| Clone Name | rbaal29b24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113A03, full insert sequence Length = 1456 Score = 379 bits (191), Expect = e-102 Identities = 326/371 (87%) Strand = Plus / Minus Query: 302 gtctcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccac 361 ||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 989 gtctcgtcaaactccattttctttccacaaacagggcatgcttcacttctttccatccac 930 Query: 362 tcatagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctcc 421 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 929 tcataaatacagccaaggtggaaatgatgtgagcactgcataactatcctaggattctca 870 Query: 422 gaagtataatcttcaagacatgttgggcagacatcttcatcttcagtagatggagaaaag 481 |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| Sbjct: 869 gaagtataatcttcaagacaagttgggcagacatcttcatcttcagcggatggggaaaag 810 Query: 482 taggtgaaatagtttccagattcctttcgggataacttatctccataagcagagctgcat 541 || |||||||| ||||||| ||||||| | | ||| ||||||| || |||||||| | Sbjct: 809 tatgtgaaataatttccaggttcctttgttggcagcttctctccatgagtagagctgctt 750 Query: 542 cttttcatttttgtgtcatagtttgttttacttggcttgtcgactgaactcatggtttcc 601 |||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 749 cttttcatttttgtgtcatagtttgttttacttgacttatgtgttgaacttggtgtttcc 690 Query: 602 atttcctcatcataatttggtctgagtggttctgattgctctggtgaatggcttgaagga 661 |||||||| |||| ||||| || ||||||||||||| |||||| ||||||| |||||| Sbjct: 689 atttcctcgtcatcatttgccctcagtggttctgattcctctggggaatggcatgaaggt 630 Query: 662 tcatgccttga 672 |||||||||| Sbjct: 629 ccatgccttga 619
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 184 bits (93), Expect = 3e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcagtagatggagaaaagtaggtgaaat 491 |||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 130163 cttcaagacaagttgggcagacatcttcatcttcagcggatggggaaaagtatgtgaaat 130104 Query: 492 agtttccagattcctttcgggataacttatctccataagcagagctgcatcttttcattt 551 | ||||||| ||||||| | | ||| ||||||| || |||||||| ||||||||||| Sbjct: 130103 aatttccaggttcctttgttggcagcttctctccatgagtagagctgcttcttttcattt 130044 Query: 552 ttgtgtcatagtttgttttacttggcttgtcgactgaactcatggtttccatttcctcat 611 |||||||||||||||||||||||| ||| | |||||| |||||||||||||| | Sbjct: 130043 ttgtgtcatagtttgttttacttgacttatgtgttgaacttggtgtttccatttcctcgt 129984 Query: 612 cataatttggtctgagtggttctgattgctctggtgaatggcttgaaggatcatgccttg 671 ||| ||||| || ||||||||||||| |||||| ||||||| |||||| ||||||||| Sbjct: 129983 catcatttgccctcagtggttctgattcctctggggaatggcatgaaggtccatgccttg 129924 Query: 672 a 672 | Sbjct: 129923 a 129923 Score = 182 bits (92), Expect = 1e-42 Identities = 107/112 (95%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 |||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 130621 ctttccacaaacagggcatgcttcacttctttccatccactcataaatacagccaaggtg 130562 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatct 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 130561 gaaatgatgtgagcactgcattactatcctaggattctcagaagtataatct 130510
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 184 bits (93), Expect = 3e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcagtagatggagaaaagtaggtgaaat 491 |||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 23794125 cttcaagacaagttgggcagacatcttcatcttcagcggatggggaaaagtatgtgaaat 23794066 Query: 492 agtttccagattcctttcgggataacttatctccataagcagagctgcatcttttcattt 551 | ||||||| ||||||| | | ||| ||||||| || |||||||| ||||||||||| Sbjct: 23794065 aatttccaggttcctttgttggcagcttctctccatgagtagagctgcttcttttcattt 23794006 Query: 552 ttgtgtcatagtttgttttacttggcttgtcgactgaactcatggtttccatttcctcat 611 |||||||||||||||||||||||| ||| | |||||| |||||||||||||| | Sbjct: 23794005 ttgtgtcatagtttgttttacttgacttatgtgttgaacttggtgtttccatttcctcgt 23793946 Query: 612 cataatttggtctgagtggttctgattgctctggtgaatggcttgaaggatcatgccttg 671 ||| ||||| || ||||||||||||| |||||| ||||||| |||||| ||||||||| Sbjct: 23793945 catcatttgccctcagtggttctgattcctctggggaatggcatgaaggtccatgccttg 23793886 Query: 672 a 672 | Sbjct: 23793885 a 23793885 Score = 182 bits (92), Expect = 1e-42 Identities = 107/112 (95%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 |||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 23794583 ctttccacaaacagggcatgcttcacttctttccatccactcataaatacagccaaggtg 23794524 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatct 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23794523 gaaatgatgtgagcactgcattactatcctaggattctcagaagtataatct 23794472 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaagaaaattaaaagaaaga 116 |||||||||||||||||||| Sbjct: 18865671 aaagaaaattaaaagaaaga 18865652
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 184 bits (93), Expect = 3e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcagtagatggagaaaagtaggtgaaat 491 |||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 24105794 cttcaagacaagttgggcagacatcttcatcttcagcggatggggaaaagtatgtgaaat 24105735 Query: 492 agtttccagattcctttcgggataacttatctccataagcagagctgcatcttttcattt 551 | ||||||| ||||||| | | ||| ||||||| || |||||||| ||||||||||| Sbjct: 24105734 aatttccaggttcctttgttggcagcttctctccatgagtagagctgcttcttttcattt 24105675 Query: 552 ttgtgtcatagtttgttttacttggcttgtcgactgaactcatggtttccatttcctcat 611 |||||||||||||||||||||||| ||| | |||||| |||||||||||||| | Sbjct: 24105674 ttgtgtcatagtttgttttacttgacttatgtgttgaacttggtgtttccatttcctcgt 24105615 Query: 612 cataatttggtctgagtggttctgattgctctggtgaatggcttgaaggatcatgccttg 671 ||| ||||| || ||||||||||||| |||||| ||||||| |||||| ||||||||| Sbjct: 24105614 catcatttgccctcagtggttctgattcctctggggaatggcatgaaggtccatgccttg 24105555 Query: 672 a 672 | Sbjct: 24105554 a 24105554 Score = 182 bits (92), Expect = 1e-42 Identities = 107/112 (95%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 |||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 24106252 ctttccacaaacagggcatgcttcacttctttccatccactcataaatacagccaaggtg 24106193 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatct 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 24106192 gaaatgatgtgagcactgcattactatcctaggattctcagaagtataatct 24106141 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaagaaaattaaaagaaaga 116 |||||||||||||||||||| Sbjct: 19026308 aaagaaaattaaaagaaaga 19026289
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 178 bits (90), Expect = 2e-41 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcagtagatggagaaaagtaggtgaaat 491 |||||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||| | Sbjct: 137122 cttcaagacatgttgggcagacatcttcatcttcagcagatggggaaaaatagctgaagt 137063 Query: 492 agtttccagattcctttcgggataacttatctccataagcagagctgcatcttttcattt 551 | |||||| ||||||| | | | |||||||||||||||||||||||| ||||||||| Sbjct: 137062 aatttccatgttcctttggcggaaccttatctccataagcagagctgcaaattttcattt 137003 Query: 552 ttgtgtcatagtttgttttacttggcttgtcgactgaactcatggtttccatttcctcat 611 |||||| |||||||||||||||| |||||| | | ||| |||||||||||||||| Sbjct: 137002 ttgtgttgtagtttgttttacttgccttgtctattctactaggtgtttccatttcctcat 136943 Query: 612 ---cataatttggtctgagtggttctgattgctctggtgaatggcttg 656 ||| ||||| ||| ||||||||||||| |||||| |||||||||| Sbjct: 136942 caacatcatttgatctaagtggttctgattcctctggggaatggcttg 136895 Score = 151 bits (76), Expect = 4e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 137422 ctttccacagacagggcatgcctcacttctttccatccactcataaatacagccaaggtg 137363 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatct 433 |||||| ||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 137362 gaaatggtgtgagcactgcattactatcttaggattctcagaatcataatct 137311
>gb|AY107893.1| Zea mays PCO132838 mRNA sequence Length = 782 Score = 174 bits (88), Expect = 2e-40 Identities = 121/132 (91%) Strand = Plus / Minus Query: 302 gtctcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccac 361 ||||||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 336 gtctcgtcaaactccatcttctttccacagacagggcatgcctcacttctttccatccac 277 Query: 362 tcatagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctcc 421 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 276 tcataaatacagccaaggtggaaatggtgtgagcactgcattactatcctaggattctca 217 Query: 422 gaagtataatct 433 ||| ||||||| Sbjct: 216 gaatcataatct 205
>ref|NM_111096.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G02290 transcript variant AT3G02290.1 mRNA, complete cds Length = 1434 Score = 71.9 bits (36), Expect = 3e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtgagcactgcatt 403 |||||||| || ||||||||||| || || | |||||||||||| ||||| || | | Sbjct: 1054 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgtgaacattttgtc 995 Query: 404 actatcctaggattctccgaagtataatcttcaagacatgttgggcagacatcttcatct 463 || ||| | || ||||| || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 994 acaatctttgggttctctgatgtatattcttcaagacaagttgggcagacatcttcgtct 935 Query: 464 tcag 467 |||| Sbjct: 934 tcag 931
>ref|NM_202481.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G02290 transcript variant AT3G02290.2 mRNA, complete cds Length = 1840 Score = 71.9 bits (36), Expect = 3e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtgagcactgcatt 403 |||||||| || ||||||||||| || || | |||||||||||| ||||| || | | Sbjct: 1541 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgtgaacattttgtc 1482 Query: 404 actatcctaggattctccgaagtataatcttcaagacatgttgggcagacatcttcatct 463 || ||| | || ||||| || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 1481 acaatctttgggttctctgatgtatattcttcaagacaagttgggcagacatcttcgtct 1422 Query: 464 tcag 467 |||| Sbjct: 1421 tcag 1418
>gb|BT024610.1| Arabidopsis thaliana At3g02290 mRNA, complete cds Length = 696 Score = 71.9 bits (36), Expect = 3e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtgagcactgcatt 403 |||||||| || ||||||||||| || || | |||||||||||| ||||| || | | Sbjct: 647 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgtgaacattttgtc 588 Query: 404 actatcctaggattctccgaagtataatcttcaagacatgttgggcagacatcttcatct 463 || ||| | || ||||| || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 587 acaatctttgggttctctgatgtatattcttcaagacaagttgggcagacatcttcgtct 528 Query: 464 tcag 467 |||| Sbjct: 527 tcag 524
>gb|AY085549.1| Arabidopsis thaliana clone 156940 mRNA, complete sequence Length = 1214 Score = 71.9 bits (36), Expect = 3e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtgagcactgcatt 403 |||||||| || ||||||||||| || || | |||||||||||| ||||| || | | Sbjct: 834 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgtgaacattttgtc 775 Query: 404 actatcctaggattctccgaagtataatcttcaagacatgttgggcagacatcttcatct 463 || ||| | || ||||| || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 774 acaatctttgggttctctgatgtatattcttcaagacaagttgggcagacatcttcgtct 715 Query: 464 tcag 467 |||| Sbjct: 714 tcag 711
>gb|BT013989.1| Lycopersicon esculentum clone 133034F, mRNA sequence Length = 1383 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 424 agtataatcttcaagacatgttgggcagacatcttcatcttc 465 |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 882 agtatattcttcaagacatgtcgggcagacatcttcatcttc 841
>ref|NM_123251.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G38895 mRNA, complete cds Length = 1417 Score = 65.9 bits (33), Expect = 2e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||| || ||||||| |||||||| || ||||| ||||| ||||||| |||||| Sbjct: 886 ctttccacagacggggcaagtttcacttctctccatccattcataaatacagctaaggtg 827 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatcttcaagaca 441 |||||| || || |||| | | |||| | ||||||||| |||| ||||| ||||| || Sbjct: 826 gaaatggtgagaacacttggtgattatcttcggattctccaaagtgtaatcatcaaggca 767 Query: 442 tgttgggcagacatcttcatc 462 ||||| || | ||||||||| Sbjct: 766 ggttggacaaatatcttcatc 746
>gb|AY150493.1| Arabidopsis thaliana unknown protein (At5g38895) mRNA, complete cds Length = 697 Score = 65.9 bits (33), Expect = 2e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||| || ||||||| |||||||| || ||||| ||||| ||||||| |||||| Sbjct: 633 ctttccacagacggggcaagtttcacttctctccatccattcataaatacagctaaggtg 574 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatcttcaagaca 441 |||||| || || |||| | | |||| | ||||||||| |||| ||||| ||||| || Sbjct: 573 gaaatggtgagaacacttggtgattatcttcggattctccaaagtgtaatcatcaaggca 514 Query: 442 tgttgggcagacatcttcatc 462 ||||| || | ||||||||| Sbjct: 513 ggttggacaaatatcttcatc 493
>gb|AY035147.1| Arabidopsis thaliana unknown protein (At5g38895) mRNA, complete cds Length = 1130 Score = 65.9 bits (33), Expect = 2e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||| || ||||||| |||||||| || ||||| ||||| ||||||| |||||| Sbjct: 886 ctttccacagacggggcaagtttcacttctctccatccattcataaatacagctaaggtg 827 Query: 382 gaaatgatgtgagcactgcattactatcctaggattctccgaagtataatcttcaagaca 441 |||||| || || |||| | | |||| | ||||||||| |||| ||||| ||||| || Sbjct: 826 gaaatggtgagaacacttggtgattatcttcggattctccaaagtgtaatcatcaaggca 767 Query: 442 tgttgggcagacatcttcatc 462 ||||| || | ||||||||| Sbjct: 766 ggttggacaaatatcttcatc 746
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcag 467 ||||||||||||| |||||||||||||||||||||| Sbjct: 43559 cttcaagacatgtcgggcagacatcttcatcttcag 43524 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/69 (84%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||||||||| || |||||||| || |||||||| || || ||||| ||||| Sbjct: 43892 ctttccacaaacaggacagttttcacttctctccatccactcgtaaatgcagccgaggtg 43833 Query: 382 gaaatgatg 390 ||||||||| Sbjct: 43832 gaaatgatg 43824
>emb|BX822335.1|CNS0A5XV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1841 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/124 (81%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtgagcactgcatt 403 |||||||| || ||||||||||| || || | |||||||||||| ||| | || | | Sbjct: 1540 tcacttctctccatccactcataaatgcaactaaggtggaaatgctgttaacattttgtc 1481 Query: 404 actatcctaggattctccgaagtataatcttcaagacatgttgggcagacatcttcatct 463 || ||| | || ||||| || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 1480 acaatctttggcttctctgatgtatattcttcaagacaagttgggcagacatcttcgtct 1421 Query: 464 tcag 467 |||| Sbjct: 1420 tcag 1417
>emb|BX822233.1|CNS0A60J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/124 (81%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtgagcactgcatt 403 |||||||| || ||||||||||| || || | |||||||||||| ||| | || | | Sbjct: 1058 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgttaacattttgtc 999 Query: 404 actatcctaggattctccgaagtataatcttcaagacatgttgggcagacatcttcatct 463 || ||| | || ||||| || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 998 acaatctttgggttctctgatgtatattcttcaagacaagttgggcagacatcttcgtct 939 Query: 464 tcag 467 |||| Sbjct: 938 tcag 935
>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6 Length = 71736 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||| || ||||||| |||||||| || ||||| ||||| ||||||| |||||| Sbjct: 35543 ctttccacagacggggcaagtttcacttctctccatccattcataaatacagctaaggtg 35484 Query: 382 gaaatg 387 |||||| Sbjct: 35483 gaaatg 35478
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence, complete sequence Length = 94369 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 432 cttcaagacatgttgggcagacatcttcatcttcag 467 |||||||||| ||||||||||||||||| ||||||| Sbjct: 14781 cttcaagacaagttgggcagacatcttcgtcttcag 14816 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtga 393 |||||||| || ||||||||||| || || | |||||||||||| ||||| Sbjct: 14623 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgtga 14672
>dbj|AK221581.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-83-N21 Length = 1429 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcag 467 |||||||||| ||||||||||||||||| ||||||| Sbjct: 990 cttcaagacaagttgggcagacatcttcgtcttcag 955 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 344 tcacttctttcgatccactcatagatacagccaaggtggaaatgatgtga 393 |||||||| || ||||||||||| || || | |||||||||||| ||||| Sbjct: 1148 tcacttctctccatccactcataaatgcaactaaggtggaaatggtgtga 1099
>ref|NM_203056.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G15790 transcript variant AT5G15790.2 mRNA, complete cds Length = 1597 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 305 tcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccactca 364 |||||||||||||| |||||||||||||||||| |||||||| || ||||| ||| Sbjct: 1142 tcgtggaactccatcacctttccacaaacagggcagttttcacttctctccatccattca 1083 Query: 365 tagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaa 424 || || || | ||||||||||| || || |||| | || ||| | || ||||| || Sbjct: 1082 taaatgcaactgaggtggaaatggtgagaacactttgtaacaatcttcgggttctctgat 1023 Query: 425 gtataatcttcaagacatgttgggcagacatcttcatcttcag 467 | || ||||||||||| ||||| |||||||||||||| |||| Sbjct: 1022 atgtattcttcaagacacgttggacagacatcttcatcatcag 980
>ref|NM_121584.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G15790 transcript variant AT5G15790.1 mRNA, complete cds Length = 1510 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 305 tcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccactca 364 |||||||||||||| |||||||||||||||||| |||||||| || ||||| ||| Sbjct: 1055 tcgtggaactccatcacctttccacaaacagggcagttttcacttctctccatccattca 996 Query: 365 tagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaa 424 || || || | ||||||||||| || || |||| | || ||| | || ||||| || Sbjct: 995 taaatgcaactgaggtggaaatggtgagaacactttgtaacaatcttcgggttctctgat 936 Query: 425 gtataatcttcaagacatgttgggcagacatcttcatcttcag 467 | || ||||||||||| ||||| |||||||||||||| |||| Sbjct: 935 atgtattcttcaagacacgttggacagacatcttcatcatcag 893
>gb|AY140056.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1435 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 305 tcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccactca 364 |||||||||||||| |||||||||||||||||| |||||||| || ||||| ||| Sbjct: 1055 tcgtggaactccatcacctttccacaaacagggcagttttcacttctctccatccattca 996 Query: 365 tagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaa 424 || || || | ||||||||||| || || |||| | || ||| | || ||||| || Sbjct: 995 taaatgcaactgaggtggaaatggtgagaacactttgtaacaatcttcgggttctctgat 936 Query: 425 gtataatcttcaagacatgttgggcagacatcttcatcttcag 467 | || ||||||||||| ||||| |||||||||||||| |||| Sbjct: 935 atgtattcttcaagacacgttggacagacatcttcatcatcag 893
>gb|BT006270.1| Arabidopsis thaliana At5g15790 mRNA, complete cds Length = 699 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 305 tcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccactca 364 |||||||||||||| |||||||||||||||||| |||||||| || ||||| ||| Sbjct: 689 tcgtggaactccatcacctttccacaaacagggcagttttcacttctctccatccattca 630 Query: 365 tagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaa 424 || || || | ||||||||||| || || |||| | || ||| | || ||||| || Sbjct: 629 taaatgcaactgaggtggaaatggtgagaacactttgtaacaatcttcgggttctctgat 570 Query: 425 gtataatcttcaagacatgttgggcagacatcttcatcttcag 467 | || ||||||||||| ||||| |||||||||||||| |||| Sbjct: 569 atgtattcttcaagacacgttggacagacatcttcatcatcag 527
>emb|BX830561.1|CNS0A01O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1429 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 305 tcgtggaactccattttctttccacaaacagggcaagcctcacttctttcgatccactca 364 |||||||||||||| |||||||||||||||||| |||||||| || ||||| ||| Sbjct: 1136 tcgtggaactccatcacctttccacaaacagggcagttttcacttctctccatccattca 1077 Query: 365 tagatacagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaa 424 || || || | ||||||||||| || || |||| | || ||| | || ||||| || Sbjct: 1076 taaatgcaactgaggtggaaatggtgagaacactttgtaacaatcttcgggttctctgat 1017 Query: 425 gtataatcttcaagacatgttgggcagacatcttcatcttcag 467 | || ||||||||||| ||||| |||||||||||||| |||| Sbjct: 1016 atgtattcttcaagacacgttggacagacatcttcatcatcag 974
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 322 ctttccacaaacagggcaagcctcacttctttcgatccactcatagatacagccaaggtg 381 ||||||||||||||| || |||||||| || |||||||| || || ||||||||||| Sbjct: 66395 ctttccacaaacaggacagttttcacttctctccatccactcgtaaatgcagccaaggtg 66336 Query: 382 gaaatg 387 |||||| Sbjct: 66335 gaaatg 66330 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 443 gttgggcagacatcttcatcttcag 467 ||||| ||||||||||||||||||| Sbjct: 66087 gttggacagacatcttcatcttcag 66063
>emb|BX825069.1|CNS0A5MV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 50.1 bits (25), Expect = 0.010 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 416 ttctccgaagtataatcttcaagacatg-ttgggcagacatcttcatcttcag 467 ||||| || ||||| ||||||||||| | |||||||||||||||| ||||||| Sbjct: 984 ttctctgatgtatattcttcaagacaagcttgggcagacatcttcgtcttcag 932
>emb|BX831495.1|CNS09ZRP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1591 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 431 tcttcaagacatgttgggcagacatcttcatcttcag 467 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 1022 tcttcaagacacgttggacagacatcttcatcatcag 986 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 305 tcgtggaactccattttctttccacaaacagggca 339 |||||||||||||| |||||||||||||||||| Sbjct: 1149 tcgtggaactccatcacctttccacaaacagggca 1115
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcag 467 |||||||||| || |||||||||||||| ||||||| Sbjct: 53176 cttcaagacacgtcgggcagacatcttcgtcttcag 53141
>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project) Length = 96892 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttcag 467 |||||||||| ||||| |||||||||||||| |||| Sbjct: 66056 cttcaagacacgttggacagacatcttcatcatcag 66021
>ref|XM_463679.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 708 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 431 tcttcaagacatgttgggcagacatcttcatcttc 465 ||||| ||||| || |||||||||||||||||||| Sbjct: 554 tcttctagacaagtagggcagacatcttcatcttc 520
>emb|CR391986.5| Zebrafish DNA sequence from clone CH211-195O20 in linkage group 17, complete sequence Length = 131805 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 548 atttttgtgtcatagtttgttttactt 574 |||||||||||||| |||||||||||| Sbjct: 15884 atttttgtgtcatattttgttttactt 15910
>emb|CR847524.5| Zebrafish DNA sequence from clone DKEY-77M9 in linkage group 14, complete sequence Length = 149148 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 92 atttgaaagaaaattaaaagaaa 114 ||||||||||||||||||||||| Sbjct: 14226 atttgaaagaaaattaaaagaaa 14248
>dbj|AK073650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050H01, full insert sequence Length = 1092 Score = 46.1 bits (23), Expect = 0.15 Identities = 122/155 (78%) Strand = Plus / Minus Query: 311 aactccattttctttccacaaacagggcaagcctcacttctttcgatccactcatagata 370 |||||||||| ||| ||||||| || |||| ||||||||||| ||||| || |||||| Sbjct: 887 aactccatttccttcccacaaatcggacaagtatcacttctttccatccattcgtagata 828 Query: 371 cagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaagtataa 430 || | ||| || ||||||| ||||| | || ||| | ||||| || | ||| || Sbjct: 827 caactaagatgataatgatgggagcatttagctataatcttcggattgtctggagtgtat 768 Query: 431 tcttcaagacatgttgggcagacatcttcatcttc 465 ||||| ||||| || |||||||||||||||||||| Sbjct: 767 tcttctagacaagtagggcagacatcttcatcttc 733
>dbj|AK066457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065E10, full insert sequence Length = 1744 Score = 46.1 bits (23), Expect = 0.15 Identities = 122/155 (78%) Strand = Plus / Minus Query: 311 aactccattttctttccacaaacagggcaagcctcacttctttcgatccactcatagata 370 |||||||||| ||| ||||||| || |||| ||||||||||| ||||| || |||||| Sbjct: 1563 aactccatttccttcccacaaatcggacaagtatcacttctttccatccattcgtagata 1504 Query: 371 cagccaaggtggaaatgatgtgagcactgcattactatcctaggattctccgaagtataa 430 || | ||| || ||||||| ||||| | || ||| | ||||| || | ||| || Sbjct: 1503 caactaagatgataatgatgggagcatttagctataatcttcggattgtctggagtgtat 1444 Query: 431 tcttcaagacatgttgggcagacatcttcatcttc 465 ||||| ||||| || |||||||||||||||||||| Sbjct: 1443 tcttctagacaagtagggcagacatcttcatcttc 1409
>gb|AC161236.6| Mus musculus chromosome 3, clone RP23-403O4, complete sequence Length = 206652 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 543 ttttcatttttgtgtcatagtt 564 |||||||||||||||||||||| Sbjct: 175708 ttttcatttttgtgtcatagtt 175687
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 gaaagaaaattaaaagaaagaa 117 |||||||||||||||||||||| Sbjct: 1620097 gaaagaaaattaaaagaaagaa 1620118 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 catcttcatcttcagtagat 472 |||||||||||||||||||| Sbjct: 26830840 catcttcatcttcagtagat 26830859
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttc 465 |||| ||||| || |||||||||||||||||||| Sbjct: 40602116 cttctagacaagtagggcagacatcttcatcttc 40602083
>gb|AC101891.8| Mus musculus chromosome 3, clone RP23-468J10, complete sequence Length = 174044 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 543 ttttcatttttgtgtcatagtt 564 |||||||||||||||||||||| Sbjct: 56311 ttttcatttttgtgtcatagtt 56290
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttc 465 |||| ||||| || |||||||||||||||||||| Sbjct: 44094 cttctagacaagtagggcagacatcttcatcttc 44061
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 gaaagaaaattaaaagaaagaa 117 |||||||||||||||||||||| Sbjct: 147585 gaaagaaaattaaaagaaagaa 147606
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 gaaagaaaattaaaagaaagaa 117 |||||||||||||||||||||| Sbjct: 19597 gaaagaaaattaaaagaaagaa 19618
>emb|X60755.1|CANADPHIO C.arietinum mRNA for NADPH:isoflavone oxidoreductase Length = 1183 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 89 gccatttgaaagaaaattaaaagaaa 114 ||||||| |||||||||||||||||| Sbjct: 1094 gccatttaaaagaaaattaaaagaaa 1069
>emb|AL355176.10| Mouse DNA sequence from clone RP21-505L19 on chromosome 5, complete sequence Length = 151349 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 98 aagaaaattaaaagaaagaattgttt 123 |||||||| ||||||||||||||||| Sbjct: 99 aagaaaataaaaagaaagaattgttt 124
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 cttcaagacatgttgggcagacatcttcatcttc 465 |||| ||||| || |||||||||||||||||||| Sbjct: 82131 cttctagacaagtagggcagacatcttcatcttc 82098
>gb|AC145798.2| Xenopus tropicalis clone CH216-53L7, complete sequence Length = 156486 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaaaattaaaagaaagaattg 120 ||||||||||||||||||||| Sbjct: 67109 gaaaattaaaagaaagaattg 67089
>gb|AY441531.1| Hapalemur griseus SINE element HL3 Length = 751 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 aaaattaaaagaaagaattgtttat 125 ||||| ||||||||||||||||||| Sbjct: 206 aaaatgaaaagaaagaattgtttat 230
>gb|AC149073.2| Sequence of an X. tropicalis BAC clone containing the bambi gene, complete sequence Length = 75688 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaaaattaaaagaaagaattg 120 ||||||||||||||||||||| Sbjct: 18879 gaaaattaaaagaaagaattg 18899
>gb|AY794736.1| Adriana tomentosa var. tomentosa tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 993 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 tgaaagaaaattaaaagaaagaattgttt 123 ||||||||||| |||| |||||||||||| Sbjct: 313 tgaaagaaaataaaaaaaaagaattgttt 341
>ref|XM_992880.1| PREDICTED: Mus musculus RIKEN cDNA 4933407H18 gene, transcript variant 2 (4933407H18Rik), mRNA Length = 10077 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 4479 aggtggaaatgatgtgagcac 4459
>ref|XM_132005.5| PREDICTED: Mus musculus RIKEN cDNA 4933407H18 gene, transcript variant 1 (4933407H18Rik), mRNA Length = 10077 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 4479 aggtggaaatgatgtgagcac 4459
>ref|XM_911619.2| PREDICTED: Mus musculus RIKEN cDNA 4933407H18 gene, transcript variant 4 (4933407H18Rik), mRNA Length = 10078 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 4479 aggtggaaatgatgtgagcac 4459
>gb|BC061483.1| Mus musculus RIKEN cDNA 4933407H18 gene, mRNA (cDNA clone IMAGE:6514125), partial cds Length = 5621 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 3234 aggtggaaatgatgtgagcac 3214
>gb|AC117235.3| Mus musculus BAC clone RP23-415F18 from 17, complete sequence Length = 207331 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 agaaaattaaaagaaagaatt 119 ||||||||||||||||||||| Sbjct: 78487 agaaaattaaaagaaagaatt 78467
>ref|XM_652499.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (1.t00013) partial mRNA Length = 2439 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ttgaaagaaaattaaaagaaa 114 ||||||||||||||||||||| Sbjct: 722 ttgaaagaaaattaaaagaaa 742
>gb|AC163888.2| Glomus intraradices clone JGIATSX-5H14, complete sequence Length = 34934 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 586 tgaactcatggtttccatttcctca 610 ||||||||| ||||||||||||||| Sbjct: 17598 tgaactcattgtttccatttcctca 17574
>emb|Z75407.2|HSN128A12 Human DNA sequence from clone LL22NC03-128A12 on chromosome 22, complete sequence Length = 41576 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aactccattttctttccacaa 331 ||||||||||||||||||||| Sbjct: 36726 aactccattttctttccacaa 36746
>emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, the CD34 gene for CD34 antigen and the 3' end of the PLXNA2 gene for plexin A2, complete sequence Length = 198906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 tcatcataatttggtctgagt 628 ||||||||||||||||||||| Sbjct: 53691 tcatcataatttggtctgagt 53671
>emb|AL138813.8| Human DNA sequence from clone RP1-305K11 on chromosome 11p13-14.2 Contains STSs and GSSs, complete sequence Length = 76738 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aaagaaaattaaaagaaagaa 117 ||||||||||||||||||||| Sbjct: 11918 aaagaaaattaaaagaaagaa 11938
>dbj|AK170675.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113H19 product:unclassifiable, full insert sequence Length = 2963 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 518 aggtggaaatgatgtgagcac 498
>dbj|AK040506.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430104C13 product:hypothetical protein, full insert sequence Length = 5622 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 4379 aggtggaaatgatgtgagcac 4359
>dbj|AK043466.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730098H14 product:unclassifiable, full insert sequence Length = 2790 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 agatgttaatccaagacactt 279 ||||||||||||||||||||| Sbjct: 85 agatgttaatccaagacactt 65
>gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-277B22, complete sequence Length = 163386 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aaagaaaattaaaagaaagaa 117 ||||||||||||||||||||| Sbjct: 28866 aaagaaaattaaaagaaagaa 28846
>emb|AL808014.8| Mouse DNA sequence from clone RP23-142A6 on chromosome X, complete sequence Length = 138307 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccaatatactctactaaatag 173 ||||||||||||||||||||| Sbjct: 136351 ccaatatactctactaaatag 136331
>dbj|AK129384.1| Mus musculus mRNA for mKIAA1530 protein Length = 6423 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 4059 aggtggaaatgatgtgagcac 4039
>emb|CR450784.5| Zebrafish DNA sequence from clone CH211-269A1 in linkage group 18, complete sequence Length = 39446 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tcacttgaggatcaaaacatg 39 ||||||||||||||||||||| Sbjct: 35765 tcacttgaggatcaaaacatg 35785
>emb|CR293524.10| Zebrafish DNA sequence from clone DKEY-57M7 in linkage group 18, complete sequence Length = 190196 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tcacttgaggatcaaaacatg 39 ||||||||||||||||||||| Sbjct: 80568 tcacttgaggatcaaaacatg 80588
>emb|AL935315.3| Zebrafish DNA sequence from clone DKEY-3H18 in linkage group 18, complete sequence Length = 65433 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 tcacttgaggatcaaaacatg 39 ||||||||||||||||||||| Sbjct: 57627 tcacttgaggatcaaaacatg 57607
>gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, complete sequence Length = 217930 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aggtggaaatgatgtgagcac 397 ||||||||||||||||||||| Sbjct: 127187 aggtggaaatgatgtgagcac 127207
>emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on chromosome 1q32.2-32.3, complete sequence Length = 160771 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 tcatcataatttggtctgagt 628 ||||||||||||||||||||| Sbjct: 51802 tcatcataatttggtctgagt 51782
>gb|AC170262.2| Mus musculus BAC clone RP23-163J7 from chromosome 17, complete sequence Length = 219714 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 agaaaattaaaagaaagaatt 119 ||||||||||||||||||||| Sbjct: 1110 agaaaattaaaagaaagaatt 1130
>emb|AL929129.6| Mouse DNA sequence from clone RP23-238P9 on chromosome 2, complete sequence Length = 139558 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 aaagaaaattaaaagaaagaattgtttat 125 |||||||| |||||||||||| ||||||| Sbjct: 51044 aaagaaaactaaaagaaagaaatgtttat 51016
>emb|AL662932.10| Mouse DNA sequence from clone RP23-15B7 on chromosome X, complete sequence Length = 218740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccaatatactctactaaatag 173 ||||||||||||||||||||| Sbjct: 44 ccaatatactctactaaatag 24
>emb|AL590968.8| Mouse DNA sequence from clone RP23-392I3 on chromosome 11, complete sequence Length = 217092 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agatgttaatccaagacactt 279 ||||||||||||||||||||| Sbjct: 214642 agatgttaatccaagacactt 214662
>ref|NM_184791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 335 gggcaagcctcacttctttcgatccactcatagatacagccaaggtggaaat 386 |||||||| | |||||| || ||||||||||| ||||| | ||| ||||||| Sbjct: 602 gggcaagcttgacttctctccatccactcataaatacaacaaagatggaaat 551
>gb|AC150577.4| Bos taurus BAC CH240-268P24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167618 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 catttgaaagaaaattaaaa 110 |||||||||||||||||||| Sbjct: 72867 catttgaaagaaaattaaaa 72848
>gb|AY423162.1| Loxostigma sp. RBGE 19962309 Gcyc1D protein (Gcyc1D) gene, partial cds Length = 663 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AY423161.1| Loxostigma sp. RBGE 19962309 Gcyc1C protein (Gcyc1C) gene, partial cds Length = 630 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AY423160.1| Cyrtandra apiculata isolate DNA-T90 Gcyc1 protein (Gcyc1) gene, partial cds Length = 663 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AY423159.1| Didymocarpus citrinus isolate DNA-G78 Gcyc1D protein (Gcyc1D) gene, partial cds Length = 663 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AY423158.1| Didymocarpus citrinus isolate DNA-G78 Gcyc1C protein (Gcyc1C) gene, partial cds Length = 630 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AY423146.1| Epithema benthamii isolate DNA-CW15 Gcyc2 protein (Gcyc2) gene, partial cds Length = 564 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaagaaaattaaaagaaaga 116 |||||||||||||||||||| Sbjct: 131502 aaagaaaattaaaagaaaga 131483
>gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromosome 6, complete sequence Length = 196547 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gatggagaaaagtaggtgaa 489 |||||||||||||||||||| Sbjct: 99818 gatggagaaaagtaggtgaa 99799
>ref|XM_461680.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G03652g) partial mRNA Length = 4773 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 catttgaaagaaaattaaaa 110 |||||||||||||||||||| Sbjct: 3126 catttgaaagaaaattaaaa 3107
>gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, complete sequence Length = 222692 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ggtggaaatgatgtgagcac 397 |||||||||||||||||||| Sbjct: 161540 ggtggaaatgatgtgagcac 161521
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 actcatggtttccatttcct 608 |||||||||||||||||||| Sbjct: 158269 actcatggtttccatttcct 158288
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 335 gggcaagcctcacttctttcgatccactcatagatacagccaaggtggaaat 386 |||||||| | |||||| || ||||||||||| ||||| | ||| ||||||| Sbjct: 22142519 gggcaagcttgacttctctccatccactcataaatacaacaaagatggaaat 22142468
>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome Length = 490885 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 atttgaaagaaaattaaaagaaag 115 ||||||||||| |||||||||||| Sbjct: 468406 atttgaaagaatattaaaagaaag 468383
>gb|AY166421.1| Scrophularia californica clone 25.27A TCP gene, partial sequence Length = 365 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 atcttcaagacatgttgggc 449 |||||||||||||||||||| Sbjct: 64 atcttcaagacatgttgggc 83
>gb|AY168150.1| Scrophularia californica ScTCP6 TCP protein (TCP) gene, partial cds Length = 365 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 atcttcaagacatgttgggc 449 |||||||||||||||||||| Sbjct: 64 atcttcaagacatgttgggc 83
>emb|AL356384.9| Human DNA sequence from clone RP11-436I5 on chromosome 13, complete sequence Length = 95896 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tttgaaagaaaattaaaaga 112 |||||||||||||||||||| Sbjct: 19149 tttgaaagaaaattaaaaga 19168
>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence Length = 170292 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 actcatggtttccatttcct 608 |||||||||||||||||||| Sbjct: 145023 actcatggtttccatttcct 145004
>gb|AC124424.4| Mus musculus BAC clone RP24-230J3 from chromosome 2, complete sequence Length = 190802 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 548 atttttgtgtcatagtttgtttta 571 |||||||||||||| ||||||||| Sbjct: 16263 atttttgtgtcataatttgtttta 16286
>gb|AC111131.8| Mus musculus, clone RP23-340N7, complete sequence Length = 202386 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tgaaagaaaattaaaagaaa 114 |||||||||||||||||||| Sbjct: 195842 tgaaagaaaattaaaagaaa 195823
>gb|AY225090.1| Staphylococcus aureus strain Tager 104 staphylocoagulase gene, partial cds Length = 1980 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gtttgttttacttggcttgt 581 |||||||||||||||||||| Sbjct: 1758 gtttgttttacttggcttgt 1739
>gb|AC006016.3| Homo sapiens PAC clone RP5-968I16 from 7, complete sequence Length = 160457 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 catttgaaagaaaattaaaa 110 |||||||||||||||||||| Sbjct: 82432 catttgaaagaaaattaaaa 82451
>gb|AC142349.1| Pan troglodytes BAC clone RP43-9F6 from 7, complete sequence Length = 192143 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 catttgaaagaaaattaaaa 110 |||||||||||||||||||| Sbjct: 17607 catttgaaagaaaattaaaa 17626
>emb|AL772411.1| Human DNA sequence from clone RP11-180N18 on chromosome 1 Contains the AHCYL1 S-adenosylhomocysteine hydrolase-like 1 and the 5' end of gene KIAA1761 (FLJ14743), complete sequence Length = 81378 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tttccatttcctcatcataa 616 |||||||||||||||||||| Sbjct: 68883 tttccatttcctcatcataa 68902
>emb|AL590559.3| Human DNA sequence from clone RP11-393N21 on chromosome 1 Contains the 5' end of the gene for PAI-1 mRNA-binding protein (PAI-RBP1), a poly(A) binding protein, cytoplasmic 4 (PABPC4) pseudogene, a novel gene and a CpG island, complete sequence Length = 150651 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 tttgaaagaaaattaaaagaaaga 116 ||||||||||||||||||| |||| Sbjct: 123844 tttgaaagaaaattaaaaggaaga 123867
>emb|AL390722.10| Human DNA sequence from clone RP11-474J1 on chromosome 13, complete sequence Length = 118499 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agaaaattaaaagaaagaat 118 |||||||||||||||||||| Sbjct: 94882 agaaaattaaaagaaagaat 94863
>emb|AL356059.27| Human DNA sequence from clone RP11-192G4 on chromosome 1 Contains part of the COL24A1 gene for collagen type XXIV alpha 1, complete sequence Length = 76418 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aagaaaattaaaagaaagaa 117 |||||||||||||||||||| Sbjct: 25220 aagaaaattaaaagaaagaa 25239
>emb|AL355531.16| Human DNA sequence from clone RP11-300B2 on chromosome 10 Contains the 5' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase, complete sequence Length = 213887 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 aaagtaggtgaaatagtttc 497 |||||||||||||||||||| Sbjct: 19316 aaagtaggtgaaatagtttc 19335
>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence Length = 166245 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 aaaattaaaagaaagaattgttta 124 |||||||||||||||||| ||||| Sbjct: 105790 aaaattaaaagaaagaatggttta 105767
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 catttgaaagaaaattaaaa 110 |||||||||||||||||||| Sbjct: 275829 catttgaaagaaaattaaaa 275810
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 catcttcatcttcagtagat 472 |||||||||||||||||||| Sbjct: 51979 catcttcatcttcagtagat 51998
>emb|AL662858.15| Mouse DNA sequence from clone RP23-166O21 on chromosome 11, complete sequence Length = 195612 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 catcttttcatttttgtgtc 558 |||||||||||||||||||| Sbjct: 176621 catcttttcatttttgtgtc 176602
>dbj|AK125054.1| Homo sapiens cDNA FLJ43064 fis, clone BRTHA3008386 Length = 4871 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tttccatttcctcatcataa 616 |||||||||||||||||||| Sbjct: 98 tttccatttcctcatcataa 117
>dbj|AB042574.1| Staphylococcus aureus coa gene for coagulase, partial cds, strain:104 Length = 585 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gtttgttttacttggcttgt 581 |||||||||||||||||||| Sbjct: 360 gtttgttttacttggcttgt 341
>gb|AC008627.7| Homo sapiens chromosome 5 clone CTB-160O22, complete sequence Length = 153553 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aaggggaacaagtttcccct 84 |||||||||||||||||||| Sbjct: 19246 aaggggaacaagtttcccct 19265
>gb|AF208329.1| Conandron ramondioides Gcyc1 protein (Gcyc1) gene, partial cds Length = 636 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AF208328.1| Primulina tabacum Gcyc1 protein (Gcyc1) gene, partial cds Length = 627 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AF208321.1| Conandron ramondioides isolate B-1 Gcyc1 protein (Gcyc1) gene, partial cds Length = 629 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AF208320.1| Primulina tabacum isolate 1 Gcyc1 protein (Gcyc1) gene, partial cds Length = 620 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 tgttttacttggcttgtcga 584 |||||||||||||||||||| Sbjct: 30 tgttttacttggcttgtcga 11
>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182489 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 tcatcataatttggtctgag 627 |||||||||||||||||||| Sbjct: 166659 tcatcataatttggtctgag 166640
>gb|DQ139261.1| Vibro sp. DAT722 inDAT722 integron, complete sequence and flanking sequences Length = 136095 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 atcttcagtagatggagaaaagta 483 |||| ||||||||||||||||||| Sbjct: 14642 atctccagtagatggagaaaagta 14619
>gb|AC101685.9| Mus musculus chromosome 5, clone RP23-187K3, complete sequence Length = 185522 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ggtggaaatgatgtgagcac 397 |||||||||||||||||||| Sbjct: 178777 ggtggaaatgatgtgagcac 178796
>ref|NM_058323.2| Caenorhabditis elegans R119.7 (R119.7) mRNA, complete cds Length = 2034 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gtctcgtggaactccattttcttt 325 |||||||||||||||||| ||||| Sbjct: 1376 gtctcgtggaactccattgtcttt 1353
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 catcttcatcttcagtagat 472 |||||||||||||||||||| Sbjct: 20805254 catcttcatcttcagtagat 20805273
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 335 gggcaagcctcacttctttcgatccactcatagatacagccaaggtggaaat 386 |||||||| | |||||| || ||||||||||| ||||| | ||| ||||||| Sbjct: 22135548 gggcaagcttgacttctctccatccactcataaatacaacaaagatggaaat 22135497
>gb|AC113009.8| Homo sapiens chromosome 8, clone RP11-7F12, complete sequence Length = 159520 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aaagaattgtttatatgcac 131 |||||||||||||||||||| Sbjct: 152589 aaagaattgtttatatgcac 152570
>gb|AC097465.2| Homo sapiens BAC clone RP11-24I21 from 4, complete sequence Length = 172557 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 tgcatcttttcatttttgtg 556 |||||||||||||||||||| Sbjct: 143074 tgcatcttttcatttttgtg 143093
>dbj|AB158549.1| Staphylococcus aureus genes for hypothetical proteins, staphylocoagulase, acetyl-CoA acetyltransferase homologue, complete cds, strain:104 Length = 6289 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gtttgttttacttggcttgt 581 |||||||||||||||||||| Sbjct: 4297 gtttgttttacttggcttgt 4278
>gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172136 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ttttctttccacaaacaggg 337 |||||||||||||||||||| Sbjct: 3894 ttttctttccacaaacaggg 3913
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 335 gggcaagcctcacttctttcgatccactcatagatacagccaaggtggaaat 386 |||||||| | |||||| || ||||||||||| ||||| | ||| ||||||| Sbjct: 5763 gggcaagcttgacttctctccatccactcataaatacaacaaagatggaaat 5814
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 335 gggcaagcctcacttctttcgatccactcatagatacagccaaggtggaaat 386 |||||||| | |||||| || ||||||||||| ||||| | ||| ||||||| Sbjct: 82343 gggcaagcttgacttctctccatccactcataaatacaacaaagatggaaat 82394
>gb|AC064852.4| Homo sapiens BAC clone RP11-174L18 from 2, complete sequence Length = 152781 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aaagaattgtttatatgcac 131 |||||||||||||||||||| Sbjct: 43309 aaagaattgtttatatgcac 43290
>gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, complete sequence Length = 61985 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 catttgaaagaaaattaaaagaaa 114 ||||||| |||||||||||||||| Sbjct: 27679 catttgagagaaaattaaaagaaa 27656
>emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 in linkage group 16, complete sequence Length = 169830 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tattttcaggttaccacatg 258 |||||||||||||||||||| Sbjct: 47360 tattttcaggttaccacatg 47379
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 catcttcatcttcagtagat 472 |||||||||||||||||||| Sbjct: 174182 catcttcatcttcagtagat 174201
>emb|BX005255.10| Mouse DNA sequence from clone RP23-228N14 on chromosome X, complete sequence Length = 230114 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tgaaagaaaattaaaagaaa 114 |||||||||||||||||||| Sbjct: 179685 tgaaagaaaattaaaagaaa 179666
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 catcttcatcttcagtagat 472 |||||||||||||||||||| Sbjct: 93630 catcttcatcttcagtagat 93649
>emb|AJ306908.1|SAU306908 Staphylococcus aureus coa gene for coagulase Length = 2165 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gtttgttttacttggcttgt 581 |||||||||||||||||||| Sbjct: 2102 gtttgttttacttggcttgt 2083
>dbj|AK108026.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A02, full insert sequence Length = 1418 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 335 gggcaagcctcacttctttcgatccactcatagatacagccaaggtggaaat 386 |||||||| | |||||| || ||||||||||| ||||| | ||| ||||||| Sbjct: 1081 gggcaagcttgacttctctccatccactcataaatacaacaaagatggaaat 1030
>gb|AF063007.3| Caenorhabditis elegans cosmid R119, complete sequence Length = 38976 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gtctcgtggaactccattttcttt 325 |||||||||||||||||| ||||| Sbjct: 9824 gtctcgtggaactccattgtcttt 9801
>emb|CR352256.11| Zebrafish DNA sequence from clone CH211-218G23 in linkage group 11, complete sequence Length = 111902 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 tcatggtttccatttcctca 610 |||||||||||||||||||| Sbjct: 96786 tcatggtttccatttcctca 96805
>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete sequence Length = 197360 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aaagaattgtttatatgcac 131 |||||||||||||||||||| Sbjct: 124515 aaagaattgtttatatgcac 124534
>emb|AL929070.15| Mouse DNA sequence from clone RP23-199L4 on chromosome 2, complete sequence Length = 143861 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 atttttgtgtcatagtttgtttta 571 |||||||||||||| ||||||||| Sbjct: 41685 atttttgtgtcataatttgtttta 41662
>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10, complete sequence Length = 243665 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 642 ctggtgaatggcttgaagga 661 |||||||||||||||||||| Sbjct: 41871 ctggtgaatggcttgaagga 41890
>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete sequence Length = 189040 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tgaaagaaaattaaaagaaa 114 |||||||||||||||||||| Sbjct: 106681 tgaaagaaaattaaaagaaa 106662
>emb|CR848755.12| Zebrafish DNA sequence from clone DKEY-85M3 in linkage group 16, complete sequence Length = 81968 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 642 ctggtgaatggcttgaagga 661 |||||||||||||||||||| Sbjct: 9067 ctggtgaatggcttgaagga 9048
>gb|U31081.1|BSU31081 Bacillus sp. strain SG-1 spore-associated manganese oxidation gene cluster, mnxA, mnxB, mnxC, mnxD, mnxE, mnxF, and mnxG genes, complete cds Length = 7039 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ttctttccacaaacagggca 339 |||||||||||||||||||| Sbjct: 3767 ttctttccacaaacagggca 3748 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,778,374 Number of Sequences: 3902068 Number of extensions: 7778374 Number of successful extensions: 180372 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 179501 Number of HSP's gapped (non-prelim): 866 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)