| Clone Name | rbaal29a14 |
|---|---|
| Clone Library Name | barley_pub |
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 228 bits (580), Expect = 7e-60 Identities = 104/113 (92%), Positives = 109/113 (96%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 L+LIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G+GSP K+KE Sbjct: 158 LVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKE 217 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAFAPK 117 LRTKEIKNGRLAMLAVMGAWFQ YTGTGPIDNLFAHLADPGHATIF AF+PK Sbjct: 218 LRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270 Score = 34.3 bits (77), Expect = 0.15 Identities = 21/57 (36%), Positives = 27/57 (47%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPID 180 D PG FDPLG G+ PE LK E+ + R AML G + T G ++ Sbjct: 79 DGSLPGDFGFDPLGLGS-DPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLN 134
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 228 bits (580), Expect = 7e-60 Identities = 104/113 (92%), Positives = 109/113 (96%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 L+LIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G+GSP K+KE Sbjct: 158 LVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKE 217 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAFAPK 117 LRTKEIKNGRLAMLAVMGAWFQ YTGTGPIDNLFAHLADPGHATIF AF+PK Sbjct: 218 LRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Frame = -3 Query: 398 CVNTDPIFP-----NNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAML 234 CV DP P + D PG FDPLG + PE L+ + E+ + R AML Sbjct: 58 CVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLAS-DPESLRWNQQAELVHCRWAML 116 Query: 233 AVMGAWFQAEYTGTG 189 G + T G Sbjct: 117 GAAGIFIPELLTKIG 131
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 98.6 bits (244), Expect = 7e-21 Identities = 53/109 (48%), Positives = 65/109 (59%) Frame = -3 Query: 452 ILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKEL 273 IL + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + +E Sbjct: 148 ILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFAP-----TQEA 201 Query: 272 RTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAF 126 + KE+ NGRLAMLA +G Q TG GP +NL HL+DP H TI + F Sbjct: 202 KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250 Score = 35.8 bits (81), Expect = 0.053 Identities = 26/61 (42%), Positives = 30/61 (49%) Frame = -3 Query: 362 LTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 183 LTG+ G G FDPLG PE LK E+ NGR AML V G +T G I Sbjct: 67 LTGSLAGDNG---FDPLGLAE-DPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII 122 Query: 182 D 180 + Sbjct: 123 N 123
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 91.7 bits (226), Expect = 8e-19 Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 2/103 (1%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGYGTGSPEKL 282 + L+G+AE RR+ D KPG + K G D YPGG F+PLG+G + + Sbjct: 160 MALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDE-KSM 218 Query: 281 KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 KEL+ KEIKNGRLAMLA++G + QA TG GP NL HLADP Sbjct: 219 KELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADP 261 Score = 34.3 bits (77), Expect = 0.15 Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = -3 Query: 362 LTGTDVGYPGGLWFDPLGY----GTGSPEKLKELRTKEIKNGRLAMLAVMGA 219 L+ D PG FDPLG GTG + K L E+ NGR AML GA Sbjct: 63 LSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGA 114
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 80.1 bits (196), Expect = 2e-15 Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 1/76 (1%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQ-AEYTGTGPIDNLFAH 165 YPGG FDPLGY P K +EL+ KEIKNGRLA+LA++G Q + Y GTGP++NL H Sbjct: 168 YPGGA-FDPLGYSK-DPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATH 225 Query: 164 LADPGHATIFRAFAPK 117 LADP H I PK Sbjct: 226 LADPWHNNIGDVIIPK 241
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 75.9 bits (185), Expect = 5e-14 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 6/92 (6%) Frame = -3 Query: 377 FPNNKLTGTDVG---YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQA 207 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + QA Sbjct: 176 FRINGLDGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQA 234 Query: 206 EYTGTGPIDNLFAHLADP--GHATIFRA-FAP 120 TG GP++NLF HL DP +A +F FAP Sbjct: 235 IVTGKGPLENLFDHLDDPVANNAWVFATKFAP 266
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 75.1 bits (183), Expect = 8e-14 Identities = 40/68 (58%), Positives = 46/68 (67%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 241 Query: 176 LFAHLADP 153 LF H+ADP Sbjct: 242 LFDHVADP 249
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 75.1 bits (183), Expect = 8e-14 Identities = 40/68 (58%), Positives = 46/68 (67%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 184 GLDPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 241 Query: 176 LFAHLADP 153 LF HLADP Sbjct: 242 LFDHLADP 249
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 74.7 bits (182), Expect = 1e-13 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = -3 Query: 422 WA-DIIKPGCVNTDPIFPNNKL-TGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNG 249 WA +I G V + N L D+ YPGG FDPLG T PE EL+ KE+KNG Sbjct: 162 WATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNG 219 Query: 248 RLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 RLAM ++ G + QA TG GPI+NL HLADP Sbjct: 220 RLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 74.7 bits (182), Expect = 1e-13 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = -3 Query: 422 WA-DIIKPGCVNTDPIFPNNKL-TGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNG 249 WA +I G V + N L D+ YPGG FDPLG T PE EL+ KE+KNG Sbjct: 162 WATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNG 219 Query: 248 RLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 RLAM ++ G + QA TG GPI+NL HLADP Sbjct: 220 RLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 73.9 bits (180), Expect = 2e-13 Identities = 39/68 (57%), Positives = 46/68 (67%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 241 Query: 176 LFAHLADP 153 L+ H+ADP Sbjct: 242 LYDHVADP 249
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 73.9 bits (180), Expect = 2e-13 Identities = 40/67 (59%), Positives = 45/67 (67%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP+DNL Sbjct: 187 TDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNL 244 Query: 173 FAHLADP 153 HLADP Sbjct: 245 VDHLADP 251
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 73.6 bits (179), Expect = 2e-13 Identities = 39/66 (59%), Positives = 46/66 (69%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLF 171 D+ YPGG FDPLG T PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL Sbjct: 187 DLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 244 Query: 170 AHLADP 153 HLADP Sbjct: 245 DHLADP 250
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 73.6 bits (179), Expect = 2e-13 Identities = 38/68 (55%), Positives = 46/68 (67%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG P+ EL+ KE+KNGRLAM ++ G + QA TG GPI+N Sbjct: 182 GLDKVYPGGA-FDPLGLAD-DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 239 Query: 176 LFAHLADP 153 LF H+ADP Sbjct: 240 LFDHVADP 247
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 73.2 bits (178), Expect = 3e-13 Identities = 49/101 (48%), Positives = 58/101 (57%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 +IL+G EG R A P TDPI YPGG FDPLG PE L E Sbjct: 156 VILMGAVEGYRIAG--GPLGEVTDPI------------YPGGS-FDPLGLAD-DPEALAE 199 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KE+KNGRLAM ++ G + QA TG GP++NL HLADP Sbjct: 200 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 240
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 73.2 bits (178), Expect = 3e-13 Identities = 37/73 (50%), Positives = 47/73 (64%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG +FDPLG PEK +L+ EIK+ RLAM+A +G QA TG GP++N HL Sbjct: 217 YPGGKFFDPLGLAA-DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275 Query: 161 ADPGHATIFRAFA 123 +DP H TI F+ Sbjct: 276 SDPLHTTIIDTFS 288
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 73.2 bits (178), Expect = 3e-13 Identities = 50/101 (49%), Positives = 57/101 (56%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 +IL+G EG R A P TDPI YPGG FDPLG PE E Sbjct: 174 VILMGAVEGYRIAG--GPLGEVTDPI------------YPGGS-FDPLGLAE-DPEAFAE 217 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KEIKNGRLAM ++ G + QA TG GPI+NL HLADP Sbjct: 218 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 258
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 72.4 bits (176), Expect = 5e-13 Identities = 39/68 (57%), Positives = 45/68 (66%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 156 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 213 Query: 176 LFAHLADP 153 L H+ADP Sbjct: 214 LSDHIADP 221
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 72.4 bits (176), Expect = 5e-13 Identities = 39/68 (57%), Positives = 45/68 (66%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 183 GLDPLYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 240 Query: 176 LFAHLADP 153 L H+ADP Sbjct: 241 LADHIADP 248
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 72.0 bits (175), Expect = 7e-13 Identities = 42/80 (52%), Positives = 50/80 (62%) Frame = -3 Query: 362 LTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 183 L D YPGG FDPLG P+ EL+ KEIKNGRLAM + +G + QA TG GP+ Sbjct: 170 LDDLDTLYPGGP-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227 Query: 182 DNLFAHLADPGHATIFRAFA 123 NL HLADP T+ +AFA Sbjct: 228 QNLTDHLADP---TVNKAFA 244
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 71.6 bits (174), Expect = 9e-13 Identities = 37/68 (54%), Positives = 45/68 (66%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG P+ EL+ KE+KNGRLAM ++ G + QA TG GPI N Sbjct: 184 GLDPLYPGGA-FDPLGLAD-DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQN 241 Query: 176 LFAHLADP 153 L+ H+ADP Sbjct: 242 LYDHVADP 249
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 71.6 bits (174), Expect = 9e-13 Identities = 39/68 (57%), Positives = 45/68 (66%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D PGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 185 GLDPLLPGGA-FDPLGLAD-DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 242 Query: 176 LFAHLADP 153 L+ HLADP Sbjct: 243 LYDHLADP 250
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 71.6 bits (174), Expect = 9e-13 Identities = 39/68 (57%), Positives = 45/68 (66%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 69 GLDPLYPGDA-FDPLGLAD-DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 126 Query: 176 LFAHLADP 153 L+ HLADP Sbjct: 127 LYDHLADP 134
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/67 (56%), Positives = 45/67 (67%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + QA TG GP++NL Sbjct: 175 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 232 Query: 173 FAHLADP 153 HLADP Sbjct: 233 ADHLADP 239
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/67 (56%), Positives = 45/67 (67%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + QA TG GP++NL Sbjct: 126 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 183 Query: 173 FAHLADP 153 HLADP Sbjct: 184 ADHLADP 190
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 71.2 bits (173), Expect = 1e-12 Identities = 39/67 (58%), Positives = 45/67 (67%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + QA TG GPI+NL Sbjct: 198 TDPIYPGGN-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 255 Query: 173 FAHLADP 153 HLADP Sbjct: 256 ADHLADP 262
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 70.9 bits (172), Expect = 1e-12 Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 3/78 (3%) Frame = -3 Query: 377 FPNNKLTGTDVG---YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQA 207 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + QA Sbjct: 173 FRINGLPGVGEGNDLYPGGQYFDPLGLAD-DPTTFAELKVKEIKNGRLAMFSMFGFFVQA 231 Query: 206 EYTGTGPIDNLFAHLADP 153 TG GP++NL HL +P Sbjct: 232 IVTGKGPLENLLDHLDNP 249
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 70.9 bits (172), Expect = 1e-12 Identities = 41/76 (53%), Positives = 45/76 (59%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPG FDPLG P+ EL+ KEIKNGRLAM + G + QA TG GPI N Sbjct: 175 GLDPLYPGES-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQN 232 Query: 176 LFAHLADPGHATIFRA 129 L HLADPG F A Sbjct: 233 LADHLADPGTNNAFAA 248
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 70.5 bits (171), Expect = 2e-12 Identities = 42/80 (52%), Positives = 49/80 (61%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPG FDPLG P+ EL+ KEIKNGRLAM A +G + QA TG GPI+N Sbjct: 193 GLDPLYPGEA-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIEN 250 Query: 176 LFAHLADPGHATIFRAFAPK 117 L HLA+P F A+A K Sbjct: 251 LTDHLANPAENNAF-AYATK 269
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 70.5 bits (171), Expect = 2e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 189 YPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 70.5 bits (171), Expect = 2e-12 Identities = 46/101 (45%), Positives = 57/101 (56%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 ++L+G EG R A +P DP+ YPGG FDPLG PE E Sbjct: 166 VVLMGAVEGYRVAG--EPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAE 209 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KEIKNGRLAM ++ G + QA TG GP++NL HLADP Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADP 250
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/67 (56%), Positives = 45/67 (67%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + QA TG GP++NL Sbjct: 188 TDPIYPGGS-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245 Query: 173 FAHLADP 153 HLADP Sbjct: 246 NDHLADP 252
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 70.5 bits (171), Expect = 2e-12 Identities = 41/85 (48%), Positives = 48/85 (56%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 191 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248 Query: 161 ADPGHATIFRAFAPK*GTRWELATN 87 ADP + W ATN Sbjct: 249 ADPVN-----------NNAWNFATN 262
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 70.5 bits (171), Expect = 2e-12 Identities = 46/101 (45%), Positives = 57/101 (56%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 ++L+G EG R A +P DP+ YPGG FDPLG PE E Sbjct: 167 VVLMGAVEGYRVAG--EPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAE 210 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KEIKNGRLAM ++ G + QA TG GP++NL HLADP Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 40 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 97 Query: 161 ADP 153 ADP Sbjct: 98 ADP 100
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 70.1 bits (170), Expect = 3e-12 Identities = 38/68 (55%), Positives = 44/68 (64%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GPI+N Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 241 Query: 176 LFAHLADP 153 L H+ DP Sbjct: 242 LSDHINDP 249
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + QA TG GPI+NL HL Sbjct: 189 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 190 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 247 Query: 161 ADP 153 ADP Sbjct: 248 ADP 250
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 190 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 247 Query: 161 ADP 153 ADP Sbjct: 248 ADP 250
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 185 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 242 Query: 161 ADP 153 ADP Sbjct: 243 ADP 245
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 191 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 191 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 69.7 bits (169), Expect = 3e-12 Identities = 36/63 (57%), Positives = 44/63 (69%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE+ EL+ KE+KNGRLAM ++ G + QA TG GP++NL HL Sbjct: 188 YPGGS-FDPLGLAE-DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245 Query: 161 ADP 153 ADP Sbjct: 246 ADP 248
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 69.3 bits (168), Expect = 4e-12 Identities = 38/66 (57%), Positives = 45/66 (68%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLF 171 D+ YPGG FDPL T PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL Sbjct: 45 DLLYPGGS-FDPLASLT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 102 Query: 170 AHLADP 153 HLADP Sbjct: 103 DHLADP 108
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 69.3 bits (168), Expect = 4e-12 Identities = 37/63 (58%), Positives = 42/63 (66%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 190 YPGGS-FDPLGLAD-DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 247 Query: 161 ADP 153 ADP Sbjct: 248 ADP 250
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 69.3 bits (168), Expect = 4e-12 Identities = 36/63 (57%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + QA TG GP++NL HL Sbjct: 193 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 250 Query: 161 ADP 153 ADP Sbjct: 251 ADP 253
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 69.3 bits (168), Expect = 4e-12 Identities = 36/63 (57%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL H+ Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHI 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 69.3 bits (168), Expect = 4e-12 Identities = 36/63 (57%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL H+ Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHI 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 68.9 bits (167), Expect = 6e-12 Identities = 35/73 (47%), Positives = 46/73 (63%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG +FDPLG + P K +L+ EIK+ RLAM+ +G QA TG GP++N HL Sbjct: 214 YPGGKFFDPLGLAS-DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 272 Query: 161 ADPGHATIFRAFA 123 +DP H TI F+ Sbjct: 273 SDPLHTTIIDTFS 285
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 68.9 bits (167), Expect = 6e-12 Identities = 37/63 (58%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 Y GG FDPLG G PE+ EL+ KEIKNGRLAM ++ G + QA TG GPI+NL HL Sbjct: 188 YLGGS-FDPLGLGD-DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL 245 Query: 161 ADP 153 DP Sbjct: 246 TDP 248
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 68.9 bits (167), Expect = 6e-12 Identities = 47/101 (46%), Positives = 56/101 (55%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 +IL+G EG R A P TDPI YPGG FDPLG PE E Sbjct: 163 VILMGAVEGYRIAG--GPLGEVTDPI------------YPGGS-FDPLGLAD-DPEAFAE 206 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KE+KNGRLAM ++ G + QA TG GP++NL HLA P Sbjct: 207 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGP 247
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 68.9 bits (167), Expect = 6e-12 Identities = 37/67 (55%), Positives = 45/67 (67%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPGG FDPLG P+ +++ KEIKNGRLAM ++ G + QA TG GPI+NL Sbjct: 198 TDPIYPGGN-FDPLGLAD-DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 255 Query: 173 FAHLADP 153 HLADP Sbjct: 256 ADHLADP 262
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 68.6 bits (166), Expect = 7e-12 Identities = 35/63 (55%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + QA TG GP++NL H+ Sbjct: 186 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHI 243 Query: 161 ADP 153 ADP Sbjct: 244 ADP 246
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 68.6 bits (166), Expect = 7e-12 Identities = 47/101 (46%), Positives = 56/101 (55%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 +IL+G EG R A P TDPI YPGG FDPL PE E Sbjct: 145 VILMGAVEGYRIAG--GPLGEVTDPI------------YPGGS-FDPLALAD-DPEAFAE 188 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KEIKNGRLAM ++ G + QA TG GP++NL HLA+P Sbjct: 189 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEP 229
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 68.2 bits (165), Expect = 1e-11 Identities = 35/63 (55%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + QA TG GP++NL HL Sbjct: 192 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 249 Query: 161 ADP 153 +DP Sbjct: 250 SDP 252
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/63 (57%), Positives = 42/63 (66%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ K IKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248 Query: 161 ADP 153 ADP Sbjct: 249 ADP 251
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 68.2 bits (165), Expect = 1e-11 Identities = 45/101 (44%), Positives = 55/101 (54%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 ++L+G EG R A P V DP+ YPGG FDPLG PE E Sbjct: 167 VLLMGAVEGYRVAG--GPLGVVVDPL------------YPGGS-FDPLGLAE-DPEAFAE 210 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 153 L+ KE KNGRLAM ++ G + QA TG GP++NL HL DP Sbjct: 211 LKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDP 251
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 67.4 bits (163), Expect = 2e-11 Identities = 38/72 (52%), Positives = 47/72 (65%) Frame = -3 Query: 368 NKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 189 N L D +PGG FDPLG PE+ L+ KEIKNGRLAM A++G + QA TG G Sbjct: 192 NGLDFEDKLHPGGP-FDPLGLAK-DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEG 249 Query: 188 PIDNLFAHLADP 153 P++NL HL+DP Sbjct: 250 PVENLAKHLSDP 261
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/63 (53%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE +++ KE+KNGRLAM ++ G + QA TG GP++NL HL Sbjct: 189 YPGGT-FDPLGLAD-DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 67.4 bits (163), Expect = 2e-11 Identities = 35/63 (55%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KE+K GRLAML++ G + QA TG GP++NL H+ Sbjct: 189 YPGGS-FDPLGLAD-DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHI 246 Query: 161 ADP 153 ADP Sbjct: 247 ADP 249
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 67.4 bits (163), Expect = 2e-11 Identities = 48/116 (41%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKE 276 ++L+G EG R A PG D D YPGG FDPLG P+ E Sbjct: 19 VLLMGAVEGYR-AGNTAPGQFGED----------LDRLYPGGP-FDPLGLAD-DPDTFPE 65 Query: 275 LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP----GHATIFRAFAP 120 L+ KEIKNGRLAM ++G + QA TG GP++N HL DP G + FAP Sbjct: 66 LKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 67.4 bits (163), Expect = 2e-11 Identities = 36/63 (57%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG + E EL+ KEIKNGRLAM ++ G + QA TG GP++NL HL Sbjct: 188 YPGGS-FDPLGLADDA-EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245 Query: 161 ADP 153 ADP Sbjct: 246 ADP 248
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 66.2 bits (160), Expect = 4e-11 Identities = 35/63 (55%), Positives = 42/63 (66%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + A TG GP++NL HL Sbjct: 152 YPGGS-FDPLGLAE-VPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHL 209 Query: 161 ADP 153 ADP Sbjct: 210 ADP 212
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 65.9 bits (159), Expect = 5e-11 Identities = 34/63 (53%), Positives = 43/63 (68%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + QA TG GP+++L H+ Sbjct: 190 YPGGS-FDPLGLAE-RPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHI 247 Query: 161 ADP 153 ADP Sbjct: 248 ADP 250
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 64.7 bits (156), Expect = 1e-10 Identities = 39/78 (50%), Positives = 47/78 (60%) Frame = -3 Query: 356 GTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 G D YPG FDPLG P+ EL+ KEIKNGRLA ++ G + QA TG GP+ N Sbjct: 172 GLDPLYPGES-FDPLGLAD-DPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQN 229 Query: 176 LFAHLADPGHATIFRAFA 123 L HLA+P T+ AFA Sbjct: 230 LDDHLANP---TVNNAFA 244
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 63.5 bits (153), Expect = 2e-10 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 15/98 (15%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPL----- 312 LIL+GW E +RW D P + + P +K TG + GYPGG +FDPL Sbjct: 148 LILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGT 206 Query: 311 ---GYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQA 207 G EKL+ L+ EIK+ RLAMLA++ +F+A Sbjct: 207 LNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEA 244 Score = 39.3 bits (90), Expect = 0.005 Identities = 32/96 (33%), Positives = 43/96 (44%) Frame = -3 Query: 437 AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEI 258 A + W ++ G DP + + L PG FDPLG G P LK R E+ Sbjct: 50 AAKKSWIPAVRGGGNLVDPEWLDGSL-------PGDYGFDPLGLGK-DPAFLKWYREAEL 101 Query: 257 KNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPG 150 +GR AM AV+G + ++G F ADPG Sbjct: 102 IHGRWAMAAVLGIFVGQAWSGI----PWFEAGADPG 133
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 60.1 bits (144), Expect = 3e-09 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 15/98 (15%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPL----- 312 L+L+GW E +RW D + D P +K TG + GYPGG +FDPL Sbjct: 148 LLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGT 206 Query: 311 ---GYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQA 207 G EKL+ L+ EIK+ RLAMLA++ +F+A Sbjct: 207 LNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEA 244 Score = 41.2 bits (95), Expect = 0.001 Identities = 33/96 (34%), Positives = 43/96 (44%) Frame = -3 Query: 437 AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEI 258 A + W +K G DP + + L PG FDPLG G P LK R E+ Sbjct: 50 APKKSWIPAVKSGGNLVDPEWLDGSL-------PGDFGFDPLGLGK-DPAFLKWYREAEL 101 Query: 257 KNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPG 150 +GR AM AV+G + ++G F ADPG Sbjct: 102 IHGRWAMAAVLGIFVGQAWSGI----PWFEAGADPG 133
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 60.1 bits (144), Expect = 3e-09 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 14/97 (14%) Frame = -3 Query: 455 LILIGWAEGRRWADIIKPGCVNTDPIFP------NNKLTGTDVGYPGGLWFDPLGY---- 306 L+L+GW E +RW D P + + P N + + GYPGG +FDPL Sbjct: 153 LLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTI 212 Query: 305 --GTGSPE--KLKELRTKEIKNGRLAMLAVMGAWFQA 207 G +P+ KL+ L+ EIK+ RLAMLA++ +F+A Sbjct: 213 SNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEA 249 Score = 44.3 bits (103), Expect = 1e-04 Identities = 36/101 (35%), Positives = 45/101 (44%) Frame = -3 Query: 437 AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEI 258 A + W +K G DP + + L PG FDPLG G P LK R E+ Sbjct: 55 APKKSWIPAVKGGGNFLDPEWLDGSL-------PGDFGFDPLGLGK-DPAFLKWYREAEL 106 Query: 257 KNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIF 135 +GR AMLAV+G + +TG F ADPG F Sbjct: 107 IHGRWAMLAVLGIFVGQAWTGI----PWFEAGADPGAVAPF 143
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 52.8 bits (125), Expect = 4e-07 Identities = 23/38 (60%), Positives = 30/38 (78%) Frame = -3 Query: 335 GGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMG 222 G L+FDPLG PE+L+EL+TKE+ NGRLAM+A+ G Sbjct: 181 GNLYFDPLGLKPEDPEELRELQTKELNNGRLAMIAIAG 218 Score = 31.2 bits (69), Expect = 1.3 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = -3 Query: 437 AEGRRWADI-----IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYG-TGSPEKLKE 276 AE RR A++ PGC G + G G+W DPL T + ++ Sbjct: 45 AESRRVAEVQAYLATLPGC-------------GVESGPFKGVW-DPLSLAATATVGDVRR 90 Query: 275 LRTKEIKNGRLAMLAVMG 222 R EI +GR+AMLA +G Sbjct: 91 WRESEITHGRVAMLAALG 108
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 52.8 bits (125), Expect = 4e-07 Identities = 33/83 (39%), Positives = 46/83 (55%) Frame = -3 Query: 422 WADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRL 243 W +++ G + N++L YPGG +FDPLG PEKL L+ EIK+ RL Sbjct: 194 WIEVLVVGYIEFQR---NSELDPEKRIYPGG-YFDPLGLAA-DPEKLDTLKLAEIKHSRL 248 Query: 242 AMLAVMGAWFQAEYTGTGPIDNL 174 AM+A + QA +TG GP+ L Sbjct: 249 AMVAFLIFALQAAFTGKGPVSFL 271
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 51.2 bits (121), Expect = 1e-06 Identities = 33/76 (43%), Positives = 39/76 (51%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLF 171 D YPG FDPL T + +EIKNGRLAM ++G FQ TG P+ NL Sbjct: 266 DRSYPG---FDPLKLTT-------DYTKREIKNGRLAMTGLLGLTFQYLATGESPLANLA 315 Query: 170 AHLADPGHATIFRAFA 123 AH A+P A I A Sbjct: 316 AHFANPVGANITTTLA 331 Score = 45.8 bits (107), Expect = 5e-05 Identities = 29/71 (40%), Positives = 34/71 (47%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLF 171 D YPG FDP T + + EIKNGRLAM+ + G Q T GP+ NL Sbjct: 77 DRSYPG---FDPCNLTT------EYTKAAEIKNGRLAMIGMFGLEVQNHVTAQGPVANLI 127 Query: 170 AHLADPGHATI 138 HL P A I Sbjct: 128 EHLRHPLAANI 138 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -3 Query: 293 PEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 189 P + +R E+ NGRLAMLA++G + E G G Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVY-PELLGNG 34
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 49.7 bits (117), Expect = 4e-06 Identities = 33/71 (46%), Positives = 37/71 (52%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLF 171 D YPG FDPL T R E+KNGRLA+ AV G Q TG P+ NL Sbjct: 294 DRSYPG---FDPLNLTTDYT------RAAEVKNGRLALTAVAGLTAQYLATGESPLANLS 344 Query: 170 AHLADPGHATI 138 AHLA+P A I Sbjct: 345 AHLANPIGANI 355 Score = 42.4 bits (98), Expect = 6e-04 Identities = 29/59 (49%), Positives = 32/59 (54%) Frame = -3 Query: 350 DVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 D YPG FDPL T E KE EIKNGRLAM + G Q+ TG PI+NL Sbjct: 479 DQSYPG---FDPLNLTT---EYTKEA---EIKNGRLAMNGMFGLEVQSHVTGKSPINNL 528 Score = 42.0 bits (97), Expect = 7e-04 Identities = 26/63 (41%), Positives = 32/63 (50%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL 162 YPG FDPL T ++ EIKNGRLA+ A++G Q G P+ NL HL Sbjct: 109 YPG---FDPLNLTTDYTKEA------EIKNGRLALTALLGFEVQRHVVGGSPLANLAEHL 159 Query: 161 ADP 153 P Sbjct: 160 QQP 162 Score = 38.5 bits (88), Expect = 0.008 Identities = 22/51 (43%), Positives = 29/51 (56%) Frame = -3 Query: 341 YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 189 Y G FDP G P+ + +R E+ +GRLAMLAV+GA +Y G G Sbjct: 19 YYGDRGFDPAGLAA-DPDTFERMRIAEVYHGRLAMLAVVGA-LVPDYLGKG 67 Score = 35.4 bits (80), Expect = 0.069 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = -3 Query: 377 FPNNKLTGTDVG-YPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVM-------- 225 FPN + G YP FDPL P+ +R E+ +GRLAML + Sbjct: 191 FPNAEPPALLTGEYPADRGFDPLNLAA-DPDVYARMRVAEVFHGRLAMLCTVGCIVPELL 249 Query: 224 --GAWFQA 207 GAWF+A Sbjct: 250 GKGAWFEA 257
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 46.6 bits (109), Expect = 3e-05 Identities = 32/89 (35%), Positives = 46/89 (51%) Frame = -3 Query: 422 WADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRL 243 W ++I G + N++ YPGG+ FDPL + E+ L+T EIK+ RL Sbjct: 188 WIEVILVGGAE---FYRNSETNPEKRCYPGGV-FDPLKLASEDEERAFRLKTAEIKHARL 243 Query: 242 AMLAVMGAWFQAEYTGTGPIDNLFAHLAD 156 AM++ G QA TG G + +L A AD Sbjct: 244 AMVSFFGYGVQALSTGEGALGSL-AKFAD 271
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 46.2 bits (108), Expect = 4e-05 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = -3 Query: 353 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 174 TD YPG FD LG + E EL+ KE+KNGRLAM ++ G + QA + ++NL Sbjct: 189 TDPLYPGS--FDSLGLAEDT-EAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENL 245 Query: 173 FAHL 162 HL Sbjct: 246 ADHL 249
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = -3 Query: 344 GY-PGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTG 195 GY PG L FDPLG P++ + ++ KE+ +GRLAM+A G Q +G Sbjct: 146 GYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSG 196 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Frame = -3 Query: 344 GYPGGL----WFDPLGYGTGSPE-KLKELRTKEIKNGRLAMLAVMGAWFQAEY 201 G PGG FDP G+ G + ++ LR E +GR+AMLA +G Q ++ Sbjct: 35 GLPGGANILGEFDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQEKF 87
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 44.3 bits (103), Expect = 1e-04 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = -3 Query: 377 FPNNKLTGTDVGYPGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEY 201 F N + VG+ FDPLG+ GS E K+L EIK+GR+AMLA MG + E Sbjct: 2 FENERGVADPVGF-----FDPLGFTADGSVENFKKLAQTEIKHGRVAMLATMG-YITQEI 55 Query: 200 TGTGP 186 TG P Sbjct: 56 TGKLP 60
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 39.7 bits (91), Expect = 0.004 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 12/80 (15%) Frame = -3 Query: 326 WFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQ---------AEYTGT--GPI 183 +FDPLG G EK LR E+K+GR++MLAV+G Q +Y+GT I Sbjct: 45 FFDPLGLVADGDQEKFDRLRYVELKHGRISMLAVVGYLVQENGIRLPGDIDYSGTSFASI 104 Query: 182 DNLFAHLADPGHATIFRAFA 123 N FA L+ A I + A Sbjct: 105 PNGFAALSTISTAGIAQIVA 124
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 39.3 bits (90), Expect = 0.005 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 12/80 (15%) Frame = -3 Query: 326 WFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQ---------AEYTGTG--PI 183 +FDPLG G EK LR EIK+GR++MLAV G Q +Y+GT I Sbjct: 45 FFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVAGYLVQENGIRLPGDIDYSGTSFESI 104 Query: 182 DNLFAHLADPGHATIFRAFA 123 N FA L A I + A Sbjct: 105 PNGFAALTTISGAGIAQIVA 124
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 39.3 bits (90), Expect = 0.005 Identities = 34/76 (44%), Positives = 39/76 (51%), Gaps = 13/76 (17%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQ---------AEYTGTG 189 P G W DPLG G+ EK LR EIK+GR+ MLAV G Q +Y+GT Sbjct: 42 PLGYW-DPLGLVADGNQEKFDRLRYVEIKHGRICMLAVAGYLTQEAGIRLPGDIDYSGTS 100 Query: 188 --PIDNLFAHL-ADPG 150 I N FA L A PG Sbjct: 101 FESIPNGFAALSAVPG 116
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 38.5 bits (88), Expect = 0.008 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = -3 Query: 326 WFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMG 222 +FDPLG G EK LR EIK+GR++MLAV+G Sbjct: 45 FFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVG 80
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 38.5 bits (88), Expect = 0.008 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = -3 Query: 326 WFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMG 222 +FDPLG G EK LR EIK+GR++MLAV+G Sbjct: 45 FFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVG 80
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 36.6 bits (83), Expect = 0.031 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 P G W DPLG E+ + LR E+K+GR+AMLA+ G Q G + N Sbjct: 50 PLGFW-DPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSN 103
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 36.6 bits (83), Expect = 0.031 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMG 222 P G W DPLG E+ LR EIK+GR+AMLAV+G Sbjct: 45 PIGFW-DPLGLVADADQERFDRLRYVEIKHGRIAMLAVVG 83
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 36.6 bits (83), Expect = 0.031 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 P G W DPLG E+ + LR E+K+GR+AMLA+ G Q G + N Sbjct: 15 PLGFW-DPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSN 68
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 36.6 bits (83), Expect = 0.031 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = -3 Query: 326 WFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMG 222 ++DPLG G EK LR EIK+GR++MLAV G Sbjct: 45 FYDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVAG 80
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 36.6 bits (83), Expect = 0.031 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 P G W DPLG E+ + LR E+K+GR+AMLA+ G Q G + N Sbjct: 44 PLGFW-DPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSN 97
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 33.9 bits (76), Expect = 0.20 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 P G W DPLG + + LR E+K+GR+AMLA+ G Q G + N Sbjct: 50 PLGFW-DPLGLLADADQDGFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSN 103
>FCPC_MACPY (Q40299) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 216 Score = 32.0 bits (71), Expect = 0.76 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 338 PGGLWFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDN 177 P G W DPLG + + LR E+K GR+AMLA+ G Q G + N Sbjct: 49 PLGFW-DPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSN 102
>RPGF1_HUMAN (Q13905) Rap guanine nucleotide exchange factor 1 (Guanine| nucleotide-releasing factor 2) (C3G protein) (CRK SH3-binding GNRP) Length = 1077 Score = 31.2 bits (69), Expect = 1.3 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Frame = +1 Query: 193 VPVYSAWNHAPMTASMARRPFLISLVRSSLSFSGEPVP*PSGSNHRP-----PGYPTSVP 357 +P +AWN +P+ S+ S F G P P G + +P PG T P Sbjct: 403 IPQQTAWNLSPLPESLGE---------SGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTP 453 Query: 358 VSLLLGKMGSVLTQ----PGLMMSAHRRPS 435 +L K S +Q G +S R PS Sbjct: 454 PALPEKKRRSAASQTADGSGCRVSYERHPS 483
>GATA6_RAT (P46153) Transcription factor GATA-6 (GATA-binding factor 6)| (DNA-binding protein GATA-GT2) Length = 441 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 196 PVYSAWNHAPMTASMARRPFLISLVRSSLSFSGEPVP*PSG 318 P YS + AP+T + PF ++ S S +G P+P P G Sbjct: 183 PTYSPYMGAPLTPAWPAGPFETPVLHSLQSRAGAPLPVPRG 223
>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2| Length = 1422 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +1 Query: 289 SGEPVP*PSGSNHRPPGYPTSVPVSLLLGKMGSVLTQPGLMM 414 SG P+ PS S P PTS PV + G GSV+ P ++M Sbjct: 463 SGSPISTPSPSPL--PRTPTSTPVHVKQGTAGSVINNPYVIM 502
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -3 Query: 326 WFDPLGY-GTGSPEKLKELRTKEIKNGRLAMLAVMG 222 +FDPLG E+ LR E+K+GR+A +A +G Sbjct: 44 FFDPLGMLADADQERFDRLRYVEVKHGRIAHVAFLG 79
>UDPE_NPVSL (Q88168) Ecdysteroid UDP-glucosyltransferase precursor (EC 2.4.1.-)| Length = 515 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 395 VNTDPIFPNNKLTGTDVGYPGGLWFDP 315 VNT P+F N+ ++V Y GG+ DP Sbjct: 252 VNTHPVFDTNRPVPSNVQYLGGIHIDP 278
>Y539_PYRAB (Q9V189) UPF0103 protein PYRAB05390| Length = 291 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -3 Query: 452 ILIGWAEGRRWADIIKPGCVNTDPIF-PNNKLTGTDVG-YPGGLWFDPLGYGTGSPEKLK 279 + G+ R + I + G T IF PN+ G+ + YP G W PLG E K Sbjct: 49 VFSGYTASRTYKAIYEDGLPETFVIFGPNHTGLGSPIAVYPEGDWVTPLGKVKIDSELAK 108 Query: 278 EL 273 E+ Sbjct: 109 EI 110
>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)| Length = 1157 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +1 Query: 274 SSLSFSGEPVP*PSGSNHRPPGYPTSVPVSLLLGKMGSVLTQPGLMMSAHRRPSAQPM 447 SSLS PV P+ ++ P P VP MG ++ PG H PS P+ Sbjct: 17 SSLSSESSPVSSPATNHSSPASTPKRVP-------MGPIIVPPG----GHSVPSTPPV 63
>CAF1A_YERPE (P26949) F1 capsule-anchoring protein precursor| Length = 833 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 193 VPVYSAWNHAPMTASMARRPFLISLVRSSLSFSGEPVP 306 VP Y WN AP+ +AR + ++R + S E VP Sbjct: 259 VPYYQ-WNFAPVVRGIARTQARVEVLRDGYTVSNELVP 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,340,529 Number of Sequences: 219361 Number of extensions: 996080 Number of successful extensions: 3220 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 3063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3201 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)