| Clone Name | rbaal27l08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E13, full insert sequence Length = 4021 Score = 307 bits (155), Expect = 2e-80 Identities = 238/265 (89%), Gaps = 3/265 (1%) Strand = Plus / Minus Query: 182 caggggaagagcaaaaacgaagcctccctgtggatcctcctgttgtctaccagcatgatc 241 |||||||| | |||||| ||||||||||||||||||||||| | |||| || |||| Sbjct: 3730 caggggaacaacaaaaatgaagcctccctgtggatcctcctat---ctacaagtgcgatc 3674 Query: 242 ttgtccagcttcgccttgcaccactgcagctggtcgccggtgatcctcggcatcctcagc 301 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| Sbjct: 3673 ttgtccagcttcgccttgcaccactgcagctgctcgctggtgatcctcggcatccgcagg 3614 Query: 302 acccgcgccaccagccgcatgtccacctgcgagaagaagaggttctggtccgacctgtcc 361 ||||| ||||| ||||||||||| |||||||||||||||||| |||||| | | ||||| Sbjct: 3613 acccgtgccacgagccgcatgtcgacctgcgagaagaagaggctctggttcaaggtgtcc 3554 Query: 362 tccttgggcttcttgaacttcttcacaatgcagttccctgtcctcagcagatccttcagc 421 |||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 3553 tccttgggcttcttgaacttcttcactatgcagttgccggtcctcaggagatccttcagc 3494 Query: 422 ctcttctctttcttctgtaacgtgg 446 ||||||||||||||||||||||||| Sbjct: 3493 ctcttctctttcttctgtaacgtgg 3469 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 87 ctacaagccgtggattacatggtgaagat 115 |||||||||||||||||||||||| |||| Sbjct: 3820 ctacaagccgtggattacatggtggagat 3792
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 283 bits (143), Expect = 3e-73 Identities = 226/253 (89%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 182 caggggaagagcaaaaacgaagcctccctgtggatcctcctgttgtctaccagcatgatc 241 |||||||| | |||||| ||||||||||||||||||||||| | |||| || |||| Sbjct: 14640101 caggggaacaacaaaaatgaagcctccctgtggatcctcctat---ctacaagtgcgatc 14640157 Query: 242 ttgtccagcttcgccttgcaccactgcagctggtcgccggtgatcctcggcatcctcagc 301 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| Sbjct: 14640158 ttgtccagcttcgccttgcaccactgcagctgctcgctggtgatcctcggcatccgcagg 14640217 Query: 302 acccgcgccaccagccgcatgtccacctgcgagaagaagaggttctggtccgacctgtcc 361 ||||| ||||| ||||||||||| |||||||||||||||||| |||||| | | ||||| Sbjct: 14640218 acccgtgccacgagccgcatgtcgacctgcgagaagaagaggctctggttcaaggtgtcc 14640277 Query: 362 tccttgggcttcttgaacttcttcacaatgcagttccctgtcctcagcagatccttcagc 421 |||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 14640278 tccttgggcttcttgaacttcttcactatgcagttgccggtcctcaggagatccttcagc 14640337 Query: 422 ctcttctctttct 434 ||||||||||||| Sbjct: 14640338 ctcttctctttct 14640350 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 87 ctacaagccgtggattacatggtgaagat 115 |||||||||||||||||||||||| |||| Sbjct: 14640011 ctacaagccgtggattacatggtggagat 14640039
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 283 bits (143), Expect = 3e-73 Identities = 226/253 (89%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 182 caggggaagagcaaaaacgaagcctccctgtggatcctcctgttgtctaccagcatgatc 241 |||||||| | |||||| ||||||||||||||||||||||| | |||| || |||| Sbjct: 61768 caggggaacaacaaaaatgaagcctccctgtggatcctcctat---ctacaagtgcgatc 61824 Query: 242 ttgtccagcttcgccttgcaccactgcagctggtcgccggtgatcctcggcatcctcagc 301 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| Sbjct: 61825 ttgtccagcttcgccttgcaccactgcagctgctcgctggtgatcctcggcatccgcagg 61884 Query: 302 acccgcgccaccagccgcatgtccacctgcgagaagaagaggttctggtccgacctgtcc 361 ||||| ||||| ||||||||||| |||||||||||||||||| |||||| | | ||||| Sbjct: 61885 acccgtgccacgagccgcatgtcgacctgcgagaagaagaggctctggttcaaggtgtcc 61944 Query: 362 tccttgggcttcttgaacttcttcacaatgcagttccctgtcctcagcagatccttcagc 421 |||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 61945 tccttgggcttcttgaacttcttcactatgcagttgccggtcctcaggagatccttcagc 62004 Query: 422 ctcttctctttct 434 ||||||||||||| Sbjct: 62005 ctcttctctttct 62017 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 87 ctacaagccgtggattacatggtgaagat 115 |||||||||||||||||||||||| |||| Sbjct: 61678 ctacaagccgtggattacatggtggagat 61706
>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence Length = 132140 Score = 272 bits (137), Expect = 1e-69 Identities = 226/255 (88%), Gaps = 3/255 (1%) Strand = Plus / Plus Query: 180 agcaggggaagagcaaaaacgaagcctccctgtggatcctcctgttgtctaccagcatga 239 ||||||| || | |||||| |||||||||||||||||| |||| | ||||||| | || Sbjct: 70048 agcagggaaacaacaaaaatgaagcctccctgtggatcttcctat---ctaccagtacga 70104 Query: 240 tcttgtccagcttcgccttgcaccactgcagctggtcgccggtgatcctcggcatcctca 299 ||||||| ||||| ||| |||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 70105 tcttgtcgagcttggccctgcaccactgcagctgctcgctggtgatcctgggcatcctca 70164 Query: 300 gcacccgcgccaccagccgcatgtccacctgcgagaagaagaggttctggtccgacctgt 359 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 70165 gcacccgcgccaccagcttcatgtccacctgcgagaagaagaggttctggttggacctgt 70224 Query: 360 cctccttgggcttcttgaacttcttcacaatgcagttccctgtcctcagcagatccttca 419 |||||||||||||||| ||||||||| | |||||||| || ||||| ||||| ||||| | Sbjct: 70225 cctccttgggcttcttaaacttcttcgcgatgcagttgcccgtcctgagcaggtccttga 70284 Query: 420 gcctcttctctttct 434 ||||||||||||||| Sbjct: 70285 gcctcttctctttct 70299 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 479 gggtcctggagctcgacgtgggcggtagacaggcccttcaggaccgatg 527 ||||||||||||||||||| | | | ||||||||||| || ||||||| Sbjct: 70418 gggtcctggagctcgacgttgctgctcgacaggcccttgagcaccgatg 70466 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 540 tgtcggccttgatgaattcccaaagaatgtgcatcg 575 |||||||||||||||| ||||| || | |||||||| Sbjct: 70497 tgtcggccttgatgaactcccacaggacgtgcatcg 70532
>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence Length = 253001 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaatac 86 ||||||||||||||||||||||||| Sbjct: 150406 tgatgaagaagaagaagaaaaatac 150430
>gb|AC120880.8| Mus musculus chromosome 3, clone RP24-553A12, complete sequence Length = 147280 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 57 gaaactgatgaagaagaagaagaaaaa 83 |||||||| |||||||||||||||||| Sbjct: 77402 gaaactgaagaagaagaagaagaaaaa 77428
>ref|NM_179593.2| Arabidopsis thaliana RIE1 (RING-FINGER PROTEIN FOR EMBRYOGENESIS); ubiquitin-protein ligase/ zinc ion binding AT2G01735 (RIE1) mRNA, complete cds Length = 2102 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 61 ctgatgaagaagaagaagaaaaa 83 ||||||||||||||||||||||| Sbjct: 127 ctgatgaagaagaagaagaaaaa 105
>gb|AY357948.1| Arabidopsis thaliana ecotype Landsberg erecta YDA (At1g63700) gene, complete cds Length = 4568 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaaa 83 ||||||||||||||||||||||| Sbjct: 4399 ctgatgaagaagaagaagaaaaa 4421
>gb|AY168924.1| Arabidopsis thaliana RES protein (RES) mRNA, complete cds Length = 1306 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 61 ctgatgaagaagaagaagaaaaa 83 ||||||||||||||||||||||| Sbjct: 127 ctgatgaagaagaagaagaaaaa 105
>emb|BX119918.18| Zebrafish DNA sequence from clone CH211-202H22 in linkage group 1, complete sequence Length = 141342 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaata 85 ||||||||||||||||||||||| Sbjct: 88265 gatgaagaagaagaagaaaaata 88287
>gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map rga, complete sequence Length = 89138 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaaa 83 ||||||||||||||||||||||| Sbjct: 34848 ctgatgaagaagaagaagaaaaa 34870
>ref|XM_682043.1| PREDICTED: Danio rerio hypothetical protein LOC558776 (LOC558776), mRNA Length = 1705 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaata 85 ||||||||||||||||||||||| Sbjct: 1041 gatgaagaagaagaagaaaaata 1063
>gb|AF361321.1|AF361321 Pisum sativum polygalacturonase (Ppg1) mRNA, complete cds Length = 1273 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaat 84 ||||||||||||||||||||||| Sbjct: 1198 tgatgaagaagaagaagaaaaat 1176
>emb|CR931784.7| Zebrafish DNA sequence from clone DKEY-237H12 in linkage group 14, complete sequence Length = 223042 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaata 85 ||||||||||||||||||||||| Sbjct: 135944 gatgaagaagaagaagaaaaata 135922
>ref|NM_111807.1| Arabidopsis thaliana unknown protein AT3G09730 mRNA, complete cds Length = 1218 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 293 tgatgaagaagaagaagaaaaa 314
>ref|XM_633918.1| Dictyostelium discoideum calreticulin (DDB0191384), partial mRNA Length = 1275 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 aagaaactgatgaagaagaagaagaa 80 ||||| |||||||||||||||||||| Sbjct: 1163 aagaagctgatgaagaagaagaagaa 1188
>gb|AC167694.2| Daphnia pulex clone JGIAZSN-5P22, complete sequence Length = 35398 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 2919 gaagaagaagaagaaaaatacc 2940
>ref|XM_514438.1| PREDICTED: Pan troglodytes similar to heat shock protein 1, beta; heat shock protein, 84 kDa 1; heat shock 90kDa protein 1, beta (LOC458008), mRNA Length = 1380 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaa 82 |||||||||||||||||||||| Sbjct: 500 ctgatgaagaagaagaagaaaa 521
>gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence Length = 163442 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatacctaca 91 |||||||||||||||||| ||||||| Sbjct: 3301 gaagaagaagaagaaaaaaacctaca 3276
>ref|XM_705047.1| Candida albicans SC5314 hypothetical protein (CaO19.8532), mRNA Length = 330 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 55 aagaaactgatgaagaagaagaagaa 80 ||||||||| |||||||||||||||| Sbjct: 236 aagaaactgttgaagaagaagaagaa 211 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 187 tgatgaagaagaagaagaaa 168
>ref|XM_987000.1| PREDICTED: Mus musculus protocadherin 11 X-linked, transcript variant 1 (Pcdh11x), mRNA Length = 4480 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>ref|XM_987138.1| PREDICTED: Mus musculus protocadherin 11 X-linked, transcript variant 5 (Pcdh11x), mRNA Length = 4381 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>ref|XM_987069.1| PREDICTED: Mus musculus protocadherin 11 X-linked, transcript variant 3 (Pcdh11x), mRNA Length = 4462 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>ref|XM_987096.1| PREDICTED: Mus musculus protocadherin 11 X-linked, transcript variant 4 (Pcdh11x), mRNA Length = 4492 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>ref|XM_987033.1| PREDICTED: Mus musculus protocadherin 11 X-linked, transcript variant 2 (Pcdh11x), mRNA Length = 4498 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>ref|XM_911050.2| PREDICTED: Mus musculus protocadherin 11 X-linked (Pcdh11x), mRNA Length = 4480 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>ref|XM_973857.1| PREDICTED: Mus musculus protocadherin 11 X-linked (Pcdh11x), mRNA Length = 4492 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 2966 tgatgaagaagaagaagaaaaa 2987
>emb|Z75540.1|CEF37D6 Caenorhabditis elegans Cosmid F37D6, complete sequence Length = 29363 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 gatcttgtccagcttcgccttg 259 |||||||||||||||||||||| Sbjct: 11345 gatcttgtccagcttcgccttg 11324
>ref|XM_666445.1| Plasmodium berghei strain ANKA hypothetical protein (PB000855.01.0) partial mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 aagaaactgatgaagaagaagaagaa 80 |||||||||| ||||||||||||||| Sbjct: 269 aagaaactgaggaagaagaagaagaa 294
>gb|AC130653.31| Medicago truncatula clone mth1-13b3, complete sequence Length = 166135 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 80792 gaagaagaagaagaaaaatacc 80813
>emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 on chromosome 1p35-36.3 Contains part of a novel gene, complete sequence Length = 96608 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 32825 gaagaagaagaagaaaaatacc 32846
>emb|AL365440.13| Human DNA sequence from clone RP11-144L1 on chromosome 1 Contains the OR10T1P olfactory receptor, family 10, subfamily T, member 1 pseudogene, an etoposide induced 2.4 mRNA (EI24) pseudogene, the OR10K1 gene for olfactory receptor, family 10, subfamily K, member 1, the OR10R2 gene for olfactory receptor, family 10, subfamily R, member 2, the OR10R3P olfactory receptor, family 10, subfamily R, member 3 pseudogene, a novel gene, the OR10R1P olfactory receptor, family 10, subfamily R, member 1 pseudogene, a heat shock 90kDa protein 1, alpha (HSPCA) pseudogene and the OR6Y1 gene for olfactory receptor, family 6, subfamily Y, member 1, complete sequence Length = 126954 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaa 82 |||||||||||||||||||||| Sbjct: 102218 ctgatgaagaagaagaagaaaa 102239
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaata 85 |||||||||||||||||||||| Sbjct: 120190 atgaagaagaagaagaaaaata 120169
>emb|X96770.1|SCLACHXVI S.cerevisiae chromosome XVI, left arm DNA Length = 55786 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 25430 tgatgaagaagaagaagaaaaa 25409
>emb|AJ286830.1|EEU286830 Erinaceus europaeus partial tnfa gene for tumor necrosis factor precursor, exon 1 Length = 646 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 cttcagcctcttctctttcttc 436 |||||||||||||||||||||| Sbjct: 70 cttcagcctcttctctttcttc 91
>gb|AC148776.12| Medicago truncatula clone mth2-39g6, complete sequence Length = 109378 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 78862 gaagaagaagaagaaaaatacc 78841
>gb|AC090916.3| Homo sapiens chromosome 18, clone RP11-862C6, complete sequence Length = 197963 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 83637 gaagaagaagaagaaaaatacc 83658
>ref|NG_005218.1| Homo sapiens heat shock protein 90kDa alpha (cytosolic), class A member 3 (pseudogene) (HSP90AA3P) on chromosome 1 Length = 3010 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaa 82 |||||||||||||||||||||| Sbjct: 886 ctgatgaagaagaagaagaaaa 907
>emb|AJ564976.1|MOU564976 Mus musculus mRNA for protocadherin (PCDHX gene) Length = 3968 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 3033 tgatgaagaagaagaagaaaaa 3054
>gb|AC046202.5| Homo sapiens chromosome 18, clone RP11-318I15, complete sequence Length = 179210 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 39008 gaagaagaagaagaaaaatacc 38987
>ref|NM_060343.1| Caenorhabditis elegans F37D6.3 (F37D6.3) mRNA, complete cds Length = 510 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 gatcttgtccagcttcgccttg 259 |||||||||||||||||||||| Sbjct: 247 gatcttgtccagcttcgccttg 226
>gb|AC024751.2| Caenorhabditis elegans cosmid Y18H1A, complete sequence Length = 89984 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 84309 tgatgaagaagaagaagaaaaa 84330
>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete sequence Length = 107603 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 82683 tgatgaagaagaagaagaaaaa 82704
>emb|BX825173.1|CNS0A4SD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZD05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1178 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 301 tgatgaagaagaagaagaaaaa 322
>emb|BX005446.8| Mouse DNA sequence from clone RP23-20G23 on chromosome X, complete sequence Length = 159892 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 68107 tgatgaagaagaagaagaaaaa 68128
>emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chromosome 2, complete sequence Length = 124244 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 14579 gaagaagaagaagaaaaatacc 14600
>emb|Z73514.1|SCYPL158C S.cerevisiae chromosome XVI reading frame ORF YPL158c Length = 3145 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 591 tgatgaagaagaagaagaaaaa 570
>gb|AY861430.1| Mus musculus protocadherin 11 isoform 2 (Pcdh11) mRNA, partial cds, alternatively spliced Length = 579 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 95 tgatgaagaagaagaagaaaaa 116
>gb|AY861429.1| Mus musculus protocadherin 11 isoform 6 (Pcdh11) mRNA, partial cds, alternatively spliced Length = 1461 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 95 tgatgaagaagaagaagaaaaa 116
>gb|AY861428.1| Mus musculus protocadherin 11 isoform 8 (Pcdh11) mRNA, partial cds, alternatively spliced Length = 1491 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 95 tgatgaagaagaagaagaaaaa 116
>gb|AY861427.1| Mus musculus protocadherin 11 isoform 10 (Pcdh11) mRNA, partial cds, alternatively spliced Length = 1605 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 95 tgatgaagaagaagaagaaaaa 116
>gb|AY861426.1| Mus musculus protocadherin 11 isoform 9 (Pcdh11) mRNA, partial cds, alternatively spliced Length = 1635 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaaa 83 |||||||||||||||||||||| Sbjct: 95 tgatgaagaagaagaagaaaaa 116
>emb|CT573026.5| M.truncatula DNA sequence from clone MTH2-39M4 on chromosome 3, complete sequence Length = 109386 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatacc 87 |||||||||||||||||||||| Sbjct: 78864 gaagaagaagaagaaaaatacc 78843
>gb|U36937.1|DDU36937 Dictyostelium discoideum calreticulin mRNA, complete cds Length = 1363 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 aagaaactgatgaagaagaagaagaa 80 ||||| |||||||||||||||||||| Sbjct: 1208 aagaagctgatgaagaagaagaagaa 1233
>dbj|AP002533.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 2/4 Length = 300000 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaa 82 |||||||||||||||||||||| Sbjct: 49601 ctgatgaagaagaagaagaaaa 49622
>dbj|AB045359.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:456n8, complete sequence Length = 161318 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaa 82 |||||||||||||||||||||| Sbjct: 102124 ctgatgaagaagaagaagaaaa 102145
>dbj|AB043677.1| Equus caballus Hsp90 alpha mRNA for heat shock protein 90 alpha, partial cds Length = 2157 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaaaa 82 |||||||||||||||||||||| Sbjct: 755 ctgatgaagaagaagaagaaaa 776
>gb|AC109251.9| Mus musculus chromosome 1, clone RP23-350B3, complete sequence Length = 188481 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgaagaagaagaagaaaaata 85 ||||||||||||||||||||| Sbjct: 99141 tgaagaagaagaagaaaaata 99121
>gb|AC115877.13| Mus musculus chromosome 15, clone RP24-358H21, complete sequence Length = 169136 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 actgatgaagaagaagaagaa 80 ||||||||||||||||||||| Sbjct: 30545 actgatgaagaagaagaagaa 30525
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 agcacccgcgccaccagccgc 319 ||||||||||||||||||||| Sbjct: 549429 agcacccgcgccaccagccgc 549409
>gb|AY751536.1| Schistocerca gregaria Sparc (Sparc) mRNA, complete cds Length = 945 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 181 gatgaagaagaagaagaaaaa 201
>gb|AC150429.2| Branchiostoma floridae clone CH302-92H15, complete sequence Length = 112163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 109928 gatgaagaagaagaagaaaaa 109948
>ref|XM_637282.1| Dictyostelium discoideum hypothetical protein (DDB0205464), partial mRNA Length = 2472 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 2203 gatgaagaagaagaagaaaaa 2223
>gb|AC131919.13| Mus musculus chromosome 15, clone RP24-239J20, complete sequence Length = 177896 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 actgatgaagaagaagaagaa 80 ||||||||||||||||||||| Sbjct: 20199 actgatgaagaagaagaagaa 20219
>gb|AC117790.23| Mus musculus chromosome 19, clone RP24-548O2, complete sequence Length = 197551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 gaaactgatgaagaagaagaa 77 ||||||||||||||||||||| Sbjct: 1336 gaaactgatgaagaagaagaa 1356
>gb|AC142270.4| Mus musculus BAC clone RP24-115G23 from chromosome 3, complete sequence Length = 170870 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 tccctgtcctcagcagatccttcag 420 |||||| |||||||||||||||||| Sbjct: 56240 tccctgccctcagcagatccttcag 56216
>ref|XM_711515.1| Candida albicans SC5314 ubiquitin-specific protease (CaO19_7367), mRNA Length = 2415 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 2062 gatgaagaagaagaagaaaaa 2082
>ref|XM_705044.1| Candida albicans SC5314 hypothetical protein (CaO19.917), mRNA Length = 330 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 aagaaactgatgaagaagaagaaga 79 ||||||||| ||||||||||||||| Sbjct: 236 aagaaactgttgaagaagaagaaga 212 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 187 tgatgaagaagaagaagaaa 168
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence Length = 218698 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gtgtaagctgtgtagagaacc 46 ||||||||||||||||||||| Sbjct: 57963 gtgtaagctgtgtagagaacc 57983
>emb|CR854931.8| Zebrafish DNA sequence from clone DKEY-30P2 in linkage group 14, complete sequence Length = 203332 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 136675 gatgaagaagaagaagaaaaa 136695
>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence Length = 312488 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 55 aagaaactgatgaagaagaagaagaaaaa 83 |||||| ||| |||||||||||||||||| Sbjct: 238659 aagaaaatgaagaagaagaagaagaaaaa 238631
>emb|CR854933.8| Zebrafish DNA sequence from clone DKEY-48H17 in linkage group 14, complete sequence Length = 190712 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 70441 gatgaagaagaagaagaaaaa 70421
>gb|AC123929.4| Mus musculus BAC clone RP24-434E14 from chromosome 12, complete sequence Length = 166035 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 23832 gatgaagaagaagaagaaaaa 23812
>gb|AC127347.4| Mus musculus BAC clone RP23-54N12 from chromosome 18, complete sequence Length = 220483 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgaagaagaagaagaaaaata 85 ||||||||||||||||||||| Sbjct: 148769 tgaagaagaagaagaaaaata 148749
>gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome 7, complete sequence Length = 196195 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 181894 gatgaagaagaagaagaaaaa 181874
>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete sequence Length = 184128 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatacctac 90 ||||||||||||||| ||||||||| Sbjct: 64378 gaagaagaagaagaagaatacctac 64354
>ref|XM_644803.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (262.t00005) partial mRNA Length = 771 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 aagaaactgatgaagaagaagaaga 79 |||||||||| |||||||||||||| Sbjct: 545 aagaaactgaagaagaagaagaaga 569
>ref|XM_718879.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03770) partial mRNA Length = 1909 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaa 82 ||||||||||||||||||||| Sbjct: 580 tgatgaagaagaagaagaaaa 600
>ref|XM_719572.1| Plasmodium yoelii yoelii str. 17XNL mature parasite-infected erythrocyte surface antigen (PY00474) partial mRNA Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 55 aagaaactgatgaagaagaagaagaaaaa 83 |||||| ||||||||||||||| |||||| Sbjct: 929 aagaaaatgatgaagaagaagatgaaaaa 957 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 55 aagaaactgatgaagaagaagaagaaaaa 83 |||||| ||||||||||||||| |||||| Sbjct: 881 aagaaaatgatgaagaagaagatgaaaaa 909
>ref|XM_725549.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02725) partial mRNA Length = 990 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 943 gatgaagaagaagaagaaaaa 963
>gb|AC115785.9| Mus musculus chromosome 12, clone RP23-170K17, complete sequence Length = 261721 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 55 aagaaactgatgaagaagaagaagaaaaa 83 |||||| ||| |||||||||||||||||| Sbjct: 44872 aagaaaatgaagaagaagaagaagaaaaa 44844
>gb|AC109805.8| Mus musculus chromosome 3, clone RP23-91D14, complete sequence Length = 171006 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 tccctgtcctcagcagatccttcag 420 |||||| |||||||||||||||||| Sbjct: 54358 tccctgccctcagcagatccttcag 54334
>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence Length = 193170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 190582 gatgaagaagaagaagaaaaa 190602
>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence Length = 218079 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatacctac 90 ||||||||||||||| ||||||||| Sbjct: 163585 gaagaagaagaagaagaatacctac 163561
>ref|XM_670675.1| Plasmodium berghei strain ANKA hypothetical protein (PB000064.03.0) partial mRNA Length = 1308 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaaa 82 ||||||||||||||||||||| Sbjct: 1221 tgatgaagaagaagaagaaaa 1241
>ref|XM_674046.1| Plasmodium berghei strain ANKA hypothetical protein (PB001019.00.0) partial mRNA Length = 741 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 655 gaagaagaagaagaaaaatac 675
>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence Length = 113210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 3947 gaagaagaagaagaaaaatac 3967
>gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosome 3, complete sequence Length = 228648 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 tccctgtcctcagcagatccttcag 420 |||||| |||||||||||||||||| Sbjct: 9550 tccctgccctcagcagatccttcag 9574
>emb|AL137020.13| Human DNA sequence from clone RP11-146B14 on chromosome 9 Contains part of the JMJD2C gene for jumonji domain containing 2C, complete sequence Length = 182231 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 123178 gatgaagaagaagaagaaaaa 123158
>emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chromosome 1q31.1-31.3, complete sequence Length = 158745 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 89373 gatgaagaagaagaagaaaaa 89353
>gb|AC120241.5| Rattus norvegicus X BAC CH230-390I1 (Children's Hospital Oakland Research Institute) complete sequence Length = 174991 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 aaaaaatcagacatgatttat 166 ||||||||||||||||||||| Sbjct: 87853 aaaaaatcagacatgatttat 87873
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 114120 gatgaagaagaagaagaaaaa 114140
>emb|AL670002.1|NCB24G3 Neurospora crassa DNA linkage group II BAC clone B24G3 Length = 77166 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 55966 gatgaagaagaagaagaaaaa 55986
>emb|AL513409.1|NCB11O9 Neurospora crassa DNA linkage group II BAC clone B11O9 Length = 71085 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaa 82 ||||||||||||||||||||| Sbjct: 41491 tgatgaagaagaagaagaaaa 41471
>emb|AL669954.6| Mouse DNA sequence from clone RP23-456O18 on chromosome 11 Contains the 3' end of the Rai1 gene for retinoic acid induced 1, the Srebf1 gene for sterol regulatory element binding factor 1, the 3' end of the gene for the likely ortholog of H. sapiens target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a novel gene and two CpG islands, complete sequence Length = 119279 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 agcagatccttcagcctcttc 427 ||||||||||||||||||||| Sbjct: 19782 agcagatccttcagcctcttc 19802
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 ccttgatgaattcccaaagaa 566 ||||||||||||||||||||| Sbjct: 184733 ccttgatgaattcccaaagaa 184713
>gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete sequence Length = 107180 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 96951 gaagaagaagaagaaaaatac 96971
>gb|AF351248.1| Gossypium hirsutum clone JESPR6 microsatellite sequence Length = 234 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 226 gatgaagaagaagaagaaaaa 206
>gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complete sequence Length = 167791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaat 84 ||||||||||||||||||||| Sbjct: 104473 atgaagaagaagaagaaaaat 104493
>gb|AC078993.20| Homo sapiens Xp BAC RP11-431J24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 214001 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaat 84 ||||||||||||||||||||| Sbjct: 183301 atgaagaagaagaagaaaaat 183321
>gb|DQ400449.1| Homo sapiens complement component 5 (C5) gene, complete cds Length = 101824 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 69609 gatgaagaagaagaagaaaaa 69629
>gb|AC157322.5| Mus musculus chromosome 19, clone RP23-241E11, complete sequence Length = 201134 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 gaaactgatgaagaagaagaa 77 ||||||||||||||||||||| Sbjct: 113639 gaaactgatgaagaagaagaa 113619
>gb|AC158360.4| Mus musculus BAC clone RP23-220E13 from chromosome 8, complete sequence Length = 202395 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 3722 gaagaagaagaagaaaaatac 3702
>emb|BX548166.7| Zebrafish DNA sequence from clone CH211-280G5 in linkage group 10, complete sequence Length = 166449 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 98026 gatgaagaagaagaagaaaaa 98046
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 25833004 gatgaagaagaagaagaaaaa 25832984 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 26689750 gaagaagaagaagaaaaata 26689769
>gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, complete sequence Length = 201464 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 153562 gaagaagaagaagaaaaatac 153582
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence Length = 253132 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 249751 gatgaagaagaagaagaaaaa 249771
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 52462 gaagaagaagaagaaaaatac 52442 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaataccta 89 ||||||||||||||||| |||||| Sbjct: 15592 gaagaagaagaagaaaactaccta 15569
>gb|AC096624.23| Mus musculus strain C57BL/6J chromosome 11 clone rp23-326m22, complete sequence Length = 227682 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 agcagatccttcagcctcttc 427 ||||||||||||||||||||| Sbjct: 113133 agcagatccttcagcctcttc 113113
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 69897 gaagaagaagaagaaaaatac 69917
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 185363 gatgaagaagaagaagaaaaa 185383
>gb|AC006430.22|AC006430 Homo sapiens chromosome 9, clone RP11-525G7, complete sequence Length = 194799 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 96663 gatgaagaagaagaagaaaaa 96643
>gb|AC154104.2| Mus musculus BAC clone RP24-555C7 from 7, complete sequence Length = 191855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 45284 gatgaagaagaagaagaaaaa 45264
>gb|AY729861.1| Plectospira myriandra heat shock protein 90 gene, partial cds Length = 1725 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 613 gatgaagaagaagaagaaaaa 633
>emb|BX470233.4| Mouse DNA sequence from clone RP23-14N14 on chromosome 4, complete sequence Length = 3615 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 3233 gaagaagaagaagaaaaatac 3253
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 25761180 gatgaagaagaagaagaaaaa 25761160 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 26617919 gaagaagaagaagaaaaata 26617938
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 agaaactgatgaagaagaaga 76 ||||||||||||||||||||| Sbjct: 160863 agaaactgatgaagaagaaga 160843
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 54455 gatgaagaagaagaagaaaaa 54435
>gb|AC004167.1|AC004167 Homo sapiens chromosome 17, clone HRPC1096F1, complete sequence Length = 124876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 77036 gaagaagaagaagaaaaatac 77016
>gb|AC004103.1|AC004103 Homo sapiens Xp22 BAC GS-619J3 (Genome Systems Human BAC library) complete sequence Length = 144368 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaat 84 ||||||||||||||||||||| Sbjct: 99801 atgaagaagaagaagaaaaat 99821
>gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, complete sequence Length = 205622 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 86516 gaagaagaagaagaaaaatac 86496
>gb|AC132410.4| Mus musculus BAC clone RP23-348E10 from 8, complete sequence Length = 175530 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 135439 gatgaagaagaagaagaaaaa 135459
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaaa 83 ||||||||||||||||||||| Sbjct: 18919 gatgaagaagaagaagaaaaa 18939
>emb|AL929568.12| Zebrafish DNA sequence from clone CH211-59K8, complete sequence Length = 185257 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 111654 gaagaagaagaagaaaaatac 111634
>emb|AL627312.12| Mouse DNA sequence from clone RP23-276H1 on chromosome 11, complete sequence Length = 178178 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaa 82 ||||||||||||||||||||| Sbjct: 96284 tgatgaagaagaagaagaaaa 96264
>emb|AL929422.6| Mouse DNA sequence from clone RP24-234H23 on chromosome 4, complete sequence Length = 52881 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaatac 86 ||||||||||||||||||||| Sbjct: 1618 gaagaagaagaagaaaaatac 1638
>gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, complete sequence Length = 169326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgaagaagaagaagaaaaata 85 ||||||||||||||||||||| Sbjct: 125624 tgaagaagaagaagaaaaata 125644
>gb|AC155157.1| Medicago truncatula chromosome 2 BAC clone mth2-53f22, complete sequence Length = 129201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 81894 ctgatgaagaagaagaagaa 81913
>gb|U80437.2| Caenorhabditis elegans cosmid C43E11, complete sequence Length = 44096 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 30396 gatgaagaagaagaagaaaa 30415
>ref|NM_133433.2| Homo sapiens Nipped-B homolog (Drosophila) (NIPBL), transcript variant A, mRNA Length = 9717 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 8264 ctgatgaagaagaagaagaa 8283
>ref|NM_015384.3| Homo sapiens Nipped-B homolog (Drosophila) (NIPBL), transcript variant B, mRNA Length = 8648 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 8264 ctgatgaagaagaagaagaa 8283
>gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172853 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 73714 gaagaagaagaagaaaaata 73733
>ref|NM_124599.3| Arabidopsis thaliana unknown protein AT5G52200 mRNA, complete cds Length = 786 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 309 ctgatgaagaagaagaagaa 328
>ref|NM_106164.3| Arabidopsis thaliana BZR1 (BRASSINAZOLE-RESISTANT 1); transcription regulator AT1G75080 (BZR1) transcript variant AT1G75080.1 mRNA, complete cds Length = 1563 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 actgatgaagaagaagaaga 79 |||||||||||||||||||| Sbjct: 127 actgatgaagaagaagaaga 108
>ref|NM_202416.1| Arabidopsis thaliana BZR1 (BRASSINAZOLE-RESISTANT 1) AT1G75080 (BZR1) transcript variant AT1G75080.2 mRNA, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 actgatgaagaagaagaaga 79 |||||||||||||||||||| Sbjct: 127 actgatgaagaagaagaaga 108
>ref|NM_101229.2| Arabidopsis thaliana ATPSK1 (PHYTOSULFOKINE 1 PRECURSOR) AT1G13590 (ATPSK1) mRNA, complete cds Length = 422 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 5 gaagaagaagaagaaaaata 24
>ref|NM_118868.3| Arabidopsis thaliana unknown protein AT4G27340 mRNA, complete cds Length = 2030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 actgatgaagaagaagaaga 79 |||||||||||||||||||| Sbjct: 469 actgatgaagaagaagaaga 488
>ref|NM_100948.2| Arabidopsis thaliana unknown protein AT1G10720 mRNA, complete cds Length = 1615 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gaaactgatgaagaagaagaagaa 80 ||||| |||||||||||||||||| Sbjct: 487 gaaacagatgaagaagaagaagaa 510
>ref|NM_105421.1| Arabidopsis thaliana unknown protein AT1G67540 mRNA, complete cds Length = 699 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 34 ctgatgaagaagaagaagaa 53
>ref|NM_125987.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G65900 mRNA, complete cds Length = 2223 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 383 gaagaagaagaagaaaaata 402 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 305 gaagaagaagaagaaaaata 324
>ref|NM_180394.1| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.2 mRNA, complete cds Length = 1686 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 347 gaagaagaagaagaaaaata 366
>ref|NM_001035821.1| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.3 mRNA, complete cds Length = 1594 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 255 gaagaagaagaagaaaaata 274
>ref|NM_115862.2| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.1 mRNA, complete cds Length = 1620 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 281 gaagaagaagaagaaaaata 300
>ref|NM_102468.1| Arabidopsis thaliana Ran GTPase binding AT1G27060 mRNA, complete cds Length = 1161 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 26 ctgatgaagaagaagaagaa 45
>ref|NM_202461.1| Arabidopsis thaliana DNA binding AT1G80270 transcript variant AT1G80270.2 mRNA, complete cds Length = 2044 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 391 ctgatgaagaagaagaagaa 410
>ref|NM_106676.2| Arabidopsis thaliana DNA binding AT1G80270 transcript variant AT1G80270.1 mRNA, complete cds Length = 2071 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 418 ctgatgaagaagaagaagaa 437
>ref|NM_117172.2| Arabidopsis thaliana unknown protein AT4G11020 mRNA, complete cds Length = 568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaagaagaagaagaaaaat 84 |||||||||||||||||||| Sbjct: 42 tgaagaagaagaagaaaaat 61
>gb|AY800612.1| Arabidopsis thaliana clone H0000001186 hypothetical protein (AT1G67540) mRNA, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 322 ctgatgaagaagaagaagaa 341
>ref|XM_639066.1| Dictyostelium discoideum hypothetical protein (DDB0203202), partial mRNA Length = 1290 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 385 gatgaagaagaagaagaaaa 404
>ref|XM_642112.1| Dictyostelium discoideum hypothetical protein (DDB0189444), partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 206 ctgatgaagaagaagaagaa 225
>ref|XM_636763.1| Dictyostelium discoideum hypothetical protein (DDB0205024), partial mRNA Length = 9312 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 8636 atgaagaagaagaagaaaaa 8655
>ref|XM_634014.1| Dictyostelium discoideum hypothetical protein (DDB0185462), partial mRNA Length = 4812 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 1023 tgatgaagaagaagaagaaa 1042
>gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome 6, complete sequence Length = 243690 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 240510 gaagaagaagaagaaaaata 240491
>ref|XM_469819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 tccttcagcctcttctctttcttc 436 ||||||||||| |||||||||||| Sbjct: 1254 tccttcagccttttctctttcttc 1231
>ref|XM_469139.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 848 atgaagaagaagaagaaaaa 867
>gb|AC115803.17| Mus musculus chromosome 8, clone RP23-410F24, complete sequence Length = 169100 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 69440 tgatgaagaagaagaagaaa 69459
>gb|BT017037.1| Zea mays clone EL01N0202E08.c mRNA sequence Length = 806 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 cttctctttcttctgtaacg 443 |||||||||||||||||||| Sbjct: 90 cttctctttcttctgtaacg 71
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaata 85 ||||||||||||||||||| |||| Sbjct: 88520 tgatgaagaagaagaagaagaata 88497
>gb|AY441151.1| Armigeres subalbatus ASAP ID: 40687 conserved unknown mRNA sequence Length = 536 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 tcttgaacttcttcacaatgcagt 395 ||||||||||||||| |||||||| Sbjct: 491 tcttgaacttcttcataatgcagt 468
>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence Length = 171392 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 125549 atgaagaagaagaagaaaaa 125568
>gb|AY518338.1| Oncorhynchus mykiss microsatellite Omy1015UW sequence Length = 378 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 149 gaagaagaagaagaaaaata 130
>gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 genomic sequence, complete sequence Length = 110954 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 aactgatgaagaagaagaagaaaa 82 |||||| ||||||||||||||||| Sbjct: 53853 aactgaagaagaagaagaagaaaa 53876
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 62709 tgatgaagaagaagaagaaa 62728
>gb|AC131998.9| Mus musculus chromosome 1, clone RP24-164G9, complete sequence Length = 152462 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 8818 gaagaagaagaagaaaaata 8799
>gb|AC116839.8| Mus musculus chromosome 8, clone RP24-390L13, complete sequence Length = 142874 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tgaagaagaagaagaaaaatacct 88 ||||||||||||| |||||||||| Sbjct: 77859 tgaagaagaagaaaaaaaatacct 77882
>gb|U80838.1| Caenorhabditis elegans cosmid F47F6, complete sequence Length = 40615 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 11326 gaagaagaagaagaaaaata 11345
>gb|AC137679.11| Mus musculus chromosome 12, clone RP23-302N13, complete sequence Length = 186273 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 177049 gatgaagaagaagaagaaaa 177068
>gb|AC158548.10| Mus musculus chromosome 5, clone RP23-258F17, complete sequence Length = 227065 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 144268 atgaagaagaagaagaaaaa 144249
>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence Length = 131587 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 104349 gaagaagaagaagaaaaata 104368
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 caaaaaatcagacatgattt 164 |||||||||||||||||||| Sbjct: 105664 caaaaaatcagacatgattt 105645
>gb|AY693015.1| Saccharomyces cerevisiae clone FLH158249.01X YGR103W gene, complete cds Length = 1818 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 1636 gatgaagaagaagaagaaaa 1655
>gb|BC075168.1| Xenopus laevis MGC82072 protein, mRNA (cDNA clone MGC:82072 IMAGE:7011536), complete cds Length = 1348 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 1094 gaagaagaagaagaaaaata 1113
>ref|XM_588775.2| PREDICTED: Bos taurus hypothetical LOC511442 (LOC511442), mRNA Length = 2093 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 693 gatgaagaagaagaagaaaa 712
>gb|DQ386648.1| Astatotilapia burtoni clone BAC 26M7 platelet-derived growth factor receptor beta a (pdgfrba) and colony-stimulating factor 1 receptor a (csf1ra) genes, complete cds Length = 97628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 19119 atgaagaagaagaagaaaaa 19138
>gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, complete sequence Length = 236163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 15646 gaagaagaagaagaaaaata 15665
>gb|BC033847.1| Homo sapiens Nipped-B homolog (Drosophila), mRNA (cDNA clone IMAGE:4498111), complete cds Length = 1076 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 670 ctgatgaagaagaagaagaa 689
>gb|AC134898.4| Mus musculus BAC clone RP23-478H2 from chromosome 14, complete sequence Length = 213348 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 119598 gatgaagaagaagaagaaaa 119579
>gb|AC140247.3| Mus musculus BAC clone RP23-469I15 from chromosome 9, complete sequence Length = 189336 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 126122 atgaagaagaagaagaaaaa 126103
>gb|AC183964.3| Pan troglodytes BAC clone CH251-654L7 from chromosome 12, complete sequence Length = 213075 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aagaagaagaagaaaaatac 86 |||||||||||||||||||| Sbjct: 179590 aagaagaagaagaaaaatac 179609
>gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, complete sequence Length = 134271 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gaaactgatgaagaagaagaagaa 80 |||||||| ||||||||||||||| Sbjct: 88833 gaaactgaagaagaagaagaagaa 88810
>gb|AY808861.1| Schistosoma japonicum SJCHGC04293 protein mRNA, partial cds Length = 787 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 34 atgaagaagaagaagaaaaa 15
>ref|XM_717815.1| Candida albicans SC5314 hypothetical protein (CaO19_12167), mRNA Length = 3555 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 928 gatgaagaagaagaagaaaa 947
>ref|XM_717669.1| Candida albicans SC5314 hypothetical protein (CaO19_4697), mRNA Length = 15114 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 12487 gatgaagaagaagaagaaaa 12506
>gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome 7, complete sequence Length = 194641 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggtacccgacctgtgtaagctgtg 37 ||||||||||||||||||| |||| Sbjct: 17090 ggtacccgacctgtgtaagatgtg 17067
>gb|AC147244.2| Mus musculus BAC clone RP23-462D5 from chromosome 7, complete sequence Length = 169667 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 130101 gaagaagaagaagaaaaata 130082
>ref|NM_029815.1| Mus musculus breast carcinoma amplified sequence 1 (Bcas1), mRNA Length = 2916 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 2079 gaagaagaagaagaaaaata 2060
>ref|XM_713478.1| Candida albicans SC5314 putative DNA polymerase delta subunit (CaO19_10002), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 977 atgaagaagaagaagaaaaa 996
>ref|XM_713477.1| Candida albicans SC5314 hypothetical protein (CaO19_10001), mRNA Length = 486 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 304 atgaagaagaagaagaaaaa 285
>ref|XM_713394.1| Candida albicans SC5314 putative DNA polymerase delta subunit (CaO19_2465), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 977 atgaagaagaagaagaaaaa 996
>ref|XM_713393.1| Candida albicans SC5314 hypothetical protein (CaO19_2464), mRNA Length = 486 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 304 atgaagaagaagaagaaaaa 285
>ref|XM_711824.1| Candida albicans SC5314 putative protein kinase (CaO19_12629), mRNA Length = 3963 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaata 85 ||||||||||||||||||| |||| Sbjct: 81 tgatgaagaagaagaagaagaata 58
>ref|XM_706520.1| Candida albicans SC5314 hypothetical protein (CaO19.10878), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 423 tgatgaagaagaagaagaaa 442
>ref|XM_706498.1| Candida albicans SC5314 ubiquitin-specific protease (CaO19.3370), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 423 tgatgaagaagaagaagaaa 442
>gb|AY810664.1| Schistosoma japonicum SJCHGC03674 protein mRNA, partial cds Length = 719 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 92 atgaagaagaagaagaaaaa 111
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 82354 gaagaagaagaagaaaaata 82373
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 149420 gaagaagaagaagaaaaata 149401
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 25703013 atgaagaagaagaagaaaaa 25702994 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 5266723 gatgaagaagaagaagaaaa 5266704 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 agaaactgatgaagaagaagaaga 79 |||||||||| ||||||||||||| Sbjct: 4147326 agaaactgatcaagaagaagaaga 4147303
>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence Length = 241184 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gaaactgatgaagaagaagaagaa 80 |||||||| ||||||||||||||| Sbjct: 55027 gaaactgaagaagaagaagaagaa 55004
>gb|AC125064.6| Mus musculus BAC clone RP23-430F7 from chromosome 14, complete sequence Length = 188477 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 91882 gaagaagaagaagaaaaata 91863
>gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209011 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 179527 atgaagaagaagaagaaaaa 179508
>gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, complete sequence Length = 239102 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 198948 atgaagaagaagaagaaaaa 198967
>gb|AC145793.2| Xenopus tropicalis clone CH216-157F1, complete sequence Length = 143148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 16718 gaagaagaagaagaaaaata 16737
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence Length = 170753 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 105977 gaagaagaagaagaaaaata 105958
>gb|AC009974.10| Homo sapiens BAC clone RP11-459I19 from 2, complete sequence Length = 206855 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 102721 gaagaagaagaagaaaaata 102702
>ref|XM_991560.1| PREDICTED: Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type II, beta, transcript variant 1 (Pip5k2b), mRNA Length = 2622 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 749 atgaagaagaagaagaaaaa 730
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 141883 atgaagaagaagaagaaaaa 141902
>ref|XM_711891.1| Candida albicans SC5314 protein kinase (BCK1) partial mRNA Length = 3963 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaata 85 ||||||||||||||||||| |||| Sbjct: 81 tgatgaagaagaagaagaagaata 58
>ref|XM_755573.1| Ustilago maydis 521 hypothetical protein (UM04519.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 2319 tgatgaagaagaagaagaaa 2338
>emb|BX001006.7| Zebrafish DNA sequence from clone DKEY-148M7 in linkage group 3, complete sequence Length = 193997 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 65046 gaagaagaagaagaaaaata 65065
>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete sequence Length = 209619 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 98899 atgaagaagaagaagaaaaa 98918
>gb|AC124473.2| Mus musculus BAC clone RP24-86K23 from chromosome 3, complete sequence Length = 185436 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 39956 atgaagaagaagaagaaaaa 39975
>emb|CT008507.2| Mouse DNA sequence from clone CH25-94C24 on chromosome 11, complete sequence Length = 36837 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 6620 atgaagaagaagaagaaaaa 6601
>gb|BC063859.1| Homo sapiens cDNA clone IMAGE:6186421, partial cds Length = 3005 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 1774 ctgatgaagaagaagaagaa 1793
>gb|BC048647.1| Mus musculus breast carcinoma amplified sequence 1, mRNA (cDNA clone IMAGE:6772460), complete cds Length = 724 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 648 gaagaagaagaagaaaaata 629
>gb|BC024553.1| Mus musculus breast carcinoma amplified sequence 1, mRNA (cDNA clone IMAGE:4990823), with apparent retained intron Length = 1367 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 509 gaagaagaagaagaaaaata 490
>ref|XM_445545.1| Candida glabrata CBS138, CAGL0D02970g partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 367 gatgaagaagaagaagaaaa 386
>gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 178364 tgatgaagaagaagaagaaa 178383
>gb|AC139183.4| Mus musculus BAC clone RP24-114C21 from chromosome 18, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 14939 atgaagaagaagaagaaaaa 14920
>gb|AC122460.4| Mus musculus BAC clone RP24-283I1 from chromosome 19, complete sequence Length = 173119 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 103288 gaagaagaagaagaaaaata 103307
>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete sequence Length = 86190 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 61928 tgatgaagaagaagaagaaa 61947
>gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosome 9, complete sequence Length = 168789 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 4475 atgaagaagaagaagaaaaa 4456
>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence Length = 212994 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 169571 atgaagaagaagaagaaaaa 169552
>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence Length = 149451 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 106275 atgaagaagaagaagaaaaa 106294
>gb|AY040221.1| Lactobacillus delbrueckii subsp. bulgaricus ATP-binding protein OppD (oppD), ATP-binding protein OppF (oppF), transmembrane protein OppB (oppB), transmembrane protein OppC (oppC), oligopeptide binding protein OppA1 (oppA1), and oligopeptide binding protein OppA2 (oppA2) genes, complete cds Length = 7920 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tgatcttgtccagcttcgccttgc 260 |||||||||||||||| ||||||| Sbjct: 4986 tgatcttgtccagcttggccttgc 4963
>gb|AC123543.3| Lemur catta clone LB2-212N12, complete sequence Length = 203201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 22066 atgaagaagaagaagaaaaa 22085
>gb|AC127570.4| Mus musculus BAC clone RP24-225D13 from chromosome 18, complete sequence Length = 187220 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 27627 atgaagaagaagaagaaaaa 27646
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 108595 tgatgaagaagaagaagaaa 108614
>gb|AC127235.3| Mus musculus BAC clone RP24-570A23 from chromosome 10, complete sequence Length = 189180 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 5842 atgaagaagaagaagaaaaa 5823
>emb|Z81577.1|CER11 Caenorhabditis elegans Cosmid R11, complete sequence Length = 28740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 1493 tgatgaagaagaagaagaaa 1474
>emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 in linkage group 8, complete sequence Length = 151455 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 66117 gaagaagaagaagaaaaata 66098
>ref|XM_883814.1| Candida albicans SC5314 hypothetical protein (CaJ7.0340) partial mRNA Length = 3963 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tgatgaagaagaagaagaaaaata 85 ||||||||||||||||||| |||| Sbjct: 81 tgatgaagaagaagaagaagaata 58
>gb|AC127431.1| Mus musculus BAC clone RP24-481H21 from 7, complete sequence Length = 166978 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggtacccgacctgtgtaagctgtg 37 ||||||||||||||||||| |||| Sbjct: 90880 ggtacccgacctgtgtaagatgtg 90857
>ref|XM_651934.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (5.t00035) partial mRNA Length = 1431 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gaaactgatgaagaagaagaagaa 80 |||||||||| ||||||||||||| Sbjct: 763 gaaactgatgcagaagaagaagaa 786
>gb|AY219233.1| Mus musculus novel amplified in breast cancer-1 mRNA, complete cds Length = 2916 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 2079 gaagaagaagaagaaaaata 2060
>ref|XM_724152.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01473) partial mRNA Length = 1281 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 277 gatgaagaagaagaagaaaa 296 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gatgaagaagaagaagaaaa 82 |||||||||||||||||||| Sbjct: 244 gatgaagaagaagaagaaaa 263
>emb|CR695462.1|CNS0FZKI Tetraodon nigroviridis full-length cDNA Length = 989 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 298 gaagaagaagaagaaaaata 317
>ref|XM_725281.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02491) partial mRNA Length = 258 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 45 gaagaagaagaagaaaaata 64
>ref|XM_668171.1| Plasmodium berghei strain ANKA hypothetical protein (PB000518.03.0) partial mRNA Length = 1167 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgatgaagaagaagaagaaa 81 |||||||||||||||||||| Sbjct: 933 tgatgaagaagaagaagaaa 952
>gb|BT010598.1| Arabidopsis thaliana At4g27340 gene, complete cds Length = 1860 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 actgatgaagaagaagaaga 79 |||||||||||||||||||| Sbjct: 469 actgatgaagaagaagaaga 488
>gb|AC110920.10| Mus musculus chromosome 12, clone RP23-328I23, complete sequence Length = 223308 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 158194 gaagaagaagaagaaaaata 158213
>gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, complete sequence Length = 267946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 111974 gaagaagaagaagaaaaata 111955
>gb|AC154411.2| Mus musculus BAC clone RP24-221F4 from chromosome 17, complete sequence Length = 174229 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 86241 atgaagaagaagaagaaaaa 86260
>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence Length = 209280 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 168577 atgaagaagaagaagaaaaa 168596
>gb|AY644517.2| Bos taurus T cell receptor gamma (TCRG) gene, partial sequence Length = 243699 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 109048 gaagaagaagaagaaaaata 109067
>gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, complete sequence Length = 221232 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 167878 gaagaagaagaagaaaaata 167859
>gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, complete sequence Length = 191935 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 88342 gaagaagaagaagaaaaata 88361
>gb|AC144722.11| Medicago truncatula clone mth2-26h11, complete sequence Length = 122089 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cttcttgaacttcttcacaa 389 |||||||||||||||||||| Sbjct: 102530 cttcttgaacttcttcacaa 102511
>gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete sequence Length = 111276 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ctgatgaagaagaagaagaa 80 |||||||||||||||||||| Sbjct: 85974 ctgatgaagaagaagaagaa 85955
>gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete sequence Length = 118803 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaagaagaagaagaaaaata 85 |||||||||||||||||||| Sbjct: 20666 gaagaagaagaagaaaaata 20647
>gb|AC126780.18| Medicago truncatula clone mth2-10n4, complete sequence Length = 139213 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgaagaagaagaagaaaaa 83 |||||||||||||||||||| Sbjct: 136125 atgaagaagaagaagaaaaa 136106 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,327,894 Number of Sequences: 3902068 Number of extensions: 7327894 Number of successful extensions: 794996 Number of sequences better than 10.0: 542 Number of HSP's better than 10.0 without gapping: 546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 785370 Number of HSP's gapped (non-prelim): 9570 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)