ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal29d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 541 e-150
2gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 349 7e-93
3gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotrans... 172 1e-39
4gb|AY089999.1| Lolium perenne CACTA-family transposon sequence 168 2e-38
5gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 131 3e-27
6gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, co... 46 0.15
7gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, com... 46 0.15
8emb|AL356497.3| Human DNA sequence from clone RP4-578N1 on chrom... 46 0.15
9ref|XM_614538.2| PREDICTED: Bos taurus similar to DDM36 (LOC5410... 44 0.59
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
11dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
12dbj|AK059873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
13ref|XM_635214.1| Dictyostelium discoideum actin binding protein ... 42 2.3
14gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
15gb|AC162934.6| Mus musculus BAC clone RP23-131P21 from chromosom... 42 2.3
16gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome... 42 2.3
17emb|AJ812734.1| Dictyostelium discoideum mRNA for diaphanous-rel... 42 2.3
18dbj|AB201131.1| Termitomyces sp. Group5 lccKU418-20 mRNA for put... 42 2.3
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
20gb|AC025420.26| Homo sapiens 12 BAC RP11-491C17 (Roswell Park Ca... 42 2.3
21gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete... 42 2.3
22dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
23dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
24gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q2... 40 9.3
25gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Canc... 40 9.3
26emb|BX927312.7| Zebrafish DNA sequence from clone CH211-87G12 in... 40 9.3
27gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 9.3
28emb|AL691455.20| Human DNA sequence from clone CTD-2411I11 on ch... 40 9.3
29emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15... 40 9.3
30gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, co... 40 9.3
31gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete se... 40 9.3
32gb|AC093278.2| Homo sapiens chromosome 5 clone RP11-389C8, compl... 40 9.3
33gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Can... 40 9.3
34gb|AC027139.5|AC027139 Homo sapiens, clone RP11-1H8, complete se... 40 9.3
35gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, r... 40 9.3
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
37gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, comp... 40 9.3
38dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
39gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Can... 40 9.3
40gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 ma... 40 9.3
41dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.3
42gb|AF061186.1|AF061186 Phytophthora infestans cyst germination s... 40 9.3
43gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 9.3
44emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-9... 40 9.3
45dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 9.3
46emb|AL845299.13| Mouse DNA sequence from clone RP23-375N8 on chr... 40 9.3
47emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chro... 40 9.3
48dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.3 
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score =  541 bits (273), Expect = e-150
 Identities = 390/428 (91%), Gaps = 12/428 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      catattagtctccgaattcaaaataccgaacaaagttagaacattacaagtctcgagacc 60
              |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 323464 catattagtctccgaatttaaaataccgaacaaagttagaacattacaagtctcgaaacc 323405

                                                                          
Query: 61     gcgagtagcgagtttgtcttcacattacaattcgatatc-------taaactaccatcac 113
              |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||
Sbjct: 323404 gcgagtagcgagtttgtcttcacattacaagtcgatatcgatcatctaaactaccatcac 323345

                                                                          
Query: 114    atagaagagggttgcggtca---cgatgagcatcatcgtgatgaaactgatcttcatccg 170
              ||||||||| || |||||||   ||||||||||||||| |||||||||| ||||||||| 
Sbjct: 323344 atagaagagagtcgcggtcatcacgatgagcatcatcgcgatgaaactggtcttcatcca 323285

                                                                          
Query: 171    gttcctcctccgctcccacctctctctcccactagatagcgcgcgtatctagcttccgcc 230
              ||| ||||||||||||| ||||||||  || |||||||||||||||||||| ||||||||
Sbjct: 323284 gtttctcctccgctccctcctctctc--ccgctagatagcgcgcgtatctaacttccgcc 323227

                                                                          
Query: 231    tccgccctagtggtgtaccctttgtaactattaccgctgaaacggtgaacctgtctccga 290
              ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 323226 tccgccctagtggtgtaccctttgtaactgttaccgctgaaacggtgaacctatctccga 323167

                                                                          
Query: 291    cactcctcccagtcgtcgtagacttcgggaacctcacccttgtacacgacatacgacgac 350
              ||||||||||||||||||||| || ||||||||| |||||| |||||||||||||||| |
Sbjct: 323166 cactcctcccagtcgtcgtagtctccgggaaccttacccttatacacgacatacgacggc 323107

                                                                          
Query: 351    atctctatgcactagacaaaccaaacattagtagcaattcgcagataatatataagcaat 410
              ||||||||||||||| ||||| |||| |||||| |||||| |||| |||| |||||||||
Sbjct: 323106 atctctatgcactagccaaacaaaacgttagtaacaattcacagacaatacataagcaat 323047

                      
Query: 411    atataagt 418
              ||||||||
Sbjct: 323046 atataagt 323039
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score =  349 bits (176), Expect = 7e-93
 Identities = 369/433 (85%), Gaps = 24/433 (5%)
 Strand = Plus / Plus

                                                                          
Query: 1      catattagtctccgaattcaaaataccgaacaaagttagaacatta-----caagtctcg 55
              |||||||||||||||||| |||| ||||||||||| ||||||||||     |||||||||
Sbjct: 101071 catattagtctccgaattgaaaagaccgaacaaagatagaacattatattacaagtctcg 101130

                                                                          
Query: 56     agaccgcgagtagcgagtttgtcttcacattacaattcgatatc-------taaactacc 108
              |||||||||||       ||||||||||||||||| ||||||||       ||||||| |
Sbjct: 101131 agaccgcgagt-------ttgtcttcacattacaagtcgatatcgatcatctaaactatc 101183

                                                                          
Query: 109    atcacatagaagagggttgcggtca---cgatgagcatcatcgtgatgaaactgatcttc 165
              |||||||||||||| | ||||||||   ||||||||||||||  |||||||||  |||||
Sbjct: 101184 atcacatagaagagagctgcggtcatcacgatgagcatcatcacgatgaaactcgtcttc 101243

                                                                          
Query: 166    atccggttcctcctccgctcccacctctctctcccactagatagcgcgcgtatctagctt 225
              |||||||||||||   |||||| |  | ||||||| |||||||| | |||||||||| ||
Sbjct: 101244 atccggttcctccaatgctccctc--ccctctcccgctagatagtgggcgtatctagatt 101301

                                                                          
Query: 226    ccgcctccgccctagtggtgtaccctttgtaactattaccgctgaaacggtgaacctgtc 285
              | ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 101302 cggcctcggccctagtggtgtaccatttgtaactattaccgctgaatcggtgaacctgtc 101361

                                                                          
Query: 286    tccgacactcctcccagtcgtcgtagacttcgggaacctcacccttgtacacgacatacg 345
              ||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||| 
Sbjct: 101362 tccgacactcctcccagtcgttgtagaatccgggaaccttacccttgtacacgacatacc 101421

                                                                          
Query: 346    acgacatctctatgcactagacaaaccaaacattagtagcaattcgcagataatatataa 405
              ||| |||| ||||||| ||| ||||| |||| |||||| |||||| |||| |||| ||||
Sbjct: 101422 acggcatcgctatgcagtagccaaacgaaacgttagtaccaattcacagacaatacataa 101481

                           
Query: 406    gcaatatataagt 418
              |||| ||||||||
Sbjct: 101482 gcaacatataagt 101494
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>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score =  172 bits (87), Expect = 1e-39
 Identities = 96/99 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    catattagtctccgaattcaaaataccgaacaaagttagaacattacaagtctcgagacc 60
            |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 catattagtctctgaatttaaaataccgaacaaagttagaacattacaagtctcgagacc 2000

                                                   
Query: 61   gcgagtagcgagtttgtcttcacattacaattcgatatc 99
            |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1999 gcgagtagcgagtttgtcttcacattacaagtcgatatc 1961



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 216  tatctagcttccgcctccgccctagtggtgtaccctttgta 256
            |||||| ||||||||||| |||| |||||||||||||||||
Sbjct: 1927 tatctaacttccgcctcctcccttgtggtgtaccctttgta 1887
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>gb|AY089999.1| Lolium perenne CACTA-family transposon sequence
          Length = 12483

 Score =  168 bits (85), Expect = 2e-38
 Identities = 208/248 (83%), Gaps = 2/248 (0%)
 Strand = Plus / Minus

                                                                         
Query: 97    atctaaactaccatcacatagaagagggttgcggtcacgatgagcatcatcgtgatgaaa 156
             |||| ||||||||||||||||||||| |||   ||||| |  |||| | ||  |||||||
Sbjct: 11774 atctgaactaccatcacatagaagagagttagagtcactactagcaccgtcccgatgaaa 11715

                                                                         
Query: 157   ctgatcttcatccggttcctcctccgctcccacctctctctcccactagatagcgcgcgt 216
              || |||||||| |||||||||||||||||  |||||||   || | | || ||| ||||
Sbjct: 11714 gtggtcttcatctggttcctcctccgctccgtcctctcta--ccgccacatggcgtgcgt 11657

                                                                         
Query: 217   atctagcttccgcctccgccctagtggtgtaccctttgtaactattaccgctgaaacggt 276
             ||||  |||| | |||||| |||||||||||||||||||| || ||||| || |||||||
Sbjct: 11656 atctgtcttcggtctccgctctagtggtgtaccctttgtagctgttaccactaaaacggt 11597

                                                                         
Query: 277   gaacctgtctccgacactcctcccagtcgtcgtagacttcgggaacctcacccttgtaca 336
             |||||| ||||||||||||||||||||||| ||||||| |||||||||  | ||||||||
Sbjct: 11596 gaacctatctccgacactcctcccagtcgttgtagactccgggaaccttgcacttgtaca 11537

                     
Query: 337   cgacatac 344
             ||||||||
Sbjct: 11536 cgacatac 11529
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>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score =  131 bits (66), Expect = 3e-27
 Identities = 75/78 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     catattagtctccgaattcaaaataccgaacaaagttagaacattacaagtctcgagacc 60
             |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 15795 catattagtctccgaaatcaaaagaccgaacaaagatagaacattacaagtctcgagacc 15736

                               
Query: 61    gcgagtagcgagtttgtc 78
             ||||||||||||||||||
Sbjct: 15735 gcgagtagcgagtttgtc 15718
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>gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, complete sequence
          Length = 160686

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 421    acattggaggtcattatatcttc 443
              |||||||||||||||||||||||
Sbjct: 128322 acattggaggtcattatatcttc 128300
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>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence
          Length = 172865

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 421    acattggaggtcattatatcttc 443
              |||||||||||||||||||||||
Sbjct: 112104 acattggaggtcattatatcttc 112082
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>emb|AL356497.3| Human DNA sequence from clone RP4-578N1 on chromosome 11 Contains an
             STS and GSSs, complete sequence
          Length = 46344

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 421   acattggaggtcattatatcttc 443
             |||||||||||||||||||||||
Sbjct: 41307 acattggaggtcattatatcttc 41285
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>ref|XM_614538.2| PREDICTED: Bos taurus similar to DDM36 (LOC541098), mRNA
          Length = 3717

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 173  tcctcctccgctcccacctctc 194
            ||||||||||||||||||||||
Sbjct: 1976 tcctcctccgctcccacctctc 1955
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 417      gttgacattggaggtcattatatcttcatctacaccagcctg 458
                |||||||| ||  ||||| |||||||||||||| ||||||||
Sbjct: 15180208 gttgacatcggcagtcataatatcttcatctactccagcctg 15180167
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>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1740_D06
          Length = 187410

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 417   gttgacattggaggtcattatatcttcatctacaccagcctg 458
             |||||||| ||  ||||| |||||||||||||| ||||||||
Sbjct: 74184 gttgacatcggcagtcataatatcttcatctactccagcctg 74143
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>dbj|AK059873.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F04, full
           insert sequence
          Length = 1234

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 417 gttgacattggaggtcattatatcttcatctacaccagcctg 458
           |||||||| ||  ||||| |||||||||||||| ||||||||
Sbjct: 764 gttgacatcggcagtcataatatcttcatctactccagcctg 723
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>ref|XM_635214.1| Dictyostelium discoideum actin binding protein (DDB0231188), partial
            mRNA
          Length = 3645

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 93   cgatatctaaactaccatcac 113
            |||||||||||||||||||||
Sbjct: 1192 cgatatctaaactaccatcac 1172
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>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
              complete sequence
          Length = 204649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 165    catccggttcctcctccgctcccac 189
              |||||| ||||||||||||||||||
Sbjct: 140978 catccgtttcctcctccgctcccac 140954
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>gb|AC162934.6| Mus musculus BAC clone RP23-131P21 from chromosome 13, complete
             sequence
          Length = 223665

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 574   tcattgattcccagagtggat 594
             |||||||||||||||||||||
Sbjct: 75744 tcattgattcccagagtggat 75764
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>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence
          Length = 241514

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 574   tcattgattcccagagtggat 594
             |||||||||||||||||||||
Sbjct: 85891 tcattgattcccagagtggat 85871
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>emb|AJ812734.1| Dictyostelium discoideum mRNA for diaphanous-related formin dDia4
            (drf4 gene)
          Length = 3645

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 93   cgatatctaaactaccatcac 113
            |||||||||||||||||||||
Sbjct: 1192 cgatatctaaactaccatcac 1172
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>dbj|AB201131.1| Termitomyces sp. Group5 lccKU418-20 mRNA for putative laccase,
           partial cds, strain: KU418
          Length = 861

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 150 gatgaaactgatcttcatccg 170
           |||||||||||||||||||||
Sbjct: 586 gatgaaactgatcttcatccg 606
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 165      catccggttcctcctccgctcccac 189
                |||||| ||||||||||||||||||
Sbjct: 28060813 catccgtttcctcctccgctcccac 28060789
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>gb|AC025420.26| Homo sapiens 12 BAC RP11-491C17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 94145

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 633   cttgctctgaatcatctttggcaaa 657
             ||||||||||||||| |||||||||
Sbjct: 62995 cttgctctgaatcatgtttggcaaa 62971
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>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    agtttgtcttcacattacaat 91
             |||||||||||||||||||||
Sbjct: 71889 agtttgtcttcacattacaat 71869
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>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full
           insert sequence
          Length = 2378

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 165 catccggttcctcctccgctcccac 189
           |||||| ||||||||||||||||||
Sbjct: 97  catccgtttcctcctccgctcccac 121
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>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full
           insert sequence
          Length = 2356

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 165 catccggttcctcctccgctcccac 189
           |||||| ||||||||||||||||||
Sbjct: 98  catccgtttcctcctccgctcccac 122
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>gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q24.22, complete
             sequence
          Length = 128891

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ctcccacctctctctcccac 202
             ||||||||||||||||||||
Sbjct: 49400 ctcccacctctctctcccac 49381
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>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217046

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 172   ttcctcctccgctcccacctctctctcc 199
             |||||||||| ||||| |||||||||||
Sbjct: 78736 ttcctcctcccctcccccctctctctcc 78709
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>emb|BX927312.7| Zebrafish DNA sequence from clone CH211-87G12 in linkage group 12,
             complete sequence
          Length = 124706

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   agataatatataagcaatat 412
             ||||||||||||||||||||
Sbjct: 82905 agataatatataagcaatat 82886
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    taatatataagcaatatata 415
              ||||||||||||||||||||
Sbjct: 738461 taatatataagcaatatata 738442
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>emb|AL691455.20| Human DNA sequence from clone CTD-2411I11 on chromosome 10 Contains two
             CpG islands, complete sequence
          Length = 41452

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   ctcccacctctctctcccac 202
             ||||||||||||||||||||
Sbjct: 23677 ctcccacctctctctcccac 23696
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>emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15 on chromosome Xq23 Contains
             the NXT2 gene for nuclear transport factor 2-like export
             factor 2 and the GUCY2F gene for guanylate cyclase 2F,
             retinal, complete sequence
          Length = 178863

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   tcctcctccgctcccacctc 192
             ||||||||||||||||||||
Sbjct: 55740 tcctcctccgctcccacctc 55759
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>gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, complete sequence
          Length = 189533

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    cctccgctcccacctctctctccc 200
              |||| |||||||||||||||||||
Sbjct: 140651 cctctgctcccacctctctctccc 140674
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>gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete sequence
          Length = 162691

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 172    ttcctcctccgctcccacctctctctcc 199
              |||||||||| ||||| |||||||||||
Sbjct: 152081 ttcctcctcccctcccccctctctctcc 152108
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>gb|AC093278.2| Homo sapiens chromosome 5 clone RP11-389C8, complete sequence
          Length = 171858

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    atctctatgcactagacaaa 370
              ||||||||||||||||||||
Sbjct: 161437 atctctatgcactagacaaa 161456
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>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202745

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    tcccacctctctctcccact 203
              ||||||||||||||||||||
Sbjct: 202547 tcccacctctctctcccact 202528
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>gb|AC027139.5|AC027139 Homo sapiens, clone RP11-1H8, complete sequence
          Length = 151498

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    cctccgctcccacctctctctccc 200
              |||| |||||||||||||||||||
Sbjct: 116317 cctctgctcccacctctctctccc 116340
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>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
             BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 395   ataatatataagcaatatataagt 418
             |||||||||||| |||||||||||
Sbjct: 73489 ataatatataagtaatatataagt 73512
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     atatataagcaatatataag 417
               ||||||||||||||||||||
Sbjct: 6557324 atatataagcaatatataag 6557305
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>gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, complete sequence
          Length = 152309

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ctcccacctctctctcccac 202
             ||||||||||||||||||||
Sbjct: 67952 ctcccacctctctctcccac 67933
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   atatataagcaatatataag 417
             ||||||||||||||||||||
Sbjct: 73700 atatataagcaatatataag 73681
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>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    tcccacctctctctcccact 203
              ||||||||||||||||||||
Sbjct: 166598 tcccacctctctctcccact 166617
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>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence
          Length = 214840

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 172    ttcctcctccgctcccacctctctctcc 199
              |||||||||| ||||| |||||||||||
Sbjct: 160478 ttcctcctcccctcccccctctctctcc 160451
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>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   atatataagcaatatataag 417
             ||||||||||||||||||||
Sbjct: 70851 atatataagcaatatataag 70832
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>gb|AF061186.1|AF061186 Phytophthora infestans cyst germination specific acidic repeat
           protein pseudogene, complete sequence; and cyst
           germination specific acidic repeat protein precursor
           (car59) gene, partial cds
          Length = 7049

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  tttgtcttcacattacaattcgat 96
           ||||||||||||| ||||||||||
Sbjct: 672 tttgtcttcacatgacaattcgat 649
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>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
             sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 395   ataatatataagcaatatataagt 418
             |||||||||||| |||||||||||
Sbjct: 90004 ataatatataagtaatatataagt 90027
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>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   taaactaccatcacatagaa 119
             ||||||||||||||||||||
Sbjct: 36739 taaactaccatcacatagaa 36720
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>dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1568E2, complete
             sequence
          Length = 160612

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ctcccacctctctctcccac 202
             ||||||||||||||||||||
Sbjct: 66734 ctcccacctctctctcccac 66715
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>emb|AL845299.13| Mouse DNA sequence from clone RP23-375N8 on chromosome 2, complete
             sequence
          Length = 169070

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 173   tcctcctccgctcccacctctctctccc 200
             ||||||||| ||||| ||||||||||||
Sbjct: 61101 tcctcctcccctcccccctctctctccc 61128
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>emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chromosome 7, complete
             sequence
          Length = 165092

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   cttcatccggttcctcctccgctc 185
             |||||||| |||||||||||||||
Sbjct: 25235 cttcatcccgttcctcctccgctc 25258
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>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b,
            complete sequence
          Length = 43428

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 354  tctatgcactagacaaaccaaaca 377
            ||||||||| ||||||||||||||
Sbjct: 8470 tctatgcacaagacaaaccaaaca 8493


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,370,728
Number of Sequences: 3902068
Number of extensions: 5370728
Number of successful extensions: 104966
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104681
Number of HSP's gapped (non-prelim): 281
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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