ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8a11 |
|---|---|
| Clone Library Name | barley_pub |
>ACKA2_LISMF (Q71Z86) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 348 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 347 EQMRRELKMSEKGMIYVKGI 288 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA1_LISMO (Q8Y6V0) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 397 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 348 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 347 EQMRRELKMSEKGMIYVKGI 288 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA1_LISIN (Q92BD4) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 397 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 348 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 347 EQMRRELKMSEKGMIYVKGI 288 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA_BACCR (Q817C0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNLDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACLD (Q65G65) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G E+L Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPFIMEKTGQTADEVL 263
>ACKA_BACHK (Q6HCP0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACCZ (Q633F8) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACC1 (Q72Z96) Acetate kinase (EC 2.7.2.1) (A cetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACAN (Q81KV0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_STAES (Q8CS60) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G E+L Sbjct: 208 IGNGASIAAIDGGESIDTSMGFTPLAGVTMGTRSGNLDPALIPFIMEKTGKTADEVL 264
>ACKA_STAEQ (Q5HNJ4) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G E+L Sbjct: 208 IGNGASIAAIDGGESIDTSMGFTPLAGVTMGTRSGNLDPALIPFIMEKTGKTADEVL 264
>ACKA_BACSU (P37877) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G E+L Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVL 263
>RPOB_SOYBN (Q8HVY5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1070 Score = 29.6 bits (65), Expect = 5.8 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = -3 Query: 452 WTKASRKEEIKVKMVLSDDGNNVSEIL 372 W + SRK++I + ++ S G+N+SEIL Sbjct: 169 WARVSRKQKISILVLSSAMGSNLSEIL 195
>RPOB_PINTH (P41607) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1075 Score = 29.6 bits (65), Expect = 5.8 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -3 Query: 464 GVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 G W + SRK++I + ++LS G N+ EIL Sbjct: 166 GERIWARVSRKQKISIPVLLSAMGLNLEEIL 196
>AQP7_RAT (P56403) Aquaporin-7 (AQP-7)| Length = 269 Score = 29.6 bits (65), Expect = 5.8 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -3 Query: 506 GNNWFWLMTLSPLAGVY 456 GNNW+W+ ++PL G Y Sbjct: 234 GNNWWWVPVVAPLLGAY 250
>ACKA_BACSK (Q5WED5) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA +GG + M +PLAGV T++ + + ++ G +V E++ Sbjct: 212 SIAAVKGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQSVEEVV 263
>AQP7_MOUSE (O54794) Aquaporin-7 (AQP-7)| Length = 303 Score = 29.6 bits (65), Expect = 5.8 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -3 Query: 506 GNNWFWLMTLSPLAGVY 456 GNNW+W+ ++PL G Y Sbjct: 235 GNNWWWVPVVAPLLGAY 251
>TRUD_HAEI8 (Q4QML9) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine| isomerase D) (tRNA pseudouridylate synthase D) Length = 339 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/61 (26%), Positives = 31/61 (50%) Frame = -3 Query: 536 LVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDD 357 LV++ + +G N + LAG + W KA KE++ V V ++ + + + G+D Sbjct: 205 LVVAARIAKGATNQVLPNDIVQLAGSHSWFKADEKEDLTVLQVRLENQDILLTAPLIGED 264 Query: 356 V 354 + Sbjct: 265 I 265
>FAK1_CHICK (Q00944) Focal adhesion kinase 1 (EC 2.7.10.2) (FADK 1) (pp125FAK)| Length = 1053 Score = 29.3 bits (64), Expect = 7.6 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 31 CIXVSVIHIQTGYRYWNHLDLGAISNSRQKTSL 129 C + + H+Q+ +W HLD+G +SN R+K L Sbjct: 82 CYGLRLSHLQSEEVHWLHLDMG-VSNVREKFEL 113
>RPOB_PINKO (Q85X54) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1075 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 464 GVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 G W + SRK +I + ++LS G N+ EIL Sbjct: 166 GERIWARVSRKRKISIPVLLSAMGLNLEEIL 196
>ACKA_GEOKA (Q5KW66) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 396 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA EGG + M +PLAGV T++ + + ++ G E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGMTADEVI 263
>ACKA_BACHD (Q9K815) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 391 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = -3 Query: 527 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 SIA +GG + M +PLAGV T++ + + ++ G +E++ Sbjct: 208 SIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGQTANEVI 259
>ASPD_ARCFU (O28440) Probable L-aspartate dehydrogenase (EC 1.4.1.21)| Length = 236 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -3 Query: 431 EEIKVKMVLSDDGNNVSEILVRGDDVQVEQMRRELKMSE 315 +++KV++V + N+ EILVRG+ ++E R M E Sbjct: 173 KDVKVRLVADEVEENIHEILVRGEFGEMEIRVRNRPMRE 211
>KAPR_ASPNG (Q9C196) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 411 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/38 (50%), Positives = 22/38 (57%) Frame = +1 Query: 379 SDTLFPSSDKTIFTLISSFLDAFVQ*YTPAKGLKVISQ 492 S+ LF D F S LDA V+ PAKG+KVISQ Sbjct: 157 SNFLFSHLDDDQF---KSVLDALVEKPIPAKGIKVISQ 191
>ACKA_STAAW (Q8NW53) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G ++L Sbjct: 208 IGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVL 264
>ACKA_STAAS (Q6G8L6) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G ++L Sbjct: 208 IGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVL 264
>ACKA_STAAR (Q6GFZ6) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G ++L Sbjct: 208 IGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVL 264
>ACKA_STAAN (Q99TF2) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G ++L Sbjct: 208 IGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVL 264
>ACKA_STAAM (Q931P6) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G ++L Sbjct: 208 IGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVL 264
>ACKA_STAAC (Q5HF63) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 542 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 372 +G SIA +GG + M +PLAGV T++ + + ++ G ++L Sbjct: 208 IGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVL 264 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,811,747 Number of Sequences: 219361 Number of extensions: 1473372 Number of successful extensions: 3854 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3784 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3854 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
