| Clone Name | rbaal28n15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479905.1| Oryza sativa (japonica cultivar-group), mRNA Length = 848 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgggttctagaagcttctgg 115 |||||||||||||||||||| Sbjct: 79 cgggttctagaagcttctgg 60
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgggttctagaagcttctgg 115 |||||||||||||||||||| Sbjct: 1572000 cgggttctagaagcttctgg 1571981
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gttctagaagcttctggcac 118 |||||||||||||||||||| Sbjct: 28704237 gttctagaagcttctggcac 28704256
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gttctagaagcttctggcac 118 |||||||||||||||||||| Sbjct: 87311 gttctagaagcttctggcac 87330
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgggttctagaagcttctgg 115 |||||||||||||||||||| Sbjct: 99488 cgggttctagaagcttctgg 99469
>dbj|AK071322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087N16, full insert sequence Length = 848 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgggttctagaagcttctgg 115 |||||||||||||||||||| Sbjct: 79 cgggttctagaagcttctgg 60
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 gttctagaagcttctggca 117 ||||||||||||||||||| Sbjct: 21847275 gttctagaagcttctggca 21847293
>gb|AC020601.10| Homo sapiens BAC clone RP11-451C14 from 2, complete sequence Length = 204164 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 tgcatcaatatccaatatg 63 ||||||||||||||||||| Sbjct: 45997 tgcatcaatatccaatatg 46015
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 gttctagaagcttctggca 117 ||||||||||||||||||| Sbjct: 139674 gttctagaagcttctggca 139692
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 gttctagaagcttctggca 117 ||||||||||||||||||| Sbjct: 30560 gttctagaagcttctggca 30578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 562,236 Number of Sequences: 3902068 Number of extensions: 562236 Number of successful extensions: 30719 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30674 Number of HSP's gapped (non-prelim): 45 length of query: 137 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 116 effective length of database: 17,151,101,840 effective search space: 1989527813440 effective search space used: 1989527813440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)