| Clone Name | rbaal27p24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ELF2_MOUSE (Q9JHC9) ETS-related transcription factor Elf-2 (E74-... | 29 | 3.5 | 2 | ELF2_HUMAN (Q15723) ETS-related transcription factor Elf-2 (E74-... | 28 | 4.5 | 3 | DNAJ_XANAC (Q8PMA9) Chaperone protein dnaJ | 28 | 7.7 | 4 | LOXL4_MOUSE (Q924C6) Lysyl oxidase homolog 4 precursor (EC 1.4.3... | 28 | 7.7 | 5 | LOXL4_BOVIN (Q8MJ24) Lysyl oxidase homolog 4 precursor (EC 1.4.3... | 28 | 7.7 |
|---|
>ELF2_MOUSE (Q9JHC9) ETS-related transcription factor Elf-2 (E74-like factor 2)| (New ETS-related factor) Length = 593 Score = 28.9 bits (63), Expect = 3.5 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +2 Query: 32 HXPVPSCLQHPRSLIKWHXIPCICTTGRILSRGRRHYL*STSVPYTKEPSQTTRVTLLES 211 H P+CL+ RS ++ PCI T I + R + T V + E S+ + + + Sbjct: 104 HMESPTCLRDSRSPVEVFVPPCISTPEFIHAAMRPDVITETVVEVSTEESEPMDASPIPT 163 Query: 212 SP 217 SP Sbjct: 164 SP 165
>ELF2_HUMAN (Q15723) ETS-related transcription factor Elf-2 (E74-like factor 2)| (New ETS-related factor) Length = 593 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +2 Query: 32 HXPVPSCLQHPRSLIKWHXIPCICTTGRILSRGRRHYL*STSVPYTKEPSQTTRVTLLES 211 H P+CL+ RS ++ PC+ T I + R + T V + E S+ + + + Sbjct: 104 HMESPTCLRDSRSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDTSPIPT 163 Query: 212 SP 217 SP Sbjct: 164 SP 165
>DNAJ_XANAC (Q8PMA9) Chaperone protein dnaJ| Length = 375 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Frame = +2 Query: 197 TLLESSPCHG----DSTYQNYMTCHG 262 TL+E +PCHG D + TCHG Sbjct: 140 TLIECAPCHGSGSEDGKVETCGTCHG 165
>LOXL4_MOUSE (Q924C6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 4) (Lysyl oxidase-related protein C) Length = 757 Score = 27.7 bits (60), Expect = 7.7 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 57 CRHDGTGIWAVNCHT 13 C++DG +W NCHT Sbjct: 720 CKYDGQRVWLHNCHT 734
>LOXL4_BOVIN (Q8MJ24) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 4) Length = 757 Score = 27.7 bits (60), Expect = 7.7 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 57 CRHDGTGIWAVNCHT 13 C++DG +W NCHT Sbjct: 720 CKYDGQRVWLHNCHT 734 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,803,793 Number of Sequences: 219361 Number of extensions: 856674 Number of successful extensions: 1588 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1558 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1588 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)