sbjct: 278 PTSTCLKLAECLEAGIAFHHAGLFN 302

>LGT_LEGPL (Q5WSU4) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 256

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 197 PRHRASLLHYPFIMLASAILVVGQS*CTAHAPRRQPQVRTVYLVGYVV 54
           PRH + L  +    +A  IL+     C A  PR+Q +V  ++L+GY +
Sbjct: 168 PRHPSQLYEFGLEGVALFILIW----CYASKPRQQGRVSALFLMGYAI 211

>LGT_LEGPH (Q5ZRL2) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 256

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 197 PRHRASLLHYPFIMLASAILVVGQS*CTAHAPRRQPQVRTVYLVGYVV 54
           PRH + L  +    +A  IL+     C A  PR+Q +V  ++L+GY +
Sbjct: 168 PRHPSQLYEFGLEGVALFILIW----CYASKPRQQGRVSALFLMGYAI 211

>LGT_LEGPA (Q5X118) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 256

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 197 PRHRASLLHYPFIMLASAILVVGQS*CTAHAPRRQPQVRTVYLVGYVV 54
           PRH + L  +    +A  IL+     C A  PR+Q +V  ++L+GY +
Sbjct: 168 PRHPSQLYEFGLEGVALFILIW----CYASKPRQQGRVCALFLMGYAI 211

>ZCHC9_MOUSE (Q8R1J3) Zinc finger CCHC domain-containing protein 9|
          Length = 273

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +3

Query: 72  VDRSDLGLPPRRVCRASRLP 131
           V+R+D  LP R+ C++SRLP
Sbjct: 29  VERADQSLPNRKQCQSSRLP 48

>SCYB5_RAT (P97885) Small inducible cytokine B5 precursor (CXCL5) (Cytokine|
           LIX)
          Length = 130

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 50  LTQHSQQGRPFGPGAAAEARVPCITIAQQL 139
           L QH  Q  PF    A E R  C+T+A ++
Sbjct: 30  LPQHRAQAAPFSAMVATELRCVCLTLAPRI 59

>HELS_METJA (Q58524) Putative ski2-type helicase (EC 3.6.1.-) [Contains:|
           Endonuclease PI-MjaHel (EC 3.1.-.-) (Mja Hel intein)
           (Mja Pep3 intein)]
          Length = 1195

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 216 PKSICATSSSCVFAALSFHHAG 151
           P  +C T + C+    +FHHAG
Sbjct: 289 PTEMCKTLAECILNGSAFHHAG 310


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,220,431
Number of Sequences: 219361
Number of extensions: 599110
Number of successful extensions: 1610
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)