ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal27j14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5910 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 5888 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 5829 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||||||||| | ||||||||||| || || ||||||||||| || |||||||||||| Sbjct: 5828 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 5769 Query: 355 ggggtgaagagcagcagccccatgatgatctc 386 |||||||||||||| ||||||||||||||||| Sbjct: 5768 ggggtgaagagcaggagccccatgatgatctc 5737 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctgga 520 ||||| ||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 5657 agcagaccccagccagttggcatgaaggcaagaatgcaaacaaagatgtcctgga 5603
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein mRNA, partial cds Length = 2727 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 2705 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 2646 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||||||||| | ||||||||||| || || ||||||||||| || |||||||||||| Sbjct: 2645 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 2586 Query: 355 ggggtgaagagcagcagccccatgatgatctc 386 |||||||||||||| ||||||||||||||||| Sbjct: 2585 ggggtgaagagcaggagccccatgatgatctc 2554 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctgga 520 ||||| ||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 2474 agcagaccccagccagttggcatgaaggcaagaatgcaaacaaagatgtcctgga 2420
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 35822611 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 35822552 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||||||||| | ||||||||||| || || ||||||||||| || |||||||||||| Sbjct: 35822551 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 35822492 Query: 355 ggggtgaagagcagcagccccatgatgatctc 386 |||||||||||||| ||||||||||||||||| Sbjct: 35822491 ggggtgaagagcaggagccccatgatgatctc 35822460 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctgga 520 ||||| ||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 35822302 agcagaccccagccagttggcatgaaggcaagaatgcaaacaaagatgtcctgga 35822248 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 catacactactactactaca 31 |||||||||||||||||||| Sbjct: 4771226 catacactactactactaca 4771245
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 13157 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 13098 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||||||||| | ||||||||||| || || ||||||||||| || |||||||||||| Sbjct: 13097 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 13038 Query: 355 ggggtgaagagcagcagccccatgatgatctc 386 |||||||||||||| ||||||||||||||||| Sbjct: 13037 ggggtgaagagcaggagccccatgatgatctc 13006 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctgga 520 ||||| ||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 12848 agcagaccccagccagttggcatgaaggcaagaatgcaaacaaagatgtcctgga 12794
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 93326 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 93267 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||||||||| | ||||||||||| || || ||||||||||| || |||||||||||| Sbjct: 93266 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 93207 Query: 355 ggggtgaagagcagcagccccatgatgatctc 386 |||||||||||||| ||||||||||||||||| Sbjct: 93206 ggggtgaagagcaggagccccatgatgatctc 93175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctgga 520 ||||| ||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 93017 agcagaccccagccagttggcatgaaggcaagaatgcaaacaaagatgtcctgga 92963
>dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F07, full insert sequence Length = 1292 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || || ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 915 cggtctttcttgtggccgccaaggattcgcgagatctgcagacctctgctgaaggcctgg 856 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||||||||| | ||||||||||| || || ||||||||||| || |||||||||||| Sbjct: 855 ttgaagagcattctggtctggaactcggatacaaacgggaaccaagcgaggaacgcgatc 796 Query: 355 ggggtgaagagcagcagccccatgatgatctc 386 |||||||||||||| ||||||||||||||||| Sbjct: 795 ggggtgaagagcaggagccccatgatgatctc 764 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctgga 520 ||||| ||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 684 agcagaccccagccagttggcatgaaggcaagaatgcaaacaaagatgtcctgga 630
>gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan synthase 3 (GSL3) mRNA, partial cds Length = 481 Score = 133 bits (67), Expect = 8e-28 Identities = 160/191 (83%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 |||||||||||||| || || ||||| | ||||||||||| || | |||||| |||||| Sbjct: 472 cggtccttcttgtggccgccgaggatacgggagatctgcaggcctctgctgaacgcctgg 413 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||| ||||||| ||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 412 ttgaaaagcatcctggtctggaactcggacacaaaggggaaccacgcaaggaacgcgatg 353 Query: 355 ggggtgaagagcagcagccccatgatgatctcgtacccacgagctagagcccggatcgac 414 || ||||| ||||| |||||||| | ||||||||| || || || |||||| | |||| Sbjct: 352 ggcgtgaacagcaggagccccatcaggatctcgtagccccgggcgagagccttcaccgac 293 Query: 415 ccccacagccc 425 ||||||||||| Sbjct: 292 ccccacagccc 282 Score = 101 bits (51), Expect = 3e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctggatcgtc 525 |||||||||||||| || ||||||||||| |||||||||||||| ||||| ||| ||| Sbjct: 241 agcaggccccatccagtcggcatgaaggcgaggatgcagacgaagatgtcaaggactgtc 182 Query: 526 atgtgggggatcacgataaggatcacgatggtggagatgaacacgatgaagatcagcccc 585 ||||||| ||| | | | ||| | |||| |||||||||| ||||| ||||||||| Sbjct: 181 atgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatcagcccc 122 Query: 586 ttgagcagccggaacacgagctggaactncgcgctgaa 623 |||| ||| ||||| ||||||||||||| ||||||||| Sbjct: 121 ttgatcagacggaagacgagctggaactccgcgctgaa 84
>gb|AY107727.1| Zea mays PCO075555 mRNA sequence Length = 2352 Score = 123 bits (62), Expect = 7e-25 Identities = 143/170 (84%) Strand = Plus / Minus Query: 217 tccttgctccgcgccgcccggtccttcttgtgcccacccaggatcctcgagatctgcaga 276 |||||| |||| || |||||||| |||||||| || || ||||| | || ||||||||| Sbjct: 2109 tccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgcaga 2050 Query: 277 ccacggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaac 336 || | ||||||||||||||||| ||||||| ||||||||||| || || ||||||||| Sbjct: 2049 cctctactgaaggcctggttgaacagcatccttgtctggaactccgaaacaaacgggaac 1990 Query: 337 cacgccaggaacgcgatcggggtgaagagcagcagccccatgatgatctc 386 || || ||||| |||||||||||||| | ||||| |||||||||||||| Sbjct: 1989 caagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctc 1940 Score = 75.8 bits (38), Expect = 2e-10 Identities = 116/142 (81%) Strand = Plus / Minus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctggatcgtcatgtgg 531 |||||||| ||||||||||| ||||||||||| || || |||||||| | |||||||| Sbjct: 1854 ccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctgaactgtcatgtgt 1795 Query: 532 gggatcacgataaggatcacgatggtggagatgaacacgatgaagatcagccccttgagc 591 ||||| | || | ||| | ||| | ||||| ||| ||||| ||||||||||||| | Sbjct: 1794 gggattgctatcaagattatgataatagagataaacgttatgaatatcagccccttgatc 1735 Query: 592 agccggaacacgagctggaact 613 ||||||||||| |||||||||| Sbjct: 1734 agccggaacacaagctggaact 1713
>gb|AY108207.1| Zea mays PCO082315 mRNA sequence Length = 1199 Score = 117 bits (59), Expect = 5e-23 Identities = 158/191 (82%) Strand = Plus / Minus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| |||||||| || |||||||| | |||||||||||||| | |||||| |||||| Sbjct: 874 cggtctttcttgtgtcctcccaggatacgggagatctgcagacctctgctgaacgcctgg 815 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgcgatc 354 ||||| ||||||| |||||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 814 ttgaacagcatcctggtctggaattccgacacgaacgggaaccaggcgaggaaggcgatg 755 Query: 355 ggggtgaagagcagcagccccatgatgatctcgtacccacgagctagagcccggatcgac 414 || ||||| || || || ||||| | ||||||||| || || || |||||| |||||| Sbjct: 754 ggcgtgaacaggagaagtcccatcaggatctcgtagccccgggcaagagccttgatcgag 695 Query: 415 ccccacagccc 425 ||||| ||||| Sbjct: 694 ccccagagccc 684 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcc 516 |||||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 637 ccccatccagtgggcatgaaagcaaggatgcaaacaaatatgtcc 593
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| ||||||||||| || ||||| | |||||||||||||| | ||||||||||||| Sbjct: 30517862 cggtctttcttgtgcccgccaaggatacgggagatctgcagacctctgctgaaggcctgg 30517921 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||||||||||| ||||||||||| |||||||| || ||||| || |||||||| Sbjct: 30517922 ttgaagagcatcctggtctggaactcggacacgaaaggaaaccaagcaaggaacgc 30517977 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||| || || ||||||||||||||||||||||||| || ||||||||||| || Sbjct: 4077967 gagatctggaggcctcggctgaaggcctggttgaagagcagcctcgtctggaactcggag 4078026 Query: 325 acgaacgggaaccacgccag 344 ||||| |||||||||||||| Sbjct: 4078027 acgaaggggaaccacgccag 4078046 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaa 509 |||| ||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 30518191 agcaagccccatccagttggcatgaaagcaaggatgcaaacgaa 30518234
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| ||||||||||| || ||||| | |||||||||||||| | ||||||||||||| Sbjct: 16425 cggtctttcttgtgcccgccaaggatacgggagatctgcagacctctgctgaaggcctgg 16484 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||||||||||| ||||||||||| |||||||| || ||||| || |||||||| Sbjct: 16485 ttgaagagcatcctggtctggaactcggacacgaaaggaaaccaagcaaggaacgc 16540 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaa 509 |||| ||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 16754 agcaagccccatccagttggcatgaaagcaaggatgcaaacgaa 16797
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 235 cggtccttcttgtgcccacccaggatcctcgagatctgcagaccacggctgaaggcctgg 294 ||||| ||||||||||| || ||||| | |||||||||||||| | ||||||||||||| Sbjct: 155223 cggtctttcttgtgcccgccaaggatacgggagatctgcagacctctgctgaaggcctgg 155282 Query: 295 ttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||||||||||| ||||||||||| |||||||| || ||||| || |||||||| Sbjct: 155283 ttgaagagcatcctggtctggaactcggacacgaaaggaaaccaagcaaggaacgc 155338 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 466 agcaggccccatcccgttggcatgaaggcaaggatgcagacgaa 509 |||| ||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 155552 agcaagccccatccagttggcatgaaagcaaggatgcaaacgaa 155595
>ref|NM_193211.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5634 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 5597 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 5538 Query: 316 aactcagacacgaacgggaaccacgccagga 346 ||||| || ||||| |||||||||| ||||| Sbjct: 5537 aactcggagacgaaggggaaccacgacagga 5507
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 19299761 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 19299820 Query: 316 aactcagacacgaacgggaaccacgccagga 346 ||||| || ||||| |||||||||| ||||| Sbjct: 19299821 aactcggagacgaaggggaaccacgacagga 19299851 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| |||||||| || |||||||||||||||||||||||||||| || |||||| Sbjct: 19254716 aggatccttgagatctggaggccacggctgaaggcctggttgaagagcagtcgtgtctgg 19254775 Query: 316 aactcagacacgaacgggaacca 338 ||||| |||||||| |||||||| Sbjct: 19254776 aactcggacacgaaggggaacca 19254798
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 119382 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 119441 Query: 316 aactcagacacgaacgggaaccacgccagga 346 ||||| || ||||| |||||||||| ||||| Sbjct: 119442 aactcggagacgaaggggaaccacgacagga 119472 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| |||||||| || |||||||||||||||||||||||||||| || |||||| Sbjct: 74337 aggatccttgagatctggaggccacggctgaaggcctggttgaagagcagtcgtgtctgg 74396 Query: 316 aactcagacacgaacgggaacca 338 ||||| |||||||| |||||||| Sbjct: 74397 aactcggacacgaaggggaacca 74419
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 27766 aggatcctggagatctgcagcccccggctgaaggcctggttgaagagcagccgagtctga 27825 Query: 316 aactcagacacgaacgggaaccacgccagga 346 ||||| || ||||| |||||||||| ||||| Sbjct: 27826 aactcggagacgaaggggaaccacgacagga 27856
>ref|NM_193203.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1809 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| |||||||| || |||||||||||||||||||||||||||| || |||||| Sbjct: 1617 aggatccttgagatctggaggccacggctgaaggcctggttgaagagcagtcgtgtctgg 1558 Query: 316 aactcagacacgaacgggaacca 338 ||||| |||||||| |||||||| Sbjct: 1557 aactcggacacgaaggggaacca 1535
>dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-F01, full insert sequence Length = 1923 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 256 aggatcctcgagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctgg 315 |||||||| ||||||||||| || ||||||||||||||| ||||||||| ||||||||| Sbjct: 1665 aggatcctggagatctgcagcccccggctgaaggcctggctgaagagcagccgagtctga 1606 Query: 316 aactcagacacgaacgggaaccacgccagga 346 ||||| || ||||| |||||||||| ||||| Sbjct: 1605 aactcggagacgaaggggaaccacgacagga 1575
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||| || || ||||||||||||||||||||||||| || ||||||||||| || Sbjct: 121620 gagatctggaggcctcggctgaaggcctggttgaagagcagcctcgtctggaactcggag 121679 Query: 325 acgaacgggaaccacgccag 344 ||||| |||||||||||||| Sbjct: 121680 acgaaggggaaccacgccag 121699
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||| || || ||||||||||||||||||||||||| || ||||||||||| || Sbjct: 11226 gagatctggaggcctcggctgaaggcctggttgaagagcagcctcgtctggaactcggag 11285 Query: 325 acgaacgggaaccacgccag 344 ||||| |||||||||||||| Sbjct: 11286 acgaaggggaaccacgccag 11305
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA, complete cds Length = 5772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 267 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagacac 326 |||||| ||||||||||| ||||| || |||||||| | || |||||||||||||| || Sbjct: 5736 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 5677 Query: 327 gaacgggaaccacgc 341 ||| ||||||||||| Sbjct: 5676 gaaagggaaccacgc 5662
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds Length = 5880 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 292 tggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||| |||||||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 5801 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccaggaacgc 5743
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds Length = 5950 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 267 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagacac 326 |||||| ||||||||||| ||||| || |||||||| | || |||||||||||||| || Sbjct: 5889 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 5830 Query: 327 gaacgggaaccacgc 341 ||| ||||||||||| Sbjct: 5829 gaaagggaaccacgc 5815
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete sequence Length = 102585 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 267 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagacac 326 |||||| ||||||||||| ||||| || |||||||| | || |||||||||||||| || Sbjct: 96525 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 96466 Query: 327 gaacgggaaccacgc 341 ||| ||||||||||| Sbjct: 96465 gaaagggaaccacgc 96451
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 267 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagacac 326 |||||| ||||||||||| ||||| || |||||||| | || |||||||||||||| || Sbjct: 14323 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 14264 Query: 327 gaacgggaaccacgc 341 ||| ||||||||||| Sbjct: 14263 gaaagggaaccacgc 14249
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 292 tggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||| |||||||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 89423 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccaggaacgc 89481
>tpg|BK001470.1| TPA: TPA_exp: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds Length = 5772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 267 gatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagacac 326 |||||| ||||||||||| ||||| || |||||||| | || |||||||||||||| || Sbjct: 5736 gatctggagaccacggctaaaggcttgattgaagagaagccttgtctggaactcagagac 5677 Query: 327 gaacgggaaccacgc 341 ||| ||||||||||| Sbjct: 5676 gaaagggaaccacgc 5662
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase, complete cds, clone: RAFL16-92-B13 Length = 2390 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 292 tggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||| |||||||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 2191 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccaggaacgc 2133
>gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan synthase 12 (GSL12) mRNA, partial cds Length = 527 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 ||||||| ||||||||||||||||||||||||||| || || || | ||||||| ||| Sbjct: 288 gagatctccagaccacggctgaaggcctggttgaacaggatgcgcgactggaacgtggac 229 Query: 325 acgaacgggaaccacg 340 || || |||||||||| Sbjct: 228 acaaaggggaaccacg 213
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1385 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 292 tggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccaggaacgc 350 ||||| |||||||| | ||||| ||||||||||||||||||||||| |||||| |||| Sbjct: 1237 tggttaaagagcattcttgtctgaaactcagacacgaacgggaaccaagccagggacgc 1179
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase, transferring glycosyl groups AT1G05570 (CALS1) mRNA, complete cds Length = 6022 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaata 511 |||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 5603 ccccatccagttggcatgaaggcaagcatgcagatgaata 5564 Score = 48.1 bits (24), Expect = 0.035 Identities = 93/116 (80%) Strand = Plus / Minus Query: 286 aaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccagg 345 ||||| ||||| |||||||| | ||||||||||||||||| || || ||||| |||| Sbjct: 5789 aaggcttggttaaagagcattcttgtctggaactcagacacaaaaggaaaccaggccaaa 5730 Query: 346 aacgcgatcggggtgaagagcagcagccccatgatgatctcgtacccacgagctag 401 ||||| | || ||||| || |||| ||||| | ||||||||| || |||||||| Sbjct: 5729 aacgcaactggtgtgaacagaagcaagcccatcacgatctcgtagcctcgagctag 5674
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1) mRNA, complete cds Length = 6007 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaata 511 |||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 5603 ccccatccagttggcatgaaggcaagcatgcagatgaata 5564 Score = 48.1 bits (24), Expect = 0.035 Identities = 93/116 (80%) Strand = Plus / Minus Query: 286 aaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccagg 345 ||||| ||||| |||||||| | ||||||||||||||||| || || ||||| |||| Sbjct: 5789 aaggcttggttaaagagcattcttgtctggaactcagacacaaaaggaaaccaggccaaa 5730 Query: 346 aacgcgatcggggtgaagagcagcagccccatgatgatctcgtacccacgagctag 401 ||||| | || ||||| || |||| ||||| | ||||||||| || |||||||| Sbjct: 5729 aacgcaactggtgtgaacagaagcaagcccatcacgatctcgtagcctcgagctag 5674
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I, complete sequence Length = 84203 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaata 511 |||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 80310 ccccatccagttggcatgaaggcaagcatgcagatgaata 80349 Score = 48.1 bits (24), Expect = 0.035 Identities = 93/116 (80%) Strand = Plus / Plus Query: 286 aaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccagg 345 ||||| ||||| |||||||| | ||||||||||||||||| || || ||||| |||| Sbjct: 80026 aaggcttggttaaagagcattcttgtctggaactcagacacaaaaggaaaccaggccaaa 80085 Query: 346 aacgcgatcggggtgaagagcagcagccccatgatgatctcgtacccacgagctag 401 ||||| | || ||||| || |||| ||||| | ||||||||| || |||||||| Sbjct: 80086 aacgcaactggtgtgaacagaagcaagcccatcacgatctcgtagcctcgagctag 80141
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete sequence Length = 103223 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaata 511 |||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 29761 ccccatccagttggcatgaaggcaagcatgcagatgaata 29800 Score = 48.1 bits (24), Expect = 0.035 Identities = 93/116 (80%) Strand = Plus / Plus Query: 286 aaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccacgccagg 345 ||||| ||||| |||||||| | ||||||||||||||||| || || ||||| |||| Sbjct: 29477 aaggcttggttaaagagcattcttgtctggaactcagacacaaaaggaaaccaggccaaa 29536 Query: 346 aacgcgatcggggtgaagagcagcagccccatgatgatctcgtacccacgagctag 401 ||||| | || ||||| || |||| ||||| | ||||||||| || |||||||| Sbjct: 29537 aacgcaactggtgtgaacagaagcaagcccatcacgatctcgtagcctcgagctag 29592
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds Length = 6194 Score = 50.1 bits (25), Expect = 0.009 Identities = 109/137 (79%) Strand = Plus / Minus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||| ||||| | ||||| || || || |||||||| || || |||||||| ||| Sbjct: 5992 gagatctgaagacctctactgaaagcttgattaaagagcatacgcgtttggaactctgac 5933 Query: 325 acgaacgggaaccacgccaggaacgcgatcggggtgaagagcagcagccccatgatgatc 384 || || || ||||| |||| |||||| | || ||||| |||| ||| ||||| | ||| Sbjct: 5932 acaaatggaaaccatgccaagaacgccactggcgtgaacagcaacagtcccattactatc 5873 Query: 385 tcgtacccacgagctag 401 ||||| ||||||||||| Sbjct: 5872 tcgtatccacgagctag 5856
>gb|AF304372.2| Nicotiana alata putative beta-1,3-glucan synthase (Gsl1) mRNA, complete cds Length = 6266 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 282 gctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaacca 338 |||||| ||||||||||| |||| || |||||||||||||| || || |||||||| Sbjct: 5964 gctgaaagcctggttgaaaagcagccttgtctggaactcagagacaaatgggaacca 5908
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project) Length = 90020 Score = 50.1 bits (25), Expect = 0.009 Identities = 109/137 (79%) Strand = Plus / Plus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||| ||||| | ||||| || || || |||||||| || || |||||||| ||| Sbjct: 62314 gagatctgaagacctctactgaaagcttgattaaagagcatacgcgtttggaactctgac 62373 Query: 325 acgaacgggaaccacgccaggaacgcgatcggggtgaagagcagcagccccatgatgatc 384 || || || ||||| |||| |||||| | || ||||| |||| ||| ||||| | ||| Sbjct: 62374 acaaatggaaaccatgccaagaacgccactggcgtgaacagcaacagtcccattactatc 62433 Query: 385 tcgtacccacgagctag 401 ||||| ||||||||||| Sbjct: 62434 tcgtatccacgagctag 62450
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds Length = 5802 Score = 48.1 bits (24), Expect = 0.035 Identities = 63/76 (82%) Strand = Plus / Minus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||||||||| || |||||||| || || || || | | ||| |||||||||||| Sbjct: 5753 gagatctgcagaccgcgactgaaggcttgattaaacagtaatctagtttggaactcagac 5694 Query: 325 acgaacgggaaccacg 340 || || |||||||||| Sbjct: 5693 acaaatgggaaccacg 5678
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I, complete sequence Length = 93724 Score = 48.1 bits (24), Expect = 0.035 Identities = 63/76 (82%) Strand = Plus / Plus Query: 265 gagatctgcagaccacggctgaaggcctggttgaagagcatccgagtctggaactcagac 324 |||||||||||||| || |||||||| || || || || | | ||| |||||||||||| Sbjct: 65013 gagatctgcagaccgcgactgaaggcttgattaaacagtaatctagtttggaactcagac 65072 Query: 325 acgaacgggaaccacg 340 || || |||||||||| Sbjct: 65073 acaaatgggaaccacg 65088
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence Length = 109793 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 472 ccccatcccgttggcatgaaggcaaggatgcagacgaatatgtcctggatcgtcatgtg 530 ||||| || ||||||||||||||||| ||||| || | |||||||| | ||||||||| Sbjct: 60462 ccccaaccagttggcatgaaggcaagaatgcaaacaacaatgtcctgcaacgtcatgtg 60520
>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence Length = 189789 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 atacatacatacatactactga 124 |||||||||||||||||||||| Sbjct: 134516 atacatacatacatactactga 134537
>gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 map 10, complete sequence Length = 221545 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactactga 124 |||||||||||||||||||||| Sbjct: 160852 atacatacatacatactactga 160831
>dbj|AK046085.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230341A15 product:unclassifiable, full insert sequence Length = 2456 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 atacatacatacatactactga 124 |||||||||||||||||||||| Sbjct: 532 atacatacatacatactactga 553
>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence Length = 223470 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 atacatacatacatactactga 124 |||||||||||||||||||||| Sbjct: 71741 atacatacatacatactactga 71762
>emb|AL353194.13| Human DNA sequence from clone RP11-119B16 on chromosome 20 Contains the 3' end of the gene for a novel protein (KIAA1271), a novel gene, the 5' end of PANK2 gene for Pantothenate kinase 2 (Hallervorden-Spatz syndrome) and a CpG island, complete sequence Length = 56570 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactactg 123 |||||||||||||||||||||| Sbjct: 24949 aatacatacatacatactactg 24970
>emb|CT033787.9| Mouse DNA sequence from clone RP24-86C3 on chromosome 12, complete sequence Length = 194345 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 atacatacatacatactactga 124 |||||||||||||||||||||| Sbjct: 64228 atacatacatacatactactga 64249
>gb|DQ112034.1| Perna viridis clone PV104 microsatellite sequence Length = 286 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ctggaatacatacatacatac 118 ||||||||||||||||||||| Sbjct: 74 ctggaatacatacatacatac 54
>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence Length = 179087 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ctggaatacatacatacatac 118 ||||||||||||||||||||| Sbjct: 98070 ctggaatacatacatacatac 98050
>gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence Length = 200913 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatact 119 ||||||||||||||||||||| Sbjct: 76567 tggaatacatacatacatact 76587
>gb|AC122794.3| Mus musculus BAC clone RP24-202L5 from chromosome 8, complete sequence Length = 157120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 aatacatacatacatactact 122 ||||||||||||||||||||| Sbjct: 42439 aatacatacatacatactact 42419
>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence Length = 173444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatact 119 ||||||||||||||||||||| Sbjct: 112504 tggaatacatacatacatact 112524
>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24, complete sequence Length = 175626 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactact 122 ||||||||||||||||||||| Sbjct: 89905 aatacatacatacatactact 89925
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 455599 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 455540 Query: 340 gccag 344 ||||| Sbjct: 455539 gccag 455535 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 374486 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 374427 Query: 340 gccag 344 ||||| Sbjct: 374426 gccag 374422
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 454757 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 454698 Query: 340 gccag 344 ||||| Sbjct: 454697 gccag 454693 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 373659 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 373600 Query: 340 gccag 344 ||||| Sbjct: 373599 gccag 373595
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 454753 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 454694 Query: 340 gccag 344 ||||| Sbjct: 454693 gccag 454689 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 373655 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 373596 Query: 340 gccag 344 ||||| Sbjct: 373595 gccag 373591
>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete sequence Length = 209779 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 caatctatccatctacctatc 215 ||||||||||||||||||||| Sbjct: 74263 caatctatccatctacctatc 74283
>gb|AC118343.1| Homo sapiens chromosome 19 clone LLNLR-234A10, complete sequence Length = 36965 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cagcctggaatacatacatacatac 118 ||||||||| ||||||||||||||| Sbjct: 17603 cagcctggactacatacatacatac 17627
>gb|AC104657.2| Homo sapiens BAC clone RP11-567F17 from 4, complete sequence Length = 126525 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ggaatacatacatacatacta 120 ||||||||||||||||||||| Sbjct: 79494 ggaatacatacatacatacta 79474
>gb|AC018478.4| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACH57F14, complete sequence Length = 103809 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acccccacagccccaccctca 433 ||||||||||||||||||||| Sbjct: 53183 acccccacagccccaccctca 53203
>gb|AC092313.2| Homo sapiens chromosome 19 clone LLNLR-293G8, complete sequence Length = 38582 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cagcctggaatacatacatacatac 118 ||||||||| ||||||||||||||| Sbjct: 32693 cagcctggactacatacatacatac 32669
>gb|AC093234.2| Homo sapiens chromosome 19 clone LLNLR-266A8, complete sequence Length = 36965 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cagcctggaatacatacatacatac 118 ||||||||| ||||||||||||||| Sbjct: 17603 cagcctggactacatacatacatac 17627
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 gagcagcagccccatgatgatctcg 387 |||||||||||| |||||||||||| Sbjct: 3613944 gagcagcagcccgatgatgatctcg 3613968
>emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-306B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188736 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ctggaatacatacatacatac 118 ||||||||||||||||||||| Sbjct: 15241 ctggaatacatacatacatac 15261
>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete sequence Length = 328561 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acccccacagccccaccctca 433 ||||||||||||||||||||| Sbjct: 39302 acccccacagccccaccctca 39322
>gb|AC008734.7| Homo sapiens chromosome 19 clone CTD-2529P6, complete sequence Length = 183137 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cagcctggaatacatacatacatac 118 ||||||||| ||||||||||||||| Sbjct: 56493 cagcctggactacatacatacatac 56469
>gb|U87286.1|DMU87286 Drosophila melanogaster clone 16J20, complete sequence Length = 33013 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acccccacagccccaccctca 433 ||||||||||||||||||||| Sbjct: 21238 acccccacagccccaccctca 21258
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 454610 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 454551 Query: 340 gccag 344 ||||| Sbjct: 454550 gccag 454546 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 280 cggctgaaggcctggttgaagagcatccgagtctggaactcagacacgaacgggaaccac 339 |||||||||||||| ||||| |||| | ||||||||||| || || || |||||||| Sbjct: 373523 cggctgaaggcctgattgaatagcaatctcgtctggaactccgagacaaatgggaaccat 373464 Query: 340 gccag 344 ||||| Sbjct: 373463 gccag 373459
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 139196 atacatacatacatactact 139215
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 agcagccggaacacgagctg 608 |||||||||||||||||||| Sbjct: 2239206 agcagccggaacacgagctg 2239187
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete sequence Length = 103090 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 ccccatcccgttggcatgaaggcaaggatgca 503 ||||| || ||||||||||||||||| ||||| Sbjct: 9354 ccccaaccagttggcatgaaggcaagaatgca 9323
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 201849 tggaatacatacatacatac 201868
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 175381 aatacatacatacatactac 175400
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 agagcagcagccccatgatg 381 |||||||||||||||||||| Sbjct: 736309 agagcagcagccccatgatg 736290
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 cggggtgaagagcagcagccccat 377 |||||||||| ||||||||||||| Sbjct: 6180754 cggggtgaagcgcagcagccccat 6180731
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 ccggatcgacccccacagccccac 428 |||||||||||||||| ||||||| Sbjct: 41557 ccggatcgacccccacggccccac 41534
>gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 gcatacactactactactac 30 |||||||||||||||||||| Sbjct: 98846 gcatacactactactactac 98827
>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence Length = 217836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cttcttgtgcccacccagga 259 |||||||||||||||||||| Sbjct: 121261 cttcttgtgcccacccagga 121242
>gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, complete sequence Length = 183596 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cttcttgtgcccacccagga 259 |||||||||||||||||||| Sbjct: 58031 cttcttgtgcccacccagga 58012
>gb|AC140387.2| Mus musculus BAC clone RP24-185D21 from chromosome 9, complete sequence Length = 158741 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 caatctatccatctacctat 214 |||||||||||||||||||| Sbjct: 46130 caatctatccatctacctat 46149
>gb|AY915763.1| Schistosoma japonicum SJCHGC09682 protein mRNA, partial cds Length = 2231 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 gaatacatacatacatacta 120 |||||||||||||||||||| Sbjct: 1974 gaatacatacatacatacta 1955
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 108743 atacatacatacatactact 108724
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217046 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 85717 aatacatacatacatactac 85736
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tacattgccaatgcaatttg 93 |||||||||||||||||||| Sbjct: 122349 tacattgccaatgcaatttg 122368
>gb|AC133607.3| Mus musculus BAC clone RP23-153N7 from chromosome 18, complete sequence Length = 223708 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 atactactgacaagccacaa 134 |||||||||||||||||||| Sbjct: 164472 atactactgacaagccacaa 164453
>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence Length = 205900 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 23073 atacatacatacatactact 23054
>gb|AC132085.3| Mus musculus BAC clone RP24-550M24 from chromosome 13, complete sequence Length = 150362 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 72259 atacatacatacatactact 72240
>gb|AC122530.3| Mus musculus BAC clone RP24-531C7 from chromosome 7, complete sequence Length = 141027 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ctggaatacatacatacata 117 |||||||||||||||||||| Sbjct: 137888 ctggaatacatacatacata 137907
>gb|AC123801.4| Mus musculus BAC clone RP24-374A1 from chromosome 15, complete sequence Length = 150979 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 43696 atacatacatacatactact 43677
>gb|AC123823.3| Mus musculus BAC clone RP24-63C11 from chromosome 7, complete sequence Length = 185494 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ctggaatacatacatacata 117 |||||||||||||||||||| Sbjct: 157772 ctggaatacatacatacata 157753
>gb|AC136903.6| Mus musculus chromosome 9, clone RP23-475J16, complete sequence Length = 180530 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 caatctatccatctacctat 214 |||||||||||||||||||| Sbjct: 171907 caatctatccatctacctat 171926
>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence Length = 207860 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 184170 atacatacatacatactact 184151
>gb|AC166347.2| Mus musculus BAC clone RP24-87G12 from chromosome 6, complete sequence Length = 193181 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 63893 tggaatacatacatacatac 63912
>gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence Length = 18334 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 555 ggtggagatgaacacgatgaagat 578 |||| ||||||||||||||||||| Sbjct: 11553 ggtgaagatgaacacgatgaagat 11530
>gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosome 1, complete sequence Length = 196584 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 79064 tggaatacatacatacatac 79045
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence Length = 105353 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 ccccatcccgttggcatgaaggcaaggatgca 503 ||||| || ||||||||||||||||| ||||| Sbjct: 80751 ccccaaccagttggcatgaaggcaagaatgca 80720
>emb|CR376761.19| Zebrafish DNA sequence from clone DKEY-6F24 in linkage group 2, complete sequence Length = 231384 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 acaagccacaaccgctacag 143 |||||||||||||||||||| Sbjct: 74417 acaagccacaaccgctacag 74398
>emb|AL354747.12| Human DNA sequence from clone RP11-362D13 on chromosome 10, complete sequence Length = 84615 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 8296 tggaatacatacatacatac 8277
>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence Length = 175873 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 113943 aatacatacatacatactac 113962
>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland Research Institute) complete sequence Length = 218874 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 105494 tggaatacatacatacatac 105513
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a nove gene, a ribosomal protein large p1 (Rplp1) pseudogene and the Cmah gene for CMP-N-Acetylneuraminic acid hydroxylase, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ggtccttcttgtgcccaccc 255 |||||||||||||||||||| Sbjct: 60148 ggtccttcttgtgcccaccc 60167
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tccttgctccgcgccgcccg 236 |||||||||||||||||||| Sbjct: 16687 tccttgctccgcgccgcccg 16668
>emb|BX649467.5| Zebrafish DNA sequence from clone CH211-117L16 in linkage group 4 Contains the gene for a novel protein similar to vertebrate mitochondrial ribosomal protein S18A (MRPS18A) and two novel genes, complete sequence Length = 74769 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tctatccatctacctatcgt 217 |||||||||||||||||||| Sbjct: 42978 tctatccatctacctatcgt 42959
>gb|DQ099285.1| Arachis hypogaea clone Ah-408 microsatellite sequence Length = 364 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 acactactactactacaaac 34 |||||||||||||||||||| Sbjct: 168 acactactactactacaaac 187
>gb|AC099789.2| Homo sapiens chromosome 1 clone RP11-377K22, complete sequence Length = 174162 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ctggaatacatacatacata 117 |||||||||||||||||||| Sbjct: 102513 ctggaatacatacatacata 102494
>gb|AF238375.3| Homo sapiens chromosome 21 clone BAC 49B5 map 21q21, complete sequence Length = 166124 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatctatccatctacctatc 215 |||||||||||||||||||| Sbjct: 88742 aatctatccatctacctatc 88761
>gb|DQ205696.1| Etheostoma caeruleum clone Eca22EPA microsatellite sequence Length = 435 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 atctatccatctacctatcg 216 |||||||||||||||||||| Sbjct: 155 atctatccatctacctatcg 136
>gb|AC069411.21| Homo sapiens 3 BAC RP11-609K13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156733 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 108150 aatacatacatacatactac 108169
>gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosome 12, complete sequence Length = 211156 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 177474 tggaatacatacatacatac 177493
>gb|AC154485.2| Mus musculus BAC clone RP24-117M9 from chromosome 12, complete sequence Length = 154864 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 138295 tggaatacatacatacatac 138276
>dbj|AK039876.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430024G23 product:unclassifiable, full insert sequence Length = 1771 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 1015 atacatacatacatactact 1034
>ref|NM_066512.3| Caenorhabditis elegans FLI-I (Drosophila flightless) homolog family member (fli-1) (fli-1) mRNA, complete cds Length = 4622 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 ggtggagatgaacacgatgaagat 578 |||| ||||||||||||||||||| Sbjct: 2912 ggtgaagatgaacacgatgaagat 2935
>dbj|AK047258.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930042M10 product:unclassifiable, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tccttgctccgcgccgcccg 236 |||||||||||||||||||| Sbjct: 186 tccttgctccgcgccgcccg 205
>emb|BX255929.7| Zebrafish DNA sequence from clone CH211-271P5 in linkage group 14, complete sequence Length = 147460 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 14196 atacatacatacatactact 14177
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 ccggatcgacccccacagccccac 428 |||||||||||||||| ||||||| Sbjct: 12126515 ccggatcgacccccacggccccac 12126538
>gb|AC157089.5| Mus musculus 10 BAC RP24-339G14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160723 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatctatccatctacctatc 215 |||||||||||||||||||| Sbjct: 31172 aatctatccatctacctatc 31191
>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aatctatccatctacctatc 215 |||||||||||||||||||| Sbjct: 152575 aatctatccatctacctatc 152556
>gb|AC126614.8| Homo sapiens 12 BAC RP11-756H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147545 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 22751 aatacatacatacatactac 22732
>gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P13, complete sequence Length = 150913 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cttcttgtgcccacccagga 259 |||||||||||||||||||| Sbjct: 96584 cttcttgtgcccacccagga 96603
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 53711 tggaatacatacatacatac 53692
>gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183168 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 130698 aatacatacatacatactac 130679
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 catacactactactactaca 31 |||||||||||||||||||| Sbjct: 51816 catacactactactactaca 51835
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 catacactactactactaca 31 |||||||||||||||||||| Sbjct: 13385 catacactactactactaca 13404
>emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on chromosome X, complete sequence Length = 115038 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 59515 atacatacatacatactact 59496
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatctatccatctacctatc 215 |||||||||||||||||||| Sbjct: 203115 aatctatccatctacctatc 203134
>emb|CR937049.3| CH230-323M7, complete sequence Length = 198674 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 156062 tggaatacatacatacatac 156081
>emb|CR925800.7| Zebrafish DNA sequence from clone ZFOS-476E6 in linkage group 4, complete sequence Length = 19867 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 acaagccacaaccgctacag 143 |||||||||||||||||||| Sbjct: 16558 acaagccacaaccgctacag 16577
>emb|AL356804.4|CNS05TDM Human chromosome 14 DNA sequence BAC R-718G2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185015 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 179630 tggaatacatacatacatac 179649
>gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, complete sequence Length = 222413 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 80566 aatacatacatacatactac 80585
>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatctatccatctacctatc 215 |||||||||||||||||||| Sbjct: 276309 aatctatccatctacctatc 276328
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 ccggatcgacccccacagccccac 428 |||||||||||||||| ||||||| Sbjct: 12205822 ccggatcgacccccacggccccac 12205845
>gb|AC132224.3| Mus musculus BAC clone RP24-554P12 from 1, complete sequence Length = 154996 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 2748 tggaatacatacatacatac 2767
>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence Length = 197316 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aatacatacatacatactac 121 |||||||||||||||||||| Sbjct: 194842 aatacatacatacatactac 194823
>gb|U01183.1|U01183 Caenorhabditis elegans homolog of D. melanogaster flightless-I gene product mRNA, complete cds Length = 4529 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 ggtggagatgaacacgatgaagat 578 |||| ||||||||||||||||||| Sbjct: 2912 ggtgaagatgaacacgatgaagat 2935
>gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, complete sequence Length = 184203 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 catgaaggcaaggatgcaga 505 |||||||||||||||||||| Sbjct: 71837 catgaaggcaaggatgcaga 71856
>gb|AC141891.3| Mus musculus BAC clone RP23-378A8 from 6, complete sequence Length = 152261 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 96781 tggaatacatacatacatac 96762
>emb|BX927192.15| Zebrafish DNA sequence from clone DKEY-56M20 in linkage group 5, complete sequence Length = 152997 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 acaagccacaaccgctacag 143 |||||||||||||||||||| Sbjct: 31182 acaagccacaaccgctacag 31163
>emb|AL935132.13| Mouse DNA sequence from clone RP23-8G23 on chromosome 2, complete sequence Length = 165444 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 95586 tggaatacatacatacatac 95605
>emb|AL672051.14| Mouse DNA sequence from clone RP23-332O3 on chromosome X, complete sequence Length = 163949 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 85398 tggaatacatacatacatac 85379
>emb|AL672271.9| Mouse DNA sequence from clone RP23-450H23 on chromosome X, complete sequence Length = 196613 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 88630 tggaatacatacatacatac 88611
>emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chromosome X, complete sequence Length = 81776 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 26253 atacatacatacatactact 26234
>emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chromosome 2, complete sequence Length = 213549 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 205978 tggaatacatacatacatac 205959
>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete sequence Length = 188425 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atacatacatacatactact 122 |||||||||||||||||||| Sbjct: 51937 atacatacatacatactact 51918
>emb|AL732619.13| Mouse DNA sequence from clone RP23-122I3 on chromosome 4, complete sequence Length = 225086 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tggaatacatacatacatac 118 |||||||||||||||||||| Sbjct: 87546 tggaatacatacatacatac 87527
>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1, LL56-APP region, complete sequence Length = 204699 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aatctatccatctacctatc 215 |||||||||||||||||||| Sbjct: 20730 aatctatccatctacctatc 20749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,905,269 Number of Sequences: 3902068 Number of extensions: 4905269 Number of successful extensions: 386692 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 384923 Number of HSP's gapped (non-prelim): 1767 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
