>QORH_ARATH (Q9SV68) Putative chloroplastic quinone-oxidoreductase homolog (EC|
           1.-.-.-)
          Length = 329

 Score =  147 bits (370), Expect = 2e-35
 Identities = 72/117 (61%), Positives = 91/117 (77%)
 Frame = -3

Query: 494 TPEGTSLQSPSGRKYDGVVHCTVGVSWSSFQPLLTDAGRVIDITPNFSAILTSALHWVTF 315
           TPEG +L+SPSG+KYD VVHC  G+ +S F+P L++ G+VIDITP  +A+ T A+  +T 
Sbjct: 208 TPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDITPGPNAMWTYAVKKITM 267

Query: 314 SKKRLVPLLLSPNKADLEFLVGLLKEGKLKTVIDSRFPLSDAGKAWQSSIDGHATGK 144
           SKK+LVPLLL P   +LEF+V L+KEGK+KTVIDS+ PLS A  AW  SIDGHATGK
Sbjct: 268 SKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSKHPLSKAEDAWAKSIDGHATGK 324

>QORH_SPIOL (Q8H0M1) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-)|
           (ceQORH)
          Length = 329

 Score =  137 bits (344), Expect = 2e-32
 Identities = 68/117 (58%), Positives = 87/117 (74%)
 Frame = -3

Query: 494 TPEGTSLQSPSGRKYDGVVHCTVGVSWSSFQPLLTDAGRVIDITPNFSAILTSALHWVTF 315
           TPEG SL SPSG+KYD VVH   G+ WS+F+P L++AG+VID+TP  +A++T A   +TF
Sbjct: 208 TPEGASLTSPSGKKYDYVVHGASGIPWSTFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTF 267

Query: 314 SKKRLVPLLLSPNKADLEFLVGLLKEGKLKTVIDSRFPLSDAGKAWQSSIDGHATGK 144
           SKK+LVPLLL P   + E++V L+KE KLKTVIDS+ PLS    AW   + GHATGK
Sbjct: 268 SKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTVIDSKHPLSKGEDAWSRIMGGHATGK 324

>CSI2_YEAST (Q08054) Chitin synthase 3 complex protein CSI2|
          Length = 341

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
 Frame = +1

Query: 157 WPSILLCHALPASLKGNLESITVFSLPSLSSPTKNSRSALLGDRSRGTRRFLENVTQCSA 336
           W  ILL H          + ++  +LPSLSS TK + S+  G  S  T   L   +  S 
Sbjct: 9   WKVILLLHLFALQ---EFQLVSAANLPSLSSSTKAADSSSKGSSSAKTTTSLGKSSVTSK 65

Query: 337 DV----RMAEKLGVMSITLPASV-----SNGWKDDQLTPTVQ*TTPSYFLP 462
           DV     +     +  IT  AS      S+ W ++ +  T   T  S ++P
Sbjct: 66  DVSSSHNVTSSTKMPKITTSASTSLYTNSSLWSNNSVISTSSITPSSVYIP 116

>ARGC_MYCLE (Q9CC15) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 347

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 145 LPVAWPSILLCHALPASLKGNLE-SITVFSLPSLSSPTKNSRSALLGDRSRGTRR 306
           +P  +P+ +L   LPA  +G +E ++TVF++  +S   + +++ LLG    G+ R
Sbjct: 150 VPGCYPTAILLALLPAMAEGLIEPAVTVFAVSGISGAGRAAKTKLLGSEVIGSAR 204

>RT4I1_MOUSE (Q924D0) Reticulon-4-interacting protein 1, mitochondrial precursor|
           (NOGO-interacting mitochondrial protein)
          Length = 396

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 266 LEFLVGLLKEGKLKTVIDSRFPLSDAGKAWQSSIDGHATGK 144
           L+ +  L+  GK++ VI+  FP S+  +A+     GHA GK
Sbjct: 350 LDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGHARGK 390

>COKA1_MOUSE (Q923P0) Collagen alpha-1(XX) chain (Fragment)|
          Length = 765

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 19/48 (39%), Positives = 20/48 (41%)
 Frame = -2

Query: 351 GHPHICAALGDVLQEAPRAPAPVAQQGGPGVLGRAAQGRQAEDGDRLE 208
           GHP      G   Q  P  P    QQG PG  GRA QG     G + E
Sbjct: 536 GHPGPKGEPGPPGQTGPEGPG--GQQGSPGTQGRAVQGPMGPPGAKGE 581

>TRPD_CORJK (Q4JWC7) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 367

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 342 EDGREIGGDVDNSPGVSQQWLERRPADTDGAVNHAVVLPAGGALQARPLW 491
           EDG  +GGD + +  V+ + ++    +  GA+  AV++ A GAL A   W
Sbjct: 284 EDGSLVGGDAEYNADVAVRLMK---GEISGAIKDAVLINAAGALTAVRGW 330

>RNBP6_MOUSE (Q8BIV3) Ran-binding protein 6 (RanBP6) (Fragment)|
          Length = 439

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/72 (27%), Positives = 32/72 (44%)
 Frame = -3

Query: 416 WSSFQPLLTDAGRVIDITPNFSAILTSALHWVTFSKKRLVPLLLSPNKADLEFLVGLLKE 237
           W S+ PL  D    I  T NF   L  + H          P+++ PN ++L  ++ ++ E
Sbjct: 338 WLSWLPLHEDKEEAIQ-TLNFLCDLIESNH----------PVVIGPNNSNLPKIISIIAE 386

Query: 236 GKLKTVIDSRFP 201
           GK+   I    P
Sbjct: 387 GKINETISHEDP 398

>RT4I1_HUMAN (Q8WWV3) Reticulon-4-interacting protein 1, mitochondrial precursor|
           (NOGO-interacting mitochondrial protein)
          Length = 396

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 266 LEFLVGLLKEGKLKTVIDSRFPLSDAGKAWQSSIDGHATGK 144
           L+ +  L+  GK++ VI+  FP S   +A+     GHA GK
Sbjct: 350 LDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGK 390

>HSP76_SAGOE (Q9N1U2) Heat shock 70 kDa protein 6 (Hsp-70-related intracellular|
           vitamin D-binding protein)
          Length = 643

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
 Frame = -2

Query: 489 RGDEPAEPLRQEVRR--RGSLHRRCQLVV----FPAIAD*RRESYRHHPQFLGHPHICAA 328
           +G    E LR ++ +  R  +  +CQ V+       +AD  +E Y H  + L    IC  
Sbjct: 552 KGSLQEESLRDKIPKEDRHKVQDKCQEVLAWLEHNQLAD--KEEYEHQKREL--EQICRP 607

Query: 327 LGDVLQEAPRAPAPVAQQGGPGVLGRAAQGRQAEDGDRLEVPL 199
           +   L             GGPGV G ++ G QA  GDR   P+
Sbjct: 608 IFSRLY------------GGPGVPGGSSCGAQARQGDRSTGPI 638

>JMJ3_SCHPO (O94691) Lid2 complex component jmj3 (Lid2C component jmj3)|
          Length = 752

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 343 RMAEKLGVMSITLPASVSNGWKDDQLTPT 429
           R+ +K G + +  P+SV N W +D + P+
Sbjct: 56  RLGKKYGAIKVVRPSSVLNPWNEDTMKPS 84

>ACCN4_HUMAN (Q96FT7) Amiloride-sensitive cation channel 4 (Amiloride-sensitive|
           cation channel 4, pituitary) (Acid-sensing ion channel
           4)
          Length = 647

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 315 LQEAPRAPAPVAQQGGPGVLGRAAQGRQ--AEDGDRLEVPLE 196
           L+E P  P P+ +   PG+L R  QGR+  A    R ++P+E
Sbjct: 92  LEEQPLPPLPLGR--APGLLAREGQGREALASPSSRGQMPIE 131

>RNBP6_HUMAN (O60518) Ran-binding protein 6 (RanBP6)|
          Length = 1105

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = -3

Query: 416  WSSFQPLLTDAGRVIDITPNFSAILTSALHWVTFSKKRLVPLLLSPNKADLEFLVGLLKE 237
            W S+ PL  D    I  T +F   L  + H          P+++ PN ++L  ++ ++ E
Sbjct: 1004 WLSWLPLHEDKEEAIQ-TLSFLCDLIESNH----------PVVIGPNNSNLPKIISIIAE 1052

Query: 236  GKLKTVIDSRFP 201
            GK+   I+   P
Sbjct: 1053 GKINETINYEDP 1064

>FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (Protein fat)|
          Length = 5147

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 285  QEQGHEALLGERHPVQRRCEDGREIG-GDVDNSPGVSQQWLERRPADTDGAVNHAVVLPA 461
            Q  G+E  + E H  QR  +  RE+G   V ++ G +   +E      D A N  +   +
Sbjct: 826  QAGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRS 885

Query: 462  GGALQARPL 488
            G    ARPL
Sbjct: 886  GRITTARPL 894

>RT4I1_BRARE (Q7T3C7) Reticulon-4-interacting protein 1 homolog, mitochondrial|
           precursor
          Length = 387

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -3

Query: 284 SPNKADLEFLVGLLKEGKLKTVIDSRFPLSDAGKAWQSSIDGHATGK 144
           +P+ + L+ +  ++  GK++ V++  F  +   +A+Q    GHA GK
Sbjct: 330 APSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPEAFQKVEQGHARGK 376

>K1576_HUMAN (Q9HCJ6) Probable oxidoreductase KIAA1576 (EC 1.-.-.-)|
          Length = 419

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = -3

Query: 302 LVPLLLSPNKADL-----EFLVGLLKEGKLKTVIDSRFPLSDAGKAWQSSIDGHATGK 144
           L+ LL    +A L     E L+GL  + K+K V+DS + L +  +A Q   D    GK
Sbjct: 318 LLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGK 375

>IL4RA_HUMAN (P24394) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)|
           (CD124 antigen) [Contains: Soluble interleukin-4
           receptor alpha chain (sIL4Ralpha/prot) (IL-4-binding
           protein) (IL4-BP)]
          Length = 825

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = -1

Query: 484 GRACRAPPAGSTTA---WFTAPSVSAGRLSSHC*LTPGELSTSPPISRPSS--HLRCT 326
           G +C  PP+GST+A   W   PS             P  L  SPP S   S  +L CT
Sbjct: 428 GESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPDNLTCT 485

>PIWL2_MOUSE (Q8CDG1) Piwi-like protein 2|
          Length = 971

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -2

Query: 348 HPHICAALGDVLQEAPRAPAPVAQQGGPGVLGRAAQGRQAEDGDRLEVPLERRRQGVAKQ 169
           HP  C  +     +APR   P   + GP   GR    R+ ED      P+++   G+   
Sbjct: 15  HPSQCVRMPGCWPQAPRPLEPAWGRAGPA--GRGLVFRKPEDSSPPLQPVQKDSVGLVSM 72

Query: 168 YR 163
           +R
Sbjct: 73  FR 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,394,065
Number of Sequences: 219361
Number of extensions: 1554487
Number of successful extensions: 5920
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5916
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)