ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal27n13 |
|---|---|
| Clone Library Name | barley_pub |
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 47.4 bits (111), Expect = 1e-05 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 ST CGH+FC +C++ S++ CPTCR+K+ + Y Sbjct: 155 STECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 193
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 47.4 bits (111), Expect = 1e-05 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 ST CGH+FC +C++ S++ CPTCR+K+ + Y Sbjct: 155 STECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 193
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 47.4 bits (111), Expect = 1e-05 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 ST CGH+FC +C++ S++ CPTCR+K+ + Y Sbjct: 151 STECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 189
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 43.1 bits (100), Expect = 2e-04 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASI---QAXKKCPTCRRKL 165 N S T CGHIFC CI +++ A +KCP CRRK+ Sbjct: 215 NLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKV 250
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKK-CPTCRRKLTISNFPRXYXPMADN*N 114 N T C HIFC CI ++Q K CP CR LT S+ P D+ N Sbjct: 644 NIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSN 694
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 39.3 bits (90), Expect = 0.003 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -3 Query: 257 SSTXCGHIFCXKCIKASIQAXKKCPTCRRK 168 ++T CGH+FC +CI A + +CP CR K Sbjct: 284 TATPCGHLFCWECITAWCSSKAECPLCREK 313
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 39.3 bits (90), Expect = 0.003 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -3 Query: 257 SSTXCGHIFCXKCIKASIQAXKKCPTCRRK 168 ++T CGH+FC +CI A + +CP CR K Sbjct: 284 TATPCGHLFCWECITAWCSSKAECPLCREK 313
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 38.9 bits (89), Expect = 0.003 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 T CGH FC CI+ +Q KCP C LT S + + Sbjct: 45 TPCGHSFCSICIRKYLQKESKCPLCLSDLTESMLQKEF 82
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 38.5 bits (88), Expect = 0.005 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 CGH+FC KC+ ++ ++CP CR K+ Sbjct: 260 CGHVFCWKCVLDWVKERQECPLCRAKM 286
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 38.1 bits (87), Expect = 0.006 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTC 177 A T CGH FC KCI S++ +CP C Sbjct: 148 AYMTKCGHSFCYKCIHQSLEDNNRCPKC 175
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 38.1 bits (87), Expect = 0.006 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCR 174 N T C H FC CI+ + KCPTCR Sbjct: 39 NPVITSCSHTFCSLCIRRCLSTEGKCPTCR 68
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 38.1 bits (87), Expect = 0.006 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTC 177 A T CGH FC KCI S++ +CP C Sbjct: 146 AYMTKCGHSFCYKCIHQSLEDNNRCPKC 173
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 37.7 bits (86), Expect = 0.008 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKK--CPTCRRKLTISNFP 147 T CGH+FC CI SI+ K CP CR L P Sbjct: 49 TRCGHVFCRSCIATSIKNNNKWTCPYCRAYLPSEGVP 85
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 37.4 bits (85), Expect = 0.010 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRR 171 N + CGH+FC C K + A +KCPTC + Sbjct: 657 NMAIKTCGHVFCENCCKERLAARMRKCPTCNK 688
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 37.4 bits (85), Expect = 0.010 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISN-FP 147 +A T CGH FC CI ++ CP C LT SN FP Sbjct: 56 DAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFP 95
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 37.0 bits (84), Expect = 0.013 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRR 171 N + CGH+FC C K + A +KCPTC + Sbjct: 620 NTALKTCGHVFCDVCCKERLAARMRKCPTCNK 651
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 37.0 bits (84), Expect = 0.013 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQA-XKKCPTCRR 171 T CGH+FC KC + + A ++CP+C R Sbjct: 642 TVCGHVFCSKCTQERLAARLRRCPSCNR 669
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 37.0 bits (84), Expect = 0.013 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPR 144 CGH+F C+++ ++ CPTCR L I++ R Sbjct: 356 CGHLFHNSCLRSWLEQDTSCPTCRMSLNIADGSR 389
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 37.0 bits (84), Expect = 0.013 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRR 171 N + CGH+FC C K + A +KCPTC + Sbjct: 650 NMAIRTCGHVFCEDCCKERLAARMRKCPTCNK 681
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 37.0 bits (84), Expect = 0.013 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK-KCPTCRRKLTISNFP 147 T CGH+FC CI S++ K CP CR L P Sbjct: 49 TRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSEGVP 84
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 37.0 bits (84), Expect = 0.013 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK-KCPTCRRKLTISNFP 147 T CGH+FC CI S++ K CP CR L P Sbjct: 49 TRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSEGVP 84
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 36.6 bits (83), Expect = 0.017 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASI-QAXKKCPTCRR 171 N + CGH+FC +C+ I +KCPTC R Sbjct: 660 NTALKTCGHLFCNQCVDDRISNRMRKCPTCSR 691
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C++ +A +KCP C +F R Y Sbjct: 958 DAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVY 1000
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 36.6 bits (83), Expect = 0.017 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 CGH+F C+++ ++ CPTCR L I++ Sbjct: 356 CGHLFHNSCLRSWLEQDTSCPTCRMSLNIAD 386
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C++ +A +KCP C +F R Y Sbjct: 957 DAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIY 999
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C++ +A +KCP C +F R Y Sbjct: 957 DAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVY 999
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C++ +A +KCP C +F R Y Sbjct: 957 DAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIY 999
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C++ +A +KCP C +F R Y Sbjct: 957 DAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIY 999
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -3 Query: 257 SSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 ++T CGH+FC CI ++CP CR T S+ Y Sbjct: 338 TATPCGHVFCWSCIMEWCNEKQECPLCRTPNTHSSLVCLY 377
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 36.6 bits (83), Expect = 0.017 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 N T CGH FC CI+ + KCP C +L S Y Sbjct: 36 NPVLTPCGHTFCSLCIRGYLSNEPKCPLCLHELRESMLRSEY 77
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 36.6 bits (83), Expect = 0.017 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 257 SSTXCGHIFCXKCIKASIQAXKKCPTCR 174 ++T CGHIFC CI +CP CR Sbjct: 267 AATECGHIFCWSCINGWTSKKSECPLCR 294
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 36.2 bits (82), Expect = 0.023 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLT 162 C H FC KCI + CP CRR++T Sbjct: 169 CAHSFCQKCIDKWSDRHRSCPVCRRQVT 196
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 36.2 bits (82), Expect = 0.023 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCR 174 N T C H FC CI+ + KCP CR Sbjct: 39 NPVITSCSHTFCSLCIRRCLSTEGKCPACR 68
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 36.2 bits (82), Expect = 0.023 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C+K +KCP C ++F R Y Sbjct: 931 DAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIY 973
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 36.2 bits (82), Expect = 0.023 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTCRR 171 CGH+FC C K + A +KCPTC + Sbjct: 606 CGHVFCADCCKERLAARMRKCPTCNK 631
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 36.2 bits (82), Expect = 0.023 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C+K +KCP C ++F R Y Sbjct: 940 DAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIY 982
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 36.2 bits (82), Expect = 0.023 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A T C H+FC +C+K +KCP C ++F R Y Sbjct: 929 DAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIY 971
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 36.2 bits (82), Expect = 0.023 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCR 174 T C H FC CI+ + KCP CR Sbjct: 47 TSCNHTFCSLCIRRCLSVDSKCPLCR 72
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = -3 Query: 260 ASSTXCGHIFCXKCI-----KASIQAXKKCPTCRR 171 A ST C H+FC C+ KAS+ CP CR+ Sbjct: 22 AVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 35.4 bits (80), Expect = 0.039 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLT 162 +A T CGH FC CI ++ CP C + LT Sbjct: 61 DAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLT 94
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 35.4 bits (80), Expect = 0.039 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 T C H+F +CI +++ K CP CRR L Sbjct: 132 TTCYHVFHQECIDQWLESNKTCPVCRRNL 160
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 64 CLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -3 Query: 251 TXCGHIFCXKCIKASI-QAXKKCPTCRRKLTIS 156 T CGH FC CI+ + ++CPTC ++ IS Sbjct: 41 TGCGHTFCSLCIQRYLTNTSQRCPTCMQEQQIS 73
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 63 CLHRFCSDCIVTALRSGNKECPTCRKKL 90
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 35 CLHRFCSDCIVTALRSGNKECPTCRKKL 62
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 35.0 bits (79), Expect = 0.050 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H FC KCI + CP CR ++T +N Sbjct: 161 CAHSFCQKCIDKWSGQSRNCPVCRIQVTAAN 191
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 64 CLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 64 CLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 64 CLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 62 CLHRFCSDCIVTALRSGNKECPTCRKKL 89
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 35.0 bits (79), Expect = 0.050 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 64 CLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 35.0 bits (79), Expect = 0.050 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 T CGH FC CI+ + +CP C +L Sbjct: 45 TQCGHTFCSLCIREYLNKESRCPLCLAEL 73
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 35.0 bits (79), Expect = 0.050 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 T CGH FC KC++ +Q CP R++L Sbjct: 64 TPCGHTFCHKCLRNFLQEKDFCPLDRKRL 92
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 35.0 bits (79), Expect = 0.050 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 T CGH FC KC++ +Q CP R++L Sbjct: 63 TPCGHTFCYKCLRNFLQEKDFCPLDRKRL 91
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 34.7 bits (78), Expect = 0.066 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H FC KCI + CP CR ++T +N Sbjct: 169 CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 34.7 bits (78), Expect = 0.066 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H FC KCI + CP CR ++T +N Sbjct: 169 CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 34.7 bits (78), Expect = 0.066 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H FC KCI + CP CR ++T +N Sbjct: 169 CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 34.7 bits (78), Expect = 0.066 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H FC KCI + CP CR ++T +N Sbjct: 169 CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 34.7 bits (78), Expect = 0.066 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 67 CLHRFCADCIITALRSGNKECPTCRKKL 94
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 34.7 bits (78), Expect = 0.066 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 CGH +C CI++ + +KCP CR Sbjct: 23 CGHSYCRFCIESHLNINEKCPLCR 46
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 34.7 bits (78), Expect = 0.066 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMAD 123 T C H+F +CI ++ + CP CRR L P P D Sbjct: 127 TTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPENTKPTVD 169
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 34.7 bits (78), Expect = 0.066 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = -3 Query: 260 ASSTXCGHIFCXKCI-----KASIQAXKKCPTCRR 171 A ST CGH+FC C+ KAS CP CR+ Sbjct: 24 AVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 34.7 bits (78), Expect = 0.066 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 67 CLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 34.7 bits (78), Expect = 0.066 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 67 CLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 34.7 bits (78), Expect = 0.066 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 67 CLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 34.7 bits (78), Expect = 0.066 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAX-KKCPTCRRKL 165 C H FC CI ++++ K+CPTCR+KL Sbjct: 67 CLHRFCADCIITALRSGNKECPTCRKKL 94
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 34.3 bits (77), Expect = 0.086 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQA-XKKCPTCRR 171 T CGH+FC C + + A ++CPTC + Sbjct: 652 TVCGHVFCLGCTQERLAARLRRCPTCNK 679
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 34.3 bits (77), Expect = 0.086 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPR 144 T C H FC CI+ + CP C+ + SN R Sbjct: 49 TSCNHTFCSHCIREYLIVNSHCPLCKAEQFESNLKR 84
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 33.5 bits (75), Expect = 0.15 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 S C H+FC C+K + K+C CR+++ Sbjct: 50 SLPCKHVFCYLCVKGASWLGKRCALCRQEI 79
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 33.5 bits (75), Expect = 0.15 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 S C H+FC C+K + K+C CR+++ Sbjct: 49 SLPCKHVFCYLCVKGASWLGKRCALCRQEI 78
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 33.5 bits (75), Expect = 0.15 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRR 171 T C H FC C S Q KCP C++ Sbjct: 254 TKCKHYFCTGCALKSFQKSSKCPICQQ 280
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 33.5 bits (75), Expect = 0.15 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIK--ASIQAXK----KCPTCRRKLTIS 156 +A T C H+FC +C++ + Q K KCP CRR + ++ Sbjct: 909 SAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLN 950
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 33.5 bits (75), Expect = 0.15 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 S C H+FC C+K + K+C CR+++ Sbjct: 48 SLPCKHVFCYLCVKGASWLGKRCALCRQEI 77
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 33.5 bits (75), Expect = 0.15 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 S C H+FC C+K + K+C CR+++ Sbjct: 48 SLPCKHVFCYLCVKGASWLGKRCALCRQEI 77
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 33.5 bits (75), Expect = 0.15 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -3 Query: 257 SSTXCGHIFCXKCIKASIQAXKKCPTCRR 171 S CGH+FC C+ + + +CP CR+ Sbjct: 297 SCAPCGHLFCWSCLMSWCKERPECPLCRQ 325
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = -3 Query: 254 STXCGHIFCXKCI-KASIQAXKKCPTCRRKLTISN 153 S CGH FC +CI + CP CR++ + N Sbjct: 32 SIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRN 66
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 33.1 bits (74), Expect = 0.19 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTCRR 171 CGH+FC +C + + A +KCP C + Sbjct: 663 CGHVFCHQCAQDRLDARLRKCPNCNK 688
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 33.1 bits (74), Expect = 0.19 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPR 144 T C H +C +CI+ + +CP C+ ++ S R Sbjct: 42 TQCDHTYCSQCIREFLLRDNRCPLCKTEVFESGLKR 77
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKK--CPTCRRK 168 N ++ CGH FC C+ + KK CP CR K Sbjct: 43 NPTTLNCGHSFCRHCLALWWMSSKKTECPECREK 76
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKK--CPTCRRK 168 N ++ CGH FC C+ + KK CP CR K Sbjct: 43 NPTTLNCGHSFCRHCLALWWMSSKKTECPECREK 76
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 33.1 bits (74), Expect = 0.19 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T CGH FC CI+ + CP C Sbjct: 41 TPCGHTFCSLCIRTHLNNQPNCPLC 65
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 33.1 bits (74), Expect = 0.19 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRR 171 C H FC CI ++Q K CP C R Sbjct: 180 CRHSFCEGCITRALQVKKACPMCGR 204
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 33.1 bits (74), Expect = 0.19 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRR 171 C H FC CI ++Q K CP C R Sbjct: 180 CRHSFCEGCITRALQVKKACPMCGR 204
>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein| RHA3a) Length = 185 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLT 162 CGH F +CI + + CP+CRR LT Sbjct: 121 CGHSFHVECIDKWLVSRSSCPSCRRILT 148
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 32.7 bits (73), Expect = 0.25 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCR 174 T C H FC CI+ ++ CP CR Sbjct: 42 TSCSHTFCSFCIRDYLREHPMCPACR 67
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 32.7 bits (73), Expect = 0.25 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK---KCPTCRRKLTISN 153 T C H+FC CI IQ + KCP CR + N Sbjct: 773 THCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDN 808
>ATL3I_ARATH (Q7X843) RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion| protein) Length = 349 Score = 32.7 bits (73), Expect = 0.25 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H F CI + + CP CRR L+ SN Sbjct: 226 CSHAFHLHCIDTWLLSNSTCPLCRRSLSTSN 256
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 32.7 bits (73), Expect = 0.25 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Frame = -3 Query: 251 TXCGHIFCXKCIKASI---QAXKKCPTCRRKL 165 T C H+FC CI I Q KCP CR ++ Sbjct: 767 THCAHVFCKPCICQVIHSEQPHAKCPLCRNEI 798
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 32.7 bits (73), Expect = 0.25 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKK--CPTCRRK 168 N ++ CGH FC C+ + KK CP CR K Sbjct: 43 NPTTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 32.7 bits (73), Expect = 0.25 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Frame = -3 Query: 254 STXCGHIFCXKCIK---ASIQAXKK---CPTCRRKLTISN 153 S CGH FC CI SI+ KK CP CR SN Sbjct: 27 SADCGHTFCQGCITLYFESIKCDKKVFICPVCRISYQFSN 66
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 32.7 bits (73), Expect = 0.25 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK---KCPTCRRKL 165 T C H+FC CI IQ + KCP CR + Sbjct: 770 THCAHVFCKPCICQCIQNEQPHAKCPLCRNDI 801
>SAN1_YEAST (P22470) Protein SAN1| Length = 610 Score = 32.7 bits (73), Expect = 0.25 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTIS 156 CGHIF +CI + CP CR+K++ S Sbjct: 257 CGHIFGRECIYKWSRLENSCPLCRQKISES 286
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 32.7 bits (73), Expect = 0.25 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKA--SIQAXKKCPTCRRK 168 +A + CGH FC +C+ +Q CP C+ + Sbjct: 30 DAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKER 63
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 32.7 bits (73), Expect = 0.25 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 6/35 (17%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK------KCPTCRRKL 165 T CGH FC KC+ I+ KCP CR ++ Sbjct: 930 TECGHSFCEKCLFEYIEFQNSKNLGLKCPNCRNQI 964
>RN126_MOUSE (Q91YL2) RING finger protein 126| Length = 313 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H+F CI ++ CP CR+ LT N Sbjct: 249 CNHLFHDSCIVPWLEQHDSCPVCRKSLTGQN 279
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTI 159 T CGH FC +C S +KCP KLT+ Sbjct: 68 TTCGHTFCRRCALKS----EKCPVDNAKLTV 94
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 32.3 bits (72), Expect = 0.33 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 6/36 (16%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKK------CPTCRR 171 A ST CGH+FC C+ ++ CP CR+ Sbjct: 24 AVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCRK 59
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 32.3 bits (72), Expect = 0.33 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = -3 Query: 254 STXCGHIFCXKCI-KASIQAXKKCPTCRRKLTISN 153 S CGH FC +CI + CP CR++ + N Sbjct: 28 SIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKN 62
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 32.3 bits (72), Expect = 0.33 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASI-QAXKKCPTCRR 171 CGH+FC +C+ + +KCP+C + Sbjct: 670 CGHVFCNECVDNRLANRMRKCPSCNK 695
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 32.3 bits (72), Expect = 0.33 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 C H+FC CIK +KCP C ++F R + Sbjct: 800 CYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIF 836
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 32.3 bits (72), Expect = 0.33 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 C H+FC CIK +KCP C ++F R + Sbjct: 791 CYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIF 827
>ATL1F_ARATH (Q9LQM2) Putative RING-H2 finger protein ATL1F precursor| Length = 332 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 + C H F CI + K CP CRR+L + + Sbjct: 171 STCNHSFHTICIDLWFEGHKTCPVCRRELDVED 203
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H FC C+K +Q CP C KL Sbjct: 134 CMHRFCIPCMKTWMQLRNTCPLCNAKL 160
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1062 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPT-CRRKLT 162 +T CGH+FC C+ + CP+ CR +L+ Sbjct: 30 TTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLS 61
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ ++T Sbjct: 36 STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEIT 69
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 8/38 (21%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIK--------ASIQAXKKCPTCR 174 N S+ CGH+FC CI+ ++ + +CP CR Sbjct: 263 NPSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCR 300
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 31.6 bits (70), Expect = 0.56 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = -3 Query: 245 CGHIFCXKCIKA---SIQAXKKCPTCRRKLTISNFP 147 CGH +C C+ + + + +CP CR+ + S+ P Sbjct: 31 CGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSSP 66
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKLTI 159 T CGH FC +C S +KCP KLT+ Sbjct: 144 TTCGHTFCRRCALKS----EKCPVDNVKLTV 170
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXK-KCPTCRRKL 165 N T CGH FC C+ A + + KC C+ + Sbjct: 61 NPKQTECGHRFCESCMAALLSSSSPKCTACQESI 94
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T CGH FC KC I+ K C C Sbjct: 178 TNCGHYFCQKCFVNRIKIDKSCFIC 202
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ ++T Sbjct: 36 STQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEIT 69
>RN126_HUMAN (Q9BV68) RING finger protein 126| Length = 326 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H+F CI ++ CP CR+ LT N Sbjct: 247 CNHLFHDGCIVPWLEQHDSCPVCRKSLTGQN 277
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTCRR 171 CGH FC +CI+ I+ ++CP C R Sbjct: 643 CGHGFCYQCIQKRIETRQRRCPICGR 668
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 31.2 bits (69), Expect = 0.73 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPT-CRRKLT 162 +T CGH+FC C+ + CP CR +L+ Sbjct: 30 TTPCGHVFCAGCVLPWVVQEGSCPARCRGRLS 61
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 31.2 bits (69), Expect = 0.73 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H+F CI A ++A CP CR L Sbjct: 147 CDHVFHPHCIDAWLEAHVTCPVCRANL 173
>ZP2_MOUSE (P20239) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 713 Score = 31.2 bits (69), Expect = 0.73 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = -3 Query: 239 HIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMAD-N*NLXSXSWSIXAXGXXLKP 63 H FC I+A + CRR L +FP+ + +AD N N+ W + Sbjct: 131 HFFC-PAIQAETHEISEIVVCRRDLISFSFPQLFSRLADENQNVSEMGWIVKIGNGTRAH 189 Query: 62 IQPFLEHXXRG 30 I P + +G Sbjct: 190 ILPLKDAIVQG 200
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 31.2 bits (69), Expect = 0.73 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPT-CRRKLT 162 +T CGH+FC C+ + CP CR +L+ Sbjct: 30 TTPCGHVFCAGCVLPWVVQEGSCPARCRGRLS 61
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 31.2 bits (69), Expect = 0.73 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFPRXY 138 +A + C H+FC C++ + +KCP C +++ R Y Sbjct: 1000 DAVLSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGANDYHRLY 1042
>ATL5B_ARATH (Q9FLC6) Putative RING-H2 finger protein ATL5B precursor| Length = 176 Score = 31.2 bits (69), Expect = 0.73 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F KCI + + CPTCR+ L Sbjct: 132 CNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 31.2 bits (69), Expect = 0.73 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMADN 120 A + C H FC CI ++ +CP CR+ + + Y + DN Sbjct: 413 AVTLNCAHSFCSYCINEWMKRKIECPICRKDIK----SKTYSLVLDN 455
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 30.8 bits (68), Expect = 0.95 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 A + C H FC CI ++ +CP CR+ + Sbjct: 416 AVTLNCAHSFCSFCINEWMKRKVECPICRKDI 447
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 30.8 bits (68), Expect = 0.95 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 239 HIFCXKCIKASIQAXKKCPTCRRKLTISN 153 H+FC CI ++ +CP CR +T N Sbjct: 35 HVFCSICIDLWLKNNSQCPACRVPITPEN 63
>RFP2_HUMAN (O60858) Ret finger protein 2 (Leukemia-associated protein 5)| (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Putative tumor suppressor RFP2) (Tripartite motif protein 13) (RING finger protein 77) Length = 407 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 10/36 (27%) Frame = -3 Query: 245 CGHIFCXKCIKASIQ----------AXKKCPTCRRK 168 C H FC KC++ ++ A KCPTCR++ Sbjct: 25 CSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 30.8 bits (68), Expect = 0.95 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 239 HIFCXKCIKASIQAXKKCPTCRRKLTISN 153 H+FC CI ++ +CP CR +T N Sbjct: 35 HVFCSICIDLWLKNNSQCPACRVPITPEN 63
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 30.8 bits (68), Expect = 0.95 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 239 HIFCXKCIKASIQAXKKCPTCRRKLTISN 153 H+FC CI ++ +CP CR +T N Sbjct: 35 HVFCSICIDLWLKNNSQCPACRVPITPEN 63
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 30.8 bits (68), Expect = 0.95 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 6/32 (18%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKK------CPTCR 174 T CGH FC C+ IQ K CP CR Sbjct: 849 TRCGHPFCESCLLEYIQFQNKKGSETICPNCR 880
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 30.8 bits (68), Expect = 0.95 Identities = 9/28 (32%), Positives = 13/28 (46%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRK 168 T C H FC C ++ CP C ++ Sbjct: 184 TKCNHYFCSSCFMKQMKVSTNCPICGKE 211
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXK--KCPTCRRKLT 162 CGH FC CI S ++ CP C+ LT Sbjct: 177 CGHNFCKHCIDKSWESASAFSCPECKEVLT 206
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDIT 69
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = -3 Query: 245 CGHIFCXKCIKASI--QAXKKCPTCRRKLT 162 CGH FC CI + Q+ CP CR +T Sbjct: 160 CGHNFCRSCIDKAWEGQSSFACPECRESIT 189
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXK---KCPTCRRKLT 162 ST C HIFC C+ + K +CP C+ +T Sbjct: 36 STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = -3 Query: 245 CGHIFCXKCIKA---SIQAXKKCPTCRRKLTISNFP 147 CGH +C C+ + + + +CP CR+++ S+ P Sbjct: 31 CGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSSSSP 66
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI-SNFP 147 C H+F CI + + CP CR LT SN P Sbjct: 142 CNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKP 175
>PEX2_PICPA (Q01964) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal| protein PER6) Length = 461 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKK 189 N T CGHI+C CI + +Q K+ Sbjct: 308 NPYETTCGHIYCYVCILSKLQIFKE 332
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 30.4 bits (67), Expect = 1.2 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H FC C ++ CPTCR Sbjct: 319 CMHTFCAACYSGWMERSSLCPTCR 342
>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 30.4 bits (67), Expect = 1.2 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H FC C ++ CPTCR Sbjct: 320 CMHTFCAACYSGWMERSSLCPTCR 343
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQ-AXKKCP 183 A T CGH FC CI SI+ A KCP Sbjct: 80 AVQTPCGHRFCKACIIKSIRDAGHKCP 106
>ATL5H_ARATH (Q8LGA5) RING-H2 finger protein ATL5H precursor| Length = 368 Score = 30.4 bits (67), Expect = 1.2 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H+F CI A +Q CP CR L Sbjct: 143 CDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E| Length = 204 Score = 30.4 bits (67), Expect = 1.2 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI 159 C H F +CI + +Q+ CP CR+++ + Sbjct: 107 CDHWFHVECIDSWLQSNSTCPICRKRVCL 135
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 30.4 bits (67), Expect = 1.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRK 168 T CGH FC C ++ KC C ++ Sbjct: 212 TNCGHYFCGSCFAKDMKKGTKCFICHKE 239
>ATL4B_ARATH (Q9M0R6) Putative RING-H2 finger protein ATL4B precursor| Length = 302 Score = 30.4 bits (67), Expect = 1.2 Identities = 12/41 (29%), Positives = 17/41 (41%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMAD 123 C H F CI + + CP CR L++ P+ D Sbjct: 142 CSHTFHANCIDVWLSSQSTCPACRANLSLKPGESYPYPITD 182
>RHA4A_ARATH (Q84TF5) RING-H2 zinc finger protein RHA4a| Length = 174 Score = 30.4 bits (67), Expect = 1.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C HIF CI + + CP CR ++IS+ Sbjct: 124 CKHIFHLDCIHLWLYSHNTCPLCRSSVSISS 154
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 7/41 (17%) Frame = -3 Query: 254 STXCGHIFCXKCIKASI-------QAXKKCPTCRRKLTISN 153 S CGH FC CI A I + CP C+ + N Sbjct: 27 SLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQ-AXKKCP 183 A T CGH FC CI SI+ A KCP Sbjct: 80 AVQTPCGHRFCKACIIKSIRDAGHKCP 106
>ATL1R_ARATH (Q8LC69) RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8)| Length = 185 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTIS 156 CGH F CI + + CP+CR+ L ++ Sbjct: 123 CGHGFHVSCIDTWLGSHSSCPSCRQILVVT 152
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXK-KCPTCRR 171 C H FC CIK SIQ C CRR Sbjct: 20 CNHEFCYICIKGSIQNDMLNCAVCRR 45
>ATL3C_ARATH (Q9SG96) RING-H2 finger protein ATL3C| Length = 181 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI 159 C H F +CI + + CPTCR+ L + Sbjct: 133 CNHGFHVRCIDTWLLSRSSCPTCRQSLLL 161
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 30.4 bits (67), Expect = 1.2 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T CGH FC C ++ ++C C Sbjct: 171 TRCGHYFCGGCFARRVRETRQCAVC 195
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKK-CPTCRRKL 165 CGH+FC C++ ++ K C CR L Sbjct: 46 CGHVFCSACLQECLKPKKPVCGVCRSAL 73
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 10/36 (27%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXK----------KCPTCRRK 168 C H FC KC++ ++ KCPTCR++ Sbjct: 25 CSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE 60
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/41 (29%), Positives = 17/41 (41%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMAD 123 C H F CI + + CP CR L++ + P D Sbjct: 139 CSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPHPSMD 179
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T CGH FC C Q KC C Sbjct: 250 TKCGHYFCMGCAAKRFQKSPKCYAC 274
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 30.0 bits (66), Expect = 1.6 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 CGH+F CI ++ CP CR Sbjct: 132 CGHVFHVDCIDTWFRSRSSCPLCR 155
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKK-CPTCRRKL 165 CGH+FC C++ ++ K C CR L Sbjct: 45 CGHVFCSACLQECLKPKKPVCGVCRSAL 72
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKK-CPTCRRKL 165 CGH+FC C++ ++ K C CR L Sbjct: 45 CGHVFCSACLQECLKPKKPVCGVCRSAL 72
>YOUD_CAEEL (P30631) Hypothetical RING finger protein ZK637.14 in chromosome| III Length = 161 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F C+ ++A + CPTCR+K+ Sbjct: 111 CKHRFHYFCLTLWLEAQQTCPTCRQKV 137
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKK-CPTCRRKL 165 CGH+FC C++ ++ K C CR L Sbjct: 44 CGHVFCSACLQECLKPKKPVCGVCRSTL 71
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKK-CPTCRRKL 165 CGH+FC C++ ++ K C CR L Sbjct: 44 CGHVFCSACLQECLKPKKPVCGVCRSAL 71
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKK-CPTCRRKL 165 CGH+FC C++ ++ K C CR L Sbjct: 44 CGHVFCSACLQECLKPKKPVCGVCRSAL 71
>ATL1B_ARATH (Q9LM69) RING-H2 finger protein ATL1B| Length = 197 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTIS 156 CGH F CI + + CP+CR+ L ++ Sbjct: 130 CGHGFHVACIDTWLGSHSSCPSCRQILVVA 159
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI-SNFP 147 C H+F CI +Q CP CR +++ ++FP Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFP 190
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H FC CI+A +CP CR Sbjct: 35 CLHDFCFVCIRAWTSTSVQCPLCR 58
>R126B_XENLA (Q6IRP0) RING finger protein 126-B| Length = 312 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H+F CI ++ CP CR+ L+ N Sbjct: 246 CNHLFHNDCIIPWLEQHDTCPVCRKSLSGQN 276
>R126A_XENLA (Q7T0Q3) RING finger protein 126-A| Length = 312 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H+F CI ++ CP CR+ L+ N Sbjct: 246 CNHLFHNDCIIPWLEQHDTCPVCRKSLSGQN 276
>TRAF5_MOUSE (P70191) TNF receptor-associated factor 5| Length = 558 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTC 177 N T CGH FC +CI+ S++ P C Sbjct: 54 NPHQTGCGHRFCQQCIR-SLRELNSVPIC 81
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 29.6 bits (65), Expect = 2.1 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H +C CI+ + +CPTC Sbjct: 41 CSHNYCSLCIRKFLSYKTQCPTC 63
>RNF38_HUMAN (Q9H0F5) RING finger protein 38| Length = 515 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H F KC+ ++A + CP CR Sbjct: 481 CNHEFHAKCVDKWLKANRTCPICR 504
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 Query: 254 STXCGHIFCXKCIKASIQAXKKCPTC 177 +T CGH FC +C +I +K PTC Sbjct: 266 ATTCGHHFCEQC---AITRYRKTPTC 288
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK-KCPTCRRKL 165 T CGH FC C+ A + + KC C+ + Sbjct: 66 TECGHRFCESCMAALLSSSSPKCTACQESI 95
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 29.6 bits (65), Expect = 2.1 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H +C CI+ + +CPTC Sbjct: 41 CSHNYCSLCIRKFLSYKTQCPTC 63
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKA--SIQAXKKCPTCR 174 +A + CGH FC C+ +Q CP C+ Sbjct: 30 DAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCK 61
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 29.6 bits (65), Expect = 2.1 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 12/38 (31%) Frame = -3 Query: 251 TXCGHIFCXKCI-----KASIQAXKK-------CPTCR 174 T CGH FC +CI K ++ KK CP CR Sbjct: 29 TACGHNFCRECIQMSWEKGKVKKGKKKQKGSFPCPECR 66
>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) Length = 1208 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCR 174 N S C H F +CI+ + CPTCR Sbjct: 1159 NLSVLPCAHKFHAQCIRPWLMQQGTCPTCR 1188
>RN126_XENTR (Q6DIP3) RING finger protein 126| Length = 311 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 C H+F CI ++ CP CR+ L+ N Sbjct: 245 CNHLFHNDCIIPWLEQHDTCPVCRKSLSGQN 275
>DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3 homolog) Length = 1204 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCR 174 N S C H F +CI+ + CPTCR Sbjct: 1155 NLSVLPCAHKFHSQCIRPWLMQQGTCPTCR 1184
>YR311_MIMIV (Q5UPZ3) Hypothetical RING finger protein R311| Length = 659 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTIS 156 CGH C C+ + K CP C + I+ Sbjct: 517 CGHTVCLTCVLNILPNSKGCPLCMEPININ 546
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 6/36 (16%) Frame = -3 Query: 251 TXCGHIFCXKCI------KASIQAXKKCPTCRRKLT 162 T C H FC CI + ++ K CP CR ++ Sbjct: 832 TPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPIS 867
>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G| Length = 362 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFP 147 C H F CI +++ CP CR +T N P Sbjct: 161 CNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNP 193
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 29.3 bits (64), Expect = 2.8 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKK--CPTCRRK 168 T CGHIFC C +A KK C C ++ Sbjct: 169 TECGHIFCKACFLDRYKAKKKGTCFICHKE 198
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 29.3 bits (64), Expect = 2.8 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCP 183 T CGH+FC C+ ++CP Sbjct: 31 TPCGHVFCASCLLPWAVRRRRCP 53
>ATL2E_ARATH (Q9SJJ7) RING-H2 finger protein ATL2E| Length = 237 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 CGH+F C+ + + CP CR S+ Sbjct: 159 CGHVFHVDCVDTWLSSYVTCPLCRSNQLFSD 189
>PEX12_DROME (Q9VPT5) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 297 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/35 (28%), Positives = 19/35 (54%) Frame = -3 Query: 242 GHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 G++FC KCI + ++ CP +++ + R Y Sbjct: 261 GYVFCWKCIVSHMKEHGTCPVTHYPISLDDLVRIY 295
>ATL4C_ARATH (Q9M0R5) Putative RING-H2 finger protein ATL4C precursor| Length = 345 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI 159 C H F CI + + CP CR L++ Sbjct: 142 CSHTFHANCIDVWLSSWSTCPVCRANLSL 170
>ATL2I_ARATH (Q8RX29) RING-H2 finger protein ATL2I| Length = 217 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H+F KCI ++ CP CR Sbjct: 166 CNHLFHLKCIDTWLRLNPTCPVCR 189
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 29.3 bits (64), Expect = 2.8 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 12/38 (31%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXK------------KCPTCR 174 T CGH FC +CI+ S + K CP CR Sbjct: 29 TACGHNFCRECIQMSWEKGKGKKGKKKQKGSFPCPECR 66
>MAT1_MOUSE (P51949) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) Length = 309 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Frame = -3 Query: 245 CGHIFCXKCIK-ASIQAXKKCPTCRRKLTISNF 150 CGH C C+ ++ CP C L SNF Sbjct: 26 CGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58
>MAT1_HUMAN (P51948) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) (Cyclin G1-interacting protein) (RING finger protein 66) Length = 309 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Frame = -3 Query: 245 CGHIFCXKCIK-ASIQAXKKCPTCRRKLTISNF 150 CGH C C+ ++ CP C L SNF Sbjct: 26 CGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58
>ATL5I_ARATH (Q9FL07) RING-H2 finger protein ATL5I| Length = 376 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNF 150 C H F CI +Q+ CP CR L F Sbjct: 162 CSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGF 193
>ATL4H_ARATH (P0C041) Putative RING-H2 finger protein ATL4H| Length = 336 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI 159 C H F CI +++ CP CR K+ + Sbjct: 200 CNHTFHVVCIDRWLKSHSNCPLCRAKIIV 228
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H FC CI ++ CPTC+ Sbjct: 577 CKHEFCAPCINKAMSYKPICPTCQ 600
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXK------KCPTCRRKLTISN 153 A T CGH+FC C+ + + + C CR K+ + + Sbjct: 216 ALMTLCGHVFCCPCLFQMVNSSRTCRQFGHCALCRSKVYLKD 257
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTCR 174 A + C H FC CI+ ++ CP C+ Sbjct: 24 ARALPCLHAFCLACIRRWLEGRPTCPLCK 52
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTCR 174 A + C H FC CI+ ++ CP C+ Sbjct: 24 ARALPCLHAFCLACIRRWLEGRPTCPLCK 52
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = -3 Query: 251 TXCGHIFCXKCIK---ASIQAXKKCPTCR 174 T CGH FC +CI+ + CP CR Sbjct: 29 TDCGHNFCRECIRRCWGQPEGPYACPECR 57
>ATL5F_ARATH (Q9LX93) RING-H2 finger protein ATL5F| Length = 301 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFP 147 C H F CI + + K CP CR + + P Sbjct: 154 CSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEP 186
>ATL4F_ARATH (Q9SN27) RING-H2 finger protein ATL4F| Length = 225 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 CGH F +CI + + CP CR L Sbjct: 116 CGHTFHMECIDLWLTSHTTCPLCRLSL 142
>ATL4E_ARATH (Q9SN28) RING-H2 finger protein ATL4E| Length = 236 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 CGH F +CI + + CP CR L Sbjct: 130 CGHTFHMECIDLWLTSHTTCPLCRLSL 156
>ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING finger protein| 115) Length = 304 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F CI ++ CP CR+ L Sbjct: 246 CNHFFHSSCIVPWLELHDTCPVCRKSL 272
>ATL5M_ARATH (Q9FGJ6) RING-H2 finger protein ATL5M precursor| Length = 166 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F KCI + CPTCR + Sbjct: 126 CQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>YEEA_SCHPO (O13826) Hypothetical RING finger protein C19A8.10 in chromosome I| Length = 254 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = -3 Query: 254 STXCGHIFCXKC---IKASIQAXKKC--PTCRRKLTISN 153 +T CGH++C C +K S ++ KC C R L N Sbjct: 209 ATKCGHVYCGSCAKVLKTSKRSQSKCLVNDCGRYLNTKN 247
>ATL2H_ARATH (Q6NKR1) RING-H2 finger protein ATL2H| Length = 254 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 T C H F CI + K CP CR +L Sbjct: 120 TVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)| Length = 305 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F CI ++ CP CR+ L Sbjct: 247 CNHFFHSSCIVPWLELHDTCPVCRKSL 273
>RNF17_MOUSE (Q99MV7) RING finger protein 17| Length = 626 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQ-AXKKCPTCRRKLTIS 156 CGH FC C+ A + KC C T+S Sbjct: 49 CGHAFCELCLSAPQEYTTSKCTDCEVHTTVS 79
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = -3 Query: 251 TXCGHIFCXKCIK---ASIQAXKKCPTCR 174 T CGH FC +CI+ + CP CR Sbjct: 29 TDCGHNFCRECIRRCWGQPEGPYACPECR 57
>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43| Length = 446 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 3/27 (11%) Frame = -3 Query: 245 CGHIFCXKCIKAS---IQAXKKCPTCR 174 CGH FC C+ S Q+ CP CR Sbjct: 30 CGHSFCRPCLCLSWEEAQSPANCPACR 56
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%) Frame = -3 Query: 245 CGHIFCXKCI---KASIQAXKKCPTCRRKLTISNFP 147 CGH +C C+ + + CP CR+ + S+ P Sbjct: 31 CGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSSSP 66
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = -3 Query: 245 CGHIFCXKCIKA--SIQAXKKCPTCRRKLT 162 CGH FC CI Q+ CP C+ +T Sbjct: 161 CGHNFCRSCIDKVWEGQSSFACPECKESIT 190
>DP2L_METJA (Q59024) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)| Length = 1139 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMAD 123 N + C C K S+ + CP C K+ + NF R P+ D Sbjct: 658 NTDDVDVSYTRCPNCGKISLY--RVCPFCGTKVELDNFGRIKAPLKD 702
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTC 177 N T CGH FC C ++Q +K P+C Sbjct: 250 NPIVTKCGHYFCESC---ALQRYRKNPSC 275
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H FC CI ++ K CP C Sbjct: 34 CLHSFCKTCIVRYLETSKYCPIC 56
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H FC CI ++ K CP C Sbjct: 34 CLHSFCKTCIVRYLETSKYCPIC 56
>ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc finger protein| RHA3b) Length = 200 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F CI + + CP+CRR L Sbjct: 132 CSHAFHVACIDKWLTSRSSCPSCRRIL 158
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H FC CI ++ K CP C Sbjct: 34 CLHSFCKTCIVRYLETSKYCPIC 56
>RN139_MOUSE (Q7TMV1) RING finger protein 139| Length = 668 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 +A T C H F C++ + CP C +K+ I + Sbjct: 557 SARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIED 593
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T CGH FC C ++Q +K P+C Sbjct: 266 TKCGHYFCESC---ALQRYRKNPSC 287
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 3/34 (8%) Frame = -3 Query: 245 CGHIFCXKC---IKASIQAXKKCPTCRRKLTISN 153 CGH+FC C I CP C++ T N Sbjct: 31 CGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKEN 64
>SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven in absentia| homolog 4) Length = 327 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = -3 Query: 242 GHIFCXKCIKASIQAXKKCPTCRRKL 165 GH C C ++ +CPTCR++L Sbjct: 81 GHTLCSTC---KVRVHNRCPTCRQEL 103
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQA-XKKCPTCR 174 T C H+FC CI ++ CP+CR Sbjct: 306 TNCKHVFCRVCILRCLKVMGSYCPSCR 332
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T C H FC CI +CP C Sbjct: 151 TECLHTFCKSCIVRHFYYSNRCPKC 175
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H FC CI ++ K CP C Sbjct: 34 CLHSFCKTCIVRYLETNKYCPMC 56
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTC 177 C H FC CI ++ K CP C Sbjct: 34 CLHSFCKTCIVRYLETNKYCPMC 56
>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor| Length = 327 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/27 (37%), Positives = 12/27 (44%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H F CI + + CP CR L Sbjct: 147 CSHAFHASCIDVWLSSRSTCPVCRASL 173
>RN139_HUMAN (Q8WU17) RING finger protein 139 (Translocation in renal carcinoma| on chromosome 8) Length = 664 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = -3 Query: 263 NASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLTISN 153 +A T C H F C++ + CP C +K+ I + Sbjct: 557 SARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIED 593
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T C H FC CI +CP C Sbjct: 150 TECLHTFCKSCIVRHFYYSNRCPKC 174
>ATL2F_ARATH (O64762) Putative RING-H2 finger protein ATL2F| Length = 302 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/36 (30%), Positives = 15/36 (41%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXY 138 C H+F C+ + CP CR L + R Y Sbjct: 115 CCHVFHADCVSVWLSDHSTCPLCRVDLCLQPGERSY 150
>ATL1C_ARATH (Q9SK92) RING-H2 finger protein ATL1C precursor (RING-H2 finger| protein ATL15) Length = 381 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H+F CI A +++ CP CR L Sbjct: 137 CCHVFHPGCIDAWLRSQTTCPLCRANL 163
>ATL1A_ARATH (P93823) RING-H2 finger protein ATL1A| Length = 381 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 11/56 (19%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRK-----------LTISNFPRXYXPMADN*NL 111 C H+F CI +Q CP CR ++ + PR P + N NL Sbjct: 153 CCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNL 208
>TUL1_YEAST (P36096) Transmembrane ubiquitin ligase 1 (EC 6.3.2.-)| Length = 758 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTCRRKL 165 T C H+F C++ + +CP CR L Sbjct: 727 TPCNHVFHTSCLENWMNYKLQCPVCRSPL 755
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Frame = -3 Query: 245 CGHIFCXKCI---KASIQAXKKCPTCRR 171 CGH +C C+ + A +CP CR+ Sbjct: 31 CGHSYCKGCLVSLSCHLDAELRCPVCRQ 58
>ATL5P_ARATH (Q9FKX5) RING-H2 finger protein ATL5P| Length = 221 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H+F CI ++ CP CRR L Sbjct: 195 CHHMFHLPCIDKWLRRHASCPLCRRHL 221
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = -3 Query: 257 SSTXCGHIFCXKCIKASI--QAXKK----CPTCRRKLTISNFPRXYXPM 129 S T C H FC C+ I Q KK CP CR ++ +N + P+ Sbjct: 873 SITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVLKLKEPI 921
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 6/36 (16%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKK------CPTCRRKLT 162 T CGH +C C+ +K CP CR ++ Sbjct: 932 TPCGHAYCLNCVLEHFDFQEKNLQKPLCPNCREPIS 967
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 28.5 bits (62), Expect = 4.7 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQAXKKCPTC 177 T C H FC CI +CP C Sbjct: 149 TECLHTFCKSCIVRHFYYSNRCPKC 173
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -3 Query: 260 ASSTXCGHIFCXKCIKASIQAXKKCPTCRRKLT 162 A + C H FC CI+ CP C ++T Sbjct: 57 AQTLPCMHKFCLDCIQRWTLTSTACPLCNARVT 89
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Frame = -3 Query: 254 STXCGHIFCXKCIKAS--IQAXK-KCPTCRR 171 +T CGH FC C+ + +Q +CP CR+ Sbjct: 25 TTPCGHNFCTSCLDETWVVQGPPYRCPQCRK 55
>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING| finger protein 64) Length = 485 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 7/31 (22%) Frame = -3 Query: 245 CGHIFCXKCIKA-------SIQAXKKCPTCR 174 C H FC KCI+ + K CP CR Sbjct: 340 CNHTFCLKCIRKWRSAKEFESRIVKSCPQCR 370
>ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory protein (Leucine| repeat protein) (VSG expression site-associated protein F14.9) Length = 630 Score = 28.1 bits (61), Expect = 6.2 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKL 165 C H+FC C+ +Q +CP+C+R++ Sbjct: 27 CRHVFCTACV---VQRW-RCPSCQRRI 49
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 28.1 bits (61), Expect = 6.2 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTC 177 C H FC +C++ I + +KCP C Sbjct: 782 CMHTFCKQCLEQRIASRQRKCPAC 805
>HEX3_YEAST (P32828) Hexose metabolism-related protein HEX3| Length = 619 Score = 28.1 bits (61), Expect = 6.2 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCRRKLTI---SNFPRXYXP 132 CGH FC +C A KK ++KL S P Y P Sbjct: 556 CGHAFCGRCFARIDNAKKKSKMPKKKLAQLKGSAHPDNYGP 596
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 28.1 bits (61), Expect = 6.2 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Frame = -3 Query: 251 TXCGHIFCXKCIKASIQA-XKKCPTCR 174 T C H+FC CI ++ CP+CR Sbjct: 303 TSCKHLFCRICILRCLKVMGSYCPSCR 329
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 6/33 (18%) Frame = -3 Query: 254 STXCGHIFCXKCIKAS------IQAXKKCPTCR 174 S CGH FC C+ A+ + CP CR Sbjct: 27 SLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>RNF17_HUMAN (Q9BXT8) RING finger protein 17| Length = 653 Score = 28.1 bits (61), Expect = 6.2 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXK-KCPTCRRKLTISNFPRXYXPMA 126 CGH FC C+ + + CP C T N + Y PMA Sbjct: 51 CGHAFCELCLLMTEECTTIICPDC-EVATAVNTRQRYYPMA 90
>RNF38_MOUSE (Q8BI21) RING finger protein 38| Length = 518 Score = 28.1 bits (61), Expect = 6.2 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -3 Query: 245 CGHIFCXKCIKASIQAXKKCPTCR 174 C H F KC+ ++ + CP CR Sbjct: 484 CNHEFHAKCVDKWLKGNRTCPICR 507
>ZP2_RAT (O54767) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 695 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -3 Query: 239 HIFCXKCIKASIQAXKKCPTCRRKLTISNFPRXYXPMAD-N*NLXSXSWSI 90 H FC I+A I + C L +FP+ + +AD N N+ W I Sbjct: 120 HFFC-PAIQAEIHEVSEIVVCMEDLISFSFPQLFSRLADENQNVSEMGWII 169
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 28.1 bits (61), Expect = 6.2 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -3 Query: 245 CGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 153 C H+FC CI A CPTC + L S+ Sbjct: 311 CRHLFCRLCIIRYTHALGPNCPTCNQHLNPSH 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,665,115 Number of Sequences: 219361 Number of extensions: 341573 Number of successful extensions: 1714 Number of sequences better than 10.0: 269 Number of HSP's better than 10.0 without gapping: 1679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1699 length of database: 80,573,946 effective HSP length: 63 effective length of database: 66,754,203 effective search space used: 1602100872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
