ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal28d06 |
|---|---|
| Clone Library Name | barley_pub |
>RS12_HORVU (Q9XHS0) 40S ribosomal protein S12| Length = 143 Score = 182 bits (463), Expect = 2e-46 Identities = 87/88 (98%), Positives = 87/88 (98%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 KH AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV Sbjct: 56 KHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 115 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 179 VGCSCIVVKDYGEESEGLNIVQQYVKSQ Sbjct: 116 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 143
>RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3| Length = 144 Score = 147 bits (370), Expect = 1e-35 Identities = 66/87 (75%), Positives = 80/87 (91%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K AQLCVLAEDC+QPDYVKLVKALCA+H++ L+TVPSAKTLGEWAGLCKID+EG ARKV Sbjct: 57 KRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKV 116 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKS 182 VGCSC+V+KD+GEE+ LNIV++++ S Sbjct: 117 VGCSCLVIKDFGEETTALNIVKKHLDS 143
>RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1| Length = 144 Score = 144 bits (363), Expect = 1e-34 Identities = 67/88 (76%), Positives = 78/88 (88%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K AQL VLAEDC+QPDYVKLVKALCA+H V L+TVPSAKTLGEWAGLCKID+EG ARKV Sbjct: 57 KRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKV 116 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 179 VGCSC+VVKD+GEE+ L+IV +++ SQ Sbjct: 117 VGCSCLVVKDFGEETTALSIVNKHIASQ 144
>RS12_ORENI (O13019) 40S ribosomal protein S12| Length = 131 Score = 127 bits (320), Expect = 9e-30 Identities = 56/88 (63%), Positives = 71/88 (80%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCVLA +CD+P YVKLV+ALCAEH ++L+ V K LGEW GLCKID EGK RKV Sbjct: 43 KRQAHLCVLAANCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 179 VGCSC+VVKDYG+ES+ +++++Y KS+ Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFKSK 130
>RS12_PIG (P46405) 40S ribosomal protein S12| Length = 131 Score = 126 bits (316), Expect = 3e-29 Identities = 55/86 (63%), Positives = 69/86 (80%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCVLA +CD+P YVKLV+ALCAEH ++L+ V K LGEW GLCKID EGK RKV Sbjct: 43 KRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 VGCSC+VVKDYG+ES+ +++++Y K Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_CHICK (P84175) 40S ribosomal protein S12| Length = 131 Score = 126 bits (316), Expect = 3e-29 Identities = 55/86 (63%), Positives = 69/86 (80%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCVLA +CD+P YVKLV+ALCAEH ++L+ V K LGEW GLCKID EGK RKV Sbjct: 43 KRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 VGCSC+VVKDYG+ES+ +++++Y K Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_XENLA (P47840) 40S ribosomal protein S12| Length = 131 Score = 122 bits (306), Expect = 4e-28 Identities = 54/86 (62%), Positives = 68/86 (79%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCVLA +CD+P YVKLV+ALCAE ++L+ V K LGEW GLCKID EGK RKV Sbjct: 43 KRQAHLCVLASNCDEPMYVKLVEALCAEPQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 VGCSC+VVKDYG+ES+ +++++Y K Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_RAT (P63324) 40S ribosomal protein S12| Length = 131 Score = 122 bits (306), Expect = 4e-28 Identities = 54/86 (62%), Positives = 68/86 (79%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCVLA +CD+P YVKLV+AL AEH ++L+ V K LGEW GLCKID EGK RKV Sbjct: 43 KRQAHLCVLASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 VGCSC+VVKDYG+ES+ +++++Y K Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_MOUSE (P63323) 40S ribosomal protein S12| Length = 131 Score = 122 bits (306), Expect = 4e-28 Identities = 54/86 (62%), Positives = 68/86 (79%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCVLA +CD+P YVKLV+AL AEH ++L+ V K LGEW GLCKID EGK RKV Sbjct: 43 KRQAHLCVLASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 VGCSC+VVKDYG+ES+ +++++Y K Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_HUMAN (P25398) 40S ribosomal protein S12| Length = 131 Score = 118 bits (295), Expect = 7e-27 Identities = 52/86 (60%), Positives = 66/86 (76%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LCV A +CD+P YVKLV+AL AEH ++L+ V K LGEW GLCKID EG RKV Sbjct: 43 KRQAHLCVQASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 102 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 VGCSC+VVKDYG+ES+ +++++Y K Sbjct: 103 VGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_CYAPA (Q9SMI3) 40S ribosomal protein S12| Length = 136 Score = 117 bits (292), Expect = 2e-26 Identities = 51/88 (57%), Positives = 67/88 (76%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 + AQLCVLA + ++P Y +LV+ALCAEH ++L+ VP K LGEW GLCKID EGKARKV Sbjct: 49 QRSAQLCVLAANVNEPAYTRLVEALCAEHGINLIKVPENKQLGEWVGLCKIDKEGKARKV 108 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 179 VGCSC V+ +GEESE ++ +Y+K + Sbjct: 109 VGCSCAVITKFGEESEARQVLMEYLKKR 136
>RS12_DROME (P80455) 40S ribosomal protein S12| Length = 139 Score = 110 bits (274), Expect = 2e-24 Identities = 49/86 (56%), Positives = 65/86 (75%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A LC+LAE D+P+Y KLV ALC EH + L+ V S K LGEW+GLCKID EGK RKV Sbjct: 51 KRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKV 110 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVK 185 GCS +V+KD+GEE+ L++V+ +++ Sbjct: 111 CGCSVVVIKDFGEETPALDVVKDHLR 136
>RS12_CAEEL (P49196) 40S ribosomal protein S12| Length = 140 Score = 106 bits (264), Expect = 3e-23 Identities = 49/88 (55%), Positives = 61/88 (69%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A CVLAE+CD+P YVKLV+ LCAEH + L+ V K +GE+ GLCK D EGKARKV Sbjct: 52 KREAHFCVLAENCDEPQYVKLVETLCAEHQIPLIKVADKKIIGEYCGLCKYDKEGKARKV 111 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 179 VGCS VV ++G E +G I+ Y S+ Sbjct: 112 VGCSSAVVTNWGNEEQGRAILTDYFASK 139
>RS12A_SCHPO (O14062) 40S ribosomal protein S12-A| Length = 145 Score = 104 bits (260), Expect = 9e-23 Identities = 48/78 (61%), Positives = 55/78 (70%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 + A LCVL E CDQ YVKLV+ALCAE L+ V K LGEWAGLC +D +G ARKV Sbjct: 59 RRQAHLCVLCESCDQEAYVKLVEALCAESETPLIKVADPKVLGEWAGLCVLDRDGNARKV 118 Query: 262 VGCSCIVVKDYGEESEGL 209 VGCSC+ V DYGE+S L Sbjct: 119 VGCSCVAVTDYGEDSAAL 136
>RS12B_SCHPO (O74322) 40S ribosomal protein S12-B| Length = 148 Score = 104 bits (259), Expect = 1e-22 Identities = 49/78 (62%), Positives = 55/78 (70%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 + A LCVL E CDQ YVKLV+ALCAE LV V K LGEWAGLC +D +G ARKV Sbjct: 62 RRQAHLCVLCESCDQEAYVKLVEALCAESQTPLVKVADPKILGEWAGLCVLDRDGNARKV 121 Query: 262 VGCSCIVVKDYGEESEGL 209 VGCSC+ V DYGE+S L Sbjct: 122 VGCSCVAVTDYGEDSVAL 139
>RS12_ERYGR (O59936) 40S ribosomal protein S12| Length = 132 Score = 102 bits (255), Expect = 3e-22 Identities = 45/88 (51%), Positives = 62/88 (70%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 + A +CVL E C++ Y KL+ ALC+EH + L+ VP K LGEWAGLC +D EG ARKV Sbjct: 44 RREAHMCVLNEACEEEAYKKLIVALCSEHKIPLIKVPDGKQLGEWAGLCVLDREGNARKV 103 Query: 262 VGCSCIVVKDYGEESEGLNIVQQYVKSQ 179 V CSC+VVK++GEES ++ Y +++ Sbjct: 104 VNCSCVVVKNWGEESSERMMLLNYFQTE 131
>RS12_TRYBB (Q03253) 40S ribosomal protein S12| Length = 143 Score = 81.3 bits (199), Expect = 1e-15 Identities = 33/79 (41%), Positives = 54/79 (68%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 + A LCVLA+DC+ +Y KLV AL ++N+ LV++ + L +WAGL ++ +G RK Sbjct: 58 RRTAHLCVLADDCEDEEYKKLVTALAKQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKT 117 Query: 262 VGCSCIVVKDYGEESEGLN 206 + CSC+ V+D+GE ++ L+ Sbjct: 118 LKCSCLAVRDFGERTKALD 136
>RS12_PLAF7 (O97249) 40S ribosomal protein S12| Length = 141 Score = 79.3 bits (194), Expect = 4e-15 Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPS-AKTLGEWAGLCKIDTEGKARKVVG 257 A++C L++ C +P Y KL+ LCAE N+ L V + +K LG WAGL K+D EG ARK++G Sbjct: 54 AKVCFLSDVCSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIG 113 Query: 256 CSCIVVKDYGEES 218 S + V D+GE+S Sbjct: 114 ASSVAVVDFGEDS 126
>RS12_YEAST (P48589) 40S ribosomal protein S12| Length = 143 Score = 75.5 bits (184), Expect = 6e-14 Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 2/87 (2%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALC--AEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVV 260 A L VL + + +KLV+ L E+ V L+ V AK LGEWAGL KID EG ARKVV Sbjct: 57 ALLVVLVSSVTEANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARKVV 116 Query: 259 GCSCIVVKDYGEESEGLNIVQQYVKSQ 179 G S +VVK++G E++ L+++ ++ Q Sbjct: 117 GASVVVVKNWGAETDELSMIMEHFSQQ 143
>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae| Length = 127 Score = 42.7 bits (99), Expect = 4e-04 Identities = 22/45 (48%), Positives = 28/45 (62%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L V+AED D P+ V + LC E + V VPS K LGE AG+ Sbjct: 48 AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGI 92
>RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae| Length = 123 Score = 41.6 bits (96), Expect = 9e-04 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CKIDTEGKA 272 A+L ++AED D + V + LC E + V VPS K LG AGL I GKA Sbjct: 48 AKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGAAAGLEVPAASVAIIEPGKA 107 Query: 271 RKVVGCSCIVVKD 233 R++V + VK+ Sbjct: 108 RELVEDIAMKVKE 120
>RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae| Length = 123 Score = 39.3 bits (90), Expect = 0.004 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CKIDTEGKA 272 A+L ++AED D + V + LC E + + VPS K LG AG+ I GKA Sbjct: 48 AKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKA 107 Query: 271 RKVVGCSCIVVKD 233 R +V + VK+ Sbjct: 108 RDLVEEIAMKVKE 120
>RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae| Length = 151 Score = 39.3 bits (90), Expect = 0.004 Identities = 20/45 (44%), Positives = 28/45 (62%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L ++AED D P+ V + LC E V V VPS + LG+ AG+ Sbjct: 63 AKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGI 107
>RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae| Length = 123 Score = 38.5 bits (88), Expect = 0.007 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CKIDTEGKA 272 A+L ++AED D + V + LC E + + VPS K LG AG+ I GKA Sbjct: 48 AKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKA 107 Query: 271 RKVV 260 R +V Sbjct: 108 RDLV 111
>RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae| Length = 123 Score = 38.5 bits (88), Expect = 0.007 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CKIDTEGKA 272 A+L ++AED D + V + LC E + + VPS K LG AG+ I GKA Sbjct: 48 AKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKA 107 Query: 271 RKVV 260 R +V Sbjct: 108 RDLV 111
>RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae| Length = 119 Score = 38.5 bits (88), Expect = 0.007 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CKIDTEGKA 272 A+L +AED D P+ V + LC E NV + V S LG G+ I EG+ Sbjct: 44 AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAIINEGEL 103 Query: 271 RKVVG 257 RK +G Sbjct: 104 RKELG 108
>RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae| Length = 125 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/45 (42%), Positives = 29/45 (64%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L ++AE+ + P+ V + ALC E V V VPS + LG+ AG+ Sbjct: 49 AKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKAAGI 93
>RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae| Length = 126 Score = 37.7 bits (86), Expect = 0.013 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L V+AED + V + LC E + V VPS K+LGE GL Sbjct: 48 AKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGL 92
>RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae| Length = 126 Score = 35.0 bits (79), Expect = 0.083 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L V+A D + V + LC E + V VPS K LGE GL Sbjct: 48 AKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGL 92
>RL7A_SULSO (P55858) 50S ribosomal protein L7Ae| Length = 127 Score = 33.5 bits (75), Expect = 0.24 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L ++AED + V + LC E + V V S K LGE GL Sbjct: 48 AKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae| Length = 123 Score = 33.1 bits (74), Expect = 0.31 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 + A L ++AED D + V + LC E + V VPS LG AG+ Sbjct: 45 REEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDELGAAAGI 92
>NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP| protein NHP2) (High mobility group-like nuclear protein 2) Length = 156 Score = 32.7 bits (73), Expect = 0.41 Identities = 22/82 (26%), Positives = 37/82 (45%) Frame = -1 Query: 427 LCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGCSC 248 L V+A D D + + LC +H+V + +PS + LG AG K T Sbjct: 74 LVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGA-AGATKRPTS---------VV 123 Query: 247 IVVKDYGEESEGLNIVQQYVKS 182 +V ++ +G N ++Y +S Sbjct: 124 FIVPGSNKKKDGKNKEEEYKES 145
>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae| Length = 121 Score = 32.0 bits (71), Expect = 0.70 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGC 254 ++L V+AED + P+ V + +LC + V V V LG G + Sbjct: 47 SKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVG------------IASA 94 Query: 253 SCIVVKDYGEESE 215 + + + DYG+ E Sbjct: 95 ASVSIVDYGKNEE 107
>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae| Length = 121 Score = 32.0 bits (71), Expect = 0.70 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGC 254 ++L V+AED + P+ V + +LC + V V V LG G + Sbjct: 47 SKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVG------------IASA 94 Query: 253 SCIVVKDYGEESE 215 + + + DYG+ E Sbjct: 95 ASVSIVDYGKNEE 107
>RXL7_CLOAB (Q97EH1) Putative ribosomal protein L7Ae-like| Length = 79 Score = 32.0 bits (71), Expect = 0.70 Identities = 19/58 (32%), Positives = 32/58 (55%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVV 260 AQ+ +A+D + + + V+ L EH++ +V V + K LG+ LC ID E V+ Sbjct: 25 AQMVYIAKDAES-ELFQTVEKLANEHSLQIVYVDTMKELGK---LCNIDVEASTAVVL 78
>RL7A_METTH (O26355) 50S ribosomal protein L7Ae| Length = 123 Score = 31.6 bits (70), Expect = 0.91 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGC 254 AQL ++AED + + V + L E + + +P+ LG AGL + T A G Sbjct: 48 AQLVLIAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDELGAAAGL-NVGTASSAIVEAGD 106 Query: 253 SCIVVKDYGEESEGL 209 + ++K+ E+ E L Sbjct: 107 AEDLIKEIIEKVEEL 121
>SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein| Length = 126 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCK 293 ++ ++A DC+ + + + LC + NV V VPS LG G+ + Sbjct: 49 SEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSR 95
>ANM1_MOUSE (Q9JIF0) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| Length = 371 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -1 Query: 358 HNVHLVTVPSAKTLGEWAG-LCKIDTEGKARKVVGCSCIVVKDY 230 HN HL +G G LC + ARKV+G C + DY Sbjct: 82 HNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDY 125
>ANM1_RAT (Q63009) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| Length = 353 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -1 Query: 358 HNVHLVTVPSAKTLGEWAG-LCKIDTEGKARKVVGCSCIVVKDY 230 HN HL +G G LC + ARKV+G C + DY Sbjct: 64 HNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDY 107
>Y080_PYRFU (Q8U4K5) UPF0100 protein PF0080| Length = 345 Score = 29.6 bits (65), Expect = 3.5 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = -1 Query: 394 DYVKLVKALCAEHNVHLVTVPSAKTLGEWA 305 DY+ + K++ +HN+ +T+PS LG+++ Sbjct: 231 DYIFIYKSVAKQHNLSYITLPSEINLGDFS 260
>NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)| Length = 127 Score = 29.6 bits (65), Expect = 3.5 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGC 254 A + VLA D + + + + LC + NV V V S + LG G+ +R +V C Sbjct: 50 ADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGV--------SRPIVAC 101 Query: 253 SCIVVKDYGEESEGLNIVQQYVK 185 S + + + + +QQ ++ Sbjct: 102 S-VTTNEGSQLKSQITSIQQEIE 123
>RL7A_METJA (P54066) 50S ribosomal protein L7Ae| Length = 117 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 433 AQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 299 A+L ++AED + V + LC E + V S + LG+ AGL Sbjct: 43 AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAGL 87
>ANM1_HUMAN (Q99873) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| (Interferon receptor 1-bound protein 4) Length = 361 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -1 Query: 358 HNVHLVTVPSAKTLGEWAG-LCKIDTEGKARKVVGCSCIVVKDY 230 HN HL +G G LC + ARKV+G C + DY Sbjct: 72 HNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIVCSSISDY 115
>T4BB_BACCO (Q07606) Restriction enzyme BgcI beta subunit (EC 3.1.21.-)| (S.BcgI) Length = 341 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +2 Query: 224 FTIVLDNNARAAYN--LPCLALSVDLAKPCPLSESFSTWHSNQVNIVLSA*CLNKLHVIR 397 F ++D Y+ LP + + + +KP + F + +VNI + LN+ H++ Sbjct: 48 FEFMIDGEKEKLYSGKLPVITIGNETSKP--FVQEFHFFTGTKVNICIPKLDLNRNHLLY 105 Query: 398 LVTILSQHTKL 430 + T++ TK+ Sbjct: 106 ITTMIENATKM 116
>FZD10_MOUSE (Q8BKG4) Frizzled 10 precursor (Frizzled-10) (Fz-10)| Length = 582 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -2 Query: 141 AFWSLV*LCFCSWAYTVTSFKCEPSRY 61 A WS+ LCF S A+TV +F +PSR+ Sbjct: 233 AIWSV--LCFFSSAFTVLTFLIDPSRF 257
>NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex subunit 2-like| protein Length = 163 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 314 K+ +C+LA + D + A+C E + V +PS + LG Sbjct: 82 KNEKGICILAGNVSPIDVYSHIPAICEEKEIPYVYIPSREQLG 124
>HYM1_YEAST (P32464) Protein HYM1| Length = 399 Score = 28.9 bits (63), Expect = 5.9 Identities = 27/94 (28%), Positives = 40/94 (42%) Frame = +2 Query: 161 MKHSQLLRLDILLHDVKALGFFTIVLDNNARAAYNLPCLALSVDLAKPCPLSESFSTWHS 340 +K+ QL R I+L D + FF N + + + A P +S+ F S Sbjct: 169 IKYEQLCR--IILKDPQLWKFFEFAKLGNFEISTESLQILSAAFTAHPKLVSKEF---FS 223 Query: 341 NQVNIVLSA*CLNKLHVIRLVTILSQHTKLSXML 442 N++NI+ C+NKL Q TKL L Sbjct: 224 NEINIIRFIKCINKLMAHGSYVTKRQSTKLLASL 257
>FZD9_HUMAN (O00144) Frizzled 9 precursor (Frizzled-9) (Fz-9) (hFz9) (FzE6)| Length = 591 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -2 Query: 150 LCW-AFWSLV*LCFCSWAYTVTSFKCEPSRY 61 L W A WS LCF S A+TV +F EP R+ Sbjct: 232 LVWMAVWSA--LCFFSTAFTVLTFLLEPHRF 260
>YGK9_YEAST (P53138) Hypothetical 12.4 kDa protein in TAF60-MLC1 intergenic| region Length = 107 Score = 28.9 bits (63), Expect = 5.9 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +2 Query: 296 AKPCPLSESFSTWHSNQVNIVLS 364 ++P PLSES+ TWH+ ++ L+ Sbjct: 61 SRPLPLSESYETWHALELAFCLT 83
>FZ10B_XENLA (Q9W742) Frizzled 10-B precursor (Frizzled-10B) (Fz-10B) (Xfz10B)| (Frizzled 9) (Xfz9) Length = 580 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 141 AFWSLV*LCFCSWAYTVTSFKCEPSRY 61 A WSL LCF S A+TV +F +P R+ Sbjct: 231 AIWSL--LCFFSSAFTVLTFLVDPLRF 255
>RL7A_METMP (P62426) 50S ribosomal protein L7Ae| Length = 117 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/78 (29%), Positives = 37/78 (47%) Frame = -1 Query: 442 KHXAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKV 263 K A+L V+A+D + V + +C E + + + LG+ AGL ++ T A Sbjct: 40 KGIAKLVVIAQDVQPEEIVAHIPVICDEKGIAYSYSSTKEALGKAAGL-EVPTSAIAVVA 98 Query: 262 VGCSCIVVKDYGEESEGL 209 G S +KD E+ GL Sbjct: 99 EG-SADELKDLVEKLNGL 115
>FZD10_CHICK (Q9PWH2) Frizzled 10 precursor (Frizzled-10) (Fz-10) (cFz-10)| Length = 585 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 141 AFWSLV*LCFCSWAYTVTSFKCEPSRY 61 A WS+ LCF S A+TV +F +P R+ Sbjct: 236 AIWSI--LCFFSSAFTVLTFLIDPQRF 260
>FZD9_MOUSE (Q9R216) Frizzled 9 precursor (Frizzled-9) (Fz-9) (mFz9) (mFz3)| Length = 592 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -2 Query: 150 LCW-AFWSLV*LCFCSWAYTVTSFKCEPSRY 61 L W A WS LCF S A+TV +F EP R+ Sbjct: 233 LVWMAVWSA--LCFFSTAFTVFTFLLEPHRF 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,727,906 Number of Sequences: 219361 Number of extensions: 1105748 Number of successful extensions: 3021 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 2952 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3018 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
