ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal27l17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 84 6e-16
2CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 73 8e-13
3CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 73 1e-12
4CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 62 2e-09
5CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein ki... 54 4e-07
6PPCK_CHLLI (Q08262) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 35 0.24
7ZN192_HUMAN (Q15776) Zinc finger protein 192 (LD5-1) 33 0.92
8RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2... 33 0.92
9RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2... 33 0.92
10Y047_MYCBO (P59967) Hypothetical protein Mb0047c 33 1.2
11Y046_MYCTU (P71703) Hypothetical protein Rv0046c/MT0052 33 1.2
12DYIN_DROME (Q24246) Dynein intermediate chain, cytosolic (DH IC)... 33 1.2
13SYN_UREPA (Q9PQC6) Asparaginyl-tRNA synthetase (EC 6.1.1.22) (As... 30 6.0
14LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX) 30 6.0

>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
 Frame = -2

Query: 737 ITLLQIKETDWFKKGFKEISFYIDNKDCLRSLDGSEEPDLCDSDSEDETAMXXXXXXXXS 558
           IT+ QI E  WFKKG+K   F           D   E    D D+               
Sbjct: 264 ITISQILEDPWFKKGYKPPVF-----------DEKYETSFDDVDA--------------- 297

Query: 557 PVAHGDGGMHTSVSAPSLVNLEKMHIAAARTTEPRIRRIKSMNAFDIIASSPSFDLSGLF 378
             A GD               E  H+      +P      SMNAF++I+ + + +L  LF
Sbjct: 298 --AFGDS--------------EDRHVKEETEDQPT-----SMNAFELISLNQALNLDNLF 336

Query: 377 EERGE---QLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFEATRNGHKGALAIST 207
           E + E   + RF S  P   II+K+EE A  + F  + K+ ++  E  + G KG L ++T
Sbjct: 337 EAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVAT 396

Query: 206 KIFQLTPELVMVQVCKKAGDTAEYRQF 126
           ++FQ+ P L +V++ K  GDT E+++F
Sbjct: 397 EVFQVAPSLHVVELKKAKGDTLEFQKF 423



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>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
 Frame = -2

Query: 467 TTEPRIRRIKSMNAFDIIASSPSFDLSGLFE--ERGEQLRFVSSAPVNTIISKLEEIAGQ 294
           + E   +R  ++NAF+II+ S  FDLSGLFE  E  E++RF S+   + I  KL EI   
Sbjct: 293 SAEKEKKRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKD 352

Query: 293 VSFTARTKD----CQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF 126
           +    R K+     ++S EAT         +  ++F++ P   MV + K  GDTAEY++ 
Sbjct: 353 LKMKVRKKEHEWRVKMSAEAT--------VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRV 404

Query: 125 CGSELKPGL 99
               ++P L
Sbjct: 405 MKESIRPAL 413



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>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
 Frame = -2

Query: 434 MNAFDIIASSPSFDLSGLFEERGE----QLRFVSSAPVNTIISKLEEIAGQVSFTARTKD 267
           MNAF++I  S   +LS LF+ R +    Q RFVS    + II+ +E +A  + F + T++
Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRN 369

Query: 266 CQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF---CGSELKPGLR 96
            +   E   +   G LA+  +I+++ P L MV V K AG+T EY +F     S+L+  + 
Sbjct: 370 FKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIW 429

Query: 95  GLVDGLPEDGLPPTV 51
              +G+P+  +  T+
Sbjct: 430 RATEGIPKSEILRTI 444



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>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
 Frame = -2

Query: 434 MNAFDIIASSPSFDLSGLFEERG---EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDC 264
           +NAF +I  S   DLSG FE+      ++RF S++    ++ K+E    ++ F+ + K  
Sbjct: 318 INAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHA 377

Query: 263 QVSFEATRNGHKG--ALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELK 108
           ++  +      KG   L+++ ++F++ P L +V++ K  GD+  YRQ     LK
Sbjct: 378 KLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERLLK 431



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>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS5)
           (SOS-interacting protein 4) (SNF1-related kinase 3.22)
          Length = 435

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
 Frame = -2

Query: 461 EPRIRRIKSMNAFDIIASSPSFDLSGLF----EERGEQLRFVSSAPVNTIISKLEEIAGQ 294
           E  +  +KS+NAFD+I+ S   DLSGLF       GE  RF+S      +  ++E  A +
Sbjct: 298 ESSLEAVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFARE 357

Query: 293 VSFTARTKDCQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSE 114
            +   + K  +  +     G  G   I   I +L   LV+V+  ++ GD   Y++    +
Sbjct: 358 ENLRMKKKK-EEEYGFEMEGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGK 416

Query: 113 LKPGLRGLVD 84
           L+  L  + D
Sbjct: 417 LRVQLIRVCD 426



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>PPCK_CHLLI (Q08262) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 618

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 25/118 (21%)
 Frame = +3

Query: 195 LEYLGGYGQRSLVPISCRLEAHLAILGARREANLPRDLLQLGDDGVHRRAGHETQLLAA- 371
           + Y  GY   +L+   C     +A   AR E  L   +L LG   V   AG +  + AA 
Sbjct: 212 VSYSSGYNGNTLLGKKC-FALRIASSMARDEGWLAEHMLILG---VESPAGEKDYVAAAF 267

Query: 372 ----------LLKQPGQIEAWR---GGDDVE--------RVHALDPSYAWLG---GTS 473
                     ++  PG++E W+    GDD+         R+HA++P Y + G   GTS
Sbjct: 268 PSACGKTNFAMIIPPGEMEGWKITTVGDDIRLDQQGKDGRLHAINPEYGFFGVAPGTS 325



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>ZN192_HUMAN (Q15776) Zinc finger protein 192 (LD5-1)|
          Length = 578

 Score = 33.1 bits (74), Expect = 0.92
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = +2

Query: 464 WYELQQCASSPDLPATALTPRCACRRRHVPQERKSLRMMKTWQSRPRSQ 610
           W E+   AS+P+ P T L       +  VPQE +  R M T QS  RSQ
Sbjct: 151 WEEVVHSASAPEPPNTQLQSEATQHKSPVPQESQE-RAMSTSQSPTRSQ 198



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>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1272

 Score = 33.1 bits (74), Expect = 0.92
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 135 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 290
           +FS  +  + +L+HD+  R L  +G   QR  VP+  R EA +   G  REA
Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643



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>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1273

 Score = 33.1 bits (74), Expect = 0.92
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 135 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 290
           +FS  +  + +L+HD+  R L  +G   QR  VP+  R EA +   G  REA
Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643



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>Y047_MYCBO (P59967) Hypothetical protein Mb0047c|
          Length = 367

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 452 IRRIKSMNAFDIIASSPSFDLS-GLFEERGEQLRFVSSAPVNTIISKLEEIAGQVSFTAR 276
           +R +K + AFD+ A    FDLS  +F      ++    AP N I+ +   + G   + A 
Sbjct: 59  VRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYAD 118

Query: 275 T 273
           T
Sbjct: 119 T 119



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>Y046_MYCTU (P71703) Hypothetical protein Rv0046c/MT0052|
          Length = 367

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 452 IRRIKSMNAFDIIASSPSFDLS-GLFEERGEQLRFVSSAPVNTIISKLEEIAGQVSFTAR 276
           +R +K + AFD+ A    FDLS  +F      ++    AP N I+ +   + G   + A 
Sbjct: 59  VRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYAD 118

Query: 275 T 273
           T
Sbjct: 119 T 119



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>DYIN_DROME (Q24246) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic|
           dynein intermediate chain) (Protein short wing)
          Length = 663

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = -2

Query: 494 EKMHIAAARTTEPRIRRIKSMNAFDIIASSPSFDLSGLFEER---GEQLRFVSSAPVNTI 324
           +K  +AA R  + R RR K +   +  A           ++R    E L  +  APV+ +
Sbjct: 10  KKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQRKDLDEMLSSLGVAPVSEV 69

Query: 323 ISKLEEIAGQVSFTARTKDCQVSFEATRNGHKG 225
           +S L  +    S  + T+    S +AT NG  G
Sbjct: 70  LSSLSSVNSMTSDNSNTQTPDASLQATVNGQSG 102



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>SYN_UREPA (Q9PQC6) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 454

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -2

Query: 485 HIAAARTTEPRIRRIKSMNAFDIIASSPSFDLSGLFEERGEQLRFVSSAPVNTIISKLEE 306
           H+A     EP +  +      DI+       +  + E+  ++L F++      +I KL++
Sbjct: 227 HLAEFWMIEPEMAFVDLKGMQDIVEDLVKHVIKAVLEKNQQELEFLAQRNDENLIKKLQK 286

Query: 305 IAGQVSFTARTKDC-QVSFEATRNGHK 228
           +          KD  ++  +A +NGH+
Sbjct: 287 VVESKFERIEYKDAVKILADAVKNGHQ 313



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>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)|
          Length = 1401

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 63   KAILRQAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDELRRELEYLGGYGQRSLV 233
            K +++  I  T +   + TA ++ + +  S  + YL     +   EY   YG+RSL+
Sbjct: 1155 KLLIKYGIDVTIRNAYDKTALDIAIDAKFSNIVEYLKTKSGKFRREYKSSYGERSLL 1211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,719,574
Number of Sequences: 219361
Number of extensions: 1901430
Number of successful extensions: 7688
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7671
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7706249192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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