ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8a20 |
|---|---|
| Clone Library Name | barley_pub |
>HSP70_SOYBN (P26413) Heat shock 70 kDa protein| Length = 645 Score = 32.3 bits (72), Expect(2) = 0.003 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQ 210 EL G+CNPIIAKMYQ Sbjct: 603 ELEGICNPIIAKMYQ 617 Score = 25.8 bits (55), Expect(2) = 0.003 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = -1 Query: 163 LPAAVLGPKIEEVD 122 +PAA GPKIEEVD Sbjct: 632 MPAAGAGPKIEEVD 645
>HSP70_MAIZE (P11143) Heat shock 70 kDa protein| Length = 645 Score = 37.0 bits (84), Expect(2) = 0.004 Identities = 19/38 (50%), Positives = 21/38 (55%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGA 141 EL G+CNPIIAKMY D A SGG+GA Sbjct: 600 ELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGA 637 Score = 20.8 bits (42), Expect(2) = 0.004 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 638 GPKIEEVD 645
>HSP7E_SPIOL (P29357) Chloroplast envelope membrane 70 kDa heat shock-related| protein Length = 652 Score = 37.7 bits (86), Expect = 0.008 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPIIAKMYQ + P + GGAG + RLS Sbjct: 603 ELESICNPIIAKMYQGAGGDMGGGMEDEGPTSGGGAGPKIEECRLS 648
>HSP70_CHLRE (P25840) Heat shock 70 kDa protein| Length = 650 Score = 35.0 bits (79), Expect(2) = 0.015 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 EL GLCNPII ++YQ +P GAGA GG Sbjct: 603 ELEGLCNPIITRLYQ------GGAGAGGMPGGGAGAGAAPSGG 639 Score = 20.8 bits (42), Expect(2) = 0.015 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 643 GPKIEEVD 650
>HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1)| Length = 651 Score = 34.7 bits (78), Expect(2) = 0.019 Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXX----XXXXXXDVPAASGGAG 144 EL +CNPIIAKMYQ D P ASGGAG Sbjct: 604 ELESICNPIIAKMYQGAGGEAGGPGASGMDDDAPPASGGAG 644 Score = 20.8 bits (42), Expect(2) = 0.019 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 644 GPKIEEVD 651
>HSP7C_PETHY (P09189) Heat shock cognate 70 kDa protein| Length = 651 Score = 34.3 bits (77), Expect(2) = 0.024 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 EL +CNPIIAKMYQ P+ G AG+Q G Sbjct: 604 ELESICNPIIAKMYQGGAGGATMDEDG--PSVGGSAGSQTGAG 644 Score = 20.8 bits (42), Expect(2) = 0.024 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 644 GPKIEEVD 651
>HSP73_ARATH (O65719) Heat shock cognate 70 kDa protein 3 (Hsc70.3)| Length = 649 Score = 34.3 bits (77), Expect(2) = 0.024 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXX--XXXXXXXDVPAASGGAG 144 EL +CNPIIAKMYQ DVP ++GGAG Sbjct: 604 ELESICNPIIAKMYQGGEAGGPAAGGMDEDVPPSAGGAG 642 Score = 20.8 bits (42), Expect(2) = 0.024 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 642 GPKIEEVD 649
>HSP71_LYCES (P24629) Heat shock cognate 70 kDa protein 1| Length = 650 Score = 33.5 bits (75), Expect(2) = 0.040 Identities = 19/38 (50%), Positives = 21/38 (55%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGA 141 EL G+CNPIIAKMYQ D P SGG+ A Sbjct: 606 ELEGICNPIIAKMYQGAGGDAGVPMDDDAP-PSGGSSA 642 Score = 20.8 bits (42), Expect(2) = 0.040 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 643 GPKIEEVD 650
>HSP7D_DROME (P11147) Heat shock 70 kDa protein cognate 4 (Heat shock 70 kDa| protein 88E) Length = 651 Score = 35.0 bits (79), Expect = 0.051 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXX--XXXXXXXXDVPAASGGAGAQDRGG 126 EL G+CNPII K+YQ +P A+G AGA GG Sbjct: 598 ELEGVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGG 642
>HSP72_ARATH (P22954) Heat shock cognate 70 kDa protein 2 (Hsc70.2)| Length = 653 Score = 33.1 bits (74), Expect(2) = 0.052 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXX------XXXXXXXXDVPAASGGAG 144 EL +CNPIIAKMYQ + P ASGGAG Sbjct: 604 ELESVCNPIIAKMYQGGAGGEAGGPGASGMDEDEAPPASGGAG 646 Score = 20.8 bits (42), Expect(2) = 0.052 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 646 GPKIEEVD 653
>HSP70_LUPPO (P16121) Heat shock 70 kDa protein (Fragment)| Length = 257 Score = 34.3 bits (77), Expect = 0.087 Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQ--XXXXXXXXXXXXDVPAASGGAG 144 EL LCNPIIAKMYQ D P SGGAG Sbjct: 212 ELESLCNPIIAKMYQGVLAQMVLVLLIMADAPTGSGGAG 250
>HSP72_LYCES (P27322) Heat shock cognate 70 kDa protein 2| Length = 644 Score = 31.6 bits (70), Expect(2) = 0.14 Identities = 18/35 (51%), Positives = 18/35 (51%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGG 150 EL LCNPIIAKMYQ PA SGG Sbjct: 604 ELESLCNPIIAKMYQGAGGDMDDEG----PAPSGG 634 Score = 20.8 bits (42), Expect(2) = 0.14 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 637 GPKIEEVD 644
>HSP70_DAUCA (P26791) Heat shock 70 kDa protein| Length = 655 Score = 30.8 bits (68), Expect(2) = 0.23 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQ 210 EL GLCNPIIA++YQ Sbjct: 606 ELEGLCNPIIARLYQ 620 Score = 20.8 bits (42), Expect(2) = 0.23 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 145 GPKIEEVD 122 GPKIEEVD Sbjct: 648 GPKIEEVD 655
>HSP74_TRYBB (P11145) Heat shock 70 kDa protein 4 (HSP70)| Length = 661 Score = 26.9 bits (58), Expect(2) = 1.4 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQ 210 EL G+C PI++KMYQ Sbjct: 601 ELEGVCAPILSKMYQ 615 Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -1 Query: 157 AAVLGPKIEEVD 122 AA GPK+EEVD Sbjct: 650 AASSGPKVEEVD 661
>HSP70_CHICK (P08106) Heat shock 70 kDa protein (HSP70)| Length = 634 Score = 30.0 bits (66), Expect = 1.6 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 EL LCNPI+ K+YQ +GGAGA GG Sbjct: 601 ELEKLCNPIVTKLYQ----------------GAGGAGAGGSGG 627
>HSP7D_MANSE (Q9U639) Heat shock 70 kDa protein cognate 4 (Hsc 70-4)| Length = 652 Score = 30.0 bits (66), Expect = 1.6 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXX--XXXXXXXXDVPAASGGAGAQDRGG 126 EL G+CNPII K+YQ P + GAG GG Sbjct: 598 ELEGICNPIITKLYQGAGGMPGGMPGGMPGFPGGAPGAGGAAPGG 642
>HSP70_LEIAM (Q07437) Heat shock 70 kDa protein| Length = 652 Score = 30.0 bits (66), Expect = 1.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPI+ KMYQ +P S +GA+ GG S Sbjct: 601 ELENVCNPIMTKMYQ--SMGGGAGGMAGMPDMSSMSGARPAGGASS 644
>HSP7A_DROME (P29843) Heat shock 70 kDa protein cognate 1 (Heat shock 70 kDa| protein 70C) Length = 641 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAG 144 EL +C+PII ++YQ P A+GG+G Sbjct: 598 ELERICSPIITRLYQGAGMAPPPTAGGSNPGATGGSG 634
>HSP70_ECHGR (Q24789) Heat shock cognate 70 kDa protein (HSP70)| Length = 665 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQ 210 EL +CNPIIAKMYQ Sbjct: 600 ELESVCNPIIAKMYQ 614
>MAG29_DERFA (P39674) Allergen MAG29 (Fragment)| Length = 145 Score = 29.6 bits (65), Expect = 2.1 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 6/50 (12%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPA------ASGGAGAQDRGGR 123 EL +CNPII K+YQ P SGG A GG+ Sbjct: 87 ELESVCNPIITKLYQQAGGAGAGGMPGGFPGGFPGTDGSGGGAAGGDGGK 136
>PURA_ARATH (Q96529) Adenylosuccinate synthetase, chloroplast precursor (EC| 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) Length = 490 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 140 GPQHRRWQPAHHRPCLRACQHQHPGTS 220 GP HRR+ P HH +C + P S Sbjct: 18 GPYHRRYPPLHHPRSFVSCSAKRPAVS 44
>HSP7C_BRARE (Q90473) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 649 Score = 29.3 bits (64), Expect = 2.8 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 EL +CNPII K+YQ +P GAGA GG Sbjct: 598 ELEKVCNPIITKLYQ-SAGGMPGGMPEGMPGGFPGAGAAPGGG 639
>HSP7C_SAGOE (Q71U34) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) (Intracellular vitamin D-binding protein 1) Length = 646 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-----SAGGMPGGMPGGFPGGGAPPSGGASS 638
>HSP7C_RAT (P63018) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 646 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-----SAGGMPGGMPGGFPGGGAPPSGGASS 638
>HSP7C_PONPY (Q5NVM9) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 646 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-----SAGGMPGGMPGGFPGGGAPPSGGASS 638
>HSP7C_MOUSE (P63017) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 646 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-----SAGGMPGGMPGGFPGGGAPPSGGASS 638
>HSP7C_HUMAN (P11142) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 646 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-----SAGGMPGGMPGGFPGGGAPPSGGASS 638
>HSP7C_CRIGR (P19378) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 646 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-----SAGGMPGGMPGGFPGGGAPPSGGASS 638
>GLGB_DEBHA (Q6BXN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) Length = 711 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -2 Query: 189 RRHGR*CAG-CQRRCWGPRSRRSTKLVLFHSEKYTIRHLFRPWVPIISPGLKFCLIVRLV 13 RRHG C C+ ++ L E YT P+ P+I G+ ++RL+ Sbjct: 469 RRHGERCISYCESHDQALVGDKTIAFWLMDKEMYTNMSTLTPFTPVIDRGIALHKMIRLI 528 Query: 12 YLS 4 S Sbjct: 529 TFS 531
>HSP7C_BOVIN (P19120) Heat shock cognate 71 kDa protein (Heat shock 70 kDa| protein 8) Length = 650 Score = 28.5 bits (62), Expect = 4.8 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGGRLS 117 EL +CNPII K+YQ +P G GA GG S Sbjct: 598 ELEKVCNPIITKLYQ-SAGGMPGGMPGGMPGGFPGGGAPPSGGASS 642
>HSP71_SCHPO (Q10265) Probable heat shock protein ssa1| Length = 643 Score = 28.5 bits (62), Expect = 4.8 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRG 129 EL G+ NPI+AK+YQ A G G D G Sbjct: 595 ELEGVANPIMAKIYQAGGAPGGAPGGMPGGAPGGAPGGADNG 636
>SYI_FUSNN (Q8RH47) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 933 Score = 28.5 bits (62), Expect = 4.8 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = +2 Query: 41 NPGDMIGTQGRNKWRIVYFSL*KRTNLVDL-LDLGPQHRR----WQPAHHRPC 184 +P ++IG + K+ + L K TN++D+ D G HR W+ HRPC Sbjct: 509 SPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEVWE-GLHRPC 560
>HSP73_BOVIN (P34933) Heat shock 70 kDa protein 3| Length = 631 Score = 28.5 bits (62), Expect = 4.8 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGA 141 EL +CNPII+K+YQ P GG+GA Sbjct: 596 ELERVCNPIISKLYQGG------------PGGGGGSGA 621
>HSP7A_CAEEL (P09446) Heat shock 70 kDa protein A| Length = 640 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 +L GL NPII+K+YQ P A+ G A GG Sbjct: 599 DLEGLANPIISKLYQ--------SAGGAPPGAAPGGAAGGAGG 633
>HSP70_ONCMY (P08108) Heat shock cognate 70 kDa protein (HSP70)| Length = 651 Score = 28.1 bits (61), Expect = 6.2 Identities = 15/43 (34%), Positives = 17/43 (39%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 EL +CNPII K+YQ G GA GG Sbjct: 598 ELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGG 640
>HSP72_HUMAN (P54652) Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa| protein 2) Length = 639 Score = 27.7 bits (60), Expect = 8.1 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRGG 126 EL +CNPII+K+YQ SGG G+ GG Sbjct: 601 ELERVCNPIISKLYQGGPG-----------GGSGGGGSGASGG 632
>HSP70_BRUMA (P27541) Heat shock 70 kDa protein| Length = 644 Score = 27.7 bits (60), Expect = 8.1 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -3 Query: 254 ELXGLCNPIIAKMYQXXXXXXXXXXXXDVPAASGGAGAQDRG 129 EL +CNPII K+YQ +P + GAG+ G Sbjct: 597 ELESVCNPIITKLYQ-SAGGMPGGMPGGMPGGAPGAGSTGGG 637 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,449,790 Number of Sequences: 219361 Number of extensions: 636499 Number of successful extensions: 1729 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1729 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
