ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal27e21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477279.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
2dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
4dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5gb|BT014485.1| Lycopersicon esculentum clone 133840F, mRNA sequence 56 2e-04
6gb|AC147007.17| Medicago truncatula clone mth2-26c3, complete se... 50 0.009
7ref|NM_128165.2| Arabidopsis thaliana EMB1345; nucleotide bindin... 48 0.037
8ref|NM_001036344.1| Arabidopsis thaliana EMB1345; nucleotide bin... 48 0.037
9gb|AY093154.1| Arabidopsis thaliana unknown protein (At2g26060) ... 48 0.037
10emb|BX821919.1|CNS0A8EG Arabidopsis thaliana Full-length cDNA Co... 48 0.037
11gb|BT003394.1| Arabidopsis thaliana unknown protein (At2g26060) ... 48 0.037
12gb|AY085277.1| Arabidopsis thaliana clone 142426 mRNA, complete ... 48 0.037
13ref|XM_709144.1| Candida albicans SC5314 putative DNA binding re... 44 0.58
14ref|XM_709104.1| Candida albicans SC5314 positive regulator of f... 44 0.58
15emb|Z32687.2|CAEFGTF Candida albicans EFG gene for putative tran... 44 0.58
16emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on ch... 44 0.58
17emb|AL731568.7| Human DNA sequence from clone RP11-367B6 on chro... 42 2.3
18gb|AC096748.1| Homo sapiens BAC clone RP11-400D2 from 4, complet... 42 2.3
19gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complet... 42 2.3
20gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, co... 40 9.1
21gb|U61950.2| Caenorhabditis elegans cosmid C45E5, complete sequence 40 9.1
22gb|AC150858.4| Bos taurus BAC CH240-431L22 (Children's Hospital... 40 9.1
23gb|AF181450.5| Homo sapiens chromosome 8 clone GS1-5L10 map q21.... 40 9.1
24gb|DQ177300.1| Homo sapiens isolate patient 18 GA chromosome der... 40 9.1
25gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, compl... 40 9.1
26emb|AL592427.6| Human DNA sequence from clone RP11-57F5 on chrom... 40 9.1
27emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 9.1
28gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 ma... 40 9.1
29ref|NM_068455.1| Caenorhabditis elegans C45E5.2 (C45E5.2) mRNA, ... 40 9.1
30gb|AC010136.8| Homo sapiens BAC clone RP11-129D2 from 2, complet... 40 9.1
31gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, co... 40 9.1
32gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete... 40 9.1
33gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, comp... 40 9.1
34dbj|D32089.1|OCTSINEG Octopus vulgaris gene, repeat sequence, cl... 40 9.1
35dbj|D32085.1|OCTSINEC Octopus vulgaris gene, repeat sequence, cl... 40 9.1
36emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on ch... 40 9.1 
>ref|XM_477279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1536

 Score =  391 bits (197), Expect = e-105
 Identities = 371/429 (86%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcaatccagtacattcccccgcagctcccacaatttcactgtgccgtcatcgctcgcgga 289
            |||||||||| ||||||||| |||||||||||||||||||||||| ||||| || || ||
Sbjct: 1263 tcaatccagtgcattccccctcagctcccacaatttcactgtgccatcatcacttgctga 1204

                                                                        
Query: 290  agccaacaccctcggatcctgaggacaccatctgacacagtttatatccatgtcatgtgc 349
             ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1203 tgccaacatcctcgggtcctgaggacaccagcggacacagtttatatccatgtcatgtgc 1144

                                                                        
Query: 350  cttctctttcttcagtattaatctgtaggaaggcccctcaaccatagtactcttctcctc 409
            |||||||||||| |  ||||||||||| ||||| |||||||||||| ||||||| |||||
Sbjct: 1143 cttctctttctttaaaattaatctgtatgaaggtccctcaaccatactactcttgtcctc 1084

                                                                        
Query: 410  ggcaaataaacagatagcatcatcacctgccccactggcaataatatcctcgcttgacca 469
             |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1083 agcaaataagcagattgcatcatcacctgcgccactggctataatatcctcgcttgacca 1024

                                                                        
Query: 470  atgggctgaaaaaatagttcgaccatgatatccagataatgtagaaagatgttgccaaga 529
            ||||||||||||||| || ||   ||||||||| |  |  |||||||||||| |||| ||
Sbjct: 1023 atgggctgaaaaaatggtccggttatgatatcccgtgagagtagaaagatgtcgccatga 964

                                                                        
Query: 530  ttcatgaccttctccagttgttggctgcgacaaatcaacactcgtatcccaaatcttcaa 589
            ||| ||    || | |||| |||| || ||||||||| |||| || ||||| || |||||
Sbjct: 963  ttcctggttgtcactagtttttggttgagacaaatcagcacttgtgtcccatattttcaa 904

                                                                        
Query: 590  agtacagtcgtcactgcatgtgaccattctatctcctttctggttaaaagatactgacca 649
             |||  ||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||
Sbjct: 903  tgtatggtcatcactgcatgtgaccatcctatcacctttctggttaaaagataatgccca 844

                     
Query: 650  tactgttga 658
            |||||||||
Sbjct: 843  tactgttga 835
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>dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E02, full
            insert sequence
          Length = 1536

 Score =  391 bits (197), Expect = e-105
 Identities = 371/429 (86%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcaatccagtacattcccccgcagctcccacaatttcactgtgccgtcatcgctcgcgga 289
            |||||||||| ||||||||| |||||||||||||||||||||||| ||||| || || ||
Sbjct: 1263 tcaatccagtgcattccccctcagctcccacaatttcactgtgccatcatcacttgctga 1204

                                                                        
Query: 290  agccaacaccctcggatcctgaggacaccatctgacacagtttatatccatgtcatgtgc 349
             ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1203 tgccaacatcctcgggtcctgaggacaccagcggacacagtttatatccatgtcatgtgc 1144

                                                                        
Query: 350  cttctctttcttcagtattaatctgtaggaaggcccctcaaccatagtactcttctcctc 409
            |||||||||||| |  ||||||||||| ||||| |||||||||||| ||||||| |||||
Sbjct: 1143 cttctctttctttaaaattaatctgtatgaaggtccctcaaccatactactcttgtcctc 1084

                                                                        
Query: 410  ggcaaataaacagatagcatcatcacctgccccactggcaataatatcctcgcttgacca 469
             |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1083 agcaaataagcagattgcatcatcacctgcgccactggctataatatcctcgcttgacca 1024

                                                                        
Query: 470  atgggctgaaaaaatagttcgaccatgatatccagataatgtagaaagatgttgccaaga 529
            ||||||||||||||| || ||   ||||||||| |  |  |||||||||||| |||| ||
Sbjct: 1023 atgggctgaaaaaatggtccggttatgatatcccgtgagagtagaaagatgtcgccatga 964

                                                                        
Query: 530  ttcatgaccttctccagttgttggctgcgacaaatcaacactcgtatcccaaatcttcaa 589
            ||| ||    || | |||| |||| || ||||||||| |||| || ||||| || |||||
Sbjct: 963  ttcctggttgtcactagtttttggttgagacaaatcagcacttgtgtcccatattttcaa 904

                                                                        
Query: 590  agtacagtcgtcactgcatgtgaccattctatctcctttctggttaaaagatactgacca 649
             |||  ||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||
Sbjct: 903  tgtatggtcatcactgcatgtgaccatcctatcacctttctggttaaaagataatgccca 844

                     
Query: 650  tactgttga 658
            |||||||||
Sbjct: 843  tactgttga 835
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                           
Query: 307     cctgaggacaccatctgacacagtttatatccatgtcatgtgccttctctttcttcagta 366
               ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |  |
Sbjct: 8514243 cctgaggacaccagcggacacagtttatatccatgtcatgtgccttctctttctttaaaa 8514184

                                         
Query: 367     ttaatctgtaggaaggcccctcaacc 392
               |||||||||| ||||| |||||||||
Sbjct: 8514183 ttaatctgtatgaaggtccctcaacc 8514158



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                           
Query: 390     accatagtactcttctcctcggcaaataaacagatagcatcatcacctgccccactggca 449
               |||||| ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| 
Sbjct: 8513784 accatactactcttgtcctcagcaaataagcagattgcatcatcacctgcgccactggct 8513725

                             
Query: 450     ataatatcctcgct 463
               ||||||||||||||
Sbjct: 8513724 ataatatcctcgct 8513711



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 230     tcaatccagtacattcccccgcagctcccacaatttcactgtgccgtcatcgctcgcgga 289
               |||||||||| ||||||||| |||||||||||||||||||||||| ||||| || || ||
Sbjct: 8514546 tcaatccagtgcattccccctcagctcccacaatttcactgtgccatcatcacttgctga 8514487

                                   
Query: 290     agccaacaccctcggatcct 309
                ||||||| |||||| ||||
Sbjct: 8514486 tgccaacatcctcgggtcct 8514467



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                       
Query: 603     ctgcatgtgaccattctatctcctttctggttaaaagatactgaccatactgttga 658
               |||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 8511402 ctgcatgtgaccatcctatcacctttctggttaaaagataatgcccatactgttga 8511347



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 462     cttgaccaatgggctgaaaaaat 484
               |||||||||||||||||||||||
Sbjct: 8512599 cttgaccaatgggctgaaaaaat 8512577
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>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                         
Query: 307   cctgaggacaccatctgacacagtttatatccatgtcatgtgccttctctttcttcagta 366
             ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |  |
Sbjct: 46711 cctgaggacaccagcggacacagtttatatccatgtcatgtgccttctctttctttaaaa 46652

                                       
Query: 367   ttaatctgtaggaaggcccctcaacc 392
             |||||||||| ||||| |||||||||
Sbjct: 46651 ttaatctgtatgaaggtccctcaacc 46626



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                         
Query: 390   accatagtactcttctcctcggcaaataaacagatagcatcatcacctgccccactggca 449
             |||||| ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| 
Sbjct: 46252 accatactactcttgtcctcagcaaataagcagattgcatcatcacctgcgccactggct 46193

                           
Query: 450   ataatatcctcgct 463
             ||||||||||||||
Sbjct: 46192 ataatatcctcgct 46179



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 230   tcaatccagtacattcccccgcagctcccacaatttcactgtgccgtcatcgctcgcgga 289
             |||||||||| ||||||||| |||||||||||||||||||||||| ||||| || || ||
Sbjct: 47014 tcaatccagtgcattccccctcagctcccacaatttcactgtgccatcatcacttgctga 46955

                                 
Query: 290   agccaacaccctcggatcct 309
              ||||||| |||||| ||||
Sbjct: 46954 tgccaacatcctcgggtcct 46935



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 603   ctgcatgtgaccattctatctcctttctggttaaaagatactgaccatactgttga 658
             |||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 43870 ctgcatgtgaccatcctatcacctttctggttaaaagataatgcccatactgttga 43815



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 462   cttgaccaatgggctgaaaaaat 484
             |||||||||||||||||||||||
Sbjct: 45067 cttgaccaatgggctgaaaaaat 45045
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>gb|BT014485.1| Lycopersicon esculentum clone 133840F, mRNA sequence
          Length = 1618

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                        
Query: 412  caaataaacagatagcatcatcacctgccccactggcaataatatcctcgcttgaccaat 471
            |||||||||| ||||| |||||| |||| ||||| ||||| ||  | || ||||||||||
Sbjct: 1037 caaataaacatatagcgtcatcagctgctccactagcaattattccttcccttgaccaat 978

                                                
Query: 472  gggctgaaaaaatagttcgaccatgatatccagata 507
            |  |||| ||||| || | | |||||||||||||||
Sbjct: 977  gaactgagaaaattgtcctatcatgatatccagata 942



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 330  tttatatccatgtcatgtgccttctctttcttcag 364
            |||| |||||| ||||| |||||||||||||||||
Sbjct: 1119 tttacatccatttcatgagccttctctttcttcag 1085
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>gb|AC147007.17| Medicago truncatula clone mth2-26c3, complete sequence
          Length = 122770

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 330   tttatatccatgtcatgtgccttctctttcttcagta 366
             ||||||||||||||||| || ||||| ||||||||||
Sbjct: 53854 tttatatccatgtcatgagctttctccttcttcagta 53890
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>ref|NM_128165.2| Arabidopsis thaliana EMB1345; nucleotide binding AT2G26060
           (EMB1345) transcript variant AT2G26060.1 mRNA, complete
           cds
          Length = 1353

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 423 atagcatcatcacctgccccactggcaataatatcctcgcttgaccaatgggctga 478
           ||||||| ||| ||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 968 atagcattatcgcctgctccactggcaataatgtcgtcccttgaccagtgagctga 913
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>ref|NM_001036344.1| Arabidopsis thaliana EMB1345; nucleotide binding AT2G26060
           (EMB1345) transcript variant AT2G26060.2 mRNA, complete
           cds
          Length = 1387

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 423 atagcatcatcacctgccccactggcaataatatcctcgcttgaccaatgggctga 478
           ||||||| ||| ||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 968 atagcattatcgcctgctccactggcaataatgtcgtcccttgaccagtgagctga 913
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>gb|AY093154.1| Arabidopsis thaliana unknown protein (At2g26060) mRNA, complete cds
          Length = 1279

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 423 atagcatcatcacctgccccactggcaataatatcctcgcttgaccaatgggctga 478
           ||||||| ||| ||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 933 atagcattatcgcctgctccactggcaataatgtcgtcccttgaccagtgagctga 878
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>emb|BX821919.1|CNS0A8EG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1241

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 423 atagcatcatcacctgccccactggcaataatatcctcgcttgaccaatgggctga 478
           ||||||| ||| ||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 942 atagcattatcgcctgctccactggcaataatgtcgtcccttgaccagtgagctga 887
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>gb|BT003394.1| Arabidopsis thaliana unknown protein (At2g26060) mRNA, complete cds
          Length = 1201

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 423 atagcatcatcacctgccccactggcaataatatcctcgcttgaccaatgggctga 478
           ||||||| ||| ||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 869 atagcattatcgcctgctccactggcaataatgtcgtcccttgaccagtgagctga 814
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>gb|AY085277.1| Arabidopsis thaliana clone 142426 mRNA, complete sequence
          Length = 1338

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 423 atagcatcatcacctgccccactggcaataatatcctcgcttgaccaatgggctga 478
           ||||||| ||| ||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 968 atagcattatcgcctgctccactggcaataatgtcgtcccttgaccagtgagctga 913
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>ref|XM_709144.1| Candida albicans SC5314 putative DNA binding regulator of filamentous
            growth (CaO19.610), mRNA
          Length = 1578

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 640  atactgaccatactgttgagga 661
            ||||||||||||||||||||||
Sbjct: 1248 atactgaccatactgttgagga 1227
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>ref|XM_709104.1| Candida albicans SC5314 positive regulator of filamentous growth
            (CaO19.8243), mRNA
          Length = 1650

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 640  atactgaccatactgttgagga 661
            ||||||||||||||||||||||
Sbjct: 1245 atactgaccatactgttgagga 1224
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>emb|Z32687.2|CAEFGTF Candida albicans EFG gene for putative transcription factor
          Length = 7292

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 640  atactgaccatactgttgagga 661
            ||||||||||||||||||||||
Sbjct: 5690 atactgaccatactgttgagga 5669
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>emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on chromosome 4, complete
              sequence
          Length = 208131

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 358    tcttcagtattaatctgtagga 379
              ||||||||||||||||||||||
Sbjct: 127204 tcttcagtattaatctgtagga 127183
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>emb|AL731568.7| Human DNA sequence from clone RP11-367B6 on chromosome 10 Contains the 5'
              end of the gene for CDA017 protein, a novel gene and a CpG
              island, complete sequence
          Length = 137034

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 344    atgtgccttctctttcttcag 364
              |||||||||||||||||||||
Sbjct: 126696 atgtgccttctctttcttcag 126676
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>gb|AC096748.1| Homo sapiens BAC clone RP11-400D2 from 4, complete sequence
          Length = 176749

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 511   tagaaagatgttgccaagattcatg 535
             |||||||||||||| ||||||||||
Sbjct: 14891 tagaaagatgttgcaaagattcatg 14867
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>gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complete sequence
          Length = 152996

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 462   cttgaccaatgggctgaaaaaatag 486
             |||||||||||||| ||||||||||
Sbjct: 32934 cttgaccaatgggcagaaaaaatag 32958
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>gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, complete sequence
          Length = 206936

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      atattgtatacaccaacagcccca 24
              ||||| ||||||||||||||||||
Sbjct: 205978 atattatatacaccaacagcccca 206001
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>gb|U61950.2| Caenorhabditis elegans cosmid C45E5, complete sequence
          Length = 27188

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tttggaaaccagaaacaaaa 151
             ||||||||||||||||||||
Sbjct: 11956 tttggaaaccagaaacaaaa 11975
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>gb|AC150858.4| Bos taurus  BAC CH240-431L22 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 166138

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   agaactataatcatattaca 213
             ||||||||||||||||||||
Sbjct: 96460 agaactataatcatattaca 96441
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>gb|AF181450.5| Homo sapiens chromosome 8 clone GS1-5L10 map q21.3, complete sequence
          Length = 123088

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 581    aatcttcaaagtacagtcgt 600
              ||||||||||||||||||||
Sbjct: 116175 aatcttcaaagtacagtcgt 116156
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>gb|DQ177300.1| Homo sapiens isolate patient 18 GA chromosome der(8) RUNX1/RUNX1T1
           fusion breakpoint region
          Length = 771

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 581 aatcttcaaagtacagtcgt 600
           ||||||||||||||||||||
Sbjct: 429 aatcttcaaagtacagtcgt 448
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>gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, complete sequence
          Length = 178929

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     atattgtatacaccaacagcccca 24
             ||||| ||||||||||||||||||
Sbjct: 23758 atattatatacaccaacagcccca 23781
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>emb|AL592427.6| Human DNA sequence from clone RP11-57F5 on chromosome X, complete
              sequence
          Length = 140691

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    aaataaacagatagcatcat 432
              ||||||||||||||||||||
Sbjct: 100221 aaataaacagatagcatcat 100202
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    cccacaatttcactgtgccg 275
              ||||||||||||||||||||
Sbjct: 279285 cccacaatttcactgtgccg 279304
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>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete
             sequence
          Length = 87080

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 423   atagcatcatcacctgccccactggcaataat 454
             ||||||| ||| ||||| ||||||||||||||
Sbjct: 39985 atagcattatcgcctgctccactggcaataat 40016
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>ref|NM_068455.1| Caenorhabditis elegans C45E5.2 (C45E5.2) mRNA, complete cds
          Length = 1410

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 tttggaaaccagaaacaaaa 151
           ||||||||||||||||||||
Sbjct: 908 tttggaaaccagaaacaaaa 927
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>gb|AC010136.8| Homo sapiens BAC clone RP11-129D2 from 2, complete sequence
          Length = 118522

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    atcaccaccatcctcttgca 95
             ||||||||||||||||||||
Sbjct: 80493 atcaccaccatcctcttgca 80512
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>gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, complete sequence
          Length = 194212

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   aatcttcaaagtacagtcgt 600
             ||||||||||||||||||||
Sbjct: 39717 aatcttcaaagtacagtcgt 39698
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>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence
          Length = 190066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   aaataaacagatagcatcat 432
             ||||||||||||||||||||
Sbjct: 28522 aaataaacagatagcatcat 28541
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>gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, complete sequence
          Length = 141016

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 634   taaaagatactgaccatact 653
             ||||||||||||||||||||
Sbjct: 61757 taaaagatactgaccatact 61776
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>dbj|D32089.1|OCTSINEG Octopus vulgaris gene, repeat sequence, clone:OR1-13
          Length = 2041

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   gatcaccaccatcctcttgc 94
            ||||||||||||||||||||
Sbjct: 1362 gatcaccaccatcctcttgc 1343
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>dbj|D32085.1|OCTSINEC Octopus vulgaris gene, repeat sequence, clone:OR1-13-2
          Length = 499

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  gatcaccaccatcctcttgc 94
           ||||||||||||||||||||
Sbjct: 197 gatcaccaccatcctcttgc 178
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>emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on chromosome 2, complete
              sequence
          Length = 223609

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 313    gacaccatctgacacagtttatat 336
              ||||||||||||||| ||||||||
Sbjct: 195625 gacaccatctgacactgtttatat 195602


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,042,103
Number of Sequences: 3902068
Number of extensions: 6042103
Number of successful extensions: 106430
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106317
Number of HSP's gapped (non-prelim): 113
length of query: 665
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 642
effective length of database: 17,143,297,704
effective search space: 11005997125968
effective search space used: 11005997125968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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