>gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump
            ATPase (Ha1) mRNA, complete cds
          Length = 3446

 Score =  180 bits (91), Expect = 5e-43
 Identities = 102/107 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctcgtcttgcttccgcaagatcaccgactagttaggggaaagggtaaaacgattacacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3331 ctcgtcttgcttccgcaagatcaccgactagttaggggaaagggtaaaacgattacacca 3272

                                                           
Query: 61   cgccgtgctccaaacacggtatanntccactagancatttanacctc 107
            |||||||||||||||||||||||  ||||||||| |||| | |||||
Sbjct: 3271 cgccgtgctccaaacacggtataactccactagaacattaaaacctc 3225

>emb|AJ344078.1|HVU344078 Hordeum vulgare partial mRNA for plasma membrane H+-ATPase (ha1 gene)
          Length = 2280

 Score =  180 bits (91), Expect = 5e-43
 Identities = 102/107 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctcgtcttgcttccgcaagatcaccgactagttaggggaaagggtaaaacgattacacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 ctcgtcttgcttccgcaagatcaccgactagttaggggaaagggtaaaacgattacacca 2129

                                                           
Query: 61   cgccgtgctccaaacacggtatanntccactagancatttanacctc 107
            |||||||||||||||||||||||  ||||||||| |||| | |||||
Sbjct: 2128 cgccgtgctccaaacacggtataactccactagaacattaaaacctc 2082

>emb|Y09815.1|TAPSB5 T.aestivum mRNA for transmembrane proton pump, partial
          Length = 863

 Score = 77.8 bits (39), Expect = 6e-12
 Identities = 57/63 (90%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  aaaacgattaca-ccacgccgtgctccaaacacggtatanntccactagancatttanac 104
           |||||||||||| ||||||||||||||||||||||||||  ||||||||| |||| | ||
Sbjct: 830 aaaacgattacaaccacgccgtgctccaaacacggtataactccactagaacattaaaac 771

              
Query: 105 ctc 107
           |||
Sbjct: 770 ctc 768

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 10      cttccgcaagatcaccgac 28
               |||||||||||||||||||
Sbjct: 2158359 cttccgcaagatcaccgac 2158377

>emb|AJ249385.1|PST249385 Pseudomonas stutzeri pilT, pilU, ORF1 (partial) and ORF2 (partial)
           genes
          Length = 3440

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 10  cttccgcaagatcaccgac 28
           |||||||||||||||||||
Sbjct: 589 cttccgcaagatcaccgac 607

>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 39      aaagggtaaaacgattaca 57
               |||||||||||||||||||
Sbjct: 1956093 aaagggtaaaacgattaca 1956075


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 355,008
Number of Sequences: 3902068
Number of extensions: 355008
Number of successful extensions: 20868
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20848
Number of HSP's gapped (non-prelim): 20
length of query: 107
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 86
effective length of database: 17,151,101,840
effective search space: 1474994758240
effective search space used: 1474994758240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)