ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8a19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 202 8e-49
2gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 202 8e-49
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
4dbj|AK111590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
5gb|U41993.1| Caenorhabditis elegans cosmid F44A2, complete sequence 48 0.029
6ref|NM_073005.2| Caenorhabditis elegans F44A2.3 (F44A2.3) mRNA, ... 48 0.029
7ref|NM_124213.3| Arabidopsis thaliana ATP binding / protein bind... 46 0.11
8gb|AF083807.1| Arabidopsis thaliana clone sps952 unknown mRNA 46 0.11
9gb|AY074386.1| Arabidopsis thaliana putative receptor protein ki... 46 0.11
10gb|AF367312.1| Arabidopsis thaliana AT5g48380/MJE7_1 mRNA, compl... 46 0.11
11gb|AY062559.1| Arabidopsis thaliana receptor-like protein kinase... 46 0.11
12emb|BX831030.1|CNS0A1O9 Arabidopsis thaliana Full-length cDNA Co... 46 0.11
13dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.11
14gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
15gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 42 1.8
16gb|AC025524.9| Homo sapiens chromosome 8, clone RP11-705O24, com... 42 1.8
17gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, c... 42 1.8
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
19gb|AC008064.2| Homo sapiens BAC clone RP11-178E24 from 2, comple... 42 1.8
20dbj|AK073005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
21emb|BX547937.9| Zebrafish DNA sequence from clone CH211-202N2 in... 42 1.8
22dbj|AK060377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
24gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, comp... 40 7.0
25gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, comple... 40 7.0
26gb|AC114572.13| Mus musculus chromosome 14, clone RP23-143M7, co... 40 7.0
27gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosom... 40 7.0
28gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosom... 40 7.0
29gb|AC144428.1| Pan troglodytes BAC clone RP43-2C19 from 7, compl... 40 7.0
30gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, com... 40 7.0
31gb|AC106872.5| Homo sapiens BAC clone RP11-366M4 from 4, complet... 40 7.0
32gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosom... 40 7.0
33gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complet... 40 7.0
34gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome ... 40 7.0
35gb|AC079150.3| Homo sapiens BAC clone RP11-155F11 from 2, comple... 40 7.0
36gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I2... 40 7.0
37emb|BX255907.8| Zebrafish DNA sequence from clone DKEY-4P13 in l... 40 7.0
38gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.0
39emb|CT010520.15| Mouse DNA sequence from clone RP23-349A19 on ch... 40 7.0
40gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, comple... 40 7.0
41emb|AL928604.9| Mouse DNA sequence from clone RP23-220K22 on chr... 40 7.0 
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
             complete sequence
          Length = 132017

 Score =  202 bits (102), Expect = 8e-49
 Identities = 260/312 (83%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                         
Query: 212   ggcaacaatgagctcgtccggggtttctccatctgtggttagaggtggcagcatcat--- 268
             ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||   
Sbjct: 28211 ggcaacaatgagctcgtcaagggtttctccatctgtgcttagaggtggcagcatcatcaa 28270

                                                                         
Query: 269   gtcgtccccggccgagaaatggtacttctccccaatggccctaagcagctgataaacctc 328
             ||| ||| | ||||||||||||||||| || |||||||| || || |||||||| |||||
Sbjct: 28271 gtcatcctccgccgagaaatggtacttttctccaatggctctgaggagctgatagacctc 28330

                                                                         
Query: 329   aaacatggtgggtctctccttagcggtggtgactgtgcaagaacacgcgactttcaggaa 388
             |||||| || ||||||||||| |  ||||  | |||||||||||| ||||||||||| ||
Sbjct: 28331 aaacattgtcggtctctcctttggagtggaaattgtgcaagaacatgcgactttcagaaa 28390

                                                                         
Query: 389   ttgcatcagctcactgtcattgtccttcccgatcaaagacttgtcgattgagtcttggag 448
             |||||| ||||| | |||| || ||||||| ||||| |||||||| |  |  ||||||||
Sbjct: 28391 ttgcattagctcgccgtcactgcccttccctatcaatgacttgtcaacggcatcttggag 28450

                                                                         
Query: 449   aatagcattgttggataggtaagtgatccattctactagattccccctgaagttgtctgg 508
              |  |||||||| ||||||||  ||||||| ||||||||  |||| ||||| || || ||
Sbjct: 28451 gagggcattgtttgataggtagttgatccactctactaggctccctctgaaattctccgg 28510

                         
Query: 509   agcagtggaaac 520
              ||||| |||||
Sbjct: 28511 tgcagttgaaac 28522
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
              complete sequence
          Length = 149870

 Score =  202 bits (102), Expect = 8e-49
 Identities = 260/312 (83%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                          
Query: 212    ggcaacaatgagctcgtccggggtttctccatctgtggttagaggtggcagcatcat--- 268
              ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||   
Sbjct: 137875 ggcaacaatgagctcgtcaagggtttctccatctgtgcttagaggtggcagcatcatcaa 137934

                                                                          
Query: 269    gtcgtccccggccgagaaatggtacttctccccaatggccctaagcagctgataaacctc 328
              ||| ||| | ||||||||||||||||| || |||||||| || || |||||||| |||||
Sbjct: 137935 gtcatcctccgccgagaaatggtacttttctccaatggctctgaggagctgatagacctc 137994

                                                                          
Query: 329    aaacatggtgggtctctccttagcggtggtgactgtgcaagaacacgcgactttcaggaa 388
              |||||| || ||||||||||| |  ||||  | |||||||||||| ||||||||||| ||
Sbjct: 137995 aaacattgtcggtctctcctttggagtggaaattgtgcaagaacatgcgactttcagaaa 138054

                                                                          
Query: 389    ttgcatcagctcactgtcattgtccttcccgatcaaagacttgtcgattgagtcttggag 448
              |||||| ||||| | |||| || ||||||| ||||| |||||||| |  |  ||||||||
Sbjct: 138055 ttgcattagctcgccgtcactgcccttccctatcaatgacttgtcaacggcatcttggag 138114

                                                                          
Query: 449    aatagcattgttggataggtaagtgatccattctactagattccccctgaagttgtctgg 508
               |  |||||||| ||||||||  ||||||| ||||||||  |||| ||||| || || ||
Sbjct: 138115 gagggcattgtttgataggtagttgatccactctactaggctccctctgaaattctccgg 138174

                          
Query: 509    agcagtggaaac 520
               ||||| |||||
Sbjct: 138175 tgcagttgaaac 138186
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  202 bits (102), Expect = 8e-49
 Identities = 260/312 (83%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                            
Query: 212      ggcaacaatgagctcgtccggggtttctccatctgtggttagaggtggcagcatcat--- 268
                ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||   
Sbjct: 20139550 ggcaacaatgagctcgtcaagggtttctccatctgtgcttagaggtggcagcatcatcaa 20139609

                                                                            
Query: 269      gtcgtccccggccgagaaatggtacttctccccaatggccctaagcagctgataaacctc 328
                ||| ||| | ||||||||||||||||| || |||||||| || || |||||||| |||||
Sbjct: 20139610 gtcatcctccgccgagaaatggtacttttctccaatggctctgaggagctgatagacctc 20139669

                                                                            
Query: 329      aaacatggtgggtctctccttagcggtggtgactgtgcaagaacacgcgactttcaggaa 388
                |||||| || ||||||||||| |  ||||  | |||||||||||| ||||||||||| ||
Sbjct: 20139670 aaacattgtcggtctctcctttggagtggaaattgtgcaagaacatgcgactttcagaaa 20139729

                                                                            
Query: 389      ttgcatcagctcactgtcattgtccttcccgatcaaagacttgtcgattgagtcttggag 448
                |||||| ||||| | |||| || ||||||| ||||| |||||||| |  |  ||||||||
Sbjct: 20139730 ttgcattagctcgccgtcactgcccttccctatcaatgacttgtcaacggcatcttggag 20139789

                                                                            
Query: 449      aatagcattgttggataggtaagtgatccattctactagattccccctgaagttgtctgg 508
                 |  |||||||| ||||||||  ||||||| ||||||||  |||| ||||| || || ||
Sbjct: 20139790 gagggcattgtttgataggtagttgatccactctactaggctccctctgaaattctccgg 20139849

                            
Query: 509      agcagtggaaac 520
                 ||||| |||||
Sbjct: 20139850 tgcagttgaaac 20139861
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>dbj|AK111590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089M02, full
            insert sequence
          Length = 2434

 Score =  194 bits (98), Expect = 2e-46
 Identities = 259/312 (83%), Gaps = 3/312 (0%)
 Strand = Plus / Minus

                                                                        
Query: 212  ggcaacaatgagctcgtccggggtttctccatctgtggttagaggtggcagcatcat--- 268
            ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||   
Sbjct: 2049 ggcaacaatgagctcgtcaagggtttctccatctgtgcttagaggtggcagcatcatcaa 1990

                                                                        
Query: 269  gtcgtccccggccgagaaatggtacttctccccaatggccctaagcagctgataaacctc 328
            ||| ||| | ||||||||||||||||| || |||||||| || || |||||||| |||||
Sbjct: 1989 gtcatcctccgccgagaaatggtacttttctccaatggctctgaggagctgatagacctc 1930

                                                                        
Query: 329  aaacatggtgggtctctccttagcggtggtgactgtgcaagaacacgcgactttcaggaa 388
            |||||| || ||||||||||| |  ||||  | |||||||||||| | ||||||||| ||
Sbjct: 1929 aaacattgtcggtctctcctttggagtggaaattgtgcaagaacatgtgactttcagaaa 1870

                                                                        
Query: 389  ttgcatcagctcactgtcattgtccttcccgatcaaagacttgtcgattgagtcttggag 448
            |||||| ||||| | |||| || ||||||| ||||| |||||||| |  |  ||||||||
Sbjct: 1869 ttgcattagctcgccgtcactgcccttccctatcaatgacttgtcaacggcatcttggag 1810

                                                                        
Query: 449  aatagcattgttggataggtaagtgatccattctactagattccccctgaagttgtctgg 508
             |  |||||||| ||||||||  ||||||| ||||||||  |||| ||||| || || ||
Sbjct: 1809 gagggcattgtttgataggtagttgatccactctactaggctccctctgaaattctccgg 1750

                        
Query: 509  agcagtggaaac 520
             ||||| |||||
Sbjct: 1749 tgcagttgaaac 1738
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>gb|U41993.1| Caenorhabditis elegans cosmid F44A2, complete sequence
          Length = 38640

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 419   gatcaaagacttgtcgattgagtc 442
             ||||||||||||||||||||||||
Sbjct: 15202 gatcaaagacttgtcgattgagtc 15179
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>ref|NM_073005.2| Caenorhabditis elegans F44A2.3 (F44A2.3) mRNA, complete cds
          Length = 1887

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 419 gatcaaagacttgtcgattgagtc 442
           ||||||||||||||||||||||||
Sbjct: 207 gatcaaagacttgtcgattgagtc 184
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>ref|NM_124213.3| Arabidopsis thaliana ATP binding / protein binding / protein kinase/
            protein serine/threonine kinase/ protein-tyrosine kinase
            AT5G48380 mRNA, complete cds
          Length = 2706

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 295  tctccccaatggccctaagcagctgataaacctcaaacatggt 337
            |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 2122 tctctccaatggctcttagaagctgataaacttcaaacatggt 2080
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>gb|AF083807.1| Arabidopsis thaliana clone sps952 unknown mRNA
          Length = 2277

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 295  tctccccaatggccctaagcagctgataaacctcaaacatggt 337
            |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 1993 tctctccaatggctcttagaagctgataaacttcaaacatggt 1951
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>gb|AY074386.1| Arabidopsis thaliana putative receptor protein kinase (At5g48380)
            mRNA, complete cds
          Length = 2404

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 295  tctccccaatggccctaagcagctgataaacctcaaacatggt 337
            |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 2008 tctctccaatggctcttagaagctgataaacttcaaacatggt 1966
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>gb|AF367312.1| Arabidopsis thaliana AT5g48380/MJE7_1 mRNA, complete cds
          Length = 2298

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 295  tctccccaatggccctaagcagctgataaacctcaaacatggt 337
            |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 2020 tctctccaatggctcttagaagctgataaacttcaaacatggt 1978
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>gb|AY062559.1| Arabidopsis thaliana receptor-like protein kinase (At5g48380; MJE7.1)
            mRNA, complete cds
          Length = 2211

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 295  tctccccaatggccctaagcagctgataaacctcaaacatggt 337
            |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 2017 tctctccaatggctcttagaagctgataaacttcaaacatggt 1975
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>emb|BX831030.1|CNS0A1O9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS51ZA06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2381

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 295  tctccccaatggccctaagcagctgataaacctcaaacatggt 337
            |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 2122 tctctccaatggctcttagaagctgataaacttcaaacatggt 2080
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>dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE7
          Length = 74298

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 295 tctccccaatggccctaagcagctgataaacctcaaacatggt 337
           |||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 92  tctctccaatggctcttagaagctgataaacttcaaacatggt 134
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>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map
             near S2137, complete sequence
          Length = 197516

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 285   aaatggtacttctccccaatggccctaagcagctgataaacctcaaacatggtgggtctc 344
             |||||||| ||||| ||||| || || |  ||||| |||||||||||||| || ||||| 
Sbjct: 99121 aaatggtatttctctccaatagctctcattagctggtaaacctcaaacattgtcggtctt 99062

                  
Query: 345   tcctt 349
             |||||
Sbjct: 99061 tcctt 99057
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>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 136    catggaaaaaatattaaagac 156
              |||||||||||||||||||||
Sbjct: 124736 catggaaaaaatattaaagac 124756
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>gb|AC025524.9| Homo sapiens chromosome 8, clone RP11-705O24, complete sequence
          Length = 165720

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 479    ttctactagattccccctgaa 499
              |||||||||||||||||||||
Sbjct: 110046 ttctactagattccccctgaa 110066
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>gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, complete sequence
          Length = 188858

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    catggaaaaaatattaaagac 156
              |||||||||||||||||||||
Sbjct: 149309 catggaaaaaatattaaagac 149289
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 285     aaatggtacttctccccaatggccctaagcagctgataaacctcaaacatggtgggtctc 344
               |||||||| ||||| ||||| || || |  ||||| |||||||||||||| || ||||| 
Sbjct: 8018393 aaatggtatttctctccaatagctctcattagctggtaaacctcaaacattgtcggtctt 8018334

                    
Query: 345     tcctt 349
               |||||
Sbjct: 8018333 tcctt 8018329
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>gb|AC008064.2| Homo sapiens BAC clone RP11-178E24 from 2, complete sequence
          Length = 172579

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 109   cgctactcacttgagcatggtaatg 133
             ||||||||||||| |||||||||||
Sbjct: 91922 cgctactcacttgggcatggtaatg 91946
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>dbj|AK073005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150L22, full
            insert sequence
          Length = 1959

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 285  aaatggtacttctccccaatggccctaagcagctgataaacctcaaacatggtgggtctc 344
            |||||||| ||||| ||||| || || |  ||||| |||||||||||||| || ||||| 
Sbjct: 1424 aaatggtatttctctccaatagctctcattagctggtaaacctcaaacattgtcggtctt 1365

                 
Query: 345  tcctt 349
            |||||
Sbjct: 1364 tcctt 1360
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>emb|BX547937.9| Zebrafish DNA sequence from clone CH211-202N2 in linkage group 19,
             complete sequence
          Length = 135628

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   ttagaggtggcagcatcatgt 270
             |||||||||||||||||||||
Sbjct: 38733 ttagaggtggcagcatcatgt 38713
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>dbj|AK060377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D03, full
           insert sequence
          Length = 1180

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 285 aaatggtacttctccccaatggccctaagcagctgataaacctcaaacatggtgggtctc 344
           |||||||| ||||| ||||| || || |  ||||| |||||||||||||| || ||||| 
Sbjct: 655 aaatggtatttctctccaatagctctcattagctggtaaacctcaaacattgtcggtctt 596

                
Query: 345 tcctt 349
           |||||
Sbjct: 595 tcctt 591
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 285     aaatggtacttctccccaatggccctaagcagctgataaacctcaaacatggtgggtctc 344
               |||||||| ||||| ||||| || || |  ||||| |||||||||||||| || ||||| 
Sbjct: 8088332 aaatggtatttctctccaatagctctcattagctggtaaacctcaaacattgtcggtctt 8088273

                    
Query: 345     tcctt 349
               |||||
Sbjct: 8088272 tcctt 8088268
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>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    ctagattccccctgaagttg 503
              ||||||||||||||||||||
Sbjct: 224871 ctagattccccctgaagttg 224852
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>gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, complete sequence
          Length = 157607

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     actatatatacattgtatgc 101
              ||||||||||||||||||||
Sbjct: 149579 actatatatacattgtatgc 149560
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>gb|AC114572.13| Mus musculus chromosome 14, clone RP23-143M7, complete sequence
          Length = 188776

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    atatatacattgtatgcagc 104
             ||||||||||||||||||||
Sbjct: 40862 atatatacattgtatgcagc 40843
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>gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosome 16, complete
             sequence
          Length = 172697

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ggtttctccatctgtggtta 252
             ||||||||||||||||||||
Sbjct: 94939 ggtttctccatctgtggtta 94920
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>gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosome 12, complete sequence
          Length = 171251

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    cccatggaaaaaatattaaa 153
              ||||||||||||||||||||
Sbjct: 119221 cccatggaaaaaatattaaa 119202
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>gb|AC144428.1| Pan troglodytes BAC clone RP43-2C19 from 7, complete sequence
          Length = 208183

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 298   ccccaatggccctaagcagctgat 321
             |||||||||||||| |||||||||
Sbjct: 42826 ccccaatggccctaggcagctgat 42803
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>gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, complete sequence
          Length = 147858

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ctagattccccctgaagttg 503
              ||||||||||||||||||||
Sbjct: 101109 ctagattccccctgaagttg 101128
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>gb|AC106872.5| Homo sapiens BAC clone RP11-366M4 from 4, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    catggaaaaaatattaaaga 155
              ||||||||||||||||||||
Sbjct: 107465 catggaaaaaatattaaaga 107446
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>gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosome 13, complete
             sequence
          Length = 190192

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   ggtttctccatctgtggtta 252
             ||||||||||||||||||||
Sbjct: 94003 ggtttctccatctgtggtta 94022
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>gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complete sequence
          Length = 168591

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    agagaaccaagctacaggaa 82
             ||||||||||||||||||||
Sbjct: 34499 agagaaccaagctacaggaa 34518
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>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence
          Length = 224431

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     tatgaaaattatccttgctg 33
              ||||||||||||||||||||
Sbjct: 111412 tatgaaaattatccttgctg 111431
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>gb|AC079150.3| Homo sapiens BAC clone RP11-155F11 from 2, complete sequence
          Length = 174782

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     atagcagtatgaaaattatc 26
             ||||||||||||||||||||
Sbjct: 72663 atagcagtatgaaaattatc 72682
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>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence
          Length = 152283

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 298    ccccaatggccctaagcagctgat 321
              |||||||||||||| |||||||||
Sbjct: 113723 ccccaatggccctaggcagctgat 113700
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>emb|BX255907.8| Zebrafish DNA sequence from clone DKEY-4P13 in linkage group 2, complete
              sequence
          Length = 252614

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    tggaaaaaatattaaagacc 157
              ||||||||||||||||||||
Sbjct: 200348 tggaaaaaatattaaagacc 200329
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 379     ctttcaggaattgcatcagc 398
               ||||||||||||||||||||
Sbjct: 2023134 ctttcaggaattgcatcagc 2023115
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>emb|CT010520.15| Mouse DNA sequence from clone RP23-349A19 on chromosome 14, complete
             sequence
          Length = 175582

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    atatatacattgtatgcagc 104
             ||||||||||||||||||||
Sbjct: 93867 atatatacattgtatgcagc 93848
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>gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, complete sequence
          Length = 208779

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   cccatggaaaaaatattaaa 153
             ||||||||||||||||||||
Sbjct: 29026 cccatggaaaaaatattaaa 29007
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>emb|AL928604.9| Mouse DNA sequence from clone RP23-220K22 on chromosome 2, complete
              sequence
          Length = 181572

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    ggtttctccatctgtggtta 252
              ||||||||||||||||||||
Sbjct: 106212 ggtttctccatctgtggtta 106231


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,139,462
Number of Sequences: 3902068
Number of extensions: 5139462
Number of successful extensions: 127577
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127374
Number of HSP's gapped (non-prelim): 195
length of query: 520
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 497
effective length of database: 17,143,297,704
effective search space: 8520218958888
effective search space used: 8520218958888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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