ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal27m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469858.1| Oryza sativa (japonica cultivar-group), mRNA 250 5e-63
2dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 5e-63
3gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced ... 242 1e-60
4dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
5gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced ... 216 7e-53
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 1e-36
7gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 163 1e-36
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 1e-36
9dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 1e-36
10dbj|AK099959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 3e-15
11gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 82 3e-12
12gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 82 3e-12
13gb|BT013609.1| Lycopersicon esculentum clone 132379R, mRNA sequence 50 0.010
14ref|XM_213954.3| PREDICTED: Rattus norvegicus nidogen (entactin)... 44 0.61
15gb|AY106533.1| Zea mays PCO124223 mRNA sequence 44 0.61
16gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, c... 42 2.4
17emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chr... 42 2.4
18gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 42 2.4
19emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro... 42 2.4
20ref|NM_119078.3| Arabidopsis thaliana unknown protein AT4G29330 ... 40 9.5
21ref|XM_476355.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.5
22gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 9.5
23gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 9.5
24gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 9.5
25gb|AC119886.7| Mus musculus chromosome 14, clone RP24-218I13, co... 40 9.5
26gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 9.5
27ref|XM_388651.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 9.5
28gb|CP000001.1| Bacillus cereus E33L, complete genome 40 9.5
29gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 9.5
30emb|AL162255.17| Human DNA sequence from clone RP11-18E13 on chr... 40 9.5
31gb|AY096457.1| Arabidopsis thaliana unknown protein (At4g29330) ... 40 9.5
32gb|AY063817.1| Arabidopsis thaliana unknown protein (At4g29330) ... 40 9.5
33emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.5
34emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.5
35emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 40 9.5
36gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosom... 40 9.5
37gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 9.5
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
39emb|BX826348.1|CNS0A38I Arabidopsis thaliana Full-length cDNA Co... 40 9.5
40emb|BX841558.1|CNS09YFE Arabidopsis thaliana Full-length cDNA Co... 40 9.5
41dbj|AB089954.1| Micromonospora griseorubida gene cluster for the... 40 9.5
42dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
43emb|Z36879.1|FPGDCPA F.pringlei gdcsPA gene for P-protein of the... 40 9.5
44emb|Z54239.1|FPGDCSPB F.pringlei gdcsPB gene 40 9.5
45gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cance... 40 9.5
46gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, com... 40 9.5
47gb|U43323.1|ATU43323 Arabidopsis thaliana profilin 2 and profili... 40 9.5 
>ref|XM_469858.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1641

 Score =  250 bits (126), Expect = 5e-63
 Identities = 281/333 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
            ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 1196 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 1137

                                                                        
Query: 422  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1136 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1077

                                                                        
Query: 482  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1076 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 1017

                                                                        
Query: 542  cgtggcctccttcaaggcggaccgcactaatcggtttgctatacccgttcttgggttctt 601
            |||||| ||||| || |||| |  ||| |||| ||||||||||||||| ||||| |||||
Sbjct: 1016 cgtggcttcctttaaagcggccttcaccaatctgtttgctatacccgtccttggattctt 957

                                                                        
Query: 602  gaagacaatttgcacagcagcgtcatcgctganatgctcccaaagaccgtccgaggcaaa 661
            ||||||||| ||||| |||||||| || |||| ||||||||| ||||| || || |||||
Sbjct: 956  gaagacaatctgcaccgcagcgtcgtcactgagatgctcccagagaccatctgaagcaaa 897

                                             
Query: 662  tattatgaactgatctgttggtttgagcttgcg 694
            ||| | |||| ||||  ||||||||||||||||
Sbjct: 896  tatcaggaacagatcatttggtttgagcttgcg 864
to top
>dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099H11, full
            insert sequence
          Length = 1532

 Score =  250 bits (126), Expect = 5e-63
 Identities = 281/333 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
            ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 1147 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 1088

                                                                        
Query: 422  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1087 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1028

                                                                        
Query: 482  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1027 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 968

                                                                        
Query: 542  cgtggcctccttcaaggcggaccgcactaatcggtttgctatacccgttcttgggttctt 601
            |||||| ||||| || |||| |  ||| |||| ||||||||||||||| ||||| |||||
Sbjct: 967  cgtggcttcctttaaagcggccttcaccaatctgtttgctatacccgtccttggattctt 908

                                                                        
Query: 602  gaagacaatttgcacagcagcgtcatcgctganatgctcccaaagaccgtccgaggcaaa 661
            ||||||||| ||||| |||||||| || |||| ||||||||| ||||| || || |||||
Sbjct: 907  gaagacaatctgcaccgcagcgtcgtcactgagatgctcccagagaccatctgaagcaaa 848

                                             
Query: 662  tattatgaactgatctgttggtttgagcttgcg 694
            ||| | |||| ||||  ||||||||||||||||
Sbjct: 847  tatcaggaacagatcatttggtttgagcttgcg 815
to top
>gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase
            2C 2 K2 form (BIPP2C2) mRNA, complete cds, alternatively
            spliced
          Length = 1526

 Score =  242 bits (122), Expect = 1e-60
 Identities = 280/333 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
            ||||||||||||||||||||||||| ||||||||||||| |||||||| || ||| | ||
Sbjct: 1125 ggaggagtagatgtcgacgggggcgttggtgcagttgctactcgagtcgacgacccttgt 1066

                                                                        
Query: 422  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1065 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1006

                                                                        
Query: 482  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1005 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 946

                                                                        
Query: 542  cgtggcctccttcaaggcggaccgcactaatcggtttgctatacccgttcttgggttctt 601
            |||||| ||||| || |||| |  ||| |||| ||||||||||||||| ||||| |||||
Sbjct: 945  cgtggcttcctttaaagcggccttcaccaatctgtttgctatacccgtccttggattctt 886

                                                                        
Query: 602  gaagacaatttgcacagcagcgtcatcgctganatgctcccaaagaccgtccgaggcaaa 661
            ||||||||| ||||| |||||||| || |||| ||||||||| ||||| || || |||||
Sbjct: 885  gaagacaatctgcaccgcagcgtcgtcactgagatgctcccagagaccatctgaagcaaa 826

                                             
Query: 662  tattatgaactgatctgttggtttgagcttgcg 694
            ||| | |||| ||||  ||||||||||||||||
Sbjct: 825  tatcaggaacagatcatttggtttgagcttgcg 793
to top
>dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D12, full
            insert sequence
          Length = 1635

 Score =  242 bits (122), Expect = 1e-60
 Identities = 280/333 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
            ||||||||||||||||||||||||| |||||||||||||||||||||| ||  || | ||
Sbjct: 1250 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacggcccttgt 1191

                                                                        
Query: 422  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1190 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1131

                                                                        
Query: 482  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1130 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 1071

                                                                        
Query: 542  cgtggcctccttcaaggcggaccgcactaatcggtttgctatacccgttcttgggttctt 601
            |||||| ||||| || |||| |  ||| |||| ||||||||||||||| ||||| |||||
Sbjct: 1070 cgtggcttcctttaaagcggccttcaccaatctgtttgctatacccgtccttggattctt 1011

                                                                        
Query: 602  gaagacaatttgcacagcagcgtcatcgctganatgctcccaaagaccgtccgaggcaaa 661
            ||||||||| ||||| |||||||| || |||| ||||||||| ||||| || || |||||
Sbjct: 1010 gaagacaatctgcaccgcagcgtcgtcactgagatgctcccagagaccatctgaagcaaa 951

                                             
Query: 662  tattatgaactgatctgttggtttgagcttgcg 694
            ||| | |||| ||||  ||||||||||||||||
Sbjct: 950  tatcaggaacagatcatttggtttgagcttgcg 918
to top
>gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase
            2C 2 K3 form (BIPP2C2) mRNA, complete cds, alternatively
            spliced
          Length = 1326

 Score =  216 bits (109), Expect = 7e-53
 Identities = 243/288 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
            ||||||||||||||||||||||||| ||||||||||||| |||||||| || ||| | ||
Sbjct: 1023 ggaggagtagatgtcgacgggggcgttggtgcagttgctactcgagtcgacgacccttgt 964

                                                                        
Query: 422  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 963  gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 904

                                                                        
Query: 482  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 903  atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 844

                                                                        
Query: 542  cgtggcctccttcaaggcggaccgcactaatcggtttgctatacccgttcttgggttctt 601
            |||||| ||||| || |||| |  ||| |||| ||||||||||||||| ||||| |||||
Sbjct: 843  cgtggcttcctttaaagcggccttcaccaatctgtttgctatacccgtccttggattctt 784

                                                            
Query: 602  gaagacaatttgcacagcagcgtcatcgctganatgctcccaaagacc 649
            ||||||||| ||||| |||||||| || |||| ||||||||| |||||
Sbjct: 783  gaagacaatctgcaccgcagcgtcgtcactgagatgctcccagagacc 736
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 1e-36
 Identities = 190/226 (84%)
 Strand = Plus / Plus

                                                                            
Query: 362      ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
                ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 31168638 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 31168697

                                                                            
Query: 422      ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
                 || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 31168698 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 31168757

                                                                            
Query: 482      atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
                |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 31168758 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 31168817

                                                              
Query: 542      cgtggcctccttcaaggcggaccgcactaatcggtttgctataccc 587
                |||||| ||||| || |||| |  ||| |||| |||||||||||||
Sbjct: 31168818 cgtggcttcctttaaagcggccttcaccaatctgtttgctataccc 31168863



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                            
Query: 586      ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
                |||| ||||| |||||||||||||| ||||| |||||||| || |||| ||||||||| |
Sbjct: 31168985 ccgtccttggattcttgaagacaatctgcaccgcagcgtcgtcactgagatgctcccaga 31169044

                                                                 
Query: 646      gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
                |||| || || |||||||| | |||| ||||  ||||||||||||||||
Sbjct: 31169045 gaccatctgaagcaaatatcaggaacagatcatttggtttgagcttgcg 31169093



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                          
Query: 367    agtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggtctggc 426
              ||||||||||||||||| |  ||||||||||| |||| ||||| || ||| |||| || |
Sbjct: 255390 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 255449

                                                                          
Query: 427    gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 486
              | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 255450 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 255509

               
Query: 487    g 487
              |
Sbjct: 255510 g 255510



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                          
Query: 586    ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
              |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||| |  
Sbjct: 255720 ccgttcttggattcttgaagacaatctgcaccgcagcgtcatcgctaagatgctcctagg 255779

                                                               
Query: 646    gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
              |||| || || |||||||| | ||||  |||  ||||||| ||||||||
Sbjct: 255780 gaccatctgaagcaaatatcaggaacatatcatttggtttcagcttgcg 255828
to top
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score =  163 bits (82), Expect = 1e-36
 Identities = 190/226 (84%)
 Strand = Plus / Plus

                                                                         
Query: 362   ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
             ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 89279 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 89338

                                                                         
Query: 422   ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
              || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 89339 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 89398

                                                                         
Query: 482   atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
             |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 89399 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 89458

                                                           
Query: 542   cgtggcctccttcaaggcggaccgcactaatcggtttgctataccc 587
             |||||| ||||| || |||| |  ||| |||| |||||||||||||
Sbjct: 89459 cgtggcttcctttaaagcggccttcaccaatctgtttgctataccc 89504



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                         
Query: 586   ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
             |||| ||||| |||||||||||||| ||||| |||||||| || |||| ||||||||| |
Sbjct: 89626 ccgtccttggattcttgaagacaatctgcaccgcagcgtcgtcactgagatgctcccaga 89685

                                                              
Query: 646   gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
             |||| || || |||||||| | |||| ||||  ||||||||||||||||
Sbjct: 89686 gaccatctgaagcaaatatcaggaacagatcatttggtttgagcttgcg 89734
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 1e-36
 Identities = 190/226 (84%)
 Strand = Plus / Plus

                                                                            
Query: 362      ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
                ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 31259161 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 31259220

                                                                            
Query: 422      ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
                 || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 31259221 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 31259280

                                                                            
Query: 482      atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
                |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 31259281 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 31259340

                                                              
Query: 542      cgtggcctccttcaaggcggaccgcactaatcggtttgctataccc 587
                |||||| ||||| || |||| |  ||| |||| |||||||||||||
Sbjct: 31259341 cgtggcttcctttaaagcggccttcaccaatctgtttgctataccc 31259386



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                            
Query: 586      ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
                |||| ||||| |||||||||||||| ||||| |||||||| || |||| ||||||||| |
Sbjct: 31259508 ccgtccttggattcttgaagacaatctgcaccgcagcgtcgtcactgagatgctcccaga 31259567

                                                                 
Query: 646      gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
                |||| || || |||||||| | |||| ||||  ||||||||||||||||
Sbjct: 31259568 gaccatctgaagcaaatatcaggaacagatcatttggtttgagcttgcg 31259616



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                          
Query: 367    agtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggtctggc 426
              ||||||||||||||||| |  ||||||||||| |||| ||||| || ||| |||| || |
Sbjct: 255390 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 255449

                                                                          
Query: 427    gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 486
              | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 255450 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 255509

               
Query: 487    g 487
              |
Sbjct: 255510 g 255510



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                          
Query: 586    ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
              |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||| |  
Sbjct: 255720 ccgttcttggattcttgaagacaatctgcaccgcagcgtcatcgctaagatgctcctagg 255779

                                                               
Query: 646    gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
              |||| || || |||||||| | ||||  |||  ||||||| ||||||||
Sbjct: 255780 gaccatctgaagcaaatatcaggaacatatcatttggtttcagcttgcg 255828
to top
>dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050O18, full
            insert sequence
          Length = 1776

 Score =  163 bits (82), Expect = 1e-36
 Identities = 190/226 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  ggaggagtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggt 421
            ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | ||
Sbjct: 1333 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 1274

                                                                        
Query: 422  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 481
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1273 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1214

                                                                        
Query: 482  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 541
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1213 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 1154

                                                          
Query: 542  cgtggcctccttcaaggcggaccgcactaatcggtttgctataccc 587
            |||||| ||||| || |||| |  ||| |||| |||||||||||||
Sbjct: 1153 cgtggcttcctttaaagcggccttcaccaatctgtttgctataccc 1108



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 586 ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
           |||| ||||| |||||||||||||| ||||| |||||||| || |||| ||||||||| |
Sbjct: 986 ccgtccttggattcttgaagacaatctgcaccgcagcgtcgtcactgagatgctcccaga 927

                                                            
Query: 646 gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
           |||| || || |||||||| | |||| ||||  ||||||||||||||||
Sbjct: 926 gaccatctgaagcaaatatcaggaacagatcatttggtttgagcttgcg 878
to top
>dbj|AK099959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126F07, full
            insert sequence
          Length = 1984

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 138/169 (81%)
 Strand = Plus / Minus

                                                                        
Query: 526  tgacctctctcttcttcgtggcctccttcaaggcggaccgcactaatcggtttgctatac 585
            ||||||| |||||| ||||||| |||||||| |||| |   || | || |||||||| | 
Sbjct: 1595 tgacctccctcttcctcgtggcttccttcaaagcggcctttaccactctgtttgctacat 1536

                                                                        
Query: 586  ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
            |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||| |  
Sbjct: 1535 ccgttcttggattcttgaagacaatctgcaccgcagcgtcatcgctaagatgctcctagg 1476

                                                             
Query: 646  gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
            |||| || || |||||||| | ||||  |||  ||||||| ||||||||
Sbjct: 1475 gaccatctgaagcaaatatcaggaacatatcatttggtttcagcttgcg 1427



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                        
Query: 367  agtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggtctggc 426
            ||||||||||||||||| |  ||||||||||| |||| ||||| || ||| |||| || |
Sbjct: 1747 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 1688

                                                                        
Query: 427  gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 486
            | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 1687 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 1628

             
Query: 487  g 487
            |
Sbjct: 1627 g 1627
to top
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                         
Query: 367   agtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggtctggc 426
             ||||||||||||||||| |  ||||||||||| |||| ||||| || ||| |||| || |
Sbjct: 92457 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 92516

                                                                         
Query: 427   gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 486
             | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 92517 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 92576

              
Query: 487   g 487
             |
Sbjct: 92577 g 92577



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                         
Query: 586   ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
             |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||| |  
Sbjct: 92787 ccgttcttggattcttgaagacaatctgcaccgcagcgtcatcgctaagatgctcctagg 92846

                                                              
Query: 646   gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
             |||| || || |||||||| | ||||  |||  ||||||| ||||||||
Sbjct: 92847 gaccatctgaagcaaatatcaggaacatatcatttggtttcagcttgcg 92895
to top
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                        
Query: 367  agtagatgtcgacgggggcgctggtgcagttgctgctcgagtccaccaccttggtctggc 426
            ||||||||||||||||| |  ||||||||||| |||| ||||| || ||| |||| || |
Sbjct: 7226 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 7167

                                                                        
Query: 427  gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 486
            | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 7166 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 7107

             
Query: 487  g 487
            |
Sbjct: 7106 g 7106



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 91/109 (83%)
 Strand = Plus / Minus

                                                                        
Query: 586  ccgttcttgggttcttgaagacaatttgcacagcagcgtcatcgctganatgctcccaaa 645
            |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||| |  
Sbjct: 6896 ccgttcttggattcttgaagacaatctgcaccgcagcgtcatcgctaagatgctcctagg 6837

                                                             
Query: 646  gaccgtccgaggcaaatattatgaactgatctgttggtttgagcttgcg 694
            |||| || || |||||||| | ||||  |||  ||||||| ||||||||
Sbjct: 6836 gaccatctgaagcaaatatcaggaacatatcatttggtttcagcttgcg 6788
to top
>gb|BT013609.1| Lycopersicon esculentum clone 132379R, mRNA sequence
          Length = 1807

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 636  tgctcccaaagaccgtccgaggcaaatattatgaactgatc 676
            |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 1269 tgctcccagagaccatccgaggcaaatataataaactgatc 1229
to top
>ref|XM_213954.3| PREDICTED: Rattus norvegicus nidogen (entactin) (Nid), mRNA
          Length = 3774

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 370 agatgtcgacgggggcgctggtgcagttgctgct 403
           |||||| |||| |||||||| |||||||||||||
Sbjct: 29  agatgtggacgtgggcgctgctgcagttgctgct 62
to top
>gb|AY106533.1| Zea mays PCO124223 mRNA sequence
          Length = 2059

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 443  gtcgaggtacaccacgacgacactgatgtcgtcgtggaaatg 484
            ||||||| |||||||||||||  | || ||||||||||||||
Sbjct: 1507 gtcgaggaacaccacgacgacggttatatcgtcgtggaaatg 1466
to top
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome
          Length = 134431

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 536   cttcttcgtggcctccttcaaggcg 560
             ||||||||||| |||||||||||||
Sbjct: 37275 cttcttcgtggactccttcaaggcg 37251
to top
>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a
              programmed cell death 2 (PDCD2) pseudogene, the 5' end of
              the gene for a novel C2H2 type zinc finger protein and two
              CpG islands, complete sequence
          Length = 184302

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 667    tgaactgatctgttggtttga 687
              |||||||||||||||||||||
Sbjct: 135015 tgaactgatctgttggtttga 135035
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 383     ggcgctggtgcagttgctgct 403
               |||||||||||||||||||||
Sbjct: 3293389 ggcgctggtgcagttgctgct 3293409
to top
>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 347    ctggacggagctggaggagga 367
              |||||||||||||||||||||
Sbjct: 125110 ctggacggagctggaggagga 125090
to top
>ref|NM_119078.3| Arabidopsis thaliana unknown protein AT4G29330 mRNA, complete cds
          Length = 1079

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cggagctggaggaggagtag 371
           ||||||||||||||||||||
Sbjct: 808 cggagctggaggaggagtag 827
to top
>ref|XM_476355.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 396

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 tctgcaaccctaccaccgtt 254
           ||||||||||||||||||||
Sbjct: 257 tctgcaaccctaccaccgtt 238
to top
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 546     gcctccttcaaggcggaccg 565
               ||||||||||||||||||||
Sbjct: 1314597 gcctccttcaaggcggaccg 1314578
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 378    acgggggcgctggtgcagttgctgctcg 405
              ||||| ||| ||||||||||||||||||
Sbjct: 971698 acgggcgcgatggtgcagttgctgctcg 971671
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 595     ggttcttgaagacaatttgc 614
               ||||||||||||||||||||
Sbjct: 3934912 ggttcttgaagacaatttgc 3934893
to top
>gb|AC119886.7| Mus musculus chromosome 14, clone RP24-218I13, complete sequence
          Length = 138803

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ttagtatgatatatagtgct 29
             ||||||||||||||||||||
Sbjct: 59629 ttagtatgatatatagtgct 59648
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    cgctggtgcagttgctgctc 404
              ||||||||||||||||||||
Sbjct: 537261 cgctggtgcagttgctgctc 537280
to top
>ref|XM_388651.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08475.1)
            partial mRNA
          Length = 5055

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 536  cttcttcgtggcctccttca 555
            ||||||||||||||||||||
Sbjct: 2850 cttcttcgtggcctccttca 2831
to top
>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 653     cgaggcaaatattatgaact 672
               ||||||||||||||||||||
Sbjct: 2525306 cgaggcaaatattatgaact 2525287
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    cgctggtgcagttgctgctc 404
              ||||||||||||||||||||
Sbjct: 669848 cgctggtgcagttgctgctc 669867
to top
>emb|AL162255.17| Human DNA sequence from clone RP11-18E13 on chromosome 1q24.3-25.3
             Contains part of the gene for Ral-A exchange factor
             RalGPS2 and a protein tyrosine phosphatase, non-receptor
             type 2 (PTPN2) pseudogene, complete sequence
          Length = 83148

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     taaaatttagtatgatatat 23
             ||||||||||||||||||||
Sbjct: 61337 taaaatttagtatgatatat 61356
to top
>gb|AY096457.1| Arabidopsis thaliana unknown protein (At4g29330) mRNA, complete cds
          Length = 832

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cggagctggaggaggagtag 371
           ||||||||||||||||||||
Sbjct: 693 cggagctggaggaggagtag 712
to top
>gb|AY063817.1| Arabidopsis thaliana unknown protein (At4g29330) mRNA, complete cds
          Length = 1095

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cggagctggaggaggagtag 371
           ||||||||||||||||||||
Sbjct: 810 cggagctggaggaggagtag 829
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 378     acgggggcgctggtgcagttgctgctcg 405
               ||||| ||| ||||||||||||||||||
Sbjct: 2290400 acgggcgcgatggtgcagttgctgctcg 2290373
to top
>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24
          Length = 306550

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    cctgagcttctgcggccctt 299
              ||||||||||||||||||||
Sbjct: 216419 cctgagcttctgcggccctt 216400
to top
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    cggagctggaggaggagtag 371
              ||||||||||||||||||||
Sbjct: 174924 cggagctggaggaggagtag 174943
to top
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence
          Length = 189102

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     ttagtatgatatatagtgct 29
              ||||||||||||||||||||
Sbjct: 171059 ttagtatgatatatagtgct 171078
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 378     acgggggcgctggtgcagttgctgctcg 405
               ||||| ||| ||||||||||||||||||
Sbjct: 1838069 acgggcgcgatggtgcagttgctgctcg 1838042
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    tctgcaaccctaccaccgtt 254
              ||||||||||||||||||||
Sbjct: 112546 tctgcaaccctaccaccgtt 112565
to top
>emb|BX826348.1|CNS0A38I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB18ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 962

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cggagctggaggaggagtag 371
           ||||||||||||||||||||
Sbjct: 749 cggagctggaggaggagtag 768
to top
>emb|BX841558.1|CNS09YFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH46ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1024

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 352 cggagctggaggaggagtag 371
           ||||||||||||||||||||
Sbjct: 240 cggagctggaggaggagtag 221
to top
>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide
             mycinamicin, partial and comeplete cds
          Length = 58343

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   cgaccccggtgccggtcgag 448
             ||||||||||||||||||||
Sbjct: 48111 cgaccccggtgccggtcgag 48092
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    tctgcaaccctaccaccgtt 254
              ||||||||||||||||||||
Sbjct: 111845 tctgcaaccctaccaccgtt 111864
to top
>emb|Z36879.1|FPGDCPA F.pringlei gdcsPA gene for P-protein of the glycine cleavage system
          Length = 8496

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  caccatgatcatatatatag 279
            ||||||||||||||||||||
Sbjct: 6353 caccatgatcatatatatag 6334
to top
>emb|Z54239.1|FPGDCSPB F.pringlei gdcsPB gene
          Length = 10187

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  caccatgatcatatatatag 279
            ||||||||||||||||||||
Sbjct: 7164 caccatgatcatatatatag 7145
to top
>gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203926

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    ccaccatgatcatatatata 278
              ||||||||||||||||||||
Sbjct: 136064 ccaccatgatcatatatata 136045
to top
>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence
          Length = 206641

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    ttgggttcttgaagacaatt 611
              ||||||||||||||||||||
Sbjct: 135223 ttgggttcttgaagacaatt 135242
to top
>gb|U43323.1|ATU43323 Arabidopsis thaliana profilin 2 and profilin 3 genes, complete cds
          Length = 5329

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cggagctggaggaggagtag 371
           ||||||||||||||||||||
Sbjct: 744 cggagctggaggaggagtag 763


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,644,718
Number of Sequences: 3902068
Number of extensions: 5644718
Number of successful extensions: 156369
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 155793
Number of HSP's gapped (non-prelim): 575
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top