| Clone Name | rbaal27h06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472439.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2277 Score = 56.0 bits (28), Expect = 3e-05 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 58 gatataagatatctgccatctgatgttagtgatggtgttgaaagagcctttcgacttcca 117 ||||| |||||||| ||||||||||||| ||||||| ||||||||| ||| | ||||| Sbjct: 1601 gatatgagatatcttccatctgatgttaaagatggtgaagaaagagcc-ttcaaattcca 1543 Query: 118 aggccctt 125 |||||||| Sbjct: 1542 aggccctt 1535
>dbj|AK067483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108P06, full insert sequence Length = 2652 Score = 56.0 bits (28), Expect = 3e-05 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 58 gatataagatatctgccatctgatgttagtgatggtgttgaaagagcctttcgacttcca 117 ||||| |||||||| ||||||||||||| ||||||| ||||||||| ||| | ||||| Sbjct: 1942 gatatgagatatcttccatctgatgttaaagatggtgaagaaagagcc-ttcaaattcca 1884 Query: 118 aggccctt 125 |||||||| Sbjct: 1883 aggccctt 1876
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 54.0 bits (27), Expect = 1e-04 Identities = 58/67 (86%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 58 gatataagatatctgccatctgatgttagtgatggtgttgaaagagcctttcgacttcca 117 ||||| |||||||| ||||||||||||| ||||||| ||||||||| ||| | ||||| Sbjct: 84479 gatatgagatatcttccatctgatgttaaagatggtgaagaaagagcc-ttcaaattcca 84537 Query: 118 aggccct 124 ||||||| Sbjct: 84538 aggccct 84544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 1e-04 Identities = 58/67 (86%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 58 gatataagatatctgccatctgatgttagtgatggtgttgaaagagcctttcgacttcca 117 ||||| |||||||| ||||||||||||| ||||||| ||||||||| ||| | ||||| Sbjct: 20650045 gatatgagatatcttccatctgatgttaaagatggtgaagaaagagcc-ttcaaattcca 20650103 Query: 118 aggccct 124 ||||||| Sbjct: 20650104 aggccct 20650110
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 44.1 bits (22), Expect = 0.097 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 tgttgaaagagcctttcgactt 114 |||||||||||||||||||||| Sbjct: 728744 tgttgaaagagcctttcgactt 728765
>gb|AY812367.1| Schistosoma japonicum SJCHGC03855 protein mRNA, partial cds Length = 843 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gatataagatatctgccatct 78 ||||||||||||||||||||| Sbjct: 396 gatataagatatctgccatct 376
>gb|U56103.1|CWU56103 Cuphea wrightii acyl-ACP thioesterase (FatB1) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 gattgtcaaaatttccatatg 32 ||||||||||||||||||||| Sbjct: 744 gattgtcaaaatttccatatg 764
>ref|XM_716617.1| Candida albicans SC5314 hypothetical protein (CaO19_1633), mRNA Length = 2232 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 gttagtgatggtgttgaaagagcc 105 ||||||| |||||||||||||||| Sbjct: 949 gttagtggtggtgttgaaagagcc 972
>ref|XM_716497.1| Candida albicans SC5314 hypothetical protein (CaO19_9201), mRNA Length = 2232 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 gttagtgatggtgttgaaagagcc 105 ||||||| |||||||||||||||| Sbjct: 949 gttagtggtggtgttgaaagagcc 972
>emb|AL035537.1|SPBC21 S.pombe chromosome II cosmid c21 Length = 15041 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gattgtcaaaatttccatat 31 |||||||||||||||||||| Sbjct: 6572 gattgtcaaaatttccatat 6591
>ref|NM_001022260.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC21.05c), partial mRNA Length = 1836 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gattgtcaaaatttccatat 31 |||||||||||||||||||| Sbjct: 1326 gattgtcaaaatttccatat 1307
>gb|M30827.1|YSPRAL2 S.pombe ral2 protein gene, complete cds Length = 2897 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gattgtcaaaatttccatat 31 |||||||||||||||||||| Sbjct: 2022 gattgtcaaaatttccatat 2003
>emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chromosome 9q32-33.3 Contains the 3' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and the 3'end of the ASTN2 gene for astrotactin 2, complete sequence Length = 159430 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tgatgttagtgatggtgtt 96 ||||||||||||||||||| Sbjct: 96826 tgatgttagtgatggtgtt 96844
>gb|AF307337.1|AF307337 Homo sapiens ALPP, ALPPL2, ALPI, XCE, CHRND, and CHRNG genes, complete sequence Length = 210301 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 cctttcgacttccaaggcc 122 ||||||||||||||||||| Sbjct: 173443 cctttcgacttccaaggcc 173425
>gb|AC092165.4| Homo sapiens BAC clone RP11-753F4 from 2, complete sequence Length = 100020 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 cctttcgacttccaaggcc 122 ||||||||||||||||||| Sbjct: 41583 cctttcgacttccaaggcc 41565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 930,608 Number of Sequences: 3902068 Number of extensions: 930608 Number of successful extensions: 60261 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60204 Number of HSP's gapped (non-prelim): 55 length of query: 128 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 107 effective length of database: 17,151,101,840 effective search space: 1835167896880 effective search space used: 1835167896880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)