>gb|AC118676.6| Mus musculus chromosome 7, clone RP24-178N18, complete sequence
          Length = 149930

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    ccctgaacgtaaagctccttt 326
              |||||||||||||||||||||
Sbjct: 142616 ccctgaacgtaaagctccttt 142636

>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence
          Length = 101101

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 63    actagatcatgaaaggcgcgcgttgccgc 91
             ||||||||||| | |||||||||||||||
Sbjct: 73207 actagatcatggatggcgcgcgttgccgc 73179

>gb|AC006007.1| Homo sapiens PAC clone RP5-819O4 from 7, complete sequence
          Length = 124293

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 124   atttgtaaatatatagaaaca 144
             |||||||||||||||||||||
Sbjct: 67825 atttgtaaatatatagaaaca 67845

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 96      atccattttaaaaatggattg 116
               |||||||||||||||||||||
Sbjct: 2818054 atccattttaaaaatggattg 2818074

>gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, complete sequence
          Length = 214373

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   ccctgaacgtaaagctccttt 326
             |||||||||||||||||||||
Sbjct: 83992 ccctgaacgtaaagctccttt 84012

>emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on chromosome 4, complete
              sequence
          Length = 193847

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 138    agaaacaaaacatgtagacagattt 162
              ||||| |||||||||||||||||||
Sbjct: 130267 agaaaaaaaacatgtagacagattt 130291

>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete
             sequence
          Length = 178560

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   agtaggtcccaggaagaagg 227
             ||||||||||||||||||||
Sbjct: 76251 agtaggtcccaggaagaagg 76270

>gb|AY100533.1| Uncultured bacterium clone cvf74038 16S ribosomal RNA gene, partial
           sequence
          Length = 686

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 gggcttgctcttcggtgtca 364
           ||||||||||||||||||||
Sbjct: 51  gggcttgctcttcggtgtca 70

>gb|AY555590.1| Uncultured alpha proteobacterium clone Alph-16 16S ribosomal RNA
           gene, partial sequence
          Length = 508

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 gggcttgctcttcggtgtca 364
           ||||||||||||||||||||
Sbjct: 110 gggcttgctcttcggtgtca 129

>gb|DQ129317.1| Uncultured bacterium clone AKIW558 16S ribosomal RNA gene, partial
           sequence
          Length = 1426

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 gggcttgctcttcggtgtca 364
           ||||||||||||||||||||
Sbjct: 774 gggcttgctcttcggtgtca 793

>gb|DQ129305.1| Uncultured bacterium clone AKIW867 16S ribosomal RNA gene, partial
           sequence
          Length = 1455

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 780 gggcttgctcttcggtgtcg 799

>emb|X04658.1|CERVDNA Carnation etched ring virus (CERV) DNA
          Length = 7932

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tatttgtaaatatatagaaa 142
            ||||||||||||||||||||
Sbjct: 6171 tatttgtaaatatatagaaa 6152

>emb|AJ853858.1| Carnation etched ring virus, complete genome, Indian isolate
          Length = 7924

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tatttgtaaatatatagaaa 142
            ||||||||||||||||||||
Sbjct: 6163 tatttgtaaatatatagaaa 6144

>emb|CR376829.10| Zebrafish DNA sequence from clone CH211-218I18 in linkage group 8,
             complete sequence
          Length = 197983

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   aaatatatagaaacaaaacatgta 153
             ||||||||||||| ||||||||||
Sbjct: 59271 aaatatatagaaaaaaaacatgta 59294

>emb|BX548251.5| Zebrafish DNA sequence from clone BUSM1-127I14, complete sequence
          Length = 115316

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   atatatagaaacaaaacatg 151
             ||||||||||||||||||||
Sbjct: 66893 atatatagaaacaaaacatg 66874

>gb|DQ413109.1| Uncultured bacterium clone 50 16S ribosomal RNA gene, partial
           sequence
          Length = 1415

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 759 gggcttgctcttcggtgtcg 778

>gb|DQ413102.1| Uncultured bacterium clone 43 16S ribosomal RNA gene, partial
           sequence
          Length = 1418

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 761 gggcttgctcttcggtgtcg 780

>emb|BX682531.11| Zebrafish DNA sequence from clone CH211-12C17 in linkage group 23,
              complete sequence
          Length = 171113

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    acaaaacatgtagacagatt 161
              ||||||||||||||||||||
Sbjct: 149696 acaaaacatgtagacagatt 149677



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   acaaaacatgtagacagatt 161
             ||||||||||||||||||||
Sbjct: 90968 acaaaacatgtagacagatt 90949

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 100      attttaaaaatggattgata 119
                ||||||||||||||||||||
Sbjct: 19120123 attttaaaaatggattgata 19120104

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 100     attttaaaaatggattgata 119
               ||||||||||||||||||||
Sbjct: 2647186 attttaaaaatggattgata 2647205

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 100      attttaaaaatggattgata 119
                ||||||||||||||||||||
Sbjct: 30229122 attttaaaaatggattgata 30229103

>dbj|AB231419.1| Uncultured bacterium gene for 16S ribosomal RNA, partial sequence,
           clone: SBR-Sludge-33
          Length = 560

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 473 gggcttgctcttcggtgtcg 492

>dbj|AB231392.1| Uncultured bacterium gene for 16S ribosomal RNA, partial sequence,
           clone: High-Density-68
          Length = 536

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 449 gggcttgctcttcggtgtcg 468

>dbj|AB231376.1| Uncultured bacterium gene for 16S ribosomal RNA, partial sequence,
           clone: High-Density-15
          Length = 560

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 473 gggcttgctcttcggtgtcg 492

>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0042A10
          Length = 146840

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   attttaaaaatggattgata 119
             ||||||||||||||||||||
Sbjct: 17441 attttaaaaatggattgata 17422

>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0022F10
          Length = 150498

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    attttaaaaatggattgata 119
              ||||||||||||||||||||
Sbjct: 133944 attttaaaaatggattgata 133925

>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0479D12
          Length = 148362

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   attttaaaaatggattgata 119
             ||||||||||||||||||||
Sbjct: 49408 attttaaaaatggattgata 49427

>emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in linkage group 14,
             complete sequence
          Length = 144393

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   acaaaacatgtagacagatt 161
             ||||||||||||||||||||
Sbjct: 36258 acaaaacatgtagacagatt 36239

>emb|CR450837.12| Zebrafish DNA sequence from clone CH211-51L13 in linkage group 16,
              complete sequence
          Length = 166747

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    acaaaacatgtagacagatt 161
              ||||||||||||||||||||
Sbjct: 125834 acaaaacatgtagacagatt 125853

>emb|AL929235.10| Mouse DNA sequence from clone RP23-82L23 on chromosome 2, complete
             sequence
          Length = 189012

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gatttgtaaaatttttggtc 177
             ||||||||||||||||||||
Sbjct: 10084 gatttgtaaaatttttggtc 10103

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 100      attttaaaaatggattgata 119
                ||||||||||||||||||||
Sbjct: 19046350 attttaaaaatggattgata 19046331

>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127026

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    attttaaaaatggattgata 119
              ||||||||||||||||||||
Sbjct: 105856 attttaaaaatggattgata 105875

>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete
              sequence
          Length = 179361

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     tccattttaaaaatggattg 116
              ||||||||||||||||||||
Sbjct: 135063 tccattttaaaaatggattg 135044

>gb|AC123806.4| Mus musculus BAC clone RP24-152B7 from 10, complete sequence
          Length = 160167

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   aaatatatagaaacaaaaca 149
             ||||||||||||||||||||
Sbjct: 61144 aaatatatagaaacaaaaca 61125

>gb|AC141428.4| Mus musculus BAC clone RP23-127I7 from 10, complete sequence
          Length = 164381

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    aaatatatagaaacaaaaca 149
              ||||||||||||||||||||
Sbjct: 143787 aaatatatagaaacaaaaca 143768

>gb|DQ250537.1| Uncultured bacterium clone TFOc8 16S ribosomal RNA gene, partial
           sequence
          Length = 924

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 777 gggcttgctcttcggtgtcg 796

>gb|DQ250533.1| Uncultured bacterium clone TFOb23 16S ribosomal RNA gene, partial
           sequence
          Length = 906

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gggcttgctcttcggtgtcg 451
           ||||||||||||||||||||
Sbjct: 759 gggcttgctcttcggtgtcg 778


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,464,780
Number of Sequences: 3902068
Number of extensions: 5464780
Number of successful extensions: 115482
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115210
Number of HSP's gapped (non-prelim): 272
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)